ID Class Order Superfamily Length Start End Strand View
R3_LTR-Caulimovirus_21 RetrotransposonsLTRLTR-Caulimovirus12380514438051565+
R3_LTR-Caulimovirus_22 RetrotransposonsLTRLTR-Caulimovirus218480515828053765-
R3_LTR-Caulimovirus_23 RetrotransposonsLTRLTR-Caulimovirus247580537678056241-
R3_LTR-Caulimovirus_24 RetrotransposonsLTRLTR-Caulimovirus73780666858067421+
R3_LTR-Caulimovirus_25 RetrotransposonsLTRLTR-Caulimovirus161680674488069063-
R3_LTR-Caulimovirus_26 RetrotransposonsLTRLTR-Caulimovirus41580690678069481-
R3_LTR-Caulimovirus_27 RetrotransposonsLTRLTR-Caulimovirus349885032328506729-
R3_LTR-Caulimovirus_28 RetrotransposonsLTRLTR-Caulimovirus31985067348507052-
R3_LTR-Caulimovirus_29 RetrotransposonsLTRLTR-Caulimovirus12961057712910578424-
R4_LTR-Caulimovirus_30 RetrotransposonsLTRLTR-Caulimovirus1211281101612811136-
R4_LTR-Caulimovirus_31 RetrotransposonsLTRLTR-Caulimovirus3111658407216584382-
R4_LTR-Caulimovirus_32 RetrotransposonsLTRLTR-Caulimovirus1531979911719799269-
R4_LTR-Caulimovirus_33 RetrotransposonsLTRLTR-Caulimovirus1442247027322470416+
R4_LTR-Caulimovirus_34 RetrotransposonsLTRLTR-Caulimovirus1982247204922472246+
R4_LTR-Caulimovirus_35 RetrotransposonsLTRLTR-Caulimovirus50773337654633381622+
R4_LTR-Caulimovirus_36 RetrotransposonsLTRLTR-Caulimovirus6953338175633382450+
R4_LTR-Caulimovirus_37 RetrotransposonsLTRLTR-Caulimovirus3203834060138340920+
R4_LTR-Caulimovirus_38 RetrotransposonsLTRLTR-Caulimovirus17393834092538342663+
R4_LTR-Caulimovirus_39 RetrotransposonsLTRLTR-Caulimovirus9944518795045188943+
R4_LTR-Caulimovirus_40 RetrotransposonsLTRLTR-Caulimovirus1744520407445204247-

< 2 3 4 5 6 > Total 33


Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

123

Start:

8051443  

End:

8051565

Strand:

+

>R3_LTR-Caulimovirus_21

TGGTTCGACCTCAATCTTCAACGAAAAGCCAAAACAAACATGATCAAAACCAAGGAGGCAGAAGGAGACTGAATTTCAAGCCAACCCACCAAAAAGACGAACTCTTACGTCATCATCCAGCCA

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2184

Start:

8051582  

End:

8053765

Strand:

-

>R3_LTR-Caulimovirus_22

CTTTTGCTTTTTGGAAGGGTGGAGATTGCAAATTGGGAATCGATGGATGAAGGTTGTGAGGCAGACATCATTAAGAGAGTTGTTCTCCAGAACACTCAAAAATAAACAACGATTCTATCATCCAGAACTCAAGATGATGGCTCTGATACCAATATAGGATATTCTGTTCATAAACCGATCTCGTCGTGTTGACAAAGTCGTATTGGCGGACGAGCTCGGTGATTTACAGGTAAAGGAAGTGATTTGGGCACTACTACGGCCTTTTCGATCAAGCTCAACCAGTGTTAAGAAATCACCTCCCCCGAATGTCGTGTTGACAGAGTCGTATTGACATAAACCGATCAAGAAGAATCACAGCTAATAATTGGATCGCATCTTGAGTATGGAAGATCGAAATCAGAGCTTATCAAAGATGAGATAATGTCTGAAAAACTTGAGAACTTTAGAGAAACATTAGAGAGAGGTTTTTTTAATGAAATTATTTGATGATATTTCACAAGGGGGTACACAGATATTTATAGATGAGGATAAGGCGCTGACATAAGCGCTTACCTCATTGCTTGCATCATGCTTACATAGCGATTACATCATCGCTTGCATCATGCTTACATAGCGATTACATCATCGCTTTATTTATTTGAAGCACACATATTTTACATAATTATACATTTATAACTGATGGCTTGTTTAATGTCGATCTCGAACTTGATGATATGCTTATCGCAGCATCCGTAGTATTCCCCTTCATATTCTTCAATTATGTTTGAGGAATCGTCGTTGATTCCGATGTTGAACTATTTTCCTATTTCGTCGATATTCATTTCATCATCTGGGAGTTGCGCGTCTTGAAAGTACTCTGGAAGACATTCTTGGGGTTGCTCGTTTTCTTGCGTTTCTATGGGTCTTTTCTTCTGGAGCTATAAATTGGCTGGCGGAGAAGCAGGTTTTTCCGTATAGAATTGGAGGTCTTCATCGAGGTTCATTTGGTAATCTATTGGGTAATAGATCCAGTTTGGGGTAAAAGGAATAGGGAACATTTGTCTTGCATTGTTGAGACGGAATGCATGGGTTTGGAAGTCTTCGTAGGCTTTGGTGTCGTTGAGGTTAAAATAAGGTCTAACTCCTCTCTGATAGTCGTTGTGGTGGATGAGAGTAGGTAGGACATGGATTTTTCCTATTTTGCTGTTGACTTGGACATGACGGTGAAAGAAATATATGGTGTGAGGGTTGAAAAAGGGGTTGAGACTTCTTCGGCTTCTTAATTTTTTGAACGGTAAACCAGTCGCTTTTGCTGATTTTCTCAATTTACCGTTCCAAACAGATAACGGCGCGAACCATGTTAAGAAAGTGGAGATGCATTCGTTGTCTCCTCAAAAAGGGTCGTAGAAATGGGGATTGATGTATTGATACAGCCATTGAATATCAAAAGTGATACCGATGGTGTAGGTTGAGCAAAGGTACCAGAGGAAACAAATGACTTCTTCTGGCATATAGGTGTTTTCGATTCTGTAGAGATGTGCAAACGGGAAATCAGGATGAATTCCCATTGGACTGATAAAGTGATTGCCAGGTCCATACTTCAACATAATGATTGATTGGTAGTGGAAGATCTTGTAGCTGAGACGTTCATGTAGAGTGTTCTTGTTGATGAGTTCATGGGCCTCTTCAGGCATGTTGGCTGAGAAGTTATAGTAACTTTTTGTAGAAGAGCTCTCCATTATGTGTATTTCTTTCGGAGGATTTCTACTGAACATATCAGCTAGGGTGTTCTTCGAGCCCTTAAAATAGTCGGATTCGAAATCATACTTCGAAAACCATTCGCTTCATCTCAATAAGTATTGATGTGGGACCATTTTCTGCTTGAACTGTAACATCTTTAGAAAAGATGACATATCCATTTCGATTCAATATTTATGTCCAATCAGATAGAACTCGAACTTCTCGATAGCCTTCTTGACCGCCAATATCTCTTTGAACGTGGAGTGATAATGCATTTCGGAATCTTTAAAGCGTCTGCTTCTGTATCCACAGATTTGACGTTTCTCATTTATTTCTTCAAATAAAATAGCTCCCCATATTTATCGCTTGCATCAGTCTGCAAAATGCGCGTTCATGTGGAAGGAATTTTTAAAGGCGGTAGCCTCTGCACCTCTATTTTTAGGTTTTTGAGTACCTCGGTTTGTC

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2475

Start:

8053767  

End:

8056241

Strand:

-

>R3_LTR-Caulimovirus_23

ATTGTGGTGGATTCTTATCGTTTGAATAGTTTTTTGTCGGGAAATTCGAGAAGCGTCGTTGCTAAATGGCCTTGTGGTGTAAAATTGCCATCTTTTATCTGCATTCCAAAGAATTCAATGTTGGGCTGGGCTATAACCATTTTGTGGGCCGAGACCATAATTCCATATTGTAAGACGATACTTTGAAAATGCTGAAGAAGCTGTACATGCTCTTTTTCATTTGTTGAGAACAACATGATGTCGTCAATGTATAACAAAGCTGATTTGAGAAGATGCTTAAATATGCGTAGCATTGCCTCCTGAAACAACGATGGTGCCATCTTCAGACCAAAAGGTAGGACATTCCATTGAAAGTGCCGATTTGGTAAACAGAATGCGGTCTTTTTTTTTCTTCTGGTTGAACTCCAAGTTGCCAAAATCCAGACTTAAGGTCAAACTTTGAGAATATCGTTGCTCCTTGAAGGTGTGGGAGAATCGTTTTTTTGTTTGGTAGGGGAAACTTGAAGTCTTGGAGGAATTGGTTCAGTGGCTTGTAGTCAATTACTAGCCTGAGTTTTCAAGTGAGTTTTCCTCTTGCTTTCTCTGTACGGTTTTTGACGTAGAATGCTTTCCATGCCCACGGAAAAGTTGTGTTTGAGACTACTCCTTGCTCGACCAATTGAACGCATTCGTCATTTGTTTGCTTTAGAAGATTCGGTGGCATTCCTGCGTGACTTGCTTTCGTTGGTGTGGTGAGAACGTTTTCTTTGAACGGTAGCGAAACAAAGAACTGGGAGTTAAGCCACAACGGACTGTTGCATTTCTGAAGGAAATCTATATGAGACTCTGCACATGAAGATTTTTTCATTTCTTCTTTGATTTTTGCAAACTCTTGAGAGACCAATTCTTCAACTGCGAAAATTCGTGGTACTGTTGTGAAGGATTTGTAGAAATTCTTCCACCGTACGCCCCCTGGTTCGATCAAGATGTTAAATGATTTTTTGAGAGCGTAATACGAGTCCCATCCCAATATTACGTCTTTGTCTGGTGCTGTTGATCCAAGGACTTTAGTCGTGATTCGTCATCCTGGGAAGAGCTCAATCATAAATGTCTTTGATTTAGCTTAATGGTTAATGATCCGGAATTCGCCACACGGGATTCTTGTTGATGAGGTAAGCACATAGAAGACGGGAGAATCTTCGGATTTATTATCTTTGTGTGGGCTCCAATGTCTATTAATGCGATGGCATGGACTGGATCTTCTTTTCGAGCCGGATCGAAAATTATCACAGGAAGATGCAGAGGTTGTATTTCTTGTTGTTTTGGAATTTTTGTGATTTTGAAAAAACAGTCTTCACTTTCATCTGAAGACGATTCAGAAGAGTCGTCAGAGTCTGAGTATCCACAAAAGGCTTCGTTGTCATCACTATCGTAAGATAGAACTGATTCCAAGTCGTGGTTGTCGAGATCAATATCTGGTGCGATATTTGATATCGAGCCGATCAAGTATTGCTTCTTTTTGTTCGACTTGTTAGGAAAATTCTTTGCATAGTGTCCTTCTTTTCGACATAGAAAACATCTTGTTGACTTCTTGAAGCTTTTTTCTTTCGGAAAAACCTTGTACGTATAAAATTAGGAGAATGTTTGGAGAAAAGCTTTTTCAACTTCTTGCGCTTTCCATAAGAATTGCAAGAACATGATTTCTTGGGTTTCGAGCATATGATCGATAGATCTGGCCTGGCACATATTTTTGATAGCTGTTTTGAACAATCCATAAATTCAATCCAGAACTCCTTTTGCTTGCAAAGTTTGTCGAGCGTTCCGAAGACATGCAGCTGGATCTAACAAATGGAGATTTCTTCGATTGTTTGTCCTTGATCTCTGATATACAACTTAGTTTGCTGAGTGCTGACTAAGATAATCATCAATAGATGAGAGATAGACGTGCTTCAGGCTTGGGTTGTTGAGTCCGGTTATCGCATAATATCTCCGTGTTTGTCTTTCAAAATGTTTTGTGAGAACTTTTTTTTGCAGAGAACCACATTTTGCTGAGAAGAATTCTTCTTGGATTTGCTCCTTTTTTATGTGTCGGAGTGCCAATGAATTCTCTGTGAATTTCACCTAGAAGCAATGGAATTGTCGTCTGATAGACTTGTTGTTGTCTGTATTCTCCGAGGGAGTTCCACCATTCTTTAAGCGCGCCGGGTAGTCTTGCCGTGAATTGTTGAATTACCAAATGTAGAGGAGACGTAATGGCTTACGAGTTCATCCATGCATGAAATTTATCTAAACGGTCATTCCATTTGTCAAAGGGAATGTCGTCGAACGTAAACACCATGACTTTCGAAGAAAAATGTTTATTGCGATTTTCTTCTTTTGAAGCTTCATAATTCATATCTTCATCACTTGAATATACTTCGTTAATATTTGGCTCTTATTTAGGAGTACTTGATCCTTCTCCAATCATGAACTGCTTTGGGAGTGATTCTTCATCTG

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

737

Start:

8066685  

End:

8067421

Strand:

+

>R3_LTR-Caulimovirus_24

CTCAGTTGAAGAATTGGTCTTTCAAAAGTTTGCAAAAACAAAGAAGAAATGACAAAATTTTTATGTGCAGAGTCTCATACAGATTTCCTTCAGAAATGCAACAGTCCGTTGTGGCTCAACTCCCAGTTCTTTGTTTCGCTACCGTTAAAAGAAAACGTTCTCACCACACCAACGAAAGCAAGTCACGCAGGATGCCACCGATTCTTCTAAAGCAAGCAAATGACGAATGCATTCAATTGGTCGAGCAAGGAGTGGTCTCAAACACAACTTCTCCATGGGCATGCAAAGCATTCTACGTCAACGACCGTGCAGAGCAAGCAAGAGGAAAACTCAGGTTAGTAATTGACTACAAGCCACTGAACCAATTCCTCCAAGACTTCAAGTTTCCCCGACCAAACAAAAAAGCGCTTCTCCAACACCTTCAAGGAGCAACGATATTCTCGAAGTTTGACCTTAAGTCTGGATTTTGGCAACTTGGAGTTCAACCAGAAGAAAGATACAAGACCGCATCTTGTTTACCAAATCGGCACCTTCAACGGAATCTCCTACCTTTTGGCCTGAAGACGGAACCATCATTGTTTCAGGAGGCAATGCTACGCATATTTAAGCCTCTTCTCGAATCAGCTTTGATTTACATTGACGACATCATGTTGTTCTCAACAAATTAAAAAGAGCATGTACGGCTTCTTCAGCATTTCCAAAGTATCGTCTTACAATATGGAATTATGCTATCGGCC

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1616

Start:

8067448  

End:

8069063

Strand:

-

>R3_LTR-Caulimovirus_25

GATGTAAAGACTTCATCGGAGGATAGAAACCTGGGTAGTGGTGCTATTGTCTTCTGGGTTTGGTAGCCTGAAAGAGATATTGGAGAGTAGGATCCTTGGTACATCGGTTGTTTCTGATGATGTACTCCATAAAGGGTTAAAGTAAGAATCCTTCTGTCGTTGATTGTAAATCATACTTTCTAAGCTTCTTTGGAGATCTTTTAGTTGACTTTTGAGGCTAGCCGTTTCTATTTTTTTGAGTCGTGTCAACCATCATGTGTTTTGCTAACGTCATCATTTCTTGATGAAGACTGTTGAGCCGACCATGTATCTCTGTTATTGAGTTTTGAAGGCTTTATTGTCTTTTATTAATTCCTTCAGTCATCTGATCAACCTTTTGATTTAACGCTGATAACATATGATTTTGAGTAAGGGAATTTTCCGTTTGCCAATTCAAGACTTACTCTGCTTGGCTAAGTTGAACTGGTCCAGAAGAGCGTACTGCTGTAGAAAGAATCTTCGGGGTGTGAGCGATGTCGTATTTGATGAAATCTTCGGGTGGAGGGAAGTTGTTCAGACTAATCATCAATACTTCGTGTGATGGTTCTTTCTTCACGTCGAGGTATTCGACTATAATGTCGTATTTTTCATTGCCTAACGGACCAACAGAAGGATCTCCGTCGAGATACCTCTTGTAGAGAGGGTCTTTTTTCTTTCTTCTTCGTATTCATTTTTCATCATCGGATTCGTAGCTCCAAAAAGCGTATGAACATGCAGTGCAATTGCAGACGTCAAAGCGGCAATGTCCATCGTCATCTATGAAAGGATAGACTATCTCTCCATCCTTGTCGAAATGGCAGGGCCTGAGGATATCTTGTTTCTGAGCTGGACCGTAGAAGTCTCAGTCGTTGACTTGGATGGCAAATTGAGTGAATAATTTCTTTCTGAATGATGACGATCTTGGTTTATCAAACTTGATATCCGTTGTTCCATCTTTGTGTGAATGAAAGCTGACTTCTGAGGATTGTATGGGCGATCGAGTGGCTTGATGAAGCTTTTCATAGCTCGTCACCCAAAATTCTGGTAGTCGTCATATCAGTTCTTCGCGTGATATTTGTCTAGGAATCTGTATTGAATTGGGTGCCTGAGATGCTGATGTGACTTCGAGATATAGGTCTTCGTCAGATGAAGGTAATACAAGATCGAAAGCGTGATCTTGAATTCGAGAGACGATCTAGTGATGTAGGGTAGCTGCAACACTCTTTTCTTGCATAGGTGCTCCGATCAGTTGTAGATGAACTTTGAGTGTCTTCAATAGGTTTGTATCTTGCAATGAAACATTAAAGTTTGGATAAAGCGTTACGAATACTGTTCCTGCATTTAATGTCGTTTGAACTATTCCGATACATGCTTAATGATAAGACTTTAATCGATTGGTAGACCTTTTCTGGTGTGTAAGATCAGACCAATTCTTACTACACCGAAGTGGAGATGAGTGTAGCCTTGCTGCTGCCATAATCTGGGTAGGTGTTCCGGAATGTTCAACGAAATGAACTGTTTGTCTTCAGTAGCGTGGACTTGGCAAGATGAAAATTTGCTGGACTGAACATACTCCATAACCTTTCGGTTAGAGGATG

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

415

Start:

8069067  

End:

8069481

Strand:

-

>R3_LTR-Caulimovirus_26

TGATGAGCTCACGAATGCCTTTAACAGAGAAGGCGCTAGGCTTTTTTGTAAAATATTCATATGGATTTACTAGAGTAAAGGTGGTTTTGGGTAACTTGTCACCCGAAATATATTCTATTTCATAAAGGGAATTTATAGTGGAAGAAGAGGAAGAGTGGCTTTTGCTTTCTGGAAGAGTGGAGATTGCAAATTGGGAATCGATGGATGAAGGTTGTGAGGCGGACATCATTAAGAGAGTTGTTCTCCAGAACACTTAAAACACTCAATAATAAACAAAGATTCTATCATCCAGAACTCAAGATGATGGCTTGATACCAATATAGGATATGCTGTTAATAAACTGATCTCGTTGTGTTAACAAAGTCGTATTGGCAGACGAGCTCGGTGATTTCCAGGTAAAGGAAGCGATTTAGGC

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3498

Start:

8503232  

End:

8506729

Strand:

-

>R3_LTR-Caulimovirus_27

AAAGATTCTTCCACCGTATGCCTTCTGGTTCGATCGAGATGTTGAATGATTTTTTGAGAGCGCAATACGAATCCCATCCTAATATCACGTCTTTGCCCGGTGCTATCGAACCAAGGATTTTGGTTGTGATTCGGCATCCTGGAAAAAACTCAATTGTAATTGGCTTTGATTTGAGTTTGATGGATAATGATCCAGAATTTGCCACACGAAACTCTTGTTGATGAGGTAGCCACATAGAAGACGGAAGAATCTTCGGATTTATTATCGTCGTGTGGGCCTCAGTATCTATGAATGCGATGGCATCGACTGGTTCTTCTTGATGGGCCGGATCAAAGATCTTCACCTGAAGATGTGGAGGGTATTTTTCTTCTTGTTTCGGTATCTCCGTGATTTTGAAACAGCAATCTTCGTCTTTATCGGGGGATGATTCAGAAGAATCATCAGAGTCAGAGTATCCACAAATGGCTTCGTTGTCGTCACTGTAATAAGATAGAACTGATTCCAGGTCGTGGGCGTCGATGTCAATATCTGGTGCAATTTTTGATATCGAACTGATCAGATACTGCTTCTTCTTTTTTGATTTGTTAGGTCAATTCTTAGCATAATGTCCTTTTTTCGACACAGAAAGCACATTGTTGACTTCTTGAAACTTCTTTTCTTTCAAAAGAATCTTTTGCGCCTAAAGGTTGGTGAGTATTTTGAGAAACGCTTTTTGAATTTCTTGCGCTTTCCATTCAAATCACAAGAGCATGATTTCTTGGACTTCGAGCATTTGATCGATAGATCTGGTCTTGCACATATTTTTGATAGTTCTTTCGAACGATCCATAAACTCCATCCAGAACTCCTTCTGCTTGCAAAGTTTGTCGAGAGTTCTGAAGACATACTGCTGGATTTGACCAATGGAGATTTCTTCAATTGTTTGTCCTTGATCTCTGATGTACAACTTAGTCTGCTGACTAAGATAATCATCAATAGACGATAGATAGACATGCTTCAGGCTTGGATTATTGAGTCCGTTTAGTGCATAATATCTTTTCGTCTGTCTTTCAAAATGCTTCGCAAGATCTTTCTTTTTTAGAGAACAACATTTTGCTGAGAAGAATTCTTCTTGAATTTGCTCCTTTTGATGTGTTGGAGTGCTAATGAATTCTCTTTGGATTTCTCCTAGAAGCAATGGAATTGTTGTCTGATAGACTTGCTGTTGTCTGTATTCTCCGAGGGAATTCCACCATTCTTTAAGTGCGCCAGACAGCCTCGCTGTGAACTGTTGAATCACAAAATGCAGGGGAGACGTAATGGCTTCTGAATTCATCCAACCGGTCATTCCATTTGTCGAAAGGAATGTCGTCGAACGTAAACACCATGACCTTCAAAGAGAAGCGCTTATTGCGAGTTTCTTCTCTTGGAGCTTCATAATTCATGTCTTCTTCACTTGAATACACTTCATTGATATCAGGCTCTTGTTTAGGAGTACTTGATCCTTCACCAATTACAAACTGTTTTGGGAGTGATTCTTCATCAGAATCTATATCGTACTCACTGGAGCTTGAGTCTGAGAAGTGCTTGATGTTGACGACCGGTGAGGGTTGAGGCTATTCTTGAGGAACTGGTTGATGCTCCGGTAGTTCGACGGTTTTGACAAGATTATCTAGCAAACTAGACATCGAAAATTCGATGATGCCGATATCTTTTCCTCTGTTGTCCACTGACTCATGACTAGACGAAGACGTAAGAGTTGGCCTTTTTGGTGGGTTGACTTGAAATTCAGCTTCTTTCTGCCTCCTTGATTTTTATCTGGTTTGTTTTGGCTTTTCGGTGAAGATCGAAGATGAGCCATATCTTGATGTAAAGGCTTCATCGAAGGATAGAAAACCAGGTAGTGGCGATCTCAATTTTGGGGTTTGGTAGCCCGAAAAGAATCCTGGAGAGTATGATCCTTGGTACATCGGTAAATCTGTCGATGTACTCCCCAAAGGGTTAAAGTAAGAGTCCTTTTGTCGTTGACTGTAGATCAGACTCTCTAAGCTCCGTTGGAGGTCTTTTAATTGATTTTTGAGGCTTGCCGTTTCTGCTTCTTTGCTTCAAATTGAGTCGTGTCAACCATCATGTGCTTCACCATCGTCATCATTTCTTGATGGAGACTGCTAAGCCGCCCGTGTATTTCTGTTATTAAGTTTTGAAGGCTAAGATGTCTTTTGTTAACTCCTTCAGTCAGCTGATCAACCTTATAGTTTATTGCTGTTAACAGATAATTCTGAGCAAGAGAATTTTCTGTTTGCCAGTTTAGAACCTTTTCTGCTTGGCTAAGTTGAGTAGGTCCAGAAGAACCTATTGCTGCAGAAAGGAATTTTGGGGTGTGGGCGACGTCGTCTTTGATGAAATCTTCTGGCGGAGGAAAGTTGTTTGGGCTGATCATCAATAAGTCTTGCTCTGGTTCTTTCTTTGAGCTGGGATATTCGACTATAAAGTCATACCTATCATCGCCTAACGGACCAACAGAAGGATCTCCTTCGAGATACCTTTTGTATAGAGGGTCTTTTTTTTTTCTTCTTCGTCTTCGTTTTTCATCGTCGGATTCGTAGCTCCAGTAGGCGTCTGAACAGGCTGTGCAATTGCAGATGTCAAAGCGGCAGTGCCCATCTTCATCTATGAAAGGATAGATTATACTTCCGTCTTTATCAAATTGACAGGGCCTGGGGATGTCTTGTTTCTTAGCTGGGCCGTAGAAATCTCTTCCGTCAACTTCGATGGCAAATTGAGTAAATAATTGCTTCCTGAATGACGAAGATCTTGGTTTTTCAAACTTGATCTCCGTTGTTCCATCTTTTTGCGAATGAAAGCTAACGTCTGAAGATTGAATTGGCGATTGAGTGGCTTGATGAAGCTTCTCGTAGCTTGTCACCCACGACTCCGGTAGTCGTCTTATCAGCTCTTCGCGTGATATCTGGCGAGGAATTTGTATCGAATTTGGTGCCTGAGATGCTGATGTAACTTCGAAATATAGGGCTTCGTCAGATGAAGGTAGTACAAGGTCGAGAGCGTGATCTTGAATTCGGTAGACGATCTGATGATGTAAAGTGGCTGCTACACTCTTCTCTTGCATAGATGCTCCAATAAGTTAAAGTTGTACCTTGAGCGTCTTCAACAGATTTTGATCTTGTAGCGAAACATTAAAGTTTGGAAACAGCGTTACGAATACTGTTCCTGCATTTAATGTTGTTTGGAATGTTCCGATACATGCTTGTTGATATGACTTTAATCGGGAATCGATTAAAGCTATCCTAGCAATGACCGGTAGACCTTTTCTGGCGTGTAAGGTCAGATCAATTCTCACTATACCGAAGTGGAGATGGGTGTAGCCTTGTTGTTGCCATAATCTGGATAGGTGCTCTGGAATGTTCAATGATATGAACTGTTCTTCTTCTGTGGCTGGGACTTGGCAAGATGAGAACTTGCTGGATTGAACATATTCCATGACCTTTTGGTTAGAGGATGG

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

319

Start:

8506734  

End:

8507052

Strand:

-

>R3_LTR-Caulimovirus_28

ATGAGTTCACGAACGCCTTTAACAGAGAAGGCGCTAGGCTTTTTTGAAAAGTATTCATATGGATTTACTAAAGCAAGGGTTGTTTCTGGTAACTGGTCACCTGGAATATACTCGATTTCGTAAAGGGAGTTTATAGTGGAAGAGGAAGAAGAAGAGCGGCTTTTGCTTCTAGGAAGGGTTGAGATTGCAAACTGGAAATCGATTGAAGGAGGTTGTGAAGTAGACATCATTAAGAGGGTTGTTTTCCTGAACACTCAAAACATTCATTAATAAACAAAGATTCTATCATCCAAAACTCAAGATGAAGGCTCTAATACCA

Raphanus sativus (v1.0)

ID:

R3_LTR-Caulimovirus_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1296

Start:

10577129  

End:

10578424

Strand:

-

>R3_LTR-Caulimovirus_29

TCTTGTTAATGAGACAGTCAAATAGATGGTGAAAGAATCTTGGTATTCATCATCATTGTATGGGTTCTAGTGTCAATGAATGCAACACTGTGAACTAGGTCTTTTTGACAAGATGGGTCGAAGATTGTCACAGGCAATTGCGGGATTTGAATCTCTTCATCTCGCAATATTTTTGTACTCTTAACACAACAGTTTTATCTTCATCGAGAATAACTCGGAGGAATCATCGCATTCGAGTAACCACAAATGGCATCATTATCGTCACTATCATAAGATATGACTGATTCCAGATCATGGTCGTCGAAATCGATATCTGGTGCGATTTCGGATATCGAGTTGATCAGATACTGTCTTTTCTTTGCGGATTTGTTTGGACATTTTTTGCAAAGTGCCCTTCCTTCTGGCACAGGAAACATTTCGTTGCCTTTTCGAAGCTTTGTTTCTTTCGAAAGAATTTCTTGCGCCTAAATTTGTTGGGGTGTTTGGAGAATCGTCTTTTGAATTGTCGCACTTTTTCATGTGTATTGCACGAGCATGCTTTTTAGACTTTGAACACTTGATTGATAAATCTGGTCTGGCACATACTCTAAATAGTTGCTTTGATCTATCCATGAACTCTATCCAGAATTCCTTTTTCTTGCAGAGTTTATCCAGCATTCTGAAAATATATTCTTGGATCTGACAGATGATTTTTTTTTTCGATTGTTTGTCTTTAATCCCTGATGAATAGCTTAGTCTGTTGACTAAGATAATCATCAATGGAAAAGAGATAAACATGCTTTAAGGCTGGATTATTAAGGCTGTTAAGCGTGTAATACCTCTTTATTTGTCTTTTGAAGTGTTTCGCAAGATCTTTTTTTTTTTAGTGTGCAACATTTTGCTGAAAAGAATTCTTCTTCCGGTGAATTTTCTGTAAATTTCTCCAAGAAGCAACAGTATCATTGTCTGGAAGACTTATTCCTGTCTATATTCACAGATAGAATTCCACCATTCTTTAAAGTGCACTAGATATTTTTTGTAGTGAATTGTTGGATCACTAACTGCAAAGGAGATGTGATGGCTTCTGAATTCATCCGGGCATGGAATTCATCTAGACGGTCATTCCATTTATCAAAGGGAATGTCATCGAACGTGAAGATCATAAATTTTGAAGCAAAATGCTTATTTGGTATCTCTTGTTTCGGAGGCACATAATTTATTTCTCCATCACTTGAGTAGACTTTATTGATACTTGGCTCTTTCTTTAGAGGTGTTTGAACCTTCTCCGACTACAAATTGTTTTGGTAGAGATTCGTC

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

121

Start:

12811016  

End:

12811136

Strand:

-

>R4_LTR-Caulimovirus_30

TATATCATCTATATATACTGAGCTGAATTCTTCATATCCGGTTAAATTGTTATTCATAAATTGTTGAAATATTCATTGGGTTTGTTTTAACCCAAACGGTAATACATTCCACTCAAAGTGT

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

311

Start:

16584072  

End:

16584382

Strand:

-

>R4_LTR-Caulimovirus_31

GTCGTGTTGACAAAGTCTTATTGATCAGACGGGCTTGGGGATTTTCCAGGTATAAGGAGCGATTTAGGCACTACCTCGACCTTTTCGATCAAGCTCAACCACTGTTAGGATAATCACCTCCCCGAAAGTCGTGTTGACAGAGTCGTATTGACGGAAACCGATCAAGGAGAATTACAGCTAAGAATTGGATCGCATCTTGTGTATGGAAGATAGAAATCAGAGCTTATCAAAGATGAGATAAGGTCTGGAAAACTAAAGAACTTTAGAGAGACATTAGAGAGAGAAACTTAGAGAGAAGTTTTTATGAAATT

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

153

Start:

19799117  

End:

19799269

Strand:

-

>R4_LTR-Caulimovirus_32

ATCCTTTTCATCATATTTTGTGAATATTATTATATCATCTGTATATACTGAACTGAATTCTTCGTATCCGGTTAAATTGGTATCCATAAATTGTTGAAATATTCATGGGGCTTGTTTTAACCCAAACGGTAATACATTCCACTTAAAGTGTTT

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

144

Start:

22470273  

End:

22470416

Strand:

+

>R4_LTR-Caulimovirus_33

AGGTGTTCCTGGTGGTAAGTCCTAAAGGTAGTGAGTCTGTTGGTAAGCCGTTGTTTTGTCCTCGTTAAGATAGGTTCGTTTGTATTTTACTTTGAGTCAAAGTACAATTTAAACGATATCTTTAATCAGGAAATGGTTAAAATC

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

198

Start:

22472049  

End:

22472246

Strand:

+

>R4_LTR-Caulimovirus_34

AAACTATATCATTACAAAATGAGTTTAAATAAACTGAATTATTATTTTCTATGGCCTAAGAATAGTATAGAAGAAAAACTTTAATAATATTCATTTTGGATTAATACAAATAGCAATCAAATATTTCTCTAGGACGTGGATTGATTCTCAAATACTTATGTTATTAAAAGATAAAAATCTTCCAAAATTTGAATACTC

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

5077

Start:

33376546  

End:

33381622

Strand:

+

>R4_LTR-Caulimovirus_35

AGTTTGAAAAACCAAGATCTTCGTCATTCAGGAAGCAATTATTTACTCAATTTGCCATCGAGGTTGACGAAAGAGATTTCTACGGCCCAGCTAGGAAACAAGACATCCCAAGGCCCTGTCGATTCGATAAAGACGGAAGTATAATCTATCCTTTCATAGATGAAGATGGACATTGCCGTTTTGACGTCTGCAACTGCGAAGCTTGTTCAGACGCCTACTGGAGCTACGAATCCGACGATGAAAAACGGAGACGAAGAAAAAAGAAAAAAGACCCTCTATACAAAAGGTATCTCGAAGGAGATCCTTCTGTTGGTCCGTTAAGCGATGGTAGATATGACTTTATAGTTGAATACCCCAGCGCAAAGAAAGAACCAGAACAAGACTTACTGATGATCAGCCCAAACGACTTTCCTCCACCAGAAGATTTCATCAAAAACGACGTTGCTCATACCCCAAAAATCCTTTCTGCAGCAATAGGTTCTTCTGGACCTACTCAGCTTAGCCAAGCAGAAAAGGTTTTAAACTGGCAAACAGAAAATTCTCTCGCTCAGAATTATCTGTTAACAGCAATAAACCAGAAAGTCGATCAACTGACTGAAGGAGTTAACAAAAGGCATCTTAGCCTTCAAAACTCAATAACAGAAATACACATCCGGCTCAATAGTCTCCATCAGGAAATGATGACGATGGCGAAGCACATGATGGTTGACACGACTCAATTTCGAAGCAAAGAAGCAGAGACGGCAAGCCTCAAAAATCAATTAAAAGACCTCCAACGGAGCTTAGAGAGTCTGATCTACAGTCAACGACATAAAGACTCTTACTTCAACCCATTGGGGAGTTCATTGACAGATTTACCGATGTACCAAGGATCATACTCTCCAGGATTCCTTTCGGGCTATCAAACCCCAAAAATGAGATCGCCACTACCTGGTTTTCTATCCTCCGATGAAGCCTTTACATCAAGATACGGCTCATCTTCGATCTTCACAGAAAAGCCAAAACAAACCAGATCAAAATCAAGGAGGCACAAAGAGGCTGAATTTCAAGTCAACCCACCGAAAAGGCCAACTCTTACGTCATCATCTAGCCATGAGTCAGTGGACAACAGAGGAAAAGATATCGGCATCATCGAATTTTCGATGACTAGTTTGCTAGATAATCTTGTCAAAACCACCGAATTACCGGAGCATCAATCGGTTCCTCAAGAAGAGTCTCAGCCCTCACCGATCGTCAACATCAAGCACTTCTCAGACTCAAGCTCCAGCGAGTACGATATAGACTCTGGTGAAGAATCACTCCCAAAACAGTATGTAATTGGTGAAGGTTCAAGTACTCCTAAACAAGAGCCAAATGTCAACGAAGTATATTCAAGTGAAGAAGACATGAACTACGAAGCTCCAAGAGAAGAAACTCGCAATAAGCGTTTCTCTTCGAAGGTTATGGTGTTTACATTCGATGACATTCCTTTTGACAAATGGAATGACCGGTTGGACGAATTCCATGCATGGATGAACTCAGAAGCCATTACATCTCCCCTGCATTTGGTGATTCAACAGTTCACAGCGAGACTGTCTGGTGCACTGAAGGAATGGTGGAATTCCCTCGGGGAATACAGACAACAGCAGGTATATCAGATAACAATTCCGTTGCTTCTAGGAGAAATCCACAGAGAATTCATTGGCACTCCAACACATCAAAATGAGCAAATTCAAGAAGAATTCTTCTCAGCAAAATGTTGTTCTCTAAAAAAGAAAGATCTTGCGAAACATTTTGAAAGACAGACGAGAAGATATTATGCGCTAAACGGACTTAATAATCCAAGCCTGAAGCACGTCTATCTATCGTCTATTGATGATTATCTTAGTCAGCAGACTAAGTTATACATCAGAGATCAAGGACAAACAATTGAAGAAATCTCCATTGGCCAAATCCAGCAATATGTCTTCAGAACTCTCGACAAACTTTGCAAGCAGAAGGAGTTCTGGATGGAGTTCATGGATCGATCGAAGCAACTATCGAAAATATGTGCAAGACCAGATCTGTCGATCAAATGCTCAAAGTCCAAGAAATCATGCTCTTGTGATTCTAATGGAAAGCGCAAGAAATTCAAAAAGCGTTTCTCAAAACGCTCACCAACCTTCAGGCGCAAAAGATTCTTTCGAAAGAAAAGAAGCTTCAAGAAGTCAACAAAGTGCTTTCTGTGTCGAAAAGAAGGACATTATGCTAAGAATTGTCCTAACAAGTCAAAGAAGAAAAAACAATATCTAATCAGCTCGATATCAAAGATCGCACCAGATATTGACATCGACACCCACGACTTAGAGTCAGTTCTATCCTATGATAGTGACGACAGTGGAGCCATTTTGTGGATACTCCGACTCCGACTCTGATGATTCCACTGAATCATCTCACGAGGAAGACGAAGACTGCTGCTTCAAAATCACAGAGATACCGAAGGAAAAGGAAAAATACCCTCCGCATCTTCAGGTGAAGATCTCTGATCCAGCCCATAAAGAGAAACCGGTCGATGCCATCGCATTCATAGATACTGGGGCCCACACGACGATAATAAATCCGAAAATTCTCCCGTCTTCTATGTGGCTACCGCATCAACAAGAATTTCGTGTGGCAAATTCATGATCATTATCCATCAAACTCAAATCAAAGCCAATTACAATTGAGCTTTTTCCAGGATGTCGAATCACGACTAGAGTCCTTGGGTCAACAGCACCAGGCAAAGACGTGATTTTAGGGTGGGACTCATATTGCACTCTCAAGAAATCGTTCAACATCTCGATCGAACCAGAAGGCATACGGTGGAAGAATTTTTACAAATCCTTCACAACAGTACCGCGACTTTTTGCAGTTGAAGAATATGTATCTCAAGAATACGCGATAATCAAAGAAGAGATGACAAAGTATTCCTGTGCAGATTCTCTTACGGAATTCCTTCAAAAGTGCAAAAAACCGTTGTGGCTCAACTCCCAGTTCTTTGTCTCGTTACCTTTCAAAGAAAACGTTCTGACTACACCGACGAAAGCTAGTCACACGGGAATGCCACCAACCCTTCTAAAGCAAGCTAATGAAGAGTGTGATCAACTAGTAGAGCAAGGAGTAGTTTCAAACACGACTTCTCCATGGGCATGTAAGGCATTTTACGTCAACAACCGTGCAGAACAAGCAAGAGGAAAACTCCGGCTAGTAATCGACTACAAGCCACTAAACCAATTCCTCCAAGACTTCAAGTTTCCTCTACCAAACAAAAAGGCGCTTCTTCAGCACCTTCAAGGAGCAACTGTATTCTCGAAGTTTGACCTCAAGTCTGGATTTTGGCAACTTGGCGTTCAACCAGAAGAAAGATACAAGACCGCATTTTGTTTGCCAAATCGACACCTTCAATGGAATGTCCTACCTTTTGGCCTAAAGACAGCACCGTCACTGTTTCAGGAGGCAATGCTACGTATATTCAAGCCCCTTCTCGAATCAGCTTTGATATACATAGACGACATCCTGCTGTTCTCGTCAAATGAGAAAGAGCATGTTCAACTCCTTCAACAGTTCCAAAGTATCATCCTACAGTATGGAATCATGCTATCGGCCCGCAAAATGGTCATAGCCCAGCCCGACATCGAGTTCCTTGGAATGCAGATAAAAGATGGCAACTTTACACCTCAGGCCCATTTAGCTACGACACTTCTCGATTTTCCCGACGAAAACCTAACTAAGCGACAAGTCCAGCAATTTCTTGGTGTAATCAATTATGTAAGCGATTTCATCCCGCAACTTTCGCAACTGACAAGACCACTCAAGAAGATGCTGACAAAGAATCCACCTCAATGGGCAAACCGACAAACCGAGGCAATCAAAAGCCTAAAACTAGAGGTGCAGAGGCTACCACCTTTAAAGATTCCTTCCACAGGAACGCGCATACTGCAGACTGATGCGAGTGACAAATATTGGGGAGCTATTTTATTTGAAGAGATAAATGGGAAACGTCAAATCTGTGGATACAGAAGCGGACGCTTTAAAGATTCTGAAATGCATTATCACTCCACGTTCAAAGAGATATTGGCGGTCAAGAAAGCTATCGAGAAGTTCGAGTTTCATCTGATTGGACATAAATTTCGAATCGAAATGGATATGTCATCTTTTCCAAAGATGTTACAATTCAAGCAGAAGATGGTCCCACACCAACAATTATTGAGATGGAGCGAGTGGTTTTCGAAATACGATTTCGAATCCGTCTATTTAAAGGGCTCGAAGAACACTCTAGCAGACATGCTTAGTAGAAACCCACCGAAAGAAATACAAATGATGGAGAGCTCTAACTCAAAGAGTTTCTACGACTTCACAGCCAACATGCCTGAAGACGCCCAAGAACTCATCAACAAAAACACTCTACACGAGCGTCTCAGACAAATGATCTTTCGATACCAGTCAACTATTCTGTCAAGATATGGACCCAGCAATCACTTCATCAGCCCCATGGGGATTCACCCTGACTTCCCATTCGCACATCTCTACAGAATCGAGAACACCTTCATGCCAGAAGAAGTCCTCTGTTTCCTCTGGTATCTTTGCTCGAGCTACACCATCGGTATAGTTTTTGATATTCAATGGCTGTACCAATACATCAACGCTCAATTCGACGACCCTCTCCGTGGACACAACGAATGCCTCTCCACTTTTCTGACGTGGTTCTCGCCGTTATCTGCTTGGAACGGAAAATTAAGAAAATCAGCAAAAGCAACTGGACTACCATTCAAGAAGTTAAGAGGCCAAGGAGGTCTTAACCCCTTCTTCAATCCTCACACCATCTATTTCTTTCACCGTCATGTTCAAGTCAATAGCAAAACCAAAAAGGTCCATGCACTACCTACGCTCATCCACCACAACGACTATCGAAGAGGAGTCAGACCTGATTTCAACCTCAATGACACCAAAGCCTATGAAGACTTCCAGACTCATGCATTCCGACTCAACAATGCAACTCAGACATTCCCTATTCCTTTCAACCCGAACTGGTTCTACTACCCTATTGATTACCAGATGGATCTTGATGAAGATCTCCAAT

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

695

Start:

33381756  

End:

33382450

Strand:

+

>R4_LTR-Caulimovirus_36

CTTTCAAGATGCGCAACTTCCAGACGACGAGATGAATATCGACGAGATAGAAAAGAAGTTCAGCATTGAAATTGACGAAGAGGCAGCAAAAATAATTGAAGATTATGAAGAAGAGTACGTCTGCCCAGGTGAATATTACGGATGCTGCGACAAGCATATCATCGAGTTCGAGATCGATCATTAAAATAAGCATCCGTTATTAATGTATAATTATGTAAAATATGTGTGCTTTTAATTAAATAAAGCGATGATGTAATCGCTAGGTAAGCATGATGCAAGCGATGATGTAATCGCTATGTAAGCATGATGCAAGCAATGAGGTAAGCGCTTATGTCAGCGCCTTATCCTCATCTATAAATATGTGTGTACCCCCTTGTGAAATATCATCAAATAATTTCATAAAAAACCTCTCTCTCTAAGTTTCTCTCTCTAATGTCTCTCTAAAATTCTCTAGTTTTCCAGACCTTATCTCATCTTTGATAAGCTCTGATTTCTATCATCCATACAAAAGATGCGATCCAATTCTTAGCTGTAATTCTTCTTGATCGGTCTCCGTCAATACGACTCTGTCAACACGACTTTCGGGGGAGGTGATTATCCTAACAGTGGTTGAGCTTGATCGAAAGGGCCGAGGTAGTGCCTAAATCGCTCCCAATACCTGGAAAATCACCGAGCTCGTCTGATCAATATGACTC

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

320

Start:

38340601  

End:

38340920

Strand:

+

>R4_LTR-Caulimovirus_37

TGGTATTAGAGCCTTCATCTTGAGTTTTGGATGATAGAATCTTTGTTTATTAATGAATGTTTTGAGTGTTCTGGAAAACAACCCTCTTAAATAATGTCTACATCACAACCTTCTTCAATCGATTCTCAGTTTGCGATCTCAACCCTTCTTAAAAGCAAAAGCCGCTCTTCTTCTTCCTCTTCCACTATAAACTCCCTTTACGAAATCGAGTATATTCCGGGTGACCAGTTACCAGAAACAACCCTTCCTTTAGTAAATCCATATGAATACTTTGCAAAAAAGCCTAGCGCCTTCTCTGTTAAAGGCGTTCACGAACTCAT

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1739

Start:

38340925  

End:

38342663

Strand:

+

>R4_LTR-Caulimovirus_38

CCATCCTCTAACCGAAAGGTTATGGAGTATGTTCAATCCAGCAAGTTCTCATCTTGCCAAGTACCAGCCACTGAAGAAGAACAGTTCATCTCATTGAACATTCCGGAGCACCTACCCAGATTATGGCAACAACAAGGCTACACCCATCTCCACTTCGGTGTAGTGAGAATTGGTTTGACCTTACACGCCAGAAAAGGTCTACCAGTCATTGCTAGGATAGCTTTAATCGATTCCCGATTAAAGTCATATCAACAAGCGTGTATCGGAACAGTCCAGACAACATTAAATGCAGGAACAGTATTCGTAACGCTGTTTCCAAACTTTAATGTTTCGCTACAAGATCCAAATCTGTTGAAGACGCTCAAGGTACAGCTTCAACTAATTGGAGCACCTATGCAAGAGAAGAGTGTAGCAGCCACTTTGCATCATCAGATCGTCTACCGAATTCAAGATCACGCTCTCGATCTTGTACTACCTTCGTCTGACGAAGCCCTATATCTCGAAGTTACATCAGCATCTCAGGCACCAAATTCGATACAAATTCCTCGCCAGTTATCACGCGAAGAGCTGATAAGACGACTACCGGAGTCTTGGGTGACAAGCTACGAGAAGCTTCATCAAGCCACTCGATCGCCAATTCAATCTTCAGACGTTAGCTTTCATTCGCGAAAAGATGGAACAACGGAAATCAAGTTTGAAAAACCAAGATCTTCGTCATTCAGGAGGCAATTATTCACTCAATTTGCCATCGAGATTGATGAAAGAGATTTCTACGGCCCAGCTAAGAAACAAGACATCCCAAGGCCCTGTCGATTCGACAAAGACGGAAATATAGTCTATCCTTTCATAGATGAAGATGGACACTGCCGCTTTGACATCTGCAACTGCACAGCCTGTTCAGACGCCTACTGGAGCTACGAATCCGACGATGAAAACGAAGACGAAGAAGAAAGAAAAAAAGACCCTCTATACAAAAGTTATCTCGAAGGAGATCCTTCTGTTGGTCCGTTAGGCGATGATAGGTATGACTTTATAGTCGAATACCCCAGCGCAAAGAAAGAACCAGAGCAAGACTTCTTGATGATCAGCCCAAACAACTTTCCTCCACCAGAAGATTTCATCAAAGACGACGTTGCTCATACCCCAAAAATCCTTTCTGCAGCAATAGGTTCTTCTGGACCTACTCAGCTTAGCCAAGCAGAAAAGGTTCTAAACTGGCAAACAGAAAATTCTCTTACTCAGAATTATATGTTAACAGCAATAAACCAGAAGGTCGATCAGCTGACTGAAGGAGTTAACAAAAGGCATCTTAGCCTTCAAAACTCAATAACAGAAATACACGGTCGGCTCAACAGTCTCCATCAAGAGATGATGACGATGGCGAAGCACATGATGGTTGACACGACTCAATTTCGAAGCAAAGAAGCAGAGACGGCAAGCCTCAAAAATCAATTAAAAGATCTCCAACGGAGCTTAGAGAGTCTGATCTACAGTCAACAACAAAAGGACTCTTACTTTAACCCTTTGGAGAGTACATCGACGGATTTACCGATGTACCAAGGATCATACTCTCCGGGGTTCCTTTCGGGCTACCAAACCCCAAGGATAAGATTGCCACTACCTGGTTTCCTATCCTCCGATGAAGCCTTTACATTAAGATACGGCTCATCTTCGATCTTCACAGAAAAGCCAAAACAAACCAGATCAAAATCAAGGAGGCACAAAGAGGCCGAATTTCA

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

994

Start:

45187950  

End:

45188943

Strand:

+

>R4_LTR-Caulimovirus_39

TTCAAAATTTTACCTAAAATTAGAATTTTGGCAAATTCAGATATCTGAAAATGATAGTTATAAAACAGCATTTACTGTCCCTTTTGGCCAATACCAATGAAATGTAATGTAATGCTATTTGGTTTAAAAATGCACCTTTTGAATTTCAAAGAATTATGAATGATATATTTATGACTATTCAAAATTTTGCATTGTATATATTGATGATATATTAATATTTTCAAATTCTATTGATGACCATTTCTAGAATCTCAAGACATTTTACTATGTTGCAAGGACAAATGGTCTAGTTGTTTCCAAAACCGAAATGTCCCTATTTCAAACTAAGATAATATTTCTAGGTCACTACATATCACAAGGTATGATAACACCCATTGAAAGATCTTTAGAATTTGCAAATAAATTTCCAGGCAAAATTATTGATAAAACTCAATTAAAAATGTTCTTTGGAAGTCTCATTTTTTTCTAGATTTCTGTCCAAATATTAATAGGATAGCTAAACCTTTACATATTCTTCTAAATAAAAACCCAGTTCCATGGACAAAAGAACATACCAAAATAGTTCAAAGGATTAAAAAACAGGTCTTAGAAATCCCATGTCTGCATATAGCAGATCCGGATTTAGAGAAAATCGTAGAAACAGATTCTTCAGATGTAGGATATGGGGGTATTCTTAAGCAAAAGAATTTAGATGGCCACGAAAGTATTGTCCAGTTTACATCATCACATTGGAATGACACCCAAAAGAACTATTCTACTATCAAAAAAGAAAATTTAAATATAATTTTTGTATTCAAAAATTTCAAAGCGGTCTTTTAGATTAAAAAAAAATTCTTTTAAGAATTGAGTGCAAAACTGATAAAGATGTTTTACAAAACAATGTGAAAAACCTTGCATCAAAACAAATTTTTGCGAGGTGGCAAACGATTTTGAGTATTTTTTTATTTTGAAATTGAATTTATAAAAGGAGATTCAAACTCTGTCCCAGATTTCT

Raphanus sativus (v1.0)

ID:

R4_LTR-Caulimovirus_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

174

Start:

45204074  

End:

45204247

Strand:

-

>R4_LTR-Caulimovirus_40

GCAATCAAAAGAAATTGGTCGTTTACATAAACTAGATTCAACTGAGCTTAGCAGAGAATCTTCAAATACTTTAAACCGTGTGTCTCTTAAAATAACTAATATTGAAGTATATAATCTTAATTTTGAAAGAGGTTTTAAATCGACTTGGACTAAACCAATATGAATATATTTAAA