ID Class Order Superfamily Length Start End Strand View
RUS07213_LTR-Caulimovirus_641 RetrotransposonsLTRLTR-Caulimovirus19911711369+
RUS08923_LTR-Caulimovirus_642 RetrotransposonsLTRLTR-Caulimovirus143245387-
RUS08923_LTR-Caulimovirus_643 RetrotransposonsLTRLTR-Caulimovirus37713501726-
RUS08923_LTR-Caulimovirus_644 RetrotransposonsLTRLTR-Caulimovirus14617611906-
RUS09260_LTR-Caulimovirus_645 RetrotransposonsLTRLTR-Caulimovirus15252203-
RUS09300_LTR-Caulimovirus_646 RetrotransposonsLTRLTR-Caulimovirus35612211576+
RUS09851_LTR-Caulimovirus_647 RetrotransposonsLTRLTR-Caulimovirus699251949+
RUS10705_LTR-Caulimovirus_648 RetrotransposonsLTRLTR-Caulimovirus213702914-
RUS11056_LTR-Caulimovirus_649 RetrotransposonsLTRLTR-Caulimovirus18215731754+

< 29 30 31 32 33 > Total 33


Raphanus sativus (v1.0)

ID:

RUS07213_LTR-Caulimovirus_641

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

199

Start:

1171  

End:

1369

Strand:

+

>RUS07213_LTR-Caulimovirus_641

GAAGAGCTAGGGTTGCCAGAGCAGTTGTATCAGACAGGGTACGAACCAACTGGACGTAAACGGATTAATAATTACTTCAATTTGAGGTGGATTGAGGTTATCAAAGAATCACTAACCGTTGCGCAGCAGGAGATGTTAGCAGAATCCCAATTCCGCCTGATAATGCAGATGGGGTCCCATACATTTTCAGTTATGTTTG

Raphanus sativus (v1.0)

ID:

RUS08923_LTR-Caulimovirus_642

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

143

Start:

245  

End:

387

Strand:

-

>RUS08923_LTR-Caulimovirus_642

TCTTGACTCTCTTTAGTTTTCATCATGATTTCTCATCGATTTCGTCATCTCCACACCCTAATCAACCATTAAAACCTTCGATTCACATAGGAGAAGTGAACCCGAAACCCAATCGACGAACCCTAAACCCCCTTTCTAAAATT

Raphanus sativus (v1.0)

ID:

RUS08923_LTR-Caulimovirus_643

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

377

Start:

1350  

End:

1726

Strand:

-

>RUS08923_LTR-Caulimovirus_643

AATGTATTATTCTGAAAGTTTGTTGTTTGTAAATGTAGAAAGTATAAGTATGCCATAACATGAAAACAAAAATCTGCCAAATTTTAAAAAGTCTACGAGATAAATCTGTATGCTAGTACAAAATTTTCGACATATTAGAAAATCTGCTGTTATAGGATACAAATCTGCCACTAAAAGTCTACCAACGTAAAATAAATCTGCGAGTGCAATCAAATCTGCCATCATGTGAGGTATACTTTTTCTGAAAGTATGTGATGATATTAAGTTTGCGATACTAAGTCTTCGGTAAAAAATAAATCTGCGACGGTTTATTAAATCTGCCATCAAGTATTGCAGTTTTTTCACAGCAGATTTATTTTACTGTTTCGTTAAAAAAA

Raphanus sativus (v1.0)

ID:

RUS08923_LTR-Caulimovirus_644

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

146

Start:

1761  

End:

1906

Strand:

-

>RUS08923_LTR-Caulimovirus_644

CTGTAAATTTTTTTTTTTAACAAAGAAAATAAGGGTAGTTTAGGCATAAAAAACATTCTAGTAAATTAAAAAAAATCTATGTTATTCTAGTGATAATAACATAATTTCACGTTATTTTAGTAATCTTCCCTATATTTATTCTATAT

Raphanus sativus (v1.0)

ID:

RUS09260_LTR-Caulimovirus_645

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

152

Start:

52  

End:

203

Strand:

-

>RUS09260_LTR-Caulimovirus_645

ATGATTTTGACATAATTTAACCAGTGACTTTTTGCCTCCAATCCATCCGGTAGTACCCTTGCGAGAAAAAGGTTTCCGGTTTGTTTGACATAAAGGAAGAACGTGTTTCATTTGTGACCCACAATTACAATCACCTAAACAATGAAGCGCGT

Raphanus sativus (v1.0)

ID:

RUS09300_LTR-Caulimovirus_646

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

356

Start:

1221  

End:

1576

Strand:

+

>RUS09300_LTR-Caulimovirus_646

GGCGTCTTAAATACATATTATTACTATGTTATCCTTCTCTAATTACCGGGTGACCTGAAAGGAAAAAATTAAAAAAAAAGAAATTTTACCTGCAAACTTAATCGTGTCTTTTCTCCTTCCACAAAAAGTTTCTCTTTGGTTTCATCCTCCCCGTCTCTCCCTCTCAAAAATCTCCATCCCCAATTCTGCTATCGCTACTCCACACACAGTTCGCCGGTGCATCTAATCAGAGTTTACTCTATCTCAGTCTCTCTCTCTCCCAATCGATTGGTGGTTCTTTTGGTTACGGGCTCGGCGGAGGAGAATAATACCGCCGGTGGTTGTGTACTCCGATATAGTTGCTTCCTGCCACTTAC

Raphanus sativus (v1.0)

ID:

RUS09851_LTR-Caulimovirus_647

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

699

Start:

251  

End:

949

Strand:

+

>RUS09851_LTR-Caulimovirus_647

ACTAGATCCCGGATCTCAACTATCATCTATTGATCACGGAAAAGAATCGATCGATATGACTTTTGTTTAATCGATCGATACATTTTTCAAACTATCGATCGCTACAACAATGGTTGTGTCGATCGACGGTAATTCTAGCAAGTTTTAGCGGATTGGTTTGATGTTGTTCTCTAACCATCTAGACCACCTTTCGCATGTGTCTAGTCAGTTAGATCACTCTAGTTTATTGAATTTAGAGTATACAGTAGGTTTTCTCATCAATCCTAAGATCTAAATTTAAGGGTGATCAATCCCAAATCAAGTGTTAAGAGCAACTAGAATGAAAGAACTAATTTTTAACACCCTAACAGTTATCACAAACTCATCACATGATCTATCCTTATGAGAAACCTAAATCTAACAATTAGGTTTACTCAGACATATTCATGAGAGACAAAATCATGATGGTTTGAATAAATCTTAATATAAAATGAGGAACACAAAGAGTATGAGTAGATATAAAAAGGGAGTTCAAGATCTTCTCTATTTTGTAGTCTCAGATCTATCTCCCCAACTCTAACTCTTCTCCAAAGGTAGCCAAATTGCTTCTCTTCTCCACTAGGTCTCTAGGCAAGTCTGCTTCTACAATGATACAAAACCCTAATATATAAAGCCTAACAGGCAGCCAGGGACTTGATGAGTAAATAGCATACTTTGTGA

Raphanus sativus (v1.0)

ID:

RUS10705_LTR-Caulimovirus_648

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

213

Start:

702  

End:

914

Strand:

-

>RUS10705_LTR-Caulimovirus_648

AACATAACCGAGAAGGTATGGGACCCCACATGCAAGACTTGCCCAAACTAGGACGCATCCAACATGGTCAGATCTTCATCCTCTAATGCATTCAGTATCACCTCAATCTAACGGAGATTGAAATAGTTGTTAACCCTCTTCTTGTCCTGCGGTTCAAAGCCTGTCTCAAAAAAATCTACTTGGAAGGCCTAACTCGTCCATACCAAACCTGAA

Raphanus sativus (v1.0)

ID:

RUS11056_LTR-Caulimovirus_649

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

182

Start:

1573  

End:

1754

Strand:

+

>RUS11056_LTR-Caulimovirus_649

ACGTCGCTTAATATATAAACTGTAACTGGTAACTTATTAAAGGAGAGGGCATCACCGGATAAAATAGGTACAAAAAGCCTGACATTAAATTATGTCAAAATCATAGCTATATTTTTAATTTCACTTCAACAAAAAGCTATTTGGCCAATTAGCCCTAAATTAATTTAATAGATAAAAAAAAA