ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Cassandra_21 RetrotransposonsLTRLTR-Cassandra1111239322412393334-
scaffold_1_LTR-Cassandra_22 RetrotransposonsLTRLTR-Cassandra981239339412393491-
scaffold_1_LTR-Cassandra_23 RetrotransposonsLTRLTR-Cassandra1571239466912394825-
scaffold_1_LTR-Cassandra_24 RetrotransposonsLTRLTR-Cassandra981239826112398358-
scaffold_1_LTR-Cassandra_25 RetrotransposonsLTRLTR-Cassandra1571239960312399759-
scaffold_1_LTR-Cassandra_26 RetrotransposonsLTRLTR-Cassandra971246715812467254-
scaffold_1_LTR-Cassandra_27 RetrotransposonsLTRLTR-Cassandra2321248093012481161+
scaffold_1_LTR-Cassandra_28 RetrotransposonsLTRLTR-Cassandra931255145212551544+
scaffold_1_LTR-Cassandra_29 RetrotransposonsLTRLTR-Cassandra1391255152612551664-
scaffold_1_LTR-Cassandra_30 RetrotransposonsLTRLTR-Cassandra991258700612587104+
scaffold_1_LTR-Cassandra_31 RetrotransposonsLTRLTR-Cassandra3061261680212617107+
scaffold_1_LTR-Cassandra_32 RetrotransposonsLTRLTR-Cassandra1101261714612617255+
scaffold_1_LTR-Cassandra_33 RetrotransposonsLTRLTR-Cassandra1321261730612617437+
scaffold_1_LTR-Cassandra_34 RetrotransposonsLTRLTR-Cassandra1721264438612644557+
scaffold_1_LTR-Cassandra_35 RetrotransposonsLTRLTR-Cassandra1571265787112658027+
scaffold_1_LTR-Cassandra_36 RetrotransposonsLTRLTR-Cassandra851265860712658691+
scaffold_1_LTR-Cassandra_37 RetrotransposonsLTRLTR-Cassandra1691266847312668641+
scaffold_1_LTR-Cassandra_38 RetrotransposonsLTRLTR-Cassandra981266992712670024+
scaffold_1_LTR-Cassandra_39 RetrotransposonsLTRLTR-Cassandra1691268344512683613+
scaffold_1_LTR-Cassandra_40 RetrotransposonsLTRLTR-Cassandra981268486212684959+

< 2 3 4 5 6 > Total 33


Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

12393224  

End:

12393334

Strand:

-

>scaffold_1_LTR-Cassandra_21

ATTCTCCCCCACTAACAGATCGCAACATCCTCGTTGCGCACAATGATCGTTACCCCCTAACAGTGTGAGCCCACCACTCCACACTTGTTTGGGTTCGGCCCTAATACCACT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

12393394  

End:

12393491

Strand:

-

>scaffold_1_LTR-Cassandra_22

CACCTCTCTTGATGGACCTCACGTCCTCTCACTAGGCCCGTGAGCCCATCCATATCTTACGATCGGTTTGCTACGTCCAGGAGGCTTAAAGACTTGTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

157

Start:

12394669  

End:

12394825

Strand:

-

>scaffold_1_LTR-Cassandra_23

ACTTGTTTACCGATTCTACAAATCACCACATGATCTTTCCTTGTGTTTTGGCCTTACTCACTCAGTTCCGACAACCACTTCCCGAAAGGTCACCCATCCTTGGACTACTCCAGCATAAGCACGTTTAACTGTGAAGTTCTCTTGGGACCTTTGACCG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

12398261  

End:

12398358

Strand:

-

>scaffold_1_LTR-Cassandra_24

CACCTCTCTTGCTGGACCTCACGTCCTCTCACAAGGCCCGTGAGCCCATCCATATCTGACGGTCGGTTTGCTACGTCCGGGAGGCTTAAAGGCTTGTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

157

Start:

12399603  

End:

12399759

Strand:

-

>scaffold_1_LTR-Cassandra_25

ACTTGTTTACCGATTCTACAAATCACCACATGATCTTTCCTTGTGTTTTCGCCTTACTCACTCAGTTCCGACAACCATTTCCCGAAAGGTCACCCAACCTTGGACTACTCCAGCATAAGCACGCTTTACTGTGAAGTTCTCTTGGCACCTTTGACCG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

97

Start:

12467158  

End:

12467254

Strand:

-

>scaffold_1_LTR-Cassandra_26

AACCACACTTACACAGTTTCTCTCAAGACTTTTGACCAAAAAGATAAGTGCAATTTAGTGACATAAATGGCCAAATCAATTCTTTAAATCTCTCTGC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

232

Start:

12480930  

End:

12481161

Strand:

+

>scaffold_1_LTR-Cassandra_27

AGAACACCCCAGTTAATCGTGCTTATGTTGGAGTAGTCAAAGGATGGGTGACCTTCCGGGAAATGGTTGTCAGAACTGTATGAATGAGGACAAAACACAAGGAAAAATCATGTAATAATTTGCAGGGTCGATAAAAAAGTATTCAAACATCCCGGACATAGAAAACGGGCCGTCATATAAGGATGGGCTCATGGGCCTAGTGAGAGGACGTGAGGCCCATTAAGAGAGATGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

93

Start:

12551452  

End:

12551544

Strand:

+

>scaffold_1_LTR-Cassandra_28

TATAACACCCCAATATCAGGAATTTGGTGTTAGAAGCGAGGAGGTTTTCAATTTTTTTTTTGCCATATGTATCACCAAAGTACACTTATCTTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

139

Start:

12551526  

End:

12551664

Strand:

-

>scaffold_1_LTR-Cassandra_29

CCAAAGTACACTTATCTTTCAAAGAATCATCTCGGGATGGTTGATATGAAAAGATAAGTGCACTCTAGTGATATAGATGACCAAAACAGTTTTTTAAACCTCTTTGTATACACCACAATATTTATGATATTGGGGTTTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

99

Start:

12587006  

End:

12587104

Strand:

+

>scaffold_1_LTR-Cassandra_30

TGCGGAGAGGCTTAAATTAATTGATTTAACCTGTCACCAACGTGCACTTATCTTTTCGGTCAAGTGTGTCCTAAGAGAACTTTACAGTTATGAGTGTTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

306

Start:

12616802  

End:

12617107

Strand:

+

>scaffold_1_LTR-Cassandra_31

TGCGGAGAGGTTATGAATTAATTTGGCCACATATGTCACAAAAGTGCACTTATATTTTCGGACAAGAGTCCTGAGAGAACTCCACAATTAAACGTGCTTATGCTCGAATAGTCAAAGGATGAGTGACCTTCTGGGAAGTTGTTTACGGAACTATGTGAGTGAGGCCAAAACACAGAAAAATATCATGTGGTAATTTGTAGGGTCGGTAAACAAGTCTTTAAGCCTCTCGGACGTAGCAAACGGTTGTTGGATATTGATGAGCTTATGGGCCTAGTGAGAGGACCAGAGGCCCATTAAAAGAGGTGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

12617146  

End:

12617255

Strand:

+

>scaffold_1_LTR-Cassandra_32

ATGGTATCAGAGCAGAATCCAAACAAGTGTGGAGTGGTGAGCTCACACTGTCAAGGAGTGATGATCATTGTGCGCAATGAGGACGTTGCCGTCTGTCAGTGGGGGAGAAT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

132

Start:

12617306  

End:

12617437

Strand:

+

>scaffold_1_LTR-Cassandra_33

GGGAAAGATCATGTGGTGATTTGTTGGGTCGGTAAACAACTCATTAAGCCTCCCGGACGTAGGAAACCGGCCGTCGAATATTGATGAGCCCATGGGCCTAGTGAGAGGACGTGAAGCCCATTAAGAGAGGTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

172

Start:

12644386  

End:

12644557

Strand:

+

>scaffold_1_LTR-Cassandra_34

TGTGACACTACAGTTTTAGTAAATGTGGTGGTGCATGCAGAGAGACTTGAAATAATTGATTTGGTCACCTATGTTACCAAAGTACGCTTACATTTTTAGTTAACGACCTGAGAAAACTACACAGTTAACCATGCTTATGCTGGATTAGTTTCAGAATGGGTAACCTTGCGAG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

157

Start:

12657871  

End:

12658027

Strand:

+

>scaffold_1_LTR-Cassandra_35

CGGTCAAAGGTCCCAAGAGAACTTCACAGTTAAGCGTACTTATGCTGGAGTAGTCCAAGGATGGGTGACCTTTCGGGAAGTGGTTGTCGGAACTGAGTGAGTAAGGCCAAAACACAAGGAAAGATCATGTGGTGATTTGTAGAATCGGTAAACAAGT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

85

Start:

12658607  

End:

12658691

Strand:

+

>scaffold_1_LTR-Cassandra_36

GACGTGAGGCCCATCAAGAGAGGTAGGCCCATGGGATGAGAGTGAACATGAGACCCACTGGAGAGTTGATGGTTGGGGCGTTACA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

169

Start:

12668473  

End:

12668641

Strand:

+

>scaffold_1_LTR-Cassandra_37

ACTAATTATTTTGGTCAAAGGTCCCAAGAGAACTTCACAATTAAGCGTGCTTATGTTGGAGTAGTCCAAGGATGGGTGACCTTTCGAGAAGTGGTTGTCGGAACTGAGTGAGTAAAGGCCAAAACACCAGGAAAGATCATGTGGTGATTTGTAGAATCGAGAAACAAGT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

12669927  

End:

12670024

Strand:

+

>scaffold_1_LTR-Cassandra_38

AACAAGTCTTTAAGCCTGCCGGACGTAGGAAACCGACCGTCAGATATGGATGGGCTCACGGGCCTAGTGAGAGAACGTGAGGTCCAGCAAGAGAGGTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

169

Start:

12683445  

End:

12683613

Strand:

+

>scaffold_1_LTR-Cassandra_39

ACTAATCATTTTGGTCAAAGGTCCCAAGAGAACTTCACAATTAAGCGTGCTTATGTTGGAGTAGTCCAAGGATGGGTGACCTTTCGAGAAGTGGTTGTCGGAACTGAGTGAGTAAAGGCCAAAACACCAGGAAAGATCATGTGGTGATTTGTAGAATCGAGAAACAAGT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Cassandra_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

12684862  

End:

12684959

Strand:

+

>scaffold_1_LTR-Cassandra_40

AACAAGTCTTTAAGCCTGCCGGACGTAGGAAACCGACCGTCAGATATGGATGGGCTCACGGGCCTAGTGAGAGAACGTGAGGTCCAGCAAGAGAGGTG