Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_81Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
160Start:
20168333End:
20168492Strand:
+>R8_LTR-Caulimovirus_81
TAATAGACAAATTATAGCTACACCCTTTAAAACCGGAGCTAATAAAGATGATAAAGACCAAGTACATATGCAAGATATAAAATCAATATATCAACAAAATAATTATCAAAGTCAATTGTTATATACAATATCTAAACAAATAGACAGTATTGATGATAAA
Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_82Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
698Start:
20168584End:
20169281Strand:
->R8_LTR-Caulimovirus_82
GGTTCTGATCTACTGATTTCATTGTTACTTATTTTATCTTCAATACTGTCTATTTGTTTAGATATTGTATATAATAATTGATTTTGATAATTATTTTGTTGATATATTGATTTCATATCTTGCATATTTACTTGGTCTTTATCATCTTTATTAGCTCCGGTTTTAAAGGGTGTAGCTATAATTTGTTTATTAGCAGTATTTATTTTTATGTGTTTCAAGGGCGGATAGATGGATTTTATTTTATTTCCATCTAATTGTTCCCATACTTGACTTATTGACGTACTTGCATTAATTGTTTTAAATGGATATTCAATTTGATTTATAATTGAATAGTTTTCGAACCATTTAAAAATGGAATATTCATTTCTCTTTATATCATATAATTATACCAATTTTCTCTAAACATAGTTGTTTTTTGTTTAGAAAAAGTACTAAAATACCATTTTCTTTTTTCCTCGTTTTCTTTTGAGTAAAAATCTTCTTTAATATATTGTTTATTGATTTCATATTTTTTGGTTATAACATTTATTGATTTGAAATCTGATAAGGTTGGTGATGTTGGATACATATATTGATGCGGTTCAGCTATTGGTGCTTTGAATTGAATCGATTCGTCTTGTCTAATATTTTGATTTACACTTTCTGTTTCTGAATTTGTACTCGATTGACCCGTACGATATTCAGAAAAGAGGCTCTTG
Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_83Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
160Start:
20169305End:
20169464Strand:
+>R8_LTR-Caulimovirus_83
TAATAGACAAATTATAGCTACACCCTTTAAAACCGGAGCTAATAAAGATGATAAAGACCAAGTACATATGCAAGATATAAAATCAATATATCAACAAAATAATTATCAAAGTCAATTGTTATATACAATATCTAAACAAATAGACAGTATTGATGATAAA
Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_84Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
113Start:
20975555End:
20975667Strand:
+>R8_LTR-Caulimovirus_84
ATTGCGCTCCTAATTTTCAAGTAAGCTTGAATGACCCAACCATACTCAATACTTTAACTTTAAATGTGCATTTACCTGAAATAAAATTTCAAAATGAACGACATGGATATATA
Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_85Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
677Start:
20975800End:
20976476Strand:
+>R8_LTR-Caulimovirus_85
ATTGCGCTCTTAATTTTCAAGTAAGCTTGAATGACCCAACCATACTCAATACTTTAACTTTAAATGTGCATTTACCTGAAATAAAATTTCAAAATGAACGACATGGATATCTACTACTCTATCGAGTTTATTTTAAGCAATCAACATCTGAATTTAACCCGAGATGCCTATTACAAGATGATAAAGGAGAAACAACAATTCTAGCAGTTCATAGTAAAGATACACCAACCGCTACATAAACACCAAAACAATTAAAATATGATGAAATAACTATCCCGGATCAATGGAAAATTGAAATTCCTCAACCTCCTAGAATTTTTGAACAAAAGAATATATTTAAAATAATTGAACAGAAAGATGGAAAAATATTATTAAGGTTTTGATCTTATAGGGATCCACTTCCACCTAGAATAAGTTCATATCATGCAAGAGCCTCTTTTTCTGAATATCGTACGGGTCAATCCAGTACAAATTCAGAAACAGAAAGTGTAAATCAAAATACTAAACAAGATGAACCAATAAGATTTAAAGCACCAATAGCAGAACCAAATCAAGATACGTATCCAACATCACCTACTCCATCAAATTTTAGATCAATAAATGTTATAACTAAAAAATACGAAATTGATAAACAGTATATAAAAGAAGACTTTTATTCAAAAGAAAATGATGAAAAA
Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_86Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
236Start:
24743763End:
24743998Strand:
+>R8_LTR-Caulimovirus_86
ATTATGGTATCAGAGCCTTAATCTTGAGTTTTGGATGATAGAATCTTTGTTTATTGATGAATGTTTTGAGTGTTCTGAAAAACAACCCTCTTAATAATGTCTACTTCACAACCTTCTCCAATCGATTCCCAATTTACAATCTCAACCCTTCCTAAAAACAAAAGCCGTTCTTCTTCTTCCTCTTCCACTATAAACTTTCTTTATGAAATCGAGTACATTCCGGGTGACCAGTTACC
Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_87Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
3887Start:
24745851End:
24749737Strand:
+>R8_LTR-Caulimovirus_87
CCATCCTCTAACCGAAAGGTTATGGAGTATGTTCAATCCAGCAAGTTCTCATCTTGCCAAGTACCAACCACTGAAGAAGAACAGTTCATATCATTGAATATTCCGGAGCACCTACCCAGATTATGGCAACAACAAGGCTACACCCATCTCCACTTCGGTGTAGTAAGAATTGGTCTGACCTTACACGCCAGAAAAGGTCTACCAGTCATTGCTAGGATAGCTTTAATCGATTCCCGATTAAAGTCATATCAACAAGCATGTATCGGAACAGTCCAGACAACATTAAATGCAGGAACAGTATTCGTAACGCTGTTTCCTAACTTTAACGTTTCGCTACAAGATCCAAATCTGTTGAAGACGCTCAAGGTACAGCTTCAACTAATTGGAGCACCTATGCAAGAGAAGAGTGTAGCAGCCACTCTGCATCATCAGATCGTCTACCGAATTCAAGATCACGCTCTCGATCTTGTACTACCTTCGTCTGACAAAGCCCTGTATCTCGAAGTTACATCAGCTTCTCAGGCACCAAATTCGATACAAATTCCTCGCCAGATATCACGCGAAGAACTGATAAGACGGCTACCAGAGTCTTGGGTGACAAGCTACGAGAAGCTTCCTCAAGCCACTCAATCACCAGTTCAATCATCAGACGTTAGTTTTCATTCACGAAAAGATGGAACAACGGAAATCATGTTTGAAAAACCAAGATCTTCGTCATTCATGAAGCAATTATTTACTCAATTTGCCATCAAAGTTGACGAAAGAGATTTCTACGGCCCAGCTAAGAAACAAGACATCCCAAGGCCCTGTCGATTCGATAAAGACGGAAGTATAATCTATCCTTTCATAGACGAAGATGGACATTGCCGTTTTGACGTCTGCAACTGTGAAGCTTGTTCAGACGCTTACTGGAGCTACGAATCTGACGACGAAAAACGAAGACGAAGAAGAAAGAAAAAAGACCCTCTATACAAAAGGTATCTCGAAGGAGATCCTTCTGTTGGTCCGTTAGACGATGATATATATGACTTTATAGTCGAATACCCCAGCGCAAAGAAAGAACCAGAGCAAAACTTATTGATGATCAGCCCAAACGACTTTCCTCCACCAGAAGATTTCATCAAAGACGACGTTGCTCATACCCCAAAAATCCTTTCGGCAGCAATAGGTTCTTCTGGACCTACTCAGCTTAGCCAAGCAGAAAAGGTTTTAAACTGGCAAACAGAAAATTCTCTTGCTCAGAATTATCTGTTAACAGCAATAAACCAGAAGGTCGATCAGCTAACTGAAGGAGTTAACAAAAGGCATCTTAGCCTTCAAAACTCAATAGCAGAAATACACGGCCGGCTCAATAGTCTCCATCAGGAAATGATGACGATGGCGAAGCACATGATGGTTGACACGACTCAATTTCGAAGCAAAGAAGCAGAGACGGCAAGCCTCAAAAATCAATTAAAAGACCTCCAACGGAGCTTAGAGAGTCTGATCTACAGCCAACGACAGAAAGACTCTTACTTCAACCCTTTGGGGAGTTCATCGGCAGATTTACCGATGTACCAAGGATCATACTCTCCAGGATTCCTTTCGGGCTACCAAACCCCAAAAATGAGATCGCCACTACCTGGTTTTCTATCCTCTGATGAAGCCTTTACATCAAGATACGGCTCATCTTCGATCTTCACAGAAAAGCCAAAACAAACCAGATCAAAATCAAGGAGGCACAAAGAGGCTAAATTTCAAGTCAACCCACCAAAAAGGCCAACTCTTACGTCATCATCTAGCCATGAGTCGGTGGACAACAAAGGAAAAGATATCGGCATCATCGAATTTTCGATGACTAATTTGCTAGATAATCTTGTCAAAACCACCGAATTACCGGAGCATCAACCGGCTCCTCAAGAAGAGTCTCGGCCTTCACTGGTCGTCAACATCAAGCACTTCTCAGACTCAAGCTCCAGCGAGTACGATATAGATTCTGATGAAGAATCACTCCCAAAACAGTATGTAATTGGTGAAGGTTCAAGTACTCCTAAACAAGAGCCAAATGTCAACGAAGTATATTCAAGTGAAGAAGATATGAATTACGAAGCTCCAAGAGAAGAAACTCGCAATAAGCGTTTCTCTTCGAAGGTTATGGTGTTTACATTCGATGACATTCCTTTTGACAAATGGAATGACCGGTTGGACGAATTCCATGCATGGATGAACTCAGAAGCCATTACATCTCCTCTGAATTTGGTGATTCAGCAGTTCACAGCGAGACTGTCTGGTGCACTTAAGGAATGGTGGAATTCCCTCGGAGAATACAGACAACAACAAGTCTATCAGACAACAATTCCGCTGCTTCTAGGAGAAATCCACAGAGAATTCATTGGCACTCCGACACACCAAAAGGAGCAAATTCAAGAAGAATTCTTCTCAGCAAAATGTTGTTCTCTAAAAAAGAAAGATCTTGCGAAACATTTTGAAAGACAGACGAGAAGATATTATGCGCTAAACGGACTTAATAATCCAAGCCTGAAGCACGTCTATCTATCGTCTATTGATGATTATCTTAGTCAGCAGACTAAGTTATACATCAGAGATCAAGGACAAACAATTGAAGAAATCTCCATTGGCCAAATCCAGCAATATGTCTTCAGAACTCTCGAAAAACTTTGCAAGCAGAAGGAGTTCTGGATGGAGTTTATGGATCAATCCAAGCAACTATCGAAAATATGTGCAAGACCAGATCTATCGATCAAATGCTCGAAGTCCAAGAAATCATGCTCTTGTGAGTCTAATGGAAAGCGCAAGAAATTCAAAAAGCGTTTCTCAAAACGCTCACCAACCTTCAGGCGCAAAAGATTCTTTCGAAAGAAAAGAAGCTTCAAGAAGTCAACAAAGTGCTTTCTGTGTCGAAAAGAAGGACATTATGCTAAGAATTGTCCTAACAAGTCAAAGAAGAAAAAACAATATATAATCAGCTCGATATCAAAGATCGCACCAGATATTGACATCGACACCCACGACTTAGAGTCAGTTCTATCCTATGATAGTGACGACAGCGGAGCCATTTGTGGATACTCCGACTCCGACTCTGATGATTCCTCTGAATCATCTCACGAGGAAGACGAAGACTGCTGCTTCAAAATCACAGAGATACCAAAAGAAAAAGAAAAATACCCTCCGCATCTTCAGGTGAAGATCTCTGATCCAGCCCATAAAGAGAAACCGGTCGATGCCATCGCATTCATAGATACTGGGGCCCACACGACGATAATAAATCCAAAAATTCTCCCGTCTTCTATGTGGCTACCGCATCAACAAGAATTTCGTGTGGCAAATTCAGGATCATTATCCATCAAACTCAAATCAAAGCCAATCACAATTGAGCTTTTTCCAGGATGCCGAATCACGACTAGAGTCCTTGGGTCAACAGCACCAGGCAAAGACGTAATATTAGGGTGGGACTCATATTGCACTCTCAAGAAATCGTTCAACATCTCGATCGAACCAGAAGGCATACGGTGGAAGAATTTTTACAAATCCTTCACAACAGTACCGCGACTTTTTGCAGTTGAAGAATATGTCTCCCAAGAATACGCGAGAATCAAAGAAGAGATGACAAAGTATTCCTGTGCAGATTCTCATACGGAATTCCTTCAAAAGTGCAATAAACCGCTATGGCTCAACTCCCAGTTCTTTGTCTCGTTACCTTTCAAAGAAAATATTCTGACCACGCCGACGAAAGCTAGTCACGCAGGAATGCCACCAACCCTTTTAAAGCAAGCTAATGAAGAATGTGATCAACTAGTAGAGCAATGAGTAGTTTCAAACACGACTTCTCCATGGGCATGTAAGGCATTTTACGTCAACAACCGTGCAGAACAAGCAAGAGGAAAACT
Raphanus sativus (v1.0)
ID:
R8_LTR-Caulimovirus_88Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
2492Start:
24750542End:
24753033Strand:
->R8_LTR-Caulimovirus_88
TTGATGTATTGGTACAGCCATTGAATATCAAAAACTATGCCGATGGTGTAGCTCGAGCAAAGATACCAGAGGAAACAGAGGACTTCTTCTGGCATGAAGGTGTTCTCGATTCTGTAAAGATGTGCGAATGGGAAGTCAGGGTGAATCCCCATTGGGCTGATGAAGTGATTGCTGGGTCCATATCTTGACAGAATAGTTGACTGGTATCGAAAGATCATTTGTCTGAGACGCTCGCGTAGAGTGTTTTTGTTGATGAGTTTTTGGGCGTCTTCAGGCATGTTGGCTGCGAAGTTGTAGAAACTCTTTGAGTTAGAGCTCTCCATCATTTGTATTTCTTTTGGTGGGTTTCTACTGAGCATGTCTGCTAGAGTGTTCTTCGAGCCCTTTAAATAGACGGATTCGAAGTCGTATTTCGAAAACCACTCGCTCCATCTCAATAATTGTTGATGTGGGACCATCTTCTGCTTGAATTGTAACATCTTTGGAAAAGATGACATATCCATTTCGATTCGAAATTTATGCCCAATCAGATGAAACTCGAACTTCTCGATAGCCTTCTTGACCGCCAATATCTCTTTGAACGTGGAGTGATAGTGCATTTCAGAATCTTTAAAGCGTCCGCTTCTGTATCCACAGATTTGACGTTTCCCATTTATCTCTTCAAATAAAATAGCTCCCCAATATTTGTCACTCGCATCAGTCTGCAGTATGCGTGTTCCTGTGGAAGGAATCTTTAAAGGTGGTAGCCTCTGCACCTCTAGTTTTAGGCTTTTGATTGCCTCGGTTTGTCGGTTTGCCCATTGAGGTGGATTCTTTGTCAGCATCTTCTGGAGTGGTCTTGTCAGTTGCGAAAGTTGCGGGATGAAGTCGCTTACATAATTGATTACACCAAGAAATTGCTGGACTTGTCGCTTAGTTAGGTTTTCGTCGGGAAAATCGAGAAGTGTCGTAGCTAAATGGGCCTGAGGTGTAAAGTTGCCATCTTTTATCTGCATTCCAAGGAATTCGATGTCGGGCTGGGCTATGACCATTTTGCGGGCCGATAGCTTGATTCCATACTGTAGGATGATACTTTGGAACTGCTGAAGGAGTTGAACATGCTCTTTCTCATTTGACGAGAACAGCAGGATGTCGTCTATATATATCAAAGCTGATTCGAGAAGAGGCTTGAATATACGTAGCATTGCCTCCTGAAACAGTGACGGTGCTGTCTTTAGGCCAAAAGGTAGGACATTCCATTGAAGGTGCCGATTTGGTAAACAAAATGCGGTCTTGTATCTTTCTTCTGGTTGAACGCCAAGTTGCCAAAATCCAGACTTGAGGTCAAACTTTGAGAATACAGTTGCTCCTTGAAGGTGCTGAAGAAGTGCCTTTTTGTTTGGTAGAGGAAACTTGAAGTCTTGGAGGAATTGGTTTAGTGGCTTGTAGTCAATTACTAGCCGGAGTTTTCCTCTTGCTTGTTCTGCACGGTTGTTGACGTAAAATGCCTTACATGCCCATGGAGAAGTCGTGTTTGAAACTACTCCTTGCTCTACTAGTTGATCACATTCTTCATTAGCTTGCTTTAAAAGGGTTGGTGGCATTCCTGCGTGACTAGCTTTCGTCGGCGTGGTCAGAACATTTTCTTTGAAAGGTAACGAGACAAAGAACTAGGAGTTGAGCCATAGCGGTTTATTGCACTTTTGAAGGAATTCCGTATGAGAATCTGCACAGGAATACTTTGTCATCTCTTCTTTGATTCTCGCGTATTCTTGGGAGACATATTCTTCAACTGCAAAAAGTCGCGGTACTGTTGTGAAGGATTTGTAAAAATTCTTCCACCGTATGCCTTCTGGTTCGATCGAGATGTTGAACGATTTCTTGAGAGTGCAATATGAGTCCCACCCTAATATTACGTCTTTGCCTGGTGCTGTTGACCCAAGGACTCTAGTCGTGATTCGGCATCCTGGAAAAAGCTCAATTGTGATTGGCTTTGATTTGAGTTTGATGGATAATGATCCTGAATTTGCCACACGAAATTCTTGTTGATGCGGTAGCCACATAGAAGACGGGAGAATTTTTGGATTTATTATCGTCGTGTAGGCCCCAGTATCTATGAATGCGATGGCATCGACCGGTTTCTCTTTATGGGCTGGATCAGAGATCTTCACCTGAAGATGCGGAGGGTATTTTTCTTTTTCTTTTGGTATCTCTGTGATTTTGAAGCAGCAGTCTTCGTCTTCCTCGTGAGATGATTCAGAGGAATCATCAGAGTCGGAGTCGGAGTATCCACAAATGGCTCCGCTGTCGTCACTATCATAGGATAGAACTGACTCTAAGTCGTGGGTGTCGATGTCAATATCTGGTGCGATCTTTGATATCGAGCTGATTAGATATTGTTTTTTCTTCTTTGACTTGTTAGGACAATTCTTAGCATAATGTCCTTCTTTTCGACACAGAAAGCACATTGTTGACTTCTTAAAGCTTCTTTTCTTTCGAAAGAATCTTTTGCG
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_89Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
742Start:
19104669End:
19105410Strand:
->R9_LTR-Caulimovirus_89
GCTCTGATACCAGGATAATAGCTGTCTTTAACCGATCACGTCGTGTTGACAAAGTCTTATTGATCAGACGAGTTCGATGATTTTCCAGGTATAGGGAGCGATTCAGGCACTACCTCGGCCTTTTCGATCAAGCTCAACCACTGTTAGGATAATCACCTCCCCGAAAGTCGTGTTGACAGAGTCGTATTGACGGAAACCGATCAAGGAGAATTACAGCTAAGACATGGATCGCATCTTGAGTATGGAAGATAGGAATCAGAGCTTATCAAAGATGAGATAAGGTCTAGAAAACTAGAGAACTTTAGAGAGACATTAGAGAGAGAAACTTAGAGAGAGGTTTTTATGAAATTATTTGATGATATTTCACAAGGGGGTACACACATATTTATAGATGAGAATAAGGCGTTGACATAAGCGCTTACCTCATTGCTTGCATCATGCTTACATAGCGATTACATCATCGCTTGCATCATGCTTACCTAGCGATTACATCATCGCTTTATTTGATGAAAAACACACATATTTTACATAATTATACATTAATAATGGATGCTTATTTTAATGATCAATCTCGAACTCGATGATATGCTTGTCGCAGCATCCGTAATATTCGCCTGGGCAGACGTACTCTTCTTCATAATCTTCAATTATTTTTGCTGCTTCTTCGTCAATTTCAATGTTGAACTTCTTTTCTATCTCGTCGATATTCATCTCGTCGTCTGGAAGTTGCGCATCTTGAAAG
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_90Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
5618Start:
19105544End:
19111161Strand:
->R9_LTR-Caulimovirus_90
ATTGGAGATCTTCATCAAGATCCATCTGGTAATCAATAGGGTAATAGAATCAATTCGGGTTGAAAGGAATAGGGAATGTCTGAATTGCATTGTTGAGTCGGAATGCATGAGTCTGGAAGTCTTCGTAGGCTTTGGTGTCATTGAGGTTGAAATCAGGTCTGACTCCTCTTTGATAGTCGTTGTGGTGGATGAGTGTAGGTAGTGCATGGACCTTTTTCGTTTTGTTGTTGACTTGAACAGGACGGTGAAAGAAATAGATGGTGTGAGGGTTGAAGAAGGGGTTAAGACCTCTTTGGCCTCTTAACTTCTTGAATGGTAATCCAGTTGCTTTTGCTGATTTTCTTAATTTACCATTCCAGGCAGATAACGGCGCGAACCATGTTAAGAAAGTGGAGAGGCATTCGTTGTGTCGACGGAGAGGGTCGTTGAATTGAGCATTGATGTATTGGTACAGCCATTGAATATCAAAAACTATACCGATGGTGTAGCTCGAACAAAGATACCAGAGGAAGCAAAGGACTTCTTCTGGCATGAAGGTGTTCTCGATCCTGTAGAGATGTGCAAATGGGAAGTCAGGGTGAATCCCCATTGGGCTGATGAAGTGATTGCTGGGTCCATATCTCGACAGAATAGTTGACTGGTATCGAAAGACCATTTGTCTGAGACGCTCGTGAAGAGTATTTTTGTTGATGAGTTCTTGGGCGTCTTCAGGCATGTTGGCTGCGAAGTTGTAGAAACTCTTTGAGTTAGAGCTCTCCATCATATGTATTTCTTTTGGTGGGTTTCTACTGAGCATGTCTGCTAGAGTGTTCTTCGAGCCCTTTAAATAGACGGATTCGAAGTCGTATTTCGAAAACCACTCGCTCCATCTCAATAATTGTTGGTGTGGGACCATCTTCTGTTTGAATTGTAACATCTTTGGAAAAGATGACATATCCATTTCGATTTGAAATTTATGTCCAATCAGATGAAACTCGAACTTCTCGATAGCTTTCTTGACCGCCAATATCTCTTTGAACGTGGAGTGATAATGCATTTCAGAATCTTTAAAGCGTCCGCTTCTGTATCCGCAGATTTGACGTTTCCCGTTTATCTCTTCAAATAAAATGGCCCCCCAATATTTGTCACTCGCATCAGTCTGCAGTATGCGCGTTCCTGTGGAAGGAATCTTTAAAGGTGGTAGCCTCTGCACCTCTAGTTTTAGGCTTTTGACCGCCTCGGTTTGTCGGTTTGCCCATTGAGGTGGATTCTTTGTCAGCATCTTCTGGAGTGGTCTTGTCAGTTGCGAAAGTTGCGGGATGAAGTCGCCTACATAATTGATTACACCAAGAAATTGCTGGATTTGTCGCTTAGTTAGATTTTCGTCGGGAAAATCGAGAAGCGTCGTAGCTAAATGGGCCTGAGGTGTAAAATTGCCATCTTTTATCAGCATTCCAAGGAATTCGATGTCGGGCTGGGCTATGACCATTTTGCGGGCTGATAGCATAATTCCATACTGTAGGACGATACTTTGGAACTGTTGAAGGAGTTGAACATGCTCCTTCTCATTTGACGAGAATAGCAGGATGTCGTCTATGTATATTAAAGCCGATTCGAGAAGAGGCTTGAATATACGTAACATTGCCTCCTGAAAAAGTGACGGTGCTGTCTTTAGACCAAAAGGTAGGACATTCCACTGGAGGTGCCGGTTTGGCAAACAAAATGCGGTCTTGTATCTTTCTTCCGGTTGAACGCCAAGTTGCCAAAATCCAGACTTAAGGTCAAACTTTGAGAATACATCGCTCCTTGAAAGTGCTGAAGAAGTGCTTTTTTGTTTGGTAGGGGAAATTTGAAGTCTTGGAGAAATTGGTTTAATGGCTTGTAGTCAATTACTAGCCGGAGTTTTCCTCTTGCTTGCTCCGCACGGTTATTGACGTAGAATGCCTTACATGCCCATGGAGAAGTTGTGTTTGAAACTACTCCTTGCTCTACTAGTTGATCGCATTCTTCGTTAGCCTGCTTCAAAAGGGTTGGTGGCATCCCCGCGTGACTTGCTTTTGTCGGTGTGGTTAGGACGTTTTCTTTGAAAGGTAACGAAACAAAGAACTGGGAGTTGAGCCATAGTGGTTTGCTGCACTTATGAAGGAATTCCGTATGAGACTCTGCACATGAATACTTCGTCATTTCTTCTTTGATTTTTGCATATGCCTGAGAAATGTGTTCTTCAACTGCGAAAAGTCGCGGTACAGTAGTGAAAGATTTGTAGAAATTCTTCCACCGTATGTCCTCTGGTTCGATCGAGATGTTGAATGACTTTTTGAGAGTGCAATATGAATCCTACCCTAATATTACGTCTTTGCCTGGTGCTGTTGACCCAAGGACTGTAGTCGTGATTCGGCATCCTGGAAAAAGCTCAATTGTAATTGGCTTTGATTTGAGTTTGATGGATAATGATCCTGAATTTGCCACACGAAATTCTTGTTGATGCGGTAGCCACATAGAAGACGGGAGAATTTTCGGATTTATTATCGTTGTGTGGGCCCCAGTATCTATGAATGCGATGGCATCGACTGGTTTCTCTTTATGGGTCGGATCAGAGATCTTCACCTGAAGATGCGGAGGGTATTTTTCCTCTTACTTCGGTATCTCTGTGATTTTGAAGCAGTAATCTTCGTCTTCCTCGTGAGATGATTCAGAGGAATCGTCAGAGTCGGAGTCGGAGTCGGAGTATCCACAAATGGCTCCGCTGTCGTCACTATCATAGGATAGAACTGATTCCAAGTCGTGGGTGTCGATGTCAATATCTGGTGCGATCTTTGATATCGAGCTGATTAGATATTGTTTTTTCTTCTTTGACTTGTTAGGGCAATTCTTAGCATAATGTCCTTCTTTTCGACACAGAAAGCACTTTGTTGACTTCTTGAAGCTTCTTTTCTTTCGAAAGAATCTTTTGCGCCTGAAGGTTGGTGAGCGTTTTGAGAATCGCTTTTTGAATTTCTTGCGCTTTCCATTAGAATCACAAGAGCATGATTTCTTGGACTTCGAGCATTTGATCGATAGATCCGGTCTTGCACATATTTTTGATAGCTGCTTCGATCGATCCATAAACTCCATCCAGAACTCCTTCTGCTTGCAAAGTTTGTCGAGAGTTCTGAAGACATACTGCTGGATTTGACCAATGGAGATTTCTTCAATCGTTTGCCCCTGATCTCTGATGTACAACTTGGTCTGCTGACTAAGATAATCATCAATGGACGATAGATAGACATGCTTCAGGCTTGGATTATTGAGTCCATTTAGCGCATAATATCTTCTCGTCTGTCTTTCAAAATGCTTCGCAAGATCTTTCTTTTTTAGAGAACAACATTTTGCTGAGAAGAATTCTTCTTGAATTTGTTCCTTTTGATGTGTTGGAGTACCAATGAATTCTCTGTGGATTTCTCCTAGTAGCAACGGAATTGTTGTCTGATAGACTTGCTGTTGTCTGTATTCCCCGAGGGAATTCCACCATTCCTTAAGTGCGCCAGACAGTCTCGCTGTAAATTGTTGAATCACCAAATGCAGGGGAGACGTAATAGCTTCAGAGTTCATCCATGCATGGAATTCGTCCAACCGGTCATTCCATTTGTCGAAAGGAATGTCGTCGAACGTAAATACCATAACCTTCGAAGAGAAACGCTTATTGCGAGTTTCTTCTCTTGGAGCTTCATAATTCATGTCTTCCTCACTTGAATATACCTCGTTGACATTTGGCTCTTGTTTAGGAGTACTTGATCCTTCACCGATTACATACTGTTTTGGGAGCGATTCTTCATCAGAATCTAAATCGTATTCACTGGAGCTTGAGTCTGAGAAGTGCTTGATGTTGACGATGGGGGAGGGCTGAGTTTCTTCTTGAGGAACTGGTTGATGCTCCAGTAGATTGGTGGTTTGGACAATATTATCTAGCAAACTAGTCATCGAAAATTCGATGATGCCGATATCTTTTCCTTTGTTGTCCACCGACTCATGGCTAGATGATGACGTAAGAGTTGGCCTTTTCGGTGGGTTGACTTGAAATTCAGCTTCTTTGTGCCTTCTTGATTTTGATCTGGTTTGTTTTGGCTTTTCTGCGAAGATCGAAGATGAGCCGTATCTTGATGTAAAGGTTTCATCGGAGGATAGAAAACCAGGTAGTGGCGATCTCATTTTTGGGGTTTGGTAGCTCGAAAGGAATCCTGGAGAGTACGATCCTTGGTATATCGGTAAATCTGTCGATGAACTCCCCAAAGGGTTGAAGTAAGAGTCTTTATGTCGTTGATTGTAGATCAGACTCTCTAAGCTCCGTTGGAGGTCTTTTAATTGATTTTTGAGGCTTGCCGTCTCTGCTTCTTTGCTTCGAAACTGAGTCGTGTCAACCATCATGTGCTTCGCCATCGTCATCATCTCCTGATAGAGACTGTTAAGCCGACCGTGTATTTCTGTTATTGAGTTTTGAAGGCTAAGATGCCTTTTGTTAACTCCTTCAGTCAGCTGATCGACCTTTTGGTTTATTGCTGTTAACAGATAATTCTGAGCAAGAGAATTTTTTGTTTGCCAGTTTAGAACCTTTTATGCTTGGCTAAGCTGAGTAGGTCCAGAAGAACCTATTGCTGCAGAAAGGATTTTTGGGGTATGAGCAACGTCGTCTTTGATGAAATCTTCTGGTGGAGGAAAGTTGTTTGGGCTGATCATCAATAAGTCTTGCTCTGGTTCTTTCTTTGCACTGGGGTATTCAACTATAAAGTCATACCTATCATCGCCTAGCGGACCAACAGAAGGATCTCCTTCGAGATACCTTTTGTATAGAGGGTCCTTTTTCTTTCTTCTTCGTCTTCGTTTTTCATCGTCGGATTCGTAGCTCCAGTAGGCATCTGAACAGGCTGTGCAGTTGCAGATGTCAAAGCGGCAGTGTCCATCTTCATCTATGAAAGGATAGACTATATTTCCGTCTTTGTCGAATCGACATGACCTTGGGATGTCTTGTTTCTTAGCTGGGCCATAGAAATCTCTTTCGTCAACCTCGATGGCAAATTGAGTAAATAATTGTTTCCTGAACGACGAAGATCTTGGTTTTTCAAACTTGATTTCCGTTGTTCCATCTTTCCGTGAATGAAAGCTAACGTCTGAAGATTGAACTGGCGATTGAGTGGCTTGATGAAGCTTCTCGTAGCTTGTCACCCAAGACTCCGGTAGTCGTCTTATCAGCTCTTCGCGTGATATCTGGCGAGGAATTTGTATCGAATTTGGTGCCTGAGATGCTGATGTAACTTCGAGATACAGGGCTTCGTCAGACGAAGGAAGTACAAGATCGAGAGTGTGATCTTGAATTCGGTAGATGATCTGATGATGCAAAGTGGCTGCCACACTCTTCTCTTGCATAGGTGCTCCAATTAGTTGAAGCTGTACCTTGAGCGTCTTCATCAGATTTGGATCTTGTAGCGAAACATTAAAGTTTGGAAACAGCGTTACGAATACTGTTTCTGCATTTAATGTTGTCTGGACTGTTCCGATACATGCTTGTTGATATGACTTTAATCGGGAATCGATTAAAGCTATCCTAGCAACGACTGGTAGACCTTTTCTGGCGTGTAAAGTCAAACCAATTCTTACTACACCGA
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_91Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
644Start:
19506612End:
19507255Strand:
->R9_LTR-Caulimovirus_91
TGAAGGCTCTTCTGACAATTGAATAGGCAATTGGGTAGCTTGATGAAGCTTTTCATAACTCATCACCCATGACTCCCGTAGTCGGTGCAGTAACTCTTCGCGAGAAATATGTCGGGGAATCTGTATTGAGTTGGGTGCTTAGGATGCTTGAGATATAGGGCAGCATCGGATGAGGGTAACACAAGATCAAGAGCGTGATCTTGAATTCAGTAGACGGTTTGGTGATGTAGGGTAGCTACTATACTCTTTTCTTGCATAGGTGCTCCGATTAGTTGAAGTTGAACCTTGAGCGTCCTTAAGAGATTTGGGTCTTATAATGAAACATTAAAGTATGAAAACGTTATTAGTATAATGTTCCTGCATTTAATGTCGTTTGAACCGTTCCGATGCAAGCTTGTTGGTATGACTTTAATCGAGAGTCGATTAAGGCTGTTCGGGCTATGACTGATAGACCTTTTCTCGCATGTAAGGTCAAACTAATTCTTACTACACCAAAGTGAATGTGAGTATAACCTTGCTGCTGCCACAATCTAGATAGGTTCTCCAGGATGTTTAGAGAGATAAATTATTCTTCTTCCATGGCTGAAAATTACCAGGATGAGAACTTGTCTGACTGGACATACTCCATTCCGGTTGGAGGACGG
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_92Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
393Start:
19507271End:
19507663Strand:
->R9_LTR-Caulimovirus_92
ACCGAGAAGGCGCTAGGCTTTTTTGCAAAGTATTCGTATGGATTCACCAGATGAAATGTAGTTTTCGGTAGTTTATCGCTCGGAACATACTCGATCTTGTATAGGGAATTAATGTTAGAGGAGGAATAGCGGCTTTTACTTTCAGTAAGAGTGGAAATTTTAAATTTAAAATCGATAGAGGAAGGATGCGAAGTAGACATTTTTGAGAGAGTTGTTTTCCAGAATTCTTAAAACAATCGGTCATAAACAATGATTATATCGACCATACCGCAAGCATGTAGGCTATGATACCATTTTGCACAGAATAAGCGGTCGTCCTATTGACAAAATCGTGTTGACAGATGAGGGTCGGTAATTTCGAGGTACATGGAGCGATATTGGTACTATTCTCTG
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_93Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
710Start:
19510852End:
19511561Strand:
->R9_LTR-Caulimovirus_93
GGTTTTTAGAATTTGATCTCGGTTGTTTCATCGTTTCGAGAATGAAAACTGACTTCTGACGATTGAATAGGCAACTGGGTAGCTTGGTGAAGCTTGATGAAGCTTTTTATAAATCATCACCCATGACTGGTAGTCGGCGCATTAACTCTTAGCGGGAACTCTATCGGAGAATATGTATTTAGTTAGGTGCTTGGGATGTTGATGATACTTCGAGATATAGGGCTTCATAGGATGAGAATAACACAAGATCAAAAGCGTGATTTTGAATTTGGTAGACGATCTGGTGATGTAGGATAGCTACTACACTCTTTTCTTGCATATGTGCTCCGATTAGTTGAAGTTGAACCTTGAGAATCCTTAAGAGATTTAAGTCTTATAACAAAACGTTAAAGTTTGGAAATAGTGTTATAAATAATGTTCATGCATTTAATGTCGTTTGAACCATTCCGATGCAAGTTTGTTGGTGTGACTTTAATTGAGTTGATTAAGGTTATTCGGGCTATAACTGGTAGATATTTTCTTGCATTGAAGGCAAAATCAATTCTTACTACACCAAAGTGAAGGTGAGTATAACCCTGCTGCTGTAACAATCTAGGTAGGTTCTCCAGAATGTTTAGAGAGATAAATTGTTCTTCTTCCGTGGCTGGAATTTAGCAGGATGAGAACTTTCTGGACTGGACATACTCCATTACTTTCTGGTTGGAGGACGG
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_94Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
397Start:
19511566End:
19511962Strand:
->R9_LTR-Caulimovirus_94
ATGAGTTTACAAATGCCCTTGACCAAGAAGGCGCTAGGCTTTTTTCAAAGTATTCATATGGATTCACCAGAGGAAGGGTAGTTTTTACGTAGTTGACCACTCAGAACATACTCAATCTCGTATAGGGAATTAATATTATAGGAGGAAAAACGGCTTTTACTTTTAGGAAGAGTGGACATTTCAAATTGAGAATCGATAGAGGAAGGATGCGAAATAGACATTTTTAAGAGAGTCATTTTCCGGAATTCTTAAAACAATCAGTCATAAACAATGATTCTATCGACCATAACGCAAGCATGTAGGCTCTGATACCATTTTGCACAAAATAAGCGGTCGTCGTATTGATAAAATCATGTTGACAGACGATGATCGGTAATTTCCAGGTATAGGGAGAGAT
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_95Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
135Start:
20487650End:
20487784Strand:
+>R9_LTR-Caulimovirus_95
ATCATGTCGTTTGTGGACTGAAGAAGAACAGTTCATATCATTGAACATTCCGGAGCACCTATCCAGATTATGGCAACAACAAGGCTACACCCATCTCCACTTCGGTGTAGTAAGAATTGGTTTAACCTTACACGC
Raphanus sativus (v1.0)
ID:
R9_LTR-Caulimovirus_96Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
137Start:
25068722End:
25068858Strand:
->R9_LTR-Caulimovirus_96
TTCATTTGAACCGGATTAGTTTTTGTGAGAATTTTGTCTTCAAGATTTTTTTTATAATAAGGTAAATCAGCAATATGTTATTTTCGATTCCAAAAATCAGTAGGTAGATCTGAATAATTTTTTTTCATAAATAATTT
Raphanus sativus (v1.0)
ID:
RUS00067_LTR-Caulimovirus_97Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
287Start:
155619End:
155905Strand:
->RUS00067_LTR-Caulimovirus_97
GTCGTGTTGACAAAGTCTTATTGATCAGACGAGCTCGGTGATTTTCCAGGTATAGGGAGCGATTTAGGCACTACCTCGGCCTTTTCGATCAAGCTCAACCACTATTAGGATAATCACTTCCCCCGAAAGTCGTGTTGACAAAGTCGTATTGACGGAGATCGATCAAGAAGAATCACAGCTAAGAGTTGGATTGCATCTTGTGTATGGAAGATAGAAATCAGAGCTTATTAAAAAAGAGATAAGGTCTGGAAAACTAGAAAACTTTAGAGAGACATTAGAGAGAGAAA
Raphanus sativus (v1.0)
ID:
RUS00109_LTR-Caulimovirus_98Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
94Start:
47347End:
47440Strand:
->RUS00109_LTR-Caulimovirus_98
GGTATTGTTGTCTGATAGATTTATTGTTGTTTGTATTCACCGAGTGAGTTTACCATTCTCTAAAGAAGTGCACCTGTAGTTTTGCGGTGAATTG
Raphanus sativus (v1.0)
ID:
RUS00128_LTR-Caulimovirus_99Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
206Start:
121182End:
121387Strand:
+>RUS00128_LTR-Caulimovirus_99
ATGAATTATGAAGCTCCAAGAGAAGAAACTCGCAATAAGCGCTTCTCTTCGAAGGTTATGGTGTTTACGTTCGACGACATTCTTTTCGACAAATGGAATGACCGGTTGGACGAATTCCATGCATGGATGAACTCAGAAGCCATTACGTCTCCCCTGCATTTGGTGATTCAACAATTCACAACGAGGCTGTCTGGCGCACTTAAAGA
Raphanus sativus (v1.0)
ID:
RUS00128_LTR-Caulimovirus_100Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
816Start:
121385End:
122200Strand:
->RUS00128_LTR-Caulimovirus_100
AGATGTGGAGGGTATTTTTCTTCTTGTTTCGGTATCTTTGTGATTTTGAAACAGCAATCTTCGTCTTCATCGGGGGATGATTCAGAAGAATCATCAGAGTCAGAGTATCCACAAATGGCTCCGCTGTCGTCATTGTCATAAGATAGAACTGATTCTAGGTCGTGGGCGTCGATGTCAATATCTGGTGCGATTTTTGATATCGAGCTGATTAGATACTGCTTCTTCTTTTTTGACTTGTTAGGGCAATTCTTAGTATAATGTCCTTCTTTTCGACACAGAAAGCACCTTGTTGACTTCTTGAAACTTCTTTTCTTTCGAAAGAATCTTTTGCGCCTAAAGGTTGGTGAGCGTTTTGAGAAACGCTTTTTGAATTTCTTGCGCTTTCCATTCGAATCACAAGAGCATGTTTTCTTGGACTTCGAGCATTTGATCGAAAGATCTGGTCTTGCACATATTTTTGATAGTTGTTTCGAACGATCCATAAACTCCATACAGAACTCCTTCTGCTTGCAAAGTTTGTCGAGAGTTCTAAAGACATACTGCTGGATTTGACCAATGGAGATTTCTTCAATTGTTTGTCCTTGATCTCTGATGTACAACTTAGTATGCTGACTAAGATAATCATCAATAGACGATAGATAGACATGCTTCAGGCTTGGATTATTGAGTCCGTTTAGTGCATAATATCTTCTCGTTTGTCTTTCAAAATGCTTCGCAAGATCTTTCTTTTTTAGAGAACAACATTTTGCTGAGAAGAATTCTTCTTGAATTTGCTCATTTTGATGTGTTGGAGTGCCAATGAATTCTCTGTGGATT