ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Cassandra_41 RetrotransposonsLTRLTR-Cassandra911272761212727702+
scaffold_1_LTR-Cassandra_42 RetrotransposonsLTRLTR-Cassandra1331272768412727816-
scaffold_1_LTR-Cassandra_43 RetrotransposonsLTRLTR-Cassandra3051292669812927002-
scaffold_1_LTR-Cassandra_44 RetrotransposonsLTRLTR-Cassandra3101341698913417298-
scaffold_1_LTR-Cassandra_45 RetrotransposonsLTRLTR-Cassandra1111341731313417423-
scaffold_1_LTR-Cassandra_46 RetrotransposonsLTRLTR-Cassandra3101341748313417792-
scaffold_1_LTR-Cassandra_47 RetrotransposonsLTRLTR-Cassandra3261369664813696973+
scaffold_1_LTR-Cassandra_48 RetrotransposonsLTRLTR-Cassandra3081373071513731022-
scaffold_1_LTR-Cassandra_49 RetrotransposonsLTRLTR-Cassandra1111373103813731148-
scaffold_1_LTR-Cassandra_50 RetrotransposonsLTRLTR-Cassandra2961373122213731517-
scaffold_1_LTR-Cassandra_51 RetrotransposonsLTRLTR-Cassandra2611374870413748964-
scaffold_1_LTR-Cassandra_52 RetrotransposonsLTRLTR-Cassandra3231379950913799831-
scaffold_1_LTR-Cassandra_53 RetrotransposonsLTRLTR-Cassandra2811409801714098297+
scaffold_1_LTR-Cassandra_54 RetrotransposonsLTRLTR-Cassandra2981428622714286524+
scaffold_1_LTR-Cassandra_55 RetrotransposonsLTRLTR-Cassandra831428649914286581+
scaffold_1_LTR-Cassandra_56 RetrotransposonsLTRLTR-Cassandra3081447205714472364+
scaffold_1_LTR-Cassandra_57 RetrotransposonsLTRLTR-Cassandra1321447486914475000-
scaffold_1_LTR-Cassandra_58 RetrotransposonsLTRLTR-Cassandra3051462710414627408+
scaffold_1_LTR-Cassandra_59 RetrotransposonsLTRLTR-Cassandra3081469506214695369-
scaffold_1_LTR-Cassandra_60 RetrotransposonsLTRLTR-Cassandra1651472599414726158+

< 3 4 5 6 7 > Total 33


Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

91

Start:

12727612  

End:

12727702

Strand:

+

>scaffold_1_LTR-Cassandra_41

AACACCCTAATATCAGGAATTTGCTGCTGGAAGCGAAGTGGGTTTAAATATCATTTTTGCCAAATTGTATCACCAAAGTGCACTTATTTTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

133

Start:

12727684  

End:

12727816

Strand:

-

>scaffold_1_LTR-Cassandra_42

CCAAAGTGCACTTATTTTTCAGAGAATCATCTAGGGATGGTTGATATGAAAAGATAAGTGCATTCTGGTGACATATATGACCAGAACAGTTCTTATAAACCTCTTTGTATACACCACAATATACGGGGGTGTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

305

Start:

12926698  

End:

12927002

Strand:

-

>scaffold_1_LTR-Cassandra_43

CCTCTGTTAATGGGTACTACGTGTACTCCTGGTTCGTGGATCCATTCATATCTGACTGTCGGTTTGTTATAAACTTGTTTACCAACTATACATATTATCACATTATCCTTCCCCGTATTTTCTTCTCACTTGAATAGTTCCAACCATTACTTTCAATAAAATCATGTATCCTAAAACTACTCTAACTCAAATACACTTAGATGTAGAGTTTTCTCGGAATAGTTGACCGAAAAAAATTAGTGCATTTTGATAATATAAGTGAACAAATGATTTCCTTTAGAAGTTTCTGCATACACCACTATATT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

310

Start:

13416989  

End:

13417298

Strand:

-

>scaffold_1_LTR-Cassandra_44

CCACCTTTCTTAATGGGCCTCACGTCCTCTAACTAGGCCCATGAGCCCATTAATACCTGACGGCCGGTTACCTACGTCCGGGAGGCTTAAAGACTTGTTTACCCACCCTACAAATCACCACATGATCTTTCCTTGTGTTTTGGCCTCACTCACACAGTTCCGACAACCACTTCCCGGAAGGTCACCCATCCTTTGACTACTCCAGCATAAGCACGCTTAACTGTGGAGTTCTCTCAGGATCCTTGACCGAAAAGATAAGTGCACATTGGTGACATAGGTGGCCAAATCAATTCATTTAAACCTCTCTGCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

13417313  

End:

13417423

Strand:

-

>scaffold_1_LTR-Cassandra_45

ATTCTCCCCCACTAACAGACCGCAACGTCCTCGTTGCGCACAACGATCGTCACCCCCTGACAGTATAAGCCCACCACTCCACACTTGTCTGGGTTTGGCTCTGATGCCACT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

310

Start:

13417483  

End:

13417792

Strand:

-

>scaffold_1_LTR-Cassandra_46

CCACCTTTCTTAATGGGCCTCACGTTCTCTCACTAGGCCCATGAGCCCATTAATACCTGACGGCCGGTTAGCTACGTCTAGGAGGCTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATATTTGCCTGTGTTTTGGCTTCACTCACACTGTTCCGACAACTACTTCCCGGAAGGTCACCCATCCTTTGACTACTCCAGCATAAGCACGCTTAACTGTGGAATTCTCTCAGGACCCTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAAATCATTTAAACCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

326

Start:

13696648  

End:

13696973

Strand:

+

>scaffold_1_LTR-Cassandra_47

TGCGGTTAGGCTTGAATGAATTAATTGGCCACCTATATCACCAAAGTGCATTTATCTTTTCGGTCAAGGGTCCTGAGAAAACTCCAGAGTTAAGCGTGCTTATGCTGGAGTAGTCATAGGATGGGTGATCTTCCAGGAAGTGATTGTCGGAACCGTGTGAGTGAGACCAAACCACAGGGAAACATCATGTGGTGATTTGTAGGAACGGTAAACAAGTATTTAAGCCTCTCCAACGTAGCAAATTGACCGTCGGATATTTATGGGCTCATAGGCCTAGTGAGAAGACGTGAGGCCTATTAAGAGAGGTGGGCGGTCGGGGTGTTACA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

308

Start:

13730715  

End:

13731022

Strand:

-

>scaffold_1_LTR-Cassandra_48

CTACCTCTCTTAATGGGCTTCAGGTCCTCTCACTAGGACCATGAGCCCATTAATATCTGACGGCCGGTTTGCTATGTCCGGGAGGCTTAAATTCTTATTTACCGACCCTCAAATCACCACATGATTTTTCCTTGTGTTTTGGCCTCACTCACACAGTTCCGACAACCACTTCCCGGAAGGTCACCCATCCTTTGACTATCCAGCATAAGCACGCGTAATAGTGTAGTTCTCTAATGACCCTTGACCAAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCGTTTAAATCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

13731038  

End:

13731148

Strand:

-

>scaffold_1_LTR-Cassandra_49

ATTCTCCCGCACTAACAAACCACAACGTCTTCTTTGCACACAATGATTGTCACCCCCTAACAGTGTGAGCCCACGACTCCACACTTGTCTGGGTTCGGCTCTGATACCACT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

296

Start:

13731222  

End:

13731517

Strand:

-

>scaffold_1_LTR-Cassandra_50

GGGTATCACGTCCTCTCACTAGGTCCATGAGCCCATCAATACCCAAAGATCGGTTTGCTACGTCTGGAAGGCTTAAATTCTTGTTTACCGACCCTACAAATCACCACATGATCGTTCCCTGTGTTTTGGCCTCACTCACACAGTTCCGACAACCACTTCCCAAAAGGTCACCCATCTTTTGACTACTACAGCATAAGCACGCTTAACTGTGGAGTTTTGTCAAGACCTTTAACCGAAAAGATAAGTGCATTTTCGTGACATAGGTGGTCAAATCAATTCATTTAAACCTCTCCTCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

261

Start:

13748704  

End:

13748964

Strand:

-

>scaffold_1_LTR-Cassandra_51

CCACCTCTCTTAATGCACCTCACGTTCCCTCACTAGGCCATGAGCCGATCCATATACGACGGTCAATTTGCTATATCTAGGAGATTTAAAAGATTTATTTACCGACCCTACAAATAAGCACATGATATTTTCTTATGTTTTGGCCACACTCACACAGTACCAACAACTACATCCCGAAAGGTCACCCATCTTTTGACTACTCCAACATAAGCACACTTAACTGTGGAATTCTTTTAGGACCCTTGAACGGAAATATAAGTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

323

Start:

13799509  

End:

13799831

Strand:

-

>scaffold_1_LTR-Cassandra_52

TGTAACTCCCCGACCGCCATCTCTCCAGTGGGCTCCATGTTCTCCACCATCCCATGGGCCCATCAAAATCCAACGGTCGGTTTGCTACGCCCGAGAGTCTTATATACTTGTTTACCGACCCGACAAATCATCACATGATCTCTCCCTGTGTTTTGGCCTCACTCATACAGTTCCGAAAGCCACTATCCGGAAGGTCAGCCATCCTTTGACTACGGCAGCATAAGCACACTTAACTGTGGAGTTCTCTCAGGACCCTGGACCGAAAAGATAAGTGCACTTTAGTTACATAGGTGGCCAAATTAATTCATTTAAACCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

281

Start:

14098017  

End:

14098297

Strand:

+

>scaffold_1_LTR-Cassandra_53

GCCACCTATGTCACCAATGTACACTTATTTTTCGGTCAAGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATTTGTAGGGTCGGTAAACAAGTCACTAAACCTCTCAAATGTAGCAAACCGACGGTCGGATATTAATGGACTTATAGACATATTGAGAAAACGTGAAATCCATTAAAAGAGGTGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

298

Start:

14286227  

End:

14286524

Strand:

+

>scaffold_1_LTR-Cassandra_54

TGCGGTGAGGTTTAAATGAATTGACTTGGCCATCTCTGTCACCAAAGTACACTTATCTTTTCGGTTAAAGGTTCTGAGAGAATTCCACAGTTAAGTGTGCTTATGCTGGAGTAGTCAAAGGATGTGTGACCTTCCGGGAAGTAGTTGTCGGAACTGTGTGAGTGAGGCCAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCTGTAAACAAGCCGGACGTAGCAAACTGACTGTCGGATATTGATGGGTTTATGGGCCTAGTGAGAGGACGTGAGGCCCATCAAGAGAGGTGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

83

Start:

14286499  

End:

14286581

Strand:

+

>scaffold_1_LTR-Cassandra_55

GACGTGAGGCCCATCAAGAGAGGTGGGCCCATAGGCTGGTGGTGAACATGGGGGCCACTAGAGATGGTGGTCGGGGCGTTACA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

308

Start:

14472057  

End:

14472364

Strand:

+

>scaffold_1_LTR-Cassandra_56

TGCGGAGAGGTTTAAAAGAATTAATTTTGCCACCTATGTCACCATAGTGCACTTATCTTTTTGGTCAAAGGTCCTGAGAGAACTCCACAATTAAGTGTGGTTATGCTGGAGTAGTAAAATGATTGGTGACCTTCCGGGAAGTGGTTGTCGGAACTGTGTGAGGGAAGCCAAAACACAAGAAAAGATCATTTGGTTATTTGTAGGGTCGGTAAACAAGCCTTTAACCCTCTTGGACGTAGCAAACCGGCCGTCGAATATTATTGGGCTCATGGGCCTGTGAGAGGAGGTGAGGTCTATTAAGAGAAGTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

132

Start:

14474869  

End:

14475000

Strand:

-

>scaffold_1_LTR-Cassandra_57

AGGTCACCCATCCTTTGACTACTCCAGCATAAGCACGCTTAACTGTAGAGTTGTCTCAGGACCTTTGAACGAAAAGATAAGTGTACTTTGGTGATATAGGTGGCCAAATCAATTCATTTAAACCTCTGCGCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

305

Start:

14627104  

End:

14627408

Strand:

+

>scaffold_1_LTR-Cassandra_58

TGCGTAGAGGTTTAAATGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTAATCTTTTCGGTCAAGGATCCTGAGAGAACTCCACAGTTAAGCGTGCTTATGCTGGTCAAAAGATGGGTGATCTTCCGGGAAGAGGTTGTCGGAACTGTGTGAGTGAGGCCAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTTTTGAAGCCTCTCGGACGTAGCTAACCGGCCGTCGGATATTAATAAGCTGATGGGCCTAGTGAGAGGACGTGAGGCCCATTAACAAAGGTGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

308

Start:

14695062  

End:

14695369

Strand:

-

>scaffold_1_LTR-Cassandra_59

CACCTCTCTTAATAGGCTTTACGTCCTCTCACTAGGCCCATGAGCCCATTGATATCCGACAATCGGTTTGTTACGTCCGGGAGGTTTAAATACTTGTTTGTCGACCATACAAATCATCACATGATCTTTTCCTGTGTTTTGGCCTCACTCACTCAGTTCCGACAACCACTTCCGGAAGGTCACCTATTCTCTGACTACTACAGCATAAGCACGCTTAAATCTTGAGTTCTCTTACAACCTTTGACCGACAAGATAAACGCACTTTGGTGACATATATGACCAAATCAATTCATTTAAACCTCTACGCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

165

Start:

14725994  

End:

14726158

Strand:

+

>scaffold_1_LTR-Cassandra_60

TGTGACACGTAGGTTTCATGATATATAGTGGTATATGCGGAGAGATTTAATAGAATTGATTGGCCAATTGTCACCAAATTACACTTATATTTTTGGTTATGAGTCATAAGAAAACTCCACAATTAAGCGTGTTAATCATGGAGTAGCTAGGATGAAAAACTTTTC