ID Class Order Superfamily Length Start End Strand View
scaffold_14_LTR-Cassandra_81 RetrotransposonsLTRLTR-Cassandra11199999100109-
scaffold_14_LTR-Cassandra_82 RetrotransposonsLTRLTR-Cassandra284100168100451-
scaffold_145_LTR-Cassandra_83 RetrotransposonsLTRLTR-Cassandra9825302627+
scaffold_163_LTR-Cassandra_84 RetrotransposonsLTRLTR-Cassandra30860946401-
scaffold_193_LTR-Cassandra_85 RetrotransposonsLTRLTR-Cassandra12289479068+
scaffold_193_LTR-Cassandra_86 RetrotransposonsLTRLTR-Cassandra1551127911433+
scaffold_2_LTR-Cassandra_87 RetrotransposonsLTRLTR-Cassandra30923728652373173-
scaffold_2_LTR-Cassandra_88 RetrotransposonsLTRLTR-Cassandra11023731882373297-
scaffold_2_LTR-Cassandra_89 RetrotransposonsLTRLTR-Cassandra31023733582373667-
scaffold_2_LTR-Cassandra_90 RetrotransposonsLTRLTR-Cassandra14426378542637997-
scaffold_2_LTR-Cassandra_91 RetrotransposonsLTRLTR-Cassandra31827799162780233+
scaffold_2_LTR-Cassandra_92 RetrotransposonsLTRLTR-Cassandra13529706262970760+
scaffold_2_LTR-Cassandra_93 RetrotransposonsLTRLTR-Cassandra29536688013669095+
scaffold_2_LTR-Cassandra_94 RetrotransposonsLTRLTR-Cassandra29936805503680848+
scaffold_2_LTR-Cassandra_95 RetrotransposonsLTRLTR-Cassandra10136884573688557-
scaffold_2_LTR-Cassandra_96 RetrotransposonsLTRLTR-Cassandra31136967903697100+
scaffold_2_LTR-Cassandra_97 RetrotransposonsLTRLTR-Cassandra9037088193708908-
scaffold_2_LTR-Cassandra_98 RetrotransposonsLTRLTR-Cassandra27337089283709200+
scaffold_2_LTR-Cassandra_99 RetrotransposonsLTRLTR-Cassandra29438185033818796-
scaffold_2_LTR-Cassandra_100 RetrotransposonsLTRLTR-Cassandra29838718253872122-

< 5 6 7 8 9 > Total 33


Capsella rubella (v1.1)

ID:

scaffold_14_LTR-Cassandra_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

99999  

End:

100109

Strand:

-

>scaffold_14_LTR-Cassandra_81

ATTCTCCACCACTAACTGACCGCAACGTCCTCGTTGCGTGCAACGATCGTCACCCCTTGACAGTGTGAGCCCACCACTCCACACTTCTCTGCGTTCAGCTCTGATACCACT

Capsella rubella (v1.1)

ID:

scaffold_14_LTR-Cassandra_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

284

Start:

100168  

End:

100451

Strand:

-

>scaffold_14_LTR-Cassandra_82

CCACCTCTCTTAGTGGGCCTCTCGTCCTCTCACTAGGCAGTGAGCCCATCAATATTCGACGGTCAATTTGCTACGTCTGGGAGGCTTAAAGTCTTGTTTACCGACCCTACAAATCACCACATGATCTTTCTCTGTGTTTTGGCCTCACGCACACAGTTCCGACAACCACTTCCCGGAAGGTCACCCATACTTAACTGTGGAGTTCTTTGAGGACCCTTGACCGAAAAGATAAGTGCATTTTGGTGACATAGGTGGCCAAATAAATTCATTTAAACCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_145_LTR-Cassandra_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

2530  

End:

2627

Strand:

+

>scaffold_145_LTR-Cassandra_83

TGCGGAAAGGTTTAAATGAATTGATTTGGCCACCTATATCACCAAAGTGCACTTATCTTTTTGGTCAAGTGTCCTGAGTGAACTCCACAGTTAAGCAT

Capsella rubella (v1.1)

ID:

scaffold_163_LTR-Cassandra_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

308

Start:

6094  

End:

6401

Strand:

-

>scaffold_163_LTR-Cassandra_84

CCCTCTTAATGGGCCTAGGGTCCGCTCACTAGGCGCATGAGCCCATCAATATCCGACGGTCGGTTAGCTACGTCCGAGAGGCTTAAAGACTTCTTTACAGATCCTACAAATCGCCACATGATCTTTCCCTATGTTTTGGCCTCACTCACACAGTTCGAACAATTTCTTTCTAGAAGGTCACCTATCCTTTGACTACTCCAGCATAGCCACGTTCAATTGTTGAGTTTTCTCAAAAGCTCTTAACCGAAAATATAAGTGCACTTTTTATGACATAAGTGACCAAATCGATTCATTTAAGCATCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_193_LTR-Cassandra_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

122

Start:

8947  

End:

9068

Strand:

+

>scaffold_193_LTR-Cassandra_85

ATGTGGTAATTTTTAGGATCAGTAACCAATTATTTAAGCCTCCTTTGTGTAGCAAACCGACGGTCAGATAGGATGAGCTAAAGGGCCTAGTGAGAGGACGTAATACCCACTAAGAGAGGTGG

Capsella rubella (v1.1)

ID:

scaffold_193_LTR-Cassandra_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

155

Start:

11279  

End:

11433

Strand:

+

>scaffold_193_LTR-Cassandra_86

ATATCACCAAAGTGTACTTATCTTTTCGGTCAATGGTTCCTGAGAGAAGTCCACAGTTAAGCGTGATTATGTTGGAGTAGTCAAAAGATGGGTGACCTTCTAGAAGTGGTTGTTTGAACTGTGTGAGTGAGGCCAAAACACAGGAAAAGATTATG

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

309

Start:

2372865  

End:

2373173

Strand:

-

>scaffold_2_LTR-Cassandra_87

CACCTCTCTTAATGGGCCTCACGTCCTTTCACTAAGCCCATGAGCCCATTAATATCCGACGACCGGTTTGCTACGTCCGGGAGGCTTAAATACTTGTTTACCGACCCTATAAATCATCACATGATCTTTTCCTGTGTTTTGGCCTCACTCACACAGTTCCGACAACCACTTCCCGGAAGGTCACCCATCCTTTAACTACTCCAGCATAAGCACACTTAACTGTAGAGTTCTCTCAGGACCCTTGACCGAAAAGATAAGTGCACTTTGGTAACATATGTGGCCAAATCAATTCATTTAAACCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

2373188  

End:

2373297

Strand:

-

>scaffold_2_LTR-Cassandra_88

ATTCTCCCCACTAATATACCACAACGTCCTCGTTGCACACAATGATCGTCACCCCCTGACAGTGTGAGCCCACCACTCCACACTTGTCTGGGTTCGGCTCTGATACCACT

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

310

Start:

2373358  

End:

2373667

Strand:

-

>scaffold_2_LTR-Cassandra_89

CACCTCTCTTAATGGGCATCACGTCCTCTCACTAGGTCCATTGGCCCATTAATATCCGACGGCTGGTTTGCTAAGTCAGGAAGGCTTAAATACTTGTTTACCGACCCTAAAAAGCACCACATGATCTTTCCATGTGTTTTGGCTTCACTCACACAGTTCCTACAAACCACTTCCCAGAACTTCACCCATCTTTTGACTACTCCAGCATAAGCACGCTTAACACTGGAGTTCTCTCAGAAACCTTCACCGAAAAGATAAGTGCACTTTGATGACATAGGTGGCCAAATAAATTCATTTAAACCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

144

Start:

2637854  

End:

2637997

Strand:

-

>scaffold_2_LTR-Cassandra_90

TCACCCATCATGAAACCAGCTCAAACATGTTAAATTGTGGAGTTCTCTTAGGAGGTTTGACCAAAAATAAGTGCAATTTAGTAAAGTAGGTGACTAAATCAATCCTTTTAAACATCTGTATCACCATGAAACTGGAATATTACA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

2779916  

End:

2780233

Strand:

+

>scaffold_2_LTR-Cassandra_91

TGTGGCACCCTGATTTCAGAAAATGCGGAAAGGTTTAAAGTATTTAATTTGACGATCTTTAACACCAAAGTGCATTTATCTTTTAGTTCAAATATTCTAAGAGTACTCTACAATTAAACGTATTTATACTGGAGTAGTATTAGGATGTGTGACATTCCGAAAAGTGATTGATGGGACTGTGTAAATGAGGACAATACTCATGGAATATCATGTAATGATTTGTAGTATAGATTAACAAGTATTTAAAGCTTCTCAAACATAACAAAACGGCCGTTAGATATGATGGGTCCATGAGCCTAGTGAAAAGACGTGAAACCC

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

135

Start:

2970626  

End:

2970760

Strand:

+

>scaffold_2_LTR-Cassandra_92

TAACACCCTAGTTTCAGGAAGTACGGTAGTGCATGCGGAGAGGTTTGAGAAGATTGATTTGGCCACCTATGTCACCAAAGTTCACTTATCATTTCGGTCAAAAGTCTTTAAAAAAATTCACAGTTAAGCATGCTT

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

295

Start:

3668801  

End:

3669095

Strand:

+

>scaffold_2_LTR-Cassandra_93

TGCGAAGAGGTTTAAATAAATTAATTTAGCCATTTATGTCATTCAAGTACACATATTTTTCCAGTCAAAGATTTTGAGATAACTCCACAGTTAAGGGTGTTTATGTTGGAGTAGTCAAAATATGGGTGACTTTCCGGGAAATAGTTGTCGAGACTGTGTGAGTAAGACCAAAATACACGAAAATATCATGTGGTGAAGTGTAAAGTTGGTAAACAAGTCTTTAAACCTCCCGGATGTAACAAACCAATCGTCGGATATAGATGAGCTCACGGGCCTGGTGAAAAAACGTGAGGCC

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

299

Start:

3680550  

End:

3680848

Strand:

+

>scaffold_2_LTR-Cassandra_94

TGTCGAGAGGTTTAAATTAATTGATTTGGCCACTTATCTCACCAAAGTGCACTTATCTTTTTGGTCAAATATCATAGGAGAACTCCACAGTTAAGCATGCTTATGCTGGAGTAGTCCAAAGATGGGTTACCTTCTGGGAAATGATTGTCGGAACTGTGTGAGTGCGGTCAAAACACAGGAAAATATCATATGGTGATTTATAGGATCGGTTAACATGTTTTTAAGTCTCCCGGACATAGCAAACTGACAGTCAGATAAGGATGAACTTACTGGCTTAGTGAGAGAACGTGGAACCCATT

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

101

Start:

3688457  

End:

3688557

Strand:

-

>scaffold_2_LTR-Cassandra_95

AGCACGTTTAACTGTGAAGTTCTATCAGAACCGTTAACCGAAAAGATAAGTACACTTTGGTGACACAAGTGGCCAAATCAATTCATTTAAACCTCTCCGCA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

311

Start:

3696790  

End:

3697100

Strand:

+

>scaffold_2_LTR-Cassandra_96

TGTGAATAGGTTTAAATTAATTGATTTGGCCACATATGATACCAAAGTGCACTTTTCTTTTCGGTAAAAAAGGTCATGAGATAACTCCACAGTTAAGCGTGTTTTTGCTGGAGTAGTCAACGGATGGGTGACCTTCCGGGAAGTGGTTGTCGAAACTATGTGAGTGAGGCCAAAACTCGGGGAAAGATAATGTGGTGATTTGTAGGGTCGGTAAACAAATATTTAAGCCTCCCAGACGTAGCAAACCGACAGTCGAATATTAATGGGTTCATGAGCGTAGTGAGAGAACGTGAGACCCATTAAAAGAGGTG

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

90

Start:

3708819  

End:

3708908

Strand:

-

>scaffold_2_LTR-Cassandra_97

TGAGTGCATTTTTGTGATATACATTACCAAATCAATTTCTTTAAACTTTTTCGCATGCACAATCATTTATTTTGAAACCAGGGTGTCATA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

273

Start:

3708928  

End:

3709200

Strand:

+

>scaffold_2_LTR-Cassandra_98

AATATGGTGGTGCATGCTCAGAAGTTTTAAGAGAATTGATTTGGCCACGTAAATAACCTAAGTACACTTCGCTTTTCAATGAACCATCCCGAGAGAATTTCATAGTTATGTGTGTACTTGAGCTGGAGTGATTGTCGGAACCATGCGAGTAAGAACAAAACACAATAAACAAGTCTTGAAAGCCTTCCAGACGTAAGAAACCGACCATCGGTTATAGATAAACGGTTGAGAGGAAGTGGGGACCATTAAAAACAGTGACGGTCGGAGGTTACA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

294

Start:

3818503  

End:

3818796

Strand:

-

>scaffold_2_LTR-Cassandra_99

GGCCCCTGAGCCCATCAATATCCGATGGTCGGTTTGCTACGTCTTGCAGGCTTAAATACTTGTTTACCGACCCTATAAATCACCACATGATCTTTCTCTGTGTGTTGGCCTCACTCACACAGTTCCGACAACCACTTCCCGGAAGGTCACCCATTTCCCGGAAGGTCACCCATCCTTTGACTACTCTAGCATAAGCACACTTAATTGTGGAGTTCTCTCATGACCTCTGACCGAAAAGATAAGTGTACTTTGGCGACATAGGTGGCCAAATCAATTCATTTAAACCTCTCTGCA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Cassandra_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

298

Start:

3871825  

End:

3872122

Strand:

-

>scaffold_2_LTR-Cassandra_100

TGGGTTCACCCTTGTCCGACGGTCGGTTCGCTATGTACAGAAGGTTTTAAATACTTGCTTACTGACCTTACAAATCACCACTTGATATTTTCCATGTTTTATCCTCACTCATATGGTTCTGATGATCTCTTCAAAGAAGGTCTCATATCCTGAAACAACTCCAGCAAAAGCACGCTTAACTATGGAATTCGTTTTGGACATTTAAACAAAAGGTGCACTTTGGTTAGATAGGTGGCTAGATCAATTCTTTTAAACATCCTCATACGCACAACCCTATATCATAAATCGGGGGTTTACA