ID Class Order Superfamily Length Start End Strand View
R8_LTR-Caulimovirus_81 RetrotransposonsLTRLTR-Caulimovirus1602016833320168492+
R8_LTR-Caulimovirus_82 RetrotransposonsLTRLTR-Caulimovirus6982016858420169281-
R8_LTR-Caulimovirus_83 RetrotransposonsLTRLTR-Caulimovirus1602016930520169464+
R8_LTR-Caulimovirus_84 RetrotransposonsLTRLTR-Caulimovirus1132097555520975667+
R8_LTR-Caulimovirus_85 RetrotransposonsLTRLTR-Caulimovirus6772097580020976476+
R8_LTR-Caulimovirus_86 RetrotransposonsLTRLTR-Caulimovirus2362474376324743998+
R8_LTR-Caulimovirus_87 RetrotransposonsLTRLTR-Caulimovirus38872474585124749737+
R8_LTR-Caulimovirus_88 RetrotransposonsLTRLTR-Caulimovirus24922475054224753033-
R9_LTR-Caulimovirus_89 RetrotransposonsLTRLTR-Caulimovirus7421910466919105410-
R9_LTR-Caulimovirus_90 RetrotransposonsLTRLTR-Caulimovirus56181910554419111161-
R9_LTR-Caulimovirus_91 RetrotransposonsLTRLTR-Caulimovirus6441950661219507255-
R9_LTR-Caulimovirus_92 RetrotransposonsLTRLTR-Caulimovirus3931950727119507663-
R9_LTR-Caulimovirus_93 RetrotransposonsLTRLTR-Caulimovirus7101951085219511561-
R9_LTR-Caulimovirus_94 RetrotransposonsLTRLTR-Caulimovirus3971951156619511962-
R9_LTR-Caulimovirus_95 RetrotransposonsLTRLTR-Caulimovirus1352048765020487784+
R9_LTR-Caulimovirus_96 RetrotransposonsLTRLTR-Caulimovirus1372506872225068858-
RUS00067_LTR-Caulimovirus_97 RetrotransposonsLTRLTR-Caulimovirus287155619155905-
RUS00109_LTR-Caulimovirus_98 RetrotransposonsLTRLTR-Caulimovirus944734747440-
RUS00128_LTR-Caulimovirus_99 RetrotransposonsLTRLTR-Caulimovirus206121182121387+
RUS00128_LTR-Caulimovirus_100 RetrotransposonsLTRLTR-Caulimovirus816121385122200-

< 5 6 7 8 9 > Total 33


Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

160

Start:

20168333  

End:

20168492

Strand:

+

>R8_LTR-Caulimovirus_81

TAATAGACAAATTATAGCTACACCCTTTAAAACCGGAGCTAATAAAGATGATAAAGACCAAGTACATATGCAAGATATAAAATCAATATATCAACAAAATAATTATCAAAGTCAATTGTTATATACAATATCTAAACAAATAGACAGTATTGATGATAAA

Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

698

Start:

20168584  

End:

20169281

Strand:

-

>R8_LTR-Caulimovirus_82

GGTTCTGATCTACTGATTTCATTGTTACTTATTTTATCTTCAATACTGTCTATTTGTTTAGATATTGTATATAATAATTGATTTTGATAATTATTTTGTTGATATATTGATTTCATATCTTGCATATTTACTTGGTCTTTATCATCTTTATTAGCTCCGGTTTTAAAGGGTGTAGCTATAATTTGTTTATTAGCAGTATTTATTTTTATGTGTTTCAAGGGCGGATAGATGGATTTTATTTTATTTCCATCTAATTGTTCCCATACTTGACTTATTGACGTACTTGCATTAATTGTTTTAAATGGATATTCAATTTGATTTATAATTGAATAGTTTTCGAACCATTTAAAAATGGAATATTCATTTCTCTTTATATCATATAATTATACCAATTTTCTCTAAACATAGTTGTTTTTTGTTTAGAAAAAGTACTAAAATACCATTTTCTTTTTTCCTCGTTTTCTTTTGAGTAAAAATCTTCTTTAATATATTGTTTATTGATTTCATATTTTTTGGTTATAACATTTATTGATTTGAAATCTGATAAGGTTGGTGATGTTGGATACATATATTGATGCGGTTCAGCTATTGGTGCTTTGAATTGAATCGATTCGTCTTGTCTAATATTTTGATTTACACTTTCTGTTTCTGAATTTGTACTCGATTGACCCGTACGATATTCAGAAAAGAGGCTCTTG

Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

160

Start:

20169305  

End:

20169464

Strand:

+

>R8_LTR-Caulimovirus_83

TAATAGACAAATTATAGCTACACCCTTTAAAACCGGAGCTAATAAAGATGATAAAGACCAAGTACATATGCAAGATATAAAATCAATATATCAACAAAATAATTATCAAAGTCAATTGTTATATACAATATCTAAACAAATAGACAGTATTGATGATAAA

Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

113

Start:

20975555  

End:

20975667

Strand:

+

>R8_LTR-Caulimovirus_84

ATTGCGCTCCTAATTTTCAAGTAAGCTTGAATGACCCAACCATACTCAATACTTTAACTTTAAATGTGCATTTACCTGAAATAAAATTTCAAAATGAACGACATGGATATATA

Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

677

Start:

20975800  

End:

20976476

Strand:

+

>R8_LTR-Caulimovirus_85

ATTGCGCTCTTAATTTTCAAGTAAGCTTGAATGACCCAACCATACTCAATACTTTAACTTTAAATGTGCATTTACCTGAAATAAAATTTCAAAATGAACGACATGGATATCTACTACTCTATCGAGTTTATTTTAAGCAATCAACATCTGAATTTAACCCGAGATGCCTATTACAAGATGATAAAGGAGAAACAACAATTCTAGCAGTTCATAGTAAAGATACACCAACCGCTACATAAACACCAAAACAATTAAAATATGATGAAATAACTATCCCGGATCAATGGAAAATTGAAATTCCTCAACCTCCTAGAATTTTTGAACAAAAGAATATATTTAAAATAATTGAACAGAAAGATGGAAAAATATTATTAAGGTTTTGATCTTATAGGGATCCACTTCCACCTAGAATAAGTTCATATCATGCAAGAGCCTCTTTTTCTGAATATCGTACGGGTCAATCCAGTACAAATTCAGAAACAGAAAGTGTAAATCAAAATACTAAACAAGATGAACCAATAAGATTTAAAGCACCAATAGCAGAACCAAATCAAGATACGTATCCAACATCACCTACTCCATCAAATTTTAGATCAATAAATGTTATAACTAAAAAATACGAAATTGATAAACAGTATATAAAAGAAGACTTTTATTCAAAAGAAAATGATGAAAAA

Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

236

Start:

24743763  

End:

24743998

Strand:

+

>R8_LTR-Caulimovirus_86

ATTATGGTATCAGAGCCTTAATCTTGAGTTTTGGATGATAGAATCTTTGTTTATTGATGAATGTTTTGAGTGTTCTGAAAAACAACCCTCTTAATAATGTCTACTTCACAACCTTCTCCAATCGATTCCCAATTTACAATCTCAACCCTTCCTAAAAACAAAAGCCGTTCTTCTTCTTCCTCTTCCACTATAAACTTTCTTTATGAAATCGAGTACATTCCGGGTGACCAGTTACC

Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3887

Start:

24745851  

End:

24749737

Strand:

+

>R8_LTR-Caulimovirus_87

CCATCCTCTAACCGAAAGGTTATGGAGTATGTTCAATCCAGCAAGTTCTCATCTTGCCAAGTACCAACCACTGAAGAAGAACAGTTCATATCATTGAATATTCCGGAGCACCTACCCAGATTATGGCAACAACAAGGCTACACCCATCTCCACTTCGGTGTAGTAAGAATTGGTCTGACCTTACACGCCAGAAAAGGTCTACCAGTCATTGCTAGGATAGCTTTAATCGATTCCCGATTAAAGTCATATCAACAAGCATGTATCGGAACAGTCCAGACAACATTAAATGCAGGAACAGTATTCGTAACGCTGTTTCCTAACTTTAACGTTTCGCTACAAGATCCAAATCTGTTGAAGACGCTCAAGGTACAGCTTCAACTAATTGGAGCACCTATGCAAGAGAAGAGTGTAGCAGCCACTCTGCATCATCAGATCGTCTACCGAATTCAAGATCACGCTCTCGATCTTGTACTACCTTCGTCTGACAAAGCCCTGTATCTCGAAGTTACATCAGCTTCTCAGGCACCAAATTCGATACAAATTCCTCGCCAGATATCACGCGAAGAACTGATAAGACGGCTACCAGAGTCTTGGGTGACAAGCTACGAGAAGCTTCCTCAAGCCACTCAATCACCAGTTCAATCATCAGACGTTAGTTTTCATTCACGAAAAGATGGAACAACGGAAATCATGTTTGAAAAACCAAGATCTTCGTCATTCATGAAGCAATTATTTACTCAATTTGCCATCAAAGTTGACGAAAGAGATTTCTACGGCCCAGCTAAGAAACAAGACATCCCAAGGCCCTGTCGATTCGATAAAGACGGAAGTATAATCTATCCTTTCATAGACGAAGATGGACATTGCCGTTTTGACGTCTGCAACTGTGAAGCTTGTTCAGACGCTTACTGGAGCTACGAATCTGACGACGAAAAACGAAGACGAAGAAGAAAGAAAAAAGACCCTCTATACAAAAGGTATCTCGAAGGAGATCCTTCTGTTGGTCCGTTAGACGATGATATATATGACTTTATAGTCGAATACCCCAGCGCAAAGAAAGAACCAGAGCAAAACTTATTGATGATCAGCCCAAACGACTTTCCTCCACCAGAAGATTTCATCAAAGACGACGTTGCTCATACCCCAAAAATCCTTTCGGCAGCAATAGGTTCTTCTGGACCTACTCAGCTTAGCCAAGCAGAAAAGGTTTTAAACTGGCAAACAGAAAATTCTCTTGCTCAGAATTATCTGTTAACAGCAATAAACCAGAAGGTCGATCAGCTAACTGAAGGAGTTAACAAAAGGCATCTTAGCCTTCAAAACTCAATAGCAGAAATACACGGCCGGCTCAATAGTCTCCATCAGGAAATGATGACGATGGCGAAGCACATGATGGTTGACACGACTCAATTTCGAAGCAAAGAAGCAGAGACGGCAAGCCTCAAAAATCAATTAAAAGACCTCCAACGGAGCTTAGAGAGTCTGATCTACAGCCAACGACAGAAAGACTCTTACTTCAACCCTTTGGGGAGTTCATCGGCAGATTTACCGATGTACCAAGGATCATACTCTCCAGGATTCCTTTCGGGCTACCAAACCCCAAAAATGAGATCGCCACTACCTGGTTTTCTATCCTCTGATGAAGCCTTTACATCAAGATACGGCTCATCTTCGATCTTCACAGAAAAGCCAAAACAAACCAGATCAAAATCAAGGAGGCACAAAGAGGCTAAATTTCAAGTCAACCCACCAAAAAGGCCAACTCTTACGTCATCATCTAGCCATGAGTCGGTGGACAACAAAGGAAAAGATATCGGCATCATCGAATTTTCGATGACTAATTTGCTAGATAATCTTGTCAAAACCACCGAATTACCGGAGCATCAACCGGCTCCTCAAGAAGAGTCTCGGCCTTCACTGGTCGTCAACATCAAGCACTTCTCAGACTCAAGCTCCAGCGAGTACGATATAGATTCTGATGAAGAATCACTCCCAAAACAGTATGTAATTGGTGAAGGTTCAAGTACTCCTAAACAAGAGCCAAATGTCAACGAAGTATATTCAAGTGAAGAAGATATGAATTACGAAGCTCCAAGAGAAGAAACTCGCAATAAGCGTTTCTCTTCGAAGGTTATGGTGTTTACATTCGATGACATTCCTTTTGACAAATGGAATGACCGGTTGGACGAATTCCATGCATGGATGAACTCAGAAGCCATTACATCTCCTCTGAATTTGGTGATTCAGCAGTTCACAGCGAGACTGTCTGGTGCACTTAAGGAATGGTGGAATTCCCTCGGAGAATACAGACAACAACAAGTCTATCAGACAACAATTCCGCTGCTTCTAGGAGAAATCCACAGAGAATTCATTGGCACTCCGACACACCAAAAGGAGCAAATTCAAGAAGAATTCTTCTCAGCAAAATGTTGTTCTCTAAAAAAGAAAGATCTTGCGAAACATTTTGAAAGACAGACGAGAAGATATTATGCGCTAAACGGACTTAATAATCCAAGCCTGAAGCACGTCTATCTATCGTCTATTGATGATTATCTTAGTCAGCAGACTAAGTTATACATCAGAGATCAAGGACAAACAATTGAAGAAATCTCCATTGGCCAAATCCAGCAATATGTCTTCAGAACTCTCGAAAAACTTTGCAAGCAGAAGGAGTTCTGGATGGAGTTTATGGATCAATCCAAGCAACTATCGAAAATATGTGCAAGACCAGATCTATCGATCAAATGCTCGAAGTCCAAGAAATCATGCTCTTGTGAGTCTAATGGAAAGCGCAAGAAATTCAAAAAGCGTTTCTCAAAACGCTCACCAACCTTCAGGCGCAAAAGATTCTTTCGAAAGAAAAGAAGCTTCAAGAAGTCAACAAAGTGCTTTCTGTGTCGAAAAGAAGGACATTATGCTAAGAATTGTCCTAACAAGTCAAAGAAGAAAAAACAATATATAATCAGCTCGATATCAAAGATCGCACCAGATATTGACATCGACACCCACGACTTAGAGTCAGTTCTATCCTATGATAGTGACGACAGCGGAGCCATTTGTGGATACTCCGACTCCGACTCTGATGATTCCTCTGAATCATCTCACGAGGAAGACGAAGACTGCTGCTTCAAAATCACAGAGATACCAAAAGAAAAAGAAAAATACCCTCCGCATCTTCAGGTGAAGATCTCTGATCCAGCCCATAAAGAGAAACCGGTCGATGCCATCGCATTCATAGATACTGGGGCCCACACGACGATAATAAATCCAAAAATTCTCCCGTCTTCTATGTGGCTACCGCATCAACAAGAATTTCGTGTGGCAAATTCAGGATCATTATCCATCAAACTCAAATCAAAGCCAATCACAATTGAGCTTTTTCCAGGATGCCGAATCACGACTAGAGTCCTTGGGTCAACAGCACCAGGCAAAGACGTAATATTAGGGTGGGACTCATATTGCACTCTCAAGAAATCGTTCAACATCTCGATCGAACCAGAAGGCATACGGTGGAAGAATTTTTACAAATCCTTCACAACAGTACCGCGACTTTTTGCAGTTGAAGAATATGTCTCCCAAGAATACGCGAGAATCAAAGAAGAGATGACAAAGTATTCCTGTGCAGATTCTCATACGGAATTCCTTCAAAAGTGCAATAAACCGCTATGGCTCAACTCCCAGTTCTTTGTCTCGTTACCTTTCAAAGAAAATATTCTGACCACGCCGACGAAAGCTAGTCACGCAGGAATGCCACCAACCCTTTTAAAGCAAGCTAATGAAGAATGTGATCAACTAGTAGAGCAATGAGTAGTTTCAAACACGACTTCTCCATGGGCATGTAAGGCATTTTACGTCAACAACCGTGCAGAACAAGCAAGAGGAAAACT

Raphanus sativus (v1.0)

ID:

R8_LTR-Caulimovirus_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2492

Start:

24750542  

End:

24753033

Strand:

-

>R8_LTR-Caulimovirus_88

TTGATGTATTGGTACAGCCATTGAATATCAAAAACTATGCCGATGGTGTAGCTCGAGCAAAGATACCAGAGGAAACAGAGGACTTCTTCTGGCATGAAGGTGTTCTCGATTCTGTAAAGATGTGCGAATGGGAAGTCAGGGTGAATCCCCATTGGGCTGATGAAGTGATTGCTGGGTCCATATCTTGACAGAATAGTTGACTGGTATCGAAAGATCATTTGTCTGAGACGCTCGCGTAGAGTGTTTTTGTTGATGAGTTTTTGGGCGTCTTCAGGCATGTTGGCTGCGAAGTTGTAGAAACTCTTTGAGTTAGAGCTCTCCATCATTTGTATTTCTTTTGGTGGGTTTCTACTGAGCATGTCTGCTAGAGTGTTCTTCGAGCCCTTTAAATAGACGGATTCGAAGTCGTATTTCGAAAACCACTCGCTCCATCTCAATAATTGTTGATGTGGGACCATCTTCTGCTTGAATTGTAACATCTTTGGAAAAGATGACATATCCATTTCGATTCGAAATTTATGCCCAATCAGATGAAACTCGAACTTCTCGATAGCCTTCTTGACCGCCAATATCTCTTTGAACGTGGAGTGATAGTGCATTTCAGAATCTTTAAAGCGTCCGCTTCTGTATCCACAGATTTGACGTTTCCCATTTATCTCTTCAAATAAAATAGCTCCCCAATATTTGTCACTCGCATCAGTCTGCAGTATGCGTGTTCCTGTGGAAGGAATCTTTAAAGGTGGTAGCCTCTGCACCTCTAGTTTTAGGCTTTTGATTGCCTCGGTTTGTCGGTTTGCCCATTGAGGTGGATTCTTTGTCAGCATCTTCTGGAGTGGTCTTGTCAGTTGCGAAAGTTGCGGGATGAAGTCGCTTACATAATTGATTACACCAAGAAATTGCTGGACTTGTCGCTTAGTTAGGTTTTCGTCGGGAAAATCGAGAAGTGTCGTAGCTAAATGGGCCTGAGGTGTAAAGTTGCCATCTTTTATCTGCATTCCAAGGAATTCGATGTCGGGCTGGGCTATGACCATTTTGCGGGCCGATAGCTTGATTCCATACTGTAGGATGATACTTTGGAACTGCTGAAGGAGTTGAACATGCTCTTTCTCATTTGACGAGAACAGCAGGATGTCGTCTATATATATCAAAGCTGATTCGAGAAGAGGCTTGAATATACGTAGCATTGCCTCCTGAAACAGTGACGGTGCTGTCTTTAGGCCAAAAGGTAGGACATTCCATTGAAGGTGCCGATTTGGTAAACAAAATGCGGTCTTGTATCTTTCTTCTGGTTGAACGCCAAGTTGCCAAAATCCAGACTTGAGGTCAAACTTTGAGAATACAGTTGCTCCTTGAAGGTGCTGAAGAAGTGCCTTTTTGTTTGGTAGAGGAAACTTGAAGTCTTGGAGGAATTGGTTTAGTGGCTTGTAGTCAATTACTAGCCGGAGTTTTCCTCTTGCTTGTTCTGCACGGTTGTTGACGTAAAATGCCTTACATGCCCATGGAGAAGTCGTGTTTGAAACTACTCCTTGCTCTACTAGTTGATCACATTCTTCATTAGCTTGCTTTAAAAGGGTTGGTGGCATTCCTGCGTGACTAGCTTTCGTCGGCGTGGTCAGAACATTTTCTTTGAAAGGTAACGAGACAAAGAACTAGGAGTTGAGCCATAGCGGTTTATTGCACTTTTGAAGGAATTCCGTATGAGAATCTGCACAGGAATACTTTGTCATCTCTTCTTTGATTCTCGCGTATTCTTGGGAGACATATTCTTCAACTGCAAAAAGTCGCGGTACTGTTGTGAAGGATTTGTAAAAATTCTTCCACCGTATGCCTTCTGGTTCGATCGAGATGTTGAACGATTTCTTGAGAGTGCAATATGAGTCCCACCCTAATATTACGTCTTTGCCTGGTGCTGTTGACCCAAGGACTCTAGTCGTGATTCGGCATCCTGGAAAAAGCTCAATTGTGATTGGCTTTGATTTGAGTTTGATGGATAATGATCCTGAATTTGCCACACGAAATTCTTGTTGATGCGGTAGCCACATAGAAGACGGGAGAATTTTTGGATTTATTATCGTCGTGTAGGCCCCAGTATCTATGAATGCGATGGCATCGACCGGTTTCTCTTTATGGGCTGGATCAGAGATCTTCACCTGAAGATGCGGAGGGTATTTTTCTTTTTCTTTTGGTATCTCTGTGATTTTGAAGCAGCAGTCTTCGTCTTCCTCGTGAGATGATTCAGAGGAATCATCAGAGTCGGAGTCGGAGTATCCACAAATGGCTCCGCTGTCGTCACTATCATAGGATAGAACTGACTCTAAGTCGTGGGTGTCGATGTCAATATCTGGTGCGATCTTTGATATCGAGCTGATTAGATATTGTTTTTTCTTCTTTGACTTGTTAGGACAATTCTTAGCATAATGTCCTTCTTTTCGACACAGAAAGCACATTGTTGACTTCTTAAAGCTTCTTTTCTTTCGAAAGAATCTTTTGCG

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

742

Start:

19104669  

End:

19105410

Strand:

-

>R9_LTR-Caulimovirus_89

GCTCTGATACCAGGATAATAGCTGTCTTTAACCGATCACGTCGTGTTGACAAAGTCTTATTGATCAGACGAGTTCGATGATTTTCCAGGTATAGGGAGCGATTCAGGCACTACCTCGGCCTTTTCGATCAAGCTCAACCACTGTTAGGATAATCACCTCCCCGAAAGTCGTGTTGACAGAGTCGTATTGACGGAAACCGATCAAGGAGAATTACAGCTAAGACATGGATCGCATCTTGAGTATGGAAGATAGGAATCAGAGCTTATCAAAGATGAGATAAGGTCTAGAAAACTAGAGAACTTTAGAGAGACATTAGAGAGAGAAACTTAGAGAGAGGTTTTTATGAAATTATTTGATGATATTTCACAAGGGGGTACACACATATTTATAGATGAGAATAAGGCGTTGACATAAGCGCTTACCTCATTGCTTGCATCATGCTTACATAGCGATTACATCATCGCTTGCATCATGCTTACCTAGCGATTACATCATCGCTTTATTTGATGAAAAACACACATATTTTACATAATTATACATTAATAATGGATGCTTATTTTAATGATCAATCTCGAACTCGATGATATGCTTGTCGCAGCATCCGTAATATTCGCCTGGGCAGACGTACTCTTCTTCATAATCTTCAATTATTTTTGCTGCTTCTTCGTCAATTTCAATGTTGAACTTCTTTTCTATCTCGTCGATATTCATCTCGTCGTCTGGAAGTTGCGCATCTTGAAAG

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

5618

Start:

19105544  

End:

19111161

Strand:

-

>R9_LTR-Caulimovirus_90

ATTGGAGATCTTCATCAAGATCCATCTGGTAATCAATAGGGTAATAGAATCAATTCGGGTTGAAAGGAATAGGGAATGTCTGAATTGCATTGTTGAGTCGGAATGCATGAGTCTGGAAGTCTTCGTAGGCTTTGGTGTCATTGAGGTTGAAATCAGGTCTGACTCCTCTTTGATAGTCGTTGTGGTGGATGAGTGTAGGTAGTGCATGGACCTTTTTCGTTTTGTTGTTGACTTGAACAGGACGGTGAAAGAAATAGATGGTGTGAGGGTTGAAGAAGGGGTTAAGACCTCTTTGGCCTCTTAACTTCTTGAATGGTAATCCAGTTGCTTTTGCTGATTTTCTTAATTTACCATTCCAGGCAGATAACGGCGCGAACCATGTTAAGAAAGTGGAGAGGCATTCGTTGTGTCGACGGAGAGGGTCGTTGAATTGAGCATTGATGTATTGGTACAGCCATTGAATATCAAAAACTATACCGATGGTGTAGCTCGAACAAAGATACCAGAGGAAGCAAAGGACTTCTTCTGGCATGAAGGTGTTCTCGATCCTGTAGAGATGTGCAAATGGGAAGTCAGGGTGAATCCCCATTGGGCTGATGAAGTGATTGCTGGGTCCATATCTCGACAGAATAGTTGACTGGTATCGAAAGACCATTTGTCTGAGACGCTCGTGAAGAGTATTTTTGTTGATGAGTTCTTGGGCGTCTTCAGGCATGTTGGCTGCGAAGTTGTAGAAACTCTTTGAGTTAGAGCTCTCCATCATATGTATTTCTTTTGGTGGGTTTCTACTGAGCATGTCTGCTAGAGTGTTCTTCGAGCCCTTTAAATAGACGGATTCGAAGTCGTATTTCGAAAACCACTCGCTCCATCTCAATAATTGTTGGTGTGGGACCATCTTCTGTTTGAATTGTAACATCTTTGGAAAAGATGACATATCCATTTCGATTTGAAATTTATGTCCAATCAGATGAAACTCGAACTTCTCGATAGCTTTCTTGACCGCCAATATCTCTTTGAACGTGGAGTGATAATGCATTTCAGAATCTTTAAAGCGTCCGCTTCTGTATCCGCAGATTTGACGTTTCCCGTTTATCTCTTCAAATAAAATGGCCCCCCAATATTTGTCACTCGCATCAGTCTGCAGTATGCGCGTTCCTGTGGAAGGAATCTTTAAAGGTGGTAGCCTCTGCACCTCTAGTTTTAGGCTTTTGACCGCCTCGGTTTGTCGGTTTGCCCATTGAGGTGGATTCTTTGTCAGCATCTTCTGGAGTGGTCTTGTCAGTTGCGAAAGTTGCGGGATGAAGTCGCCTACATAATTGATTACACCAAGAAATTGCTGGATTTGTCGCTTAGTTAGATTTTCGTCGGGAAAATCGAGAAGCGTCGTAGCTAAATGGGCCTGAGGTGTAAAATTGCCATCTTTTATCAGCATTCCAAGGAATTCGATGTCGGGCTGGGCTATGACCATTTTGCGGGCTGATAGCATAATTCCATACTGTAGGACGATACTTTGGAACTGTTGAAGGAGTTGAACATGCTCCTTCTCATTTGACGAGAATAGCAGGATGTCGTCTATGTATATTAAAGCCGATTCGAGAAGAGGCTTGAATATACGTAACATTGCCTCCTGAAAAAGTGACGGTGCTGTCTTTAGACCAAAAGGTAGGACATTCCACTGGAGGTGCCGGTTTGGCAAACAAAATGCGGTCTTGTATCTTTCTTCCGGTTGAACGCCAAGTTGCCAAAATCCAGACTTAAGGTCAAACTTTGAGAATACATCGCTCCTTGAAAGTGCTGAAGAAGTGCTTTTTTGTTTGGTAGGGGAAATTTGAAGTCTTGGAGAAATTGGTTTAATGGCTTGTAGTCAATTACTAGCCGGAGTTTTCCTCTTGCTTGCTCCGCACGGTTATTGACGTAGAATGCCTTACATGCCCATGGAGAAGTTGTGTTTGAAACTACTCCTTGCTCTACTAGTTGATCGCATTCTTCGTTAGCCTGCTTCAAAAGGGTTGGTGGCATCCCCGCGTGACTTGCTTTTGTCGGTGTGGTTAGGACGTTTTCTTTGAAAGGTAACGAAACAAAGAACTGGGAGTTGAGCCATAGTGGTTTGCTGCACTTATGAAGGAATTCCGTATGAGACTCTGCACATGAATACTTCGTCATTTCTTCTTTGATTTTTGCATATGCCTGAGAAATGTGTTCTTCAACTGCGAAAAGTCGCGGTACAGTAGTGAAAGATTTGTAGAAATTCTTCCACCGTATGTCCTCTGGTTCGATCGAGATGTTGAATGACTTTTTGAGAGTGCAATATGAATCCTACCCTAATATTACGTCTTTGCCTGGTGCTGTTGACCCAAGGACTGTAGTCGTGATTCGGCATCCTGGAAAAAGCTCAATTGTAATTGGCTTTGATTTGAGTTTGATGGATAATGATCCTGAATTTGCCACACGAAATTCTTGTTGATGCGGTAGCCACATAGAAGACGGGAGAATTTTCGGATTTATTATCGTTGTGTGGGCCCCAGTATCTATGAATGCGATGGCATCGACTGGTTTCTCTTTATGGGTCGGATCAGAGATCTTCACCTGAAGATGCGGAGGGTATTTTTCCTCTTACTTCGGTATCTCTGTGATTTTGAAGCAGTAATCTTCGTCTTCCTCGTGAGATGATTCAGAGGAATCGTCAGAGTCGGAGTCGGAGTCGGAGTATCCACAAATGGCTCCGCTGTCGTCACTATCATAGGATAGAACTGATTCCAAGTCGTGGGTGTCGATGTCAATATCTGGTGCGATCTTTGATATCGAGCTGATTAGATATTGTTTTTTCTTCTTTGACTTGTTAGGGCAATTCTTAGCATAATGTCCTTCTTTTCGACACAGAAAGCACTTTGTTGACTTCTTGAAGCTTCTTTTCTTTCGAAAGAATCTTTTGCGCCTGAAGGTTGGTGAGCGTTTTGAGAATCGCTTTTTGAATTTCTTGCGCTTTCCATTAGAATCACAAGAGCATGATTTCTTGGACTTCGAGCATTTGATCGATAGATCCGGTCTTGCACATATTTTTGATAGCTGCTTCGATCGATCCATAAACTCCATCCAGAACTCCTTCTGCTTGCAAAGTTTGTCGAGAGTTCTGAAGACATACTGCTGGATTTGACCAATGGAGATTTCTTCAATCGTTTGCCCCTGATCTCTGATGTACAACTTGGTCTGCTGACTAAGATAATCATCAATGGACGATAGATAGACATGCTTCAGGCTTGGATTATTGAGTCCATTTAGCGCATAATATCTTCTCGTCTGTCTTTCAAAATGCTTCGCAAGATCTTTCTTTTTTAGAGAACAACATTTTGCTGAGAAGAATTCTTCTTGAATTTGTTCCTTTTGATGTGTTGGAGTACCAATGAATTCTCTGTGGATTTCTCCTAGTAGCAACGGAATTGTTGTCTGATAGACTTGCTGTTGTCTGTATTCCCCGAGGGAATTCCACCATTCCTTAAGTGCGCCAGACAGTCTCGCTGTAAATTGTTGAATCACCAAATGCAGGGGAGACGTAATAGCTTCAGAGTTCATCCATGCATGGAATTCGTCCAACCGGTCATTCCATTTGTCGAAAGGAATGTCGTCGAACGTAAATACCATAACCTTCGAAGAGAAACGCTTATTGCGAGTTTCTTCTCTTGGAGCTTCATAATTCATGTCTTCCTCACTTGAATATACCTCGTTGACATTTGGCTCTTGTTTAGGAGTACTTGATCCTTCACCGATTACATACTGTTTTGGGAGCGATTCTTCATCAGAATCTAAATCGTATTCACTGGAGCTTGAGTCTGAGAAGTGCTTGATGTTGACGATGGGGGAGGGCTGAGTTTCTTCTTGAGGAACTGGTTGATGCTCCAGTAGATTGGTGGTTTGGACAATATTATCTAGCAAACTAGTCATCGAAAATTCGATGATGCCGATATCTTTTCCTTTGTTGTCCACCGACTCATGGCTAGATGATGACGTAAGAGTTGGCCTTTTCGGTGGGTTGACTTGAAATTCAGCTTCTTTGTGCCTTCTTGATTTTGATCTGGTTTGTTTTGGCTTTTCTGCGAAGATCGAAGATGAGCCGTATCTTGATGTAAAGGTTTCATCGGAGGATAGAAAACCAGGTAGTGGCGATCTCATTTTTGGGGTTTGGTAGCTCGAAAGGAATCCTGGAGAGTACGATCCTTGGTATATCGGTAAATCTGTCGATGAACTCCCCAAAGGGTTGAAGTAAGAGTCTTTATGTCGTTGATTGTAGATCAGACTCTCTAAGCTCCGTTGGAGGTCTTTTAATTGATTTTTGAGGCTTGCCGTCTCTGCTTCTTTGCTTCGAAACTGAGTCGTGTCAACCATCATGTGCTTCGCCATCGTCATCATCTCCTGATAGAGACTGTTAAGCCGACCGTGTATTTCTGTTATTGAGTTTTGAAGGCTAAGATGCCTTTTGTTAACTCCTTCAGTCAGCTGATCGACCTTTTGGTTTATTGCTGTTAACAGATAATTCTGAGCAAGAGAATTTTTTGTTTGCCAGTTTAGAACCTTTTATGCTTGGCTAAGCTGAGTAGGTCCAGAAGAACCTATTGCTGCAGAAAGGATTTTTGGGGTATGAGCAACGTCGTCTTTGATGAAATCTTCTGGTGGAGGAAAGTTGTTTGGGCTGATCATCAATAAGTCTTGCTCTGGTTCTTTCTTTGCACTGGGGTATTCAACTATAAAGTCATACCTATCATCGCCTAGCGGACCAACAGAAGGATCTCCTTCGAGATACCTTTTGTATAGAGGGTCCTTTTTCTTTCTTCTTCGTCTTCGTTTTTCATCGTCGGATTCGTAGCTCCAGTAGGCATCTGAACAGGCTGTGCAGTTGCAGATGTCAAAGCGGCAGTGTCCATCTTCATCTATGAAAGGATAGACTATATTTCCGTCTTTGTCGAATCGACATGACCTTGGGATGTCTTGTTTCTTAGCTGGGCCATAGAAATCTCTTTCGTCAACCTCGATGGCAAATTGAGTAAATAATTGTTTCCTGAACGACGAAGATCTTGGTTTTTCAAACTTGATTTCCGTTGTTCCATCTTTCCGTGAATGAAAGCTAACGTCTGAAGATTGAACTGGCGATTGAGTGGCTTGATGAAGCTTCTCGTAGCTTGTCACCCAAGACTCCGGTAGTCGTCTTATCAGCTCTTCGCGTGATATCTGGCGAGGAATTTGTATCGAATTTGGTGCCTGAGATGCTGATGTAACTTCGAGATACAGGGCTTCGTCAGACGAAGGAAGTACAAGATCGAGAGTGTGATCTTGAATTCGGTAGATGATCTGATGATGCAAAGTGGCTGCCACACTCTTCTCTTGCATAGGTGCTCCAATTAGTTGAAGCTGTACCTTGAGCGTCTTCATCAGATTTGGATCTTGTAGCGAAACATTAAAGTTTGGAAACAGCGTTACGAATACTGTTTCTGCATTTAATGTTGTCTGGACTGTTCCGATACATGCTTGTTGATATGACTTTAATCGGGAATCGATTAAAGCTATCCTAGCAACGACTGGTAGACCTTTTCTGGCGTGTAAAGTCAAACCAATTCTTACTACACCGA

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

644

Start:

19506612  

End:

19507255

Strand:

-

>R9_LTR-Caulimovirus_91

TGAAGGCTCTTCTGACAATTGAATAGGCAATTGGGTAGCTTGATGAAGCTTTTCATAACTCATCACCCATGACTCCCGTAGTCGGTGCAGTAACTCTTCGCGAGAAATATGTCGGGGAATCTGTATTGAGTTGGGTGCTTAGGATGCTTGAGATATAGGGCAGCATCGGATGAGGGTAACACAAGATCAAGAGCGTGATCTTGAATTCAGTAGACGGTTTGGTGATGTAGGGTAGCTACTATACTCTTTTCTTGCATAGGTGCTCCGATTAGTTGAAGTTGAACCTTGAGCGTCCTTAAGAGATTTGGGTCTTATAATGAAACATTAAAGTATGAAAACGTTATTAGTATAATGTTCCTGCATTTAATGTCGTTTGAACCGTTCCGATGCAAGCTTGTTGGTATGACTTTAATCGAGAGTCGATTAAGGCTGTTCGGGCTATGACTGATAGACCTTTTCTCGCATGTAAGGTCAAACTAATTCTTACTACACCAAAGTGAATGTGAGTATAACCTTGCTGCTGCCACAATCTAGATAGGTTCTCCAGGATGTTTAGAGAGATAAATTATTCTTCTTCCATGGCTGAAAATTACCAGGATGAGAACTTGTCTGACTGGACATACTCCATTCCGGTTGGAGGACGG

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

393

Start:

19507271  

End:

19507663

Strand:

-

>R9_LTR-Caulimovirus_92

ACCGAGAAGGCGCTAGGCTTTTTTGCAAAGTATTCGTATGGATTCACCAGATGAAATGTAGTTTTCGGTAGTTTATCGCTCGGAACATACTCGATCTTGTATAGGGAATTAATGTTAGAGGAGGAATAGCGGCTTTTACTTTCAGTAAGAGTGGAAATTTTAAATTTAAAATCGATAGAGGAAGGATGCGAAGTAGACATTTTTGAGAGAGTTGTTTTCCAGAATTCTTAAAACAATCGGTCATAAACAATGATTATATCGACCATACCGCAAGCATGTAGGCTATGATACCATTTTGCACAGAATAAGCGGTCGTCCTATTGACAAAATCGTGTTGACAGATGAGGGTCGGTAATTTCGAGGTACATGGAGCGATATTGGTACTATTCTCTG

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

710

Start:

19510852  

End:

19511561

Strand:

-

>R9_LTR-Caulimovirus_93

GGTTTTTAGAATTTGATCTCGGTTGTTTCATCGTTTCGAGAATGAAAACTGACTTCTGACGATTGAATAGGCAACTGGGTAGCTTGGTGAAGCTTGATGAAGCTTTTTATAAATCATCACCCATGACTGGTAGTCGGCGCATTAACTCTTAGCGGGAACTCTATCGGAGAATATGTATTTAGTTAGGTGCTTGGGATGTTGATGATACTTCGAGATATAGGGCTTCATAGGATGAGAATAACACAAGATCAAAAGCGTGATTTTGAATTTGGTAGACGATCTGGTGATGTAGGATAGCTACTACACTCTTTTCTTGCATATGTGCTCCGATTAGTTGAAGTTGAACCTTGAGAATCCTTAAGAGATTTAAGTCTTATAACAAAACGTTAAAGTTTGGAAATAGTGTTATAAATAATGTTCATGCATTTAATGTCGTTTGAACCATTCCGATGCAAGTTTGTTGGTGTGACTTTAATTGAGTTGATTAAGGTTATTCGGGCTATAACTGGTAGATATTTTCTTGCATTGAAGGCAAAATCAATTCTTACTACACCAAAGTGAAGGTGAGTATAACCCTGCTGCTGTAACAATCTAGGTAGGTTCTCCAGAATGTTTAGAGAGATAAATTGTTCTTCTTCCGTGGCTGGAATTTAGCAGGATGAGAACTTTCTGGACTGGACATACTCCATTACTTTCTGGTTGGAGGACGG

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

397

Start:

19511566  

End:

19511962

Strand:

-

>R9_LTR-Caulimovirus_94

ATGAGTTTACAAATGCCCTTGACCAAGAAGGCGCTAGGCTTTTTTCAAAGTATTCATATGGATTCACCAGAGGAAGGGTAGTTTTTACGTAGTTGACCACTCAGAACATACTCAATCTCGTATAGGGAATTAATATTATAGGAGGAAAAACGGCTTTTACTTTTAGGAAGAGTGGACATTTCAAATTGAGAATCGATAGAGGAAGGATGCGAAATAGACATTTTTAAGAGAGTCATTTTCCGGAATTCTTAAAACAATCAGTCATAAACAATGATTCTATCGACCATAACGCAAGCATGTAGGCTCTGATACCATTTTGCACAAAATAAGCGGTCGTCGTATTGATAAAATCATGTTGACAGACGATGATCGGTAATTTCCAGGTATAGGGAGAGAT

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

135

Start:

20487650  

End:

20487784

Strand:

+

>R9_LTR-Caulimovirus_95

ATCATGTCGTTTGTGGACTGAAGAAGAACAGTTCATATCATTGAACATTCCGGAGCACCTATCCAGATTATGGCAACAACAAGGCTACACCCATCTCCACTTCGGTGTAGTAAGAATTGGTTTAACCTTACACGC

Raphanus sativus (v1.0)

ID:

R9_LTR-Caulimovirus_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

137

Start:

25068722  

End:

25068858

Strand:

-

>R9_LTR-Caulimovirus_96

TTCATTTGAACCGGATTAGTTTTTGTGAGAATTTTGTCTTCAAGATTTTTTTTATAATAAGGTAAATCAGCAATATGTTATTTTCGATTCCAAAAATCAGTAGGTAGATCTGAATAATTTTTTTTCATAAATAATTT

Raphanus sativus (v1.0)

ID:

RUS00067_LTR-Caulimovirus_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

287

Start:

155619  

End:

155905

Strand:

-

>RUS00067_LTR-Caulimovirus_97

GTCGTGTTGACAAAGTCTTATTGATCAGACGAGCTCGGTGATTTTCCAGGTATAGGGAGCGATTTAGGCACTACCTCGGCCTTTTCGATCAAGCTCAACCACTATTAGGATAATCACTTCCCCCGAAAGTCGTGTTGACAAAGTCGTATTGACGGAGATCGATCAAGAAGAATCACAGCTAAGAGTTGGATTGCATCTTGTGTATGGAAGATAGAAATCAGAGCTTATTAAAAAAGAGATAAGGTCTGGAAAACTAGAAAACTTTAGAGAGACATTAGAGAGAGAAA

Raphanus sativus (v1.0)

ID:

RUS00109_LTR-Caulimovirus_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

94

Start:

47347  

End:

47440

Strand:

-

>RUS00109_LTR-Caulimovirus_98

GGTATTGTTGTCTGATAGATTTATTGTTGTTTGTATTCACCGAGTGAGTTTACCATTCTCTAAAGAAGTGCACCTGTAGTTTTGCGGTGAATTG

Raphanus sativus (v1.0)

ID:

RUS00128_LTR-Caulimovirus_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

206

Start:

121182  

End:

121387

Strand:

+

>RUS00128_LTR-Caulimovirus_99

ATGAATTATGAAGCTCCAAGAGAAGAAACTCGCAATAAGCGCTTCTCTTCGAAGGTTATGGTGTTTACGTTCGACGACATTCTTTTCGACAAATGGAATGACCGGTTGGACGAATTCCATGCATGGATGAACTCAGAAGCCATTACGTCTCCCCTGCATTTGGTGATTCAACAATTCACAACGAGGCTGTCTGGCGCACTTAAAGA

Raphanus sativus (v1.0)

ID:

RUS00128_LTR-Caulimovirus_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

816

Start:

121385  

End:

122200

Strand:

-

>RUS00128_LTR-Caulimovirus_100

AGATGTGGAGGGTATTTTTCTTCTTGTTTCGGTATCTTTGTGATTTTGAAACAGCAATCTTCGTCTTCATCGGGGGATGATTCAGAAGAATCATCAGAGTCAGAGTATCCACAAATGGCTCCGCTGTCGTCATTGTCATAAGATAGAACTGATTCTAGGTCGTGGGCGTCGATGTCAATATCTGGTGCGATTTTTGATATCGAGCTGATTAGATACTGCTTCTTCTTTTTTGACTTGTTAGGGCAATTCTTAGTATAATGTCCTTCTTTTCGACACAGAAAGCACCTTGTTGACTTCTTGAAACTTCTTTTCTTTCGAAAGAATCTTTTGCGCCTAAAGGTTGGTGAGCGTTTTGAGAAACGCTTTTTGAATTTCTTGCGCTTTCCATTCGAATCACAAGAGCATGTTTTCTTGGACTTCGAGCATTTGATCGAAAGATCTGGTCTTGCACATATTTTTGATAGTTGTTTCGAACGATCCATAAACTCCATACAGAACTCCTTCTGCTTGCAAAGTTTGTCGAGAGTTCTAAAGACATACTGCTGGATTTGACCAATGGAGATTTCTTCAATTGTTTGTCCTTGATCTCTGATGTACAACTTAGTATGCTGACTAAGATAATCATCAATAGACGATAGATAGACATGCTTCAGGCTTGGATTATTGAGTCCGTTTAGTGCATAATATCTTCTCGTTTGTCTTTCAAAATGCTTCGCAAGATCTTTCTTTTTTAGAGAACAACATTTTGCTGAGAAGAATTCTTCTTGAATTTGCTCATTTTGATGTGTTGGAGTGCCAATGAATTCTCTGTGGATT