ID Class Order Superfamily Length Start End Strand View
scaffold_8_LTR-Cassandra_641 RetrotransposonsLTRLTR-Cassandra10850593635059470+
scaffold_8_LTR-Cassandra_642 RetrotransposonsLTRLTR-Cassandra31050594875059796+
scaffold_8_LTR-Cassandra_643 RetrotransposonsLTRLTR-Cassandra26751449165145182+
scaffold_8_LTR-Cassandra_644 RetrotransposonsLTRLTR-Cassandra27451910365191309-
scaffold_8_LTR-Cassandra_645 RetrotransposonsLTRLTR-Cassandra11151913595191469-
scaffold_8_LTR-Cassandra_646 RetrotransposonsLTRLTR-Cassandra30051915405191839-
scaffold_8_LTR-Cassandra_647 RetrotransposonsLTRLTR-Cassandra30556658625666166+
scaffold_8_LTR-Cassandra_648 RetrotransposonsLTRLTR-Cassandra14370872627087404+
scaffold_8_LTR-Cassandra_649 RetrotransposonsLTRLTR-Cassandra22571717987172022-
scaffold_8_LTR-Cassandra_650 RetrotransposonsLTRLTR-Cassandra30074096877409986+
scaffold_8_LTR-Cassandra_651 RetrotransposonsLTRLTR-Cassandra30874127377413044+
scaffold_9_LTR-Cassandra_652 RetrotransposonsLTRLTR-Cassandra209227576227784-
scaffold_9_LTR-Cassandra_653 RetrotransposonsLTRLTR-Cassandra108227800227907-
scaffold_9_LTR-Cassandra_654 RetrotransposonsLTRLTR-Cassandra309227969228277-
scaffold_9_LTR-Cassandra_655 RetrotransposonsLTRLTR-Cassandra318266110266427-
scaffold_9_LTR-Cassandra_656 RetrotransposonsLTRLTR-Cassandra311279985280295-

< 29 30 31 32 33 > Total 33


Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_641

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

108

Start:

5059363  

End:

5059470

Strand:

+

>scaffold_8_LTR-Cassandra_641

AGTGGTATCATAGCCAAATTCAAATGCGTGTGGAGTAACTATGGGCTCACACCGTCGGGGGTGACAGTCTTGGTGTGTTACGAAGACGTTGCGGTCTGTTAGAGGGGG

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_642

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

310

Start:

5059487  

End:

5059796

Strand:

+

>scaffold_8_LTR-Cassandra_642

TGCGAAGAGGCTTGATTAAATTGATTTAGCCACATATATCATCAAAGTGCACTTATATTTTTGGTCAAAGATAGAGAGAGAACTCCATATATAAGCGTGCTTATGCTGGGGTTGTCTAGGGATGGATGACTTTCCGGGAAGTGGTTGTCAGAACTATTTGAGTGAGGTCAAAATACAGGGAAAGAGCATGGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGTCTCCCGAGTGTAGCAAACCGGCCATAGGAGATGGGTGGGTTCACGGTCCTAGTGAGAGGATTTGAGGACCATTAAAAGATGTGG

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_643

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

267

Start:

5144916  

End:

5145182

Strand:

+

>scaffold_8_LTR-Cassandra_643

TGTGTAGAGGTTTAAATGAATTGATTTGGCCACATATGTCTACTCCAGAATTCCACAGTTAAGCGTGCTTATGCTGGAGTGGTCAAATGATAGGTGACCTTTCAGAAAATGGTTGTCGGAACTGTGTGAGTGGGGATAAGACACATGGAAAGATCGTGTGGTAATTTGTAGGGTCGGTAAACAAGTGTTTAAGCTTCCCGGACATAGCAAACCAGCTGTATGATATAGATGGGTTCATGGACCTAGTGAGAGGACATAAGACCTATT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_644

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

274

Start:

5191036  

End:

5191309

Strand:

-

>scaffold_8_LTR-Cassandra_644

TGGGCCACACGTCCTCTCACTGGGCCAGTGAGCCCATCAATATCCGACGGTCAGTTTGATACGTCATTTACCGATCCTACAAATCACCACATGATTTTTCCCTGTGTTTTGGCCTCATTCACACGGTTCCGACAACCACTTCCCGGAAGGTCACCTATCCTTTGACTACTCCAGCATAAGCACGCTTAACTGTGACGTTCTCTCATGACCCTTGAGCGAAAATATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCATTTAAACCTCT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_645

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

5191359  

End:

5191469

Strand:

-

>scaffold_8_LTR-Cassandra_645

ATTCTCCTCCACTAACAAACCGCAACGTCCTCCTTGTGCACGACGATCGTCACCCCCTGACAGTGTGAGCCCACCAATCCAAACTTGTCTATGTTCGGCTCTGATACCACT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_646

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

300

Start:

5191540  

End:

5191839

Strand:

-

>scaffold_8_LTR-Cassandra_646

AATGGACCTCACGTCCTCTCATTAGGCCCGTGAGCCCATCAATATATGACGGTCGATTTGCTACGTACATGAGGCTTAAATACTTGTTTACTGACCCTACAAATCACCACATGATATTTCCATGTGTTTTAGCCTCACTCATACAGTTCCAACAACCACTTCCCGGAAGGTCACTCATCCTTTGACTACTCCAGCATAAGCAAGCTTAATTGTGGCATTCTCTCAGGACCTTTTACTGAAAAGATAAGTGCACTTAAGTGACATAGGTGATCAGATCAATTTTTTTAAACCTCTCGGCAT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_647

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

305

Start:

5665862  

End:

5666166

Strand:

+

>scaffold_8_LTR-Cassandra_647

TGCGGAGAGGTTTTAATGAATTGATTTGGCCACTTATGTCACCAAAATGCACTTATCTTTTCTATCAAAGGTTCTAAGTGAACTCCACATTTTAGCGTGTTTATGTTGGAGTAGTCAAAGGATGGGTAACCTTCCGGAAAGAGGTTGTCGGAACTTTGTGAGTGAGGCCAAAACACAAGAAAATCATGTGGTGATTTGTAGGGTTGGTAAACAAGTATTTAAGTCTTCCGGACGTAACAAACCGGCCGTCGGATACTGATGGGCTCATGGGCCTAGTGAGAGTACGTGAGACCCATCAAGAGAGG

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_648

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

143

Start:

7087262  

End:

7087404

Strand:

+

>scaffold_8_LTR-Cassandra_648

TGCAAAAAGGTTTAAATGAATTGATTTGGTCACATATGTCACCAAAGTACACTATCTTTTTGGTCAAAGGTTCCGAGAAAACTTCACAGTAAACATGCTTATGTTGGAGTAGTATCAGAATAGGTGACTCTGCAGGAAGTGGT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_649

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

225

Start:

7171798  

End:

7172022

Strand:

-

>scaffold_8_LTR-Cassandra_649

TAGTAAGCTTTAAAAACCAGTTTACCGATCCTATAAATCATCAAGTGATCTTTCCATGTGTTTTTTTTCTCACACGCACAGTTCTGGCAATTATTTCTAAGAATGTCACCCATCTTGAAACTACTCCAACATAAATATGTTTAACTGTGGATATCTCTCAAGATGTTTAATGATATTTGATCAAAAAGATAAGTGCACTTTATGACATATGTGACCAAATCAATT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_650

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

300

Start:

7409687  

End:

7409986

Strand:

+

>scaffold_8_LTR-Cassandra_650

TGTGCAGAGGTTTAAATGAATTGATTTGACCACATATGTCACCAAAGTGCATTTATTTTTTCGATCAAAGGTCCCAAAAGAACTCTATAGTTAAGGGTGTTTATGCTGGAGTAGTAAAAAAAATGGGTAACCTTCCGGGAAGTGGTTGTCGAAACTATGTGAATGAGAAAATATCAAGTGGTGATTTGTAGGATCGGTAAATAAATATTTTTAAACCTATCAGACGTAACAAACTGGCCGTCAGATATGCATGTGCTCATGGGCCTAGTGAAATGATATGAGGCTCATTAAGAGAGGTGG

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Cassandra_651

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

308

Start:

7412737  

End:

7413044

Strand:

+

>scaffold_8_LTR-Cassandra_651

TGCACAAAGGTTTAGGTGAATTGATTTGGTCATTTATGTTATCAAAGTATATTATCTTTTCGGTTAAGTATCCTGAGAGAACTTCACGATTCTCACGATTAAGCGTATTTAAACTGTAGTAGTCTCAGGATAGATGACTTTCGGAGAAATTATTGTCGGAACTGTGTGAGTGAAGACAAAGCACAAGGAAAGAGCATGTGATGATTTTTAGGATCGTTAAATAAGTTTTTAAAGTCTCTCAGATATAAAAAGCTGGTCGTCATATATGAATGGGCACATGAACCTAGTGAGAGGACGCAAAGCTCATT

Capsella rubella (v1.1)

ID:

scaffold_9_LTR-Cassandra_652

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

209

Start:

227576  

End:

227784

Strand:

-

>scaffold_9_LTR-Cassandra_652

ACTGATCCTACAAATCACCACATGATATTTTCCTGTGTTTTGGCCTCATTCACACAGTTCCGACAATCACTTTCCATAAGGTCACCCATCCTTTGACTACTCCAGCATAAGCACGTTTAACTGTGGAGTTCTCTGAGGACCTTTGACCGAAAACATAAGTGCACTTTTCTGACATAAGTGCCAAATCAATTCATTTAATCCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_9_LTR-Cassandra_653

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

108

Start:

227800  

End:

227907

Strand:

-

>scaffold_9_LTR-Cassandra_653

ATTCTCCCCCACTAACATACCGCAACGTCCTCGTTGCGCACAATGATCGTCACCCCTCACAGTGTGAGCCCACCACTCCACACTTGTCTAGGTTCGGCTTTGATACCA

Capsella rubella (v1.1)

ID:

scaffold_9_LTR-Cassandra_654

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

309

Start:

227969  

End:

228277

Strand:

-

>scaffold_9_LTR-Cassandra_654

CCACCTCTTTAATGGGTCTCACGTCCTCTCACTAGCCCCGTGAGCCCATCAATATCCGACGATCGGTTTGCTACGTCCGGGAGGCTTAAAGACTTGTTTACCGATCCTACAAATCATCACATGATCTTTCCCTGTGTTTTGGCCTCACTCACACAATTCTGACAACCACTTCCCCGAAGGTCACCCATCCTTTGATTACTCTTGCATAAGCAAGCTTAACTTTGGAGTTCTCTCAAGACCTTTGATAGAAAAGATAAGTGCACTTTGGTGACATATTTGGCCAAATCAATTCATTTAATCTTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_9_LTR-Cassandra_655

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

266110  

End:

266427

Strand:

-

>scaffold_9_LTR-Cassandra_655

GCCCCAAGCCCGCCTCTCTTAATGGGTCACATGTCCTCTCATTAGGCCCATGAGCACATTAATAGCCAAAGGTCGGTTTGCTACATCCGGGAGGCTTAAATAGTTGTTTACCAACCCTATAAATCACCACATGGTCTTTCCCTGTGTTTTGGCCTCACTCACACAGTTCAGACTATCACTTCTCGGAAGGTTACCTATCTTTTGACTACTCTAGCATAAGCACTCTTAACTGTGGAGTTCTCTCAGGACCTTTGACCGATAAGATAAGTGCACTTTGATGACATGGGTAACCAAATCATTCATTTAAACCTCTCCCCA

Capsella rubella (v1.1)

ID:

scaffold_9_LTR-Cassandra_656

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

311

Start:

279985  

End:

280295

Strand:

-

>scaffold_9_LTR-Cassandra_656

CCACCTTTCTTAATGGGCCTCACGTCGTCTCACTAGGCCCATGAGCCCATTAATACCCGACGGCCGGTTATCTACGTCCGGGAGGCTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGGCCTCACTCACACAGTTCCGACAACCACTTCCCGGAAGTTCACCCATCCTTTGACTACTCCAGCATAAGCATGCTTAACTGTGGAGTTCTCTTAGGACCATTGACCAAAAAGATAAGTGCACTTTTGGTTACATAGGTGGCCAAATCAATTCATTTAAACCTCTCCGCA