ID Class Order Superfamily Length Start End Strand View
Scaffold15697_LTR_41 RetrotransposonsLTRLTR10814024211402528+
Scaffold15697_LTR_42 RetrotransposonsLTRLTR21720215012021717-
Scaffold15697_LTR_43 RetrotransposonsLTRLTR20520223832022587+
Scaffold15774_LTR_44 RetrotransposonsLTRLTR1690263443265132+
Scaffold15774_LTR_45 RetrotransposonsLTRLTR221480699480919+
Scaffold15774_LTR_46 RetrotransposonsLTRLTR1015480895481909+
Scaffold15774_LTR_47 RetrotransposonsLTRLTR643489331489973+
Scaffold15774_LTR_48 RetrotransposonsLTRLTR409496854497262+
Scaffold15774_LTR_49 RetrotransposonsLTRLTR263672495672757+
Scaffold15774_LTR_50 RetrotransposonsLTRLTR374711987121202458+
Scaffold15774_LTR_51 RetrotransposonsLTRLTR24020272022027441+
Scaffold15860_LTR_52 RetrotransposonsLTRLTR4149219632223780-
Scaffold15860_LTR_53 RetrotransposonsLTRLTR853309573310425+
Scaffold15860_LTR_54 RetrotransposonsLTRLTR2610310469313078+
Scaffold16327_LTR_55 RetrotransposonsLTRLTR15233838039902-
Scaffold1774_LTR_56 RetrotransposonsLTRLTR900226376227275-
Scaffold1774_LTR_57 RetrotransposonsLTRLTR164391396391559-
Scaffold1774_LTR_58 RetrotransposonsLTRLTR1151455458456608-
Scaffold1774_LTR_59 RetrotransposonsLTRLTR1539456605458143-
Scaffold18351_LTR_60 RetrotransposonsLTRLTR3869156073159941-

< 3 4 5 6 7 > Total 13


Boechera stricta (v1.2)

ID:

Scaffold15697_LTR_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

108

Start:

1402421  

End:

1402528

Strand:

+

>Scaffold15697_LTR_41

GATGAAAGAAATCCGGGCTAAGGTACGTCATGAAAGTGGAGTTGAAACCACTTCTGAAAGGGCTAAGGTACGCATTTCTCGGTCCTAATTCAACATATCTACTTTCAT

Boechera stricta (v1.2)

ID:

Scaffold15697_LTR_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

217

Start:

2021501  

End:

2021717

Strand:

-

>Scaffold15697_LTR_42

ATATATTATGCAAAAATCTGAAAGAAAAATTAACAAAATTGTTAATAGAAATTTGTTCCAAAAAGAGTAATATGTGTGGACCTAAAAGTCCACATTTACCAAGACCCATGACCCATAGCCCAGACACAACGGCAGCGGTGTGCGCACGTGTGTTGTTTTGTATAATGACCCTCTCACTCCTACACCATAATATCATCTTCCCAAAACTAGTAAACTA

Boechera stricta (v1.2)

ID:

Scaffold15697_LTR_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

205

Start:

2022383  

End:

2022587

Strand:

+

>Scaffold15697_LTR_43

CAAGGTTCACTAGTTTTGGGAAAATGATATTACGGTGTAGGATTGAGAGGGTCATTATACAAAATAACACTCCTGGCGTGCCTAACTAGACCATAGGTAATGGGTCTTGGTAAATGTGGGCTTTTAGGCCCACAAATATTACTTTTTTGGGACAAATTTCTATTAACAATTTTGATAATTTTTCTTTCAGATTTTTTTGTATAAT

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1690

Start:

263443  

End:

265132

Strand:

+

>Scaffold15774_LTR_44

AAAAAAAATGAACCAGTTGCTGGACTTGGTAGTACGAACGATTGGCATGGCCGACGAGCCAACAAACCACAGCCACCGCACGGGCATCCGACCACCACCTCTAGAAGATGTCAATTTTGAAATCGGGACCGGCATGATTAACATGATCCAAAGAGATAAGTTTCATGAtctatcaacagagaaccctattgatcaTCTGTATCAATTCGACAAGTTGTGCGCATTGGTGAAAATAAAAGGTGTCTTTGAAGATGCATTAAAGCTTCATTTATTCCCATTCTCACTTGGGGGTAAAGCACATCAATGGGAAAAACATCTTCCATTGGAGACCATTATAACGTGGAGTCAATGCCGTAAAGCGTTCCTAACAAAGTTCTTCCCGAACTCTAGGACAACTCGTTGGAGAAACGAGATATCAAACTTCACACAAcaaagcaccgagaactttggAGAGGCTTGGGAGAGATTCGAGGAGTACACCAGACAATGCCCTCATCATGAATTTGGCGATGAGTCCTTGCTGAGCATATTTTACAGAGGAGTGACTCCCGAGTATCGTACGTTACTCGATGTGGGTAGCTGTGGAACTTTCTTGGGACAAGACGCACAATGTAGAAGAGAGTTATTGGAGAATCTAGCCGAGAGTGACGCAAACTATGGAGAAGACTACGATCGAATAGACAAACACGCCGACATCCATGAAGATGAGGAGAAGCTGACCATAGAGGCGCTATACAAAAAATTAGACAAGGTTCTGAAATCGACGAAACATTTCGTCCCTTCAAAACAACATGCGGAACAATACCGTCGACCAGGGGGGTCGAGGACTTTCCAACAAAGACCGTGGAGCAGGAGCATCGATTGTCCACCATCGATGCAACACAGGAAGCAAGCGCTGACCAGCTATATCGAGCATACCACgtcgacgcaacTAAAACCGGACATGAACATCGACCATACATGGTCGATGCTCATTTTAAAAATAGTGAGGCGACGAGTTTCTCGACGGCTAAAACGGGCAAGCTCGAGGAGATAGTTCAGAATGTTCTGGGACAACagacaagcatggttacaaggggtagtgaagacttcaaggaggttaaccaacggtgtcacgagttagaTGAGAAGTTCGAAGACTTGGTTTCTAAGGTCCACAAACTAGAAACCAAGATATTGTAGGTAACACCGACGATCAATGCGATAACCCTGAGGAGTGGCAAGGAGCTCACACCGATTCCACCGAAAAAACCAATCAACAAAAAGAGTGCAGAGGCTAACATCGAGAAAGAAGATCCAATCATCGAGAAGGAAAATCCCATTATACTAGAGAAAGAacctgagattGAAGAAATCATTATGGAGAAACCGGACGAGGATAAGGAGCCCAACTCTTGTACAAGGAAGCCTAAAACTCGAGAGAAGAGCCAAGCGATTCCAAATATCAACCCAAGATTCCTTTTCCGAGAAGAATTAAGGGAAGGATAGCAGAGAGGATGAGGAACACATTTGAGGAGCAAATGAAAGGTGTGATCATCACTATgccgatactaGAAGCTTTGACGATGATTCCCAACGCTAGCAAATTCCTCAAAGATCTCATGACTAAGAAGAAGAAGGAGCTTACCGAGGTGGCATTCCTAACACCCGAGTCTAGTGCGGTTATTCTTgacaaaaagattccgaggaA

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

221

Start:

480699  

End:

480919

Strand:

+

>Scaffold15774_LTR_45

TTGTCTCGATAAAAGGTTTTCAAATGACCAAATGAATCATCTGGAAGGTTTTGTTCTGGAGCACTGTCACGAAAAACAGCATCACCAATACATAGAGACCGATGGTAATCCTGGagaaatcaacgAACACCAACATCGACCAGAGCGTCGACCACACAAGATCGACGCCGATATATCAGGGAATCCTGTCGAGGGGCAACATCGATCAAGAGGGATTGATG

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1015

Start:

480895  

End:

481909

Strand:

+

>Scaffold15774_LTR_46

CAACATCGATCAAGAGGGATTGATGCTTTCTCAGATGGAAACATTAAGCACCACATCGACTAAGAGCTATCGATGGTATTGCTGGGACTATCAAAGAAAGAGAGCATCAAACGGAACATCGATCGTACACTATCGATGCTATGTCTACAGAAACCGTCAAACAAACccatcgatccAGTCCGGTCGATGCTTTTCCTGGGGGCAGCAAAGAGACAAGTTTTCTAACGACAGGGACAAACAAACTTAAAGAGGTGATTCAGAACATTCTAGATGAAGAATCAAGAAAAGGTGCAAAGGTCAGCGAAGAATTCACAAAAATTGAACAAAGATGGCGCGAACTAGATAACAATTTCAACGATTTGGTTTCTAAAGTCCGAgtattagaaacCCGAACTGTTGAGGAAGCACCAACGATCAATGATATAACCTTGAAGAGTGAAAATGAGCTCAGACCGATCCCACCGAGGCAACCAATTAACAAAGAGAGGGATGAGACTATCATCGAGAAAGAAAATCCAATCATTGAGAGGGAGGATCCAATACTCTAGAAAGAAGATCCCATCGTAACCGAGGAGGAACAACAGATTGAAGAAGTTATTAATGGAAAATCAGTCACGGATGGGGAACCTGATACTCGTCTGAGGAGCCAAGCGATACCCGAtccacttaaatATCAACCTAAGATCCCTTTTCCAGGAAGGATCAAAGGGATGATAGCGGAGAGACTGAGGAATGCATTTGAACAACAAATGAAGGGCGTaatcatcactATGCCGATACTAGAAGCTTTGACGATGATTCCCAATGCTAGCAAATTCCTCAAGGATCTCGTAACTAAGAAGAAGGAGCTCACCGAGGTTACGTTCCTAACACATGAGTGCAGCGCGGTTATTCTCGACAAAAAGATTCCAAAGAAATTGGACGATCCGGGCAGCTTCACtctctcttgcagtataggtccaataacatttgggagatctctatgtgatcttggagctagtgtgaaccttgatgc

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

643

Start:

489331  

End:

489973

Strand:

+

>Scaffold15774_LTR_47

AACCTCATGCCTCAGTCCATTGCACAAAAGTTGGGATtcactacattCAAAGAATGTAGGATGTCACTTGTTCTCGCCGGTTGGATTACTCGAAGACATCCCGGTGATGAttggtgactaCCAAATTCCAACCGACTTTGTGGTACTCAAGATGGACCACCAACCCAAAGATTCACTCATCCTAGGGAGACCATTCCTAGCAACCGCAGGGGCCATCATCGATGTTAAAAACCGAAAAATCGACCTTCACCTAAacgacgaagtAATGCAGTTTAGTATCAATGAAAAAACCCAAGAAACGAGACCGCATCTTCTACATAGACGATCTCGACTTTTTGGCTGATGGTGTGATGGACAAAGTTGAGTTCGAAAACGAAGAACTAACTGAAGAATTCCAAACGCTACAAAATTGAGATGTGGCGACATGCTACCTCGTGAGATGGCATACACGAGTCTAATCGAAGGTGACGAAGAGGAAGAAGCCACGGTGGAAGCAAGAGATGGAAAGACTTGCGATGAAGATGATTGGAGCGAACTCAAGGTACCGAAGGTGGAGTTGAAACCACTTCCGAAAGGTCTAAGGTACGCATTTTTCGGTCCTAATTCAACATATCCTGTCATAGTAAGTGATGAGCTTAATGAT

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

409

Start:

496854  

End:

497262

Strand:

+

>Scaffold15774_LTR_48

ATATCAAGAGCATATCCCCATCCTTATGCATGCATATAATTACATTTAGAAGATGAGTCTAAGAATTTTATTGAACCTCAGAGGCGCTTAAACCCAAATTTGCGTGATGCAGGAATTATTAAACTTCTAGATGCAGGAATTATTTATCCTATatccgatagtaATTGGGTATCACCTGTTCATGTAGTTCCTAAAAAAGATGGTATCACTGTGGTAAAAAATGAAAATGACGAATtaattcttacTAGAACTATCACGGGACATAGGATGTGTATTGATTTAAAAAAATTAAATGCTGCCACTAGAAAAGATCATTTTCTTCTTCTGTTTATTGATCAGATGTTAGAACGATTAGGAAATCACTCACTATTGCTTTTTAGATGGGTActcgggattcTTTCAAATCCCG

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

263

Start:

672495  

End:

672757

Strand:

+

>Scaffold15774_LTR_49

CTAGTATATATAGTGAAGACCTCACTACAAGATATACTAGTTTTGGGAAGAGAATACTATGGTGTAGGAGTGAGAGCGCCATTATGCAAACCAACACGTACGCGCCGCCGCCGCCGGCGTGCCATGCCGTGCCGAGCCAGGCCATTAGTCATGGATCTTGAGTCTTGGTGAACGTGGACTTTTAGACCCACAAAGATTAGTTTTTTTGGGACAAATTTCTGTTAACAATTTTGTTAATTTTTTTTAAAGATTTTTTGCATAAT

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

3747

Start:

1198712  

End:

1202458

Strand:

+

>Scaffold15774_LTR_50

AAGGAACCCGAGACTCGTATAAGGAGACAAGTGACACTCGACATGCACaattatcaacCAAAAATTCCTTTTCCCGGGAGGATTAAAAGGAGAATAATGGAGAGAATGAGGAATGCATTTGAACAATAAATGAAATGTGTAATCATCACTATGCCGATACTAGAAGCTTTGACGATGATTCCCAACgctagcaaattcctcaaagatctcgtgactaagaagaagaaggaactcatcgaggtggcattcctaacgcacgagtgcagcgccgtcattctcgacaaaaagattccaaggaagttaGACGATCCGGGTAGTTTCACTCTCTCTTGCACTCTCGGTCAAATAACATTTGGGAGGTCTTTGTGCGATCTTGGAGCTAGTGTGAACCTCATGCCCCTATCAATAACACAAAAGTTGGGACTTACTCGATTTCAGGAGTGTAAGATGTCATTAGTTCTCGTTGATCGTTCAGTAAAAACTTTGGTGGGATTACTTGAAGACATTCCGGTGATGATTGGTGACTACCAAAATCCCGACCGACTTTGTGGTACTCAAGATGGATCACAAGCCCAAAGATCCACTCATTTTTGGGAGACCATTCCTAGCAACCGCgggagccatcATTGATGTCAAAAATGGAAAAATTGACCTTCATCTAAACAACAAAGTTATGCAGTTTGGTATTGACGAAGTGATGAAGAAACCCGAAGAACGAGACCGAATCTTCTACATAGACGATCTTGACTTGTTGACTGATGGTGTGTTGGACGAAGTTGAGCTCGAAAAATAAGAATTAAGTGAAGAAGTCCAAACGTTACAAAATAGAGACGTGGCGGACATGATACCTcgtgagatggCTTACGCGAGTCTAACCGAAGGTGACGAAGAATATGAAGTTGAAATCACATTCAAAAGGGCTAAGGTACGCATATCTCGGTCCTAATTCAAAATATCCTGTCATAGTAAGTGATGAGCTTAATGATGATGAAATTGCTCTTTTACTTAATGAATAGAAAAAATATATAAAAGCAATAGGATATTCTCTAGATGATATCAAGGGCATATCCCTATCCTTATGCATGCATAGAATACATTTagaagatgaaTCTAAGAATTCAATTGAACCTCAAAGGTGATTAAATCCAAATTTACGTGATGTCGTAAGAAAAGAAATTCTGAAACTTCTAGATGTAGGTATTATTTATCCTATATCAGATAGTACTTGGGTCTCACCTGTTCATGttgtacctaaaaagagtggtatcactgtggtaaaaaatGAAAATGACGAATTAATTCCTACTAGAACTATCACGGAACATAGGATGTGTATTGATTTTAGAAAATTAAATGTTGCCACTAGAAAAAATCATTTTCCTCTCCCATTTATTGATCAGATGTTAGAACGATTAGCAAATCACtctcactattgTTTTTTAGATGGGTATTCAGGATTCTTTCAAATCTCGATACATCCGCAAGATCAAGAAAAAACGACATTTACATGTCTTTATGGTACCTTTGCTTATCGAAGAATGTCGTTTGGACTATGTAATGCACCTGGAACCTTGCAAAGGTGTATGATGTCGATATTTTTAGATCTAATTGAATCAGTTGTTGAGGTGTTTATGGATGATTTCTCTGTGTATGGTTCTTCGTTTGGTGGttgtttgtctaatttgtgcaaggtacttgaacgatgcgaaaagacaaacctcgtacttaattgggagaagtgtcatttcatggtgagagaaggaatcgttctcggacataagatatcagaaagagggattgaagtcgacaaggccaagatcgatgtgatgacaagtttagggcctccaaaaatggtGAAAGACATACGAAGTTTCCTTGGTCATGCTAATTTTTATCGAAGATTCAACAAAGATTTTTCTAAGATAACAAGACCACTCACCAGCCTGCTATGCAAGGATGTCGAGTTCAGCTTCGATGATGGATGTTTCGAGGCATTGTGATCAATCAAAAAGGAGCTAGTGAATGTACCGATAGTATAGCCGCCAGATTAGGAATTGCCGTTTGAGATTATGTGTGATGCTAGTGATTATGCGGTAGAAGCTGTGCTAGGACAACGCAAGGATAAGAGGCTGAATGTCATCTATTACGCCAGTAGAACACTAGAAGAAGCACAAATGAATTACGCTACTACGGAGAAAGAGCTTCTAGCGATCGTCTTTGCttttgagaagttccgtcaatacctagtcggctcaaaagtcatagttcACACGGACCATGCGGCATTAAGGTATCTACTTGCAAAGAAAGATGTGAAGCCGAGGCTACTCCGATGGATACTACTTCTTCAAGAGTTTGATTTGGAGATAAAAGACAAGAGAAGAATAGAAAACGGAGTGGCTGATCATCTTTCTCGGATGAGTATCGAGGACGAGATACCTATTGACGATTCACTACCAGAAGAGCAAGTCTGCGCTATTAGAGTACTTATTGGCGAGCACTACCTCAACAAGGAACTGAAGAGCatcaacgccatcaagGATAAATCACCATGGTACGCTGACATCGTCAACTATCTCGCTTGTGGAGATAAACCGCCTGATATCGTCGGATATCATAAGAAGAAgtttttcaaaGAGATCAACCGATACTATTGGGATGACCCAAACCTCTACACATTATGTAAggataaaatctATAGAAGGTGCGTTCCCGAAAATGATGTACATATGGATCTATGTATGGAGGACATTTCGCTACATTCAAAACGGTAGTTAAAGTTTTACAAGCTGGATTTTGGTGGCCAACTTTATTTCGAGATGCTCATCGATTCAACCAAGCTTGTGATGCATGTTAAAGAAGAAGAAACATAAGTCAAAGGAATGAGATGCCTCAAAACCCGATAATGGAGGTAGAAGTCTTTGACGTGTGGGGcatcgatttcatgggacttttcccgaactctcatggtaACAACTACATCTTAGTGGCGGTTGATTATGTATCTAAATGGGTAGAAGTTATGGCATGTCCAATAAACGATGTGAAGGTAGTTCTGAAACTTTTTAAGAGCATCTTTTTCCCGCGTTTTGGAGTTCCGCGAGTGGTGATTAGCGACGGAGGAACacacttcattaACAAAACTTTCGACAAACTCTTAAGGAAGCATGGCGTTAGACACAAGGTGGCAACAGCATATCATCCTCAAACAAGTGGACAAGTGGAGGTTTTAAACCGGGAAATCAAAGCAATCTTAGAGAAGACGGTAAATATTTCATGAAAAGACTGGTCACTTAAGCTAGACGATGCTTTGTGGGcttatcgtacaGCTTTCAAGACTCCCATTGGTACAAATCCTTTCAACCTTCTCTATGGAAAGTCTTGTCATTTGTCGGTTGAGCTAGAATACAAAGCTATGTGGGctgtcaagatGCTGAACTACGACATAAAAACCGCTGCGGAGAAGCGTCTAAGGCAACTGAACGAGCTAGATGAGATTCGTCGAGACACTTATGAGAATGCCCGGATATACAAGGAGAAGACTAAGGCATTCCATGACaagagaatacttcgaagagagttccgggaaaacgatcaagttctactattcaactctcgtttgaagctctttccgGGAAAGCTCCGATCTCGTTGGTCCGGACCCTTCAAGATAAAGTCTGTAACACCTTACGGGGGTATAGAGTTATGGGGCAACAGTGGAGAGAGCTTCAAGGtgaacggacaaCG

Boechera stricta (v1.2)

ID:

Scaffold15774_LTR_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

240

Start:

2027202  

End:

2027441

Strand:

+

>Scaffold15774_LTR_51

CTAGTATATATAGTGAAGAATTCACTACAAGGTTCACTAGTTTTGGGAAGAGGACATTATTGTGTAGAAGTAAGAGAGTATTATGCAAAACCACGCACGCGCGCCTTCGTCATCGTACCGTGCCGAGCCGGGTCATGGGCCTTGGTGAATGTGGGCCTTTAGGTCCACAAAGATTGTTTTCTTTTGGGACAATTTCTATTAACAATTTTATTAATTTTTTAAAAAGATATTTTGCATAAT

Boechera stricta (v1.2)

ID:

Scaffold15860_LTR_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4149

Start:

219632  

End:

223780

Strand:

-

>Scaffold15860_LTR_52

ACGTTGACCGTTCACCGTGAAGCTTTCTCCATTATTCCCCCATAATTTTATAGCTCTGTAAGGTGTCACCACCTTTATCTTGAATGGTCCGGACCATCGAGAACGAAGTTTGCCCAGAAAAAAACTTCAATCGGGAGTTGTAAAGCAGGACTTGATCGTTTACCGTAAACTCTTGTTGAAGTATTCGCTTGTCATGGAATGTTTTTGTCCTCTCTTTGTATATCCGGGCATTCTCATAGGCAGACAGGCTAATCTCGTCTAGTTCGTTTAATTGCATGAGGTGCTTTTCAGCAGCGGTTTTGATGTCGTAGTTcagcatcttgaCAGCCCACATAGCTTTGTACTCGAGCTCCACCAGTAGGTGACAAGATTTTCCATACAGAagattgaaaggAGTCGTACCTATAGGCGTTTTGAAAGGTGTCCGATAGGCCCACAAAGCATCGTCTAGCTTGAGTGACCAATCCTTTCGtgaaatgttcaCCGTCTTCTCTAAGATTGCTTTGATTTCACGGTTAGAAACTTCCACTGGTCCACTTATTTGAGGATGATATGGTGTTGCCACTTTATGTCTCACACCATGCTTTCGTAAGAGCTTAtcgaaagttctGTTGATGAAGTGTGTCCCTCCGTCTCTGATCACCATTCGCGGCATACCGAATCGTGGAAAGATGATGTGCTTAAAAAGTTTATGAACTACCTTTATGTCATTTGTTGGAATTGCCACAGCTTCTACCCATTTAGACACGTAGTCCACTGCTActaggatgtaGTTGTTTCCATGTGAGTTTGGGAAAGGTCCCATAAAATCGATTCCCCATACATCAAAGAATTCTACTTCCATTATCGGATTTTGAGGCATCtcattcctacgGCTTATGTTTCCTCTTCTTTGACATGCATCACAAGGTAGGATGAATCAATGAGCATCTTTAAACAAAGTCGGCCACCAAAATCCAgcttgcaaaacTTTAGCCACCGTCTTGAATGTAGCAAAATGTCCTCCGTATGTTGATCCATGGCATCTAGTCAAGATCCCGCAAACTTCATGCTCAGGAACACATCTTCTGTATATTTTATCCTTACATAGCATGAAGAGGTTTGGATCATCCCAATAACACTGATTGATCTCCTTGAAAAAAAATTTCTTGTGATATCCGACGATATCAGGTGGTTTTTCTCCACAAGCGAGATAATTGACGATGTTGGCGTACCATGGTGACTTGTCCTTGATGGCGTTGATGATTTTCAACTCCTTATTGAGGTTGTGTACGCCGATAAGTACTCTAATGGCATAGACTTGTTCCTCCGGTAGTGAATCATCGATAGGGATCTCGTCAGTGATTCTCAttcgagaaaggtgatcagctactccgttctctattcctctcttatcttttatctccaaatcgaactcttgaaggagtagtatccagcggagtagccttggttttgcgtccttcttagcgagtagataccttagtgccgcatgatccgtgtgtacaatgactttagaaccgactaagtattggcagaacttctcaaaaGCAAAGACGATCGCTAGAAGCTCTTTCTCCGTAGTGGCATAATTCATTTGCGGTTCGTCTAGCGTCGTACTTGTATAATAGATGACATTCTGCTTTCTGTCTTTTCATTGCCCAAGCACAGCTCCTACGGCATAGTCACTAGCATCACACATAATCTcgaatggtaaccCCCAATCTGGCGGTTGTACTATCGGTGCACTAACTAGCTCCTTCTTGATTTATCGGAATGATTTGAAACATTTGTCATCGAAGTTGAACTCGACATCCTTGCATAGTAGGTTGGTGAGTGGTCTTGCTATCTTAGAGAAATCCTTGATAAGTCTTCGATAAAAATTAGCATGACCAAGAAAACTTCGTATGTCTTTCACCATTTTTTGAGGCCCTAGACTTGTCATTACATCGATCTTGGCCATGTCGACTTCAATTCCTCTTTATGATATCTTATGCCCAAGAACGATTCCTTCTTTCACCATGAAATGACACTTctcccaattaaGTACTAGGTTTTTCTCTTCACACCGTTCAAGTACCTTGCACAAATTAGACAAACAACCACCAAATGAGAACCATACACAGAGAAATCATCCATGAATACCTCAACTACTGATTCAATCAAGTATGAAAATATTGACATCATGCACCGTTGAAAAGTCGCAGGTGCATTACACAACCCAAACCACATTCTTTGGTAAGCGAAGTTACCATAAAGACATGTAAATGTCGTTTTTTCTtgatcttgaggATGTATCGGGATTTGAAAGAATCTCGAGTACCCATCTAAAAAGCAATAGTGAGAATGATTAGCCAATCTCTTTAACATTTGATCAATAAACGGAAGAGGAaaatgatctttTCTAGTGGCAGCATTTAATTTTCTGAAGTTAATACACATCATATGTCCTGTGATAGTTCTAGTTGGAATTAATTCGTCATTTTCATTTTTTACCACAGTGATACCACCTATTTTAGGTACAACATGAACAGGTGAGACCCAAGTACTATCTGATATATGATAAATAATACCTGTATCTAGAAGTTTAAGAATTTCTTTTCTTACGACATCACGTAAGTTTGGATTTAGTCGCCTTTGTGGTTCAATTGAATTCTTAGGTTCATCTTCTAAATGTATTATATGCATGCATAAGGATGGGGATATGTCCTTGATATCATCTAGAGAATATCCTATTgcttttctatattttctcaattcatcaagtAAAAGAGAAATTTCATCATCATTAAGCTCATCACTTACTATGACAGGATAAGTTGAATTAGGAGCGAGAAATGCATACCTTAGCCCTTTCGGAAGTGGTTTCAACTCCACCTACAGTGCCTTGAGTTTGCTCCAATCATCTTCATCGCAAGTCTTACCATCGCTTGcttccaccgtgGCTTCTTCTTCTTCGTCACCTTCGATTAGACTCACGTATGCCATCTCATGAGGTAGCATGTCCGCCACGTCTCCATTTTGTAGTGTTTGGAATTCTTCACTTAGTTCTTCATTTTCGAGCTCAACTTCGTCCaacacaccatcAGTCAACAAGTCGAGATCGTCTATGTAGAAGATGCGGTTTCGTTCTTCAGGTTTCTTCATCACTTCGTCAATACTAAACTGTATAATTTCATCGTTAAGGTGAAGGTtaatcttcccaTTCTTGACATCGATGATGGCCCCCGCAGTAGCTAGGAATGGCCTTCCTAGGATAAGTGGATCCTTGGGTTCGTGATCCATCTTGACTACTACAAAGTCTGTCAGTATTTTGTATTCACTAATCATTACTGGAATGTCTTGAAGCAATCCCACTGGCATTTTAACTAAGCGATCGTCGAGAACTAGTGACATCTTACACTCCTTGAACCGagtaagtcccAACTTTTGTGCAATGGATAGAGGAATTAGATTCACATTAGCTTGAAGATCGCATAAAGATCTCCCGAATGTTATGTGACCGAGAGCGCAAGAGAAAGTGAAACTGCATGGGTCATCTAGCTTCCTTGGAATCTTCTTGTCGAGGATGACGGCACTACAATCGTGTGTCAAGAAAGCCACTTCGAATATTTCCTTTTTCTTCTTAGTTACAAGATCCTTGAGGAAATTGCTAGCGTTTGGAATCATCGTCAGGGCTTCTAGTATTGGCATAGTGATgatcacacctttcatttgttcttcaaatgcattcctcATTCTCTCCGCTATTCTTCCCTTAATTCTTTCCGGAAAAGGGATTTTAGGTTGATATTTTGGGAGATCATGTGTCACTTTTTTCCTTACGCGAGTCTCAGGTCCCTTTGTGGGAATTTCCGTAGTACGAATGTCGGGCTCCTTATCTTCGATTGGCTTCTCCATGATGACCTCCTCGATTTCTGGTTCCTTCTCGAAATTTATGGTTCCTTCTCGAATATCTGGGGATTCTCTTTCTCGACTATTGGTTTTTCCCTCTCGATCATGATATGCCCGTCTTCTTTTTCGATGTTAGCTCCTTCGCTTTTCTTGTTTATTGGCTGCTTAGGtggaatcggtcTGAGCTCCTTTCCACTCTTCAAGGTTATTGCTTTGACTGACGGAGACTCTTCCTGTGTTCTTGTTTCTGAATTTTGG

Boechera stricta (v1.2)

ID:

Scaffold15860_LTR_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

853

Start:

309573  

End:

310425

Strand:

+

>Scaffold15860_LTR_53

GCATGGCCTACGAGCCAACAAACCATGGTCAACACACGGGAATCTGGCCACCATCGGTAGTCGGAGTTGAATTCAAAATCAAGATCAGCTTGATTAACATGATCTAGGGTTATAAGTTTCACAGATTACCAATTGAGAACCCTATTGATCATCTGTatcaattcgaCAAGTTGTGTGAGATGGTGAAAGATGGTCTCTCTAAAGATGTACTAAAACTTCGTTTATTCCCATTTTCACTTGGGGGTAAAGCACAACAGTGAGAGAAGTACATTCCATCTTAGACCGTTACAATGTGGAGCAAATGCCGAAAAGCGTTCCTAACAAAGTTCTTCTCGAATTCTAGGACAACTCGTTGGAGAAACGAGATAtcaaacttcacACAACAAAACACTGAGAGCTTCGGAGAAGCATGGGAAAGGATTGAAAGATACACCAAGCAATGTCCTCATCATGGGTTCAGTGACGAGTCTTTACTGAGCATATTCTATAGAGGAGTTACTCCTAAATATCATACGTTActcgatataggCAGCCACGAAACTTTCTTGGGGCAAGACGCATAACACAGAATGAAGTTGGTAAAGAACTTAGCCGagagcgacgcgAGCTATGGAGAGGACTATGATCGAATGAACAGACACGTCGATATCCATGAAGACGAGGAGAAGGTGACCATAAAAGCGCTACATGAAAAGTTAGACAAAATTATGAAGTCAACGCAACATTTCATCCCGTCAAAACGTCACGAAGAACAACACCATCGAACATAGGAGGTCGATGGTCTTCCCAGCCGCACCATCGAGCAGCAACATCGAGCGTACACCATCGATGTAAAGTCAGGACAAGACATCGA

Boechera stricta (v1.2)

ID:

Scaffold15860_LTR_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2610

Start:

310469  

End:

313078

Strand:

+

>Scaffold15860_LTR_54

AACAAAGAGGCCAAATTCTTGATGACAAAGACGGACAGATTTGAAGGGATGACTCGGAATATCTTAGAGGAGCAGACAATCATGGTTACAACTTCTAGAGAAGAGTTCAAAGAGGTcaatcaacggtGTAACGAGCTAGATGAGAAGTTTGAAGACTTAGTTTCAAAAATCTAGATTCTAGAAACCAGAAAGATAAAGGAGGCACCGGCGATCAATGCAATAACCTGAAAGACTGGAAAGGAGCTCAGACCGATCCCACCTAAGCAACCGATCAAAAAGAAGAGCAAAGAGACTATCATCGAGAAAGAAGATCCAATCATAGAGAAGGGAGATTCAATCATCGAGAAAAAAGATCCTATTGTAATCGAGGAAGAACTCGAGATTGAAGAAGTCGTTAAGGAGAAACCGGATAAAGATAGAGAGCCTGCCACTCATGTAAGAAGCCTGGTGGCACTCGACATGCACAATTGTCAAACAAAAATTCTTTTTCCCGGGAGGATCAAATGGAGAATAGCGGAGAGAATTAGGAATGCATTTGAACAACAAATAAAAGATGTAATCATCCTTATGCCGATACTAGAAGCTTTGACGATGATTCCCAACGctagcaaattCCTCAAGGATCTCGTGACTAAGAAAAAGAAAGAGCTCACTAAGGTAGCATTCCTAACGCACGAGTGCAACGCAGTTATTCTCGACAAGAAAATTTGAAAGAAATTAGACGACCTCGGTAGCTTCACTCTCTCTGGCAATCTAGATCCGATGATATTTGGGAGATCTTTGTGTGACCTTGGAGCTAGTGTGAACCTTATGCCtctatccattgCACAAAAGTTGGGATTTACAAAATTCAAGGAACGTAGGTTGTCATTCGTTCTCGCCGATCGCTTGATAAAAACGCCGGTGGGATTACTCGAAGAAATTCGGTGATGATTGGTGACTACCaaattccaacCGACTTTGTGGTACTCAAGATCCTAAAGATCCTAAAGATCTACTCATCCTAGGGAGACCATTCATAGCAACCGCGGGAGCCATCATCAATGTCAAAAACGGAAAAATCGATcttcatctaaACAACGAAGTTATGTAGTTTAGTCTTGACGAAGTGATGAAAAAACCCGAAGAACGAAACCGCATCTTCTACATAGATGATCTCGACTTGTAGGCTGATGGTGTGTTTGACGAAGTTGAGCTCGAAAACGAGGAGCTAAGTGAAGAATTCCAAACACTACAAAATGGATACGTGGTGGACGTGATACCTCGTGAGATGGCTTATGCAAGTCTAACCGAAGGTGACGAAGaagaagaagtCATGGAGGAAGCAAGCAATGGTAAGACTTGCGATGAAGAGGATTGGAGCAAACTCAAAGCACGAAAAGTGGAGCTGAAACCACTTCCGAAAGGGCTAAGGTACGCATATCTCAGTCCTAATTCAACATATCATGTCATAGTAGGTGATGAGCTTAATGATGATGAAATTTCTTTTTTACTTAATGAATTGAGAAAATATAGAAAAGCAATAGGatattctctaGATGATATCAAGGGCATATCCCCATTCTTATGTATGCATAAAATACATTTAGAAGATGAATCTAAGAATTCAATTGAACCTCAAAGGCATTAAATCCAAATTTGCGTGATGTCGTAAGAAGAGAAATTCTTAAACTTCTAGATGcaggtattatTTATCCTATATCAGATAGTACTTAGGTCTCATCTGTTCATGTTGTACCTAAAAAGGGTGGTATCTCTGTGGTAAAAAATGAAAATGACGAATTAATTCCTACTAGAACTATCacgggacataGGATGTGTATTGATTTTAGAAAATTAAATGCTGCCACTAGAAAATATAATTTTCCTCTTCTGTTTATTGATCAGATGTTAGAACGATTAGCAAATCACtctcactattgCTTTTTAGATGGGTACTCGGGATTTTTTCAAATCCCGATACATCCTCAAGATCAACAAAAAACGATATTTACATTTTCTTATGGTACCTTTGCGTATCGCAAAATGCCATTTGGACTATGTAATGCACTTGCAACTTTTCAACGGAGTATGATGTCAATATTTTCAGATTGAATTGAATCAGTAGTTGAGGTGTTTATGGATGATttctctgtgtATGGTTCTTCGTTTGATGGTTGTTTGTCTAATTTATGCAAGGTACTTGAACGTTGCGAAGAGACAAACCTCGTGCTTAAttgggagaagTGTCATTTCATGGTGAAAGAGGGAATCGTTTTTGGACATAAGATCTCTGGGAGAGGAATTGAAGTTGACAAAGCCAAAATCAATGTGATGATGAGTTTAGGACCTCCGAAAATGTTGAAGGATATATGGAGTTTCCTTGGACATGCCGGGTTTTATCGAAGATTCATTAAAGATTTCTCTGAGATAGCATGCCCACTCACAAGGCAAGGAGGTTGATTTTGATTTTGATGATGCATGTCACGAAGCGTTTCAGTCCATCAAGAAGGAGCTAGTAAGCGCACCGATAGTACAACCACTGGATTGGGAGCTGCTGTTTGAGATCATGTGTGATGCTAGCGACTATGCGGTTGGAGCTGTGCTTGGAAAACGGAAGGATAAGAACTT

Boechera stricta (v1.2)

ID:

Scaffold16327_LTR_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1523

Start:

38380  

End:

39902

Strand:

-

>Scaffold16327_LTR_55

TTCATTAAGTAACATTGAGGTttcatcatcatTTAGTTCATCGCTTATTATGACAGGATATGTTGAATTTGGGCCGGGAAATGCGTACCTTAGCCCTTTCGGAAGTGGTTTCAGCTCCACTTTCGGTCTTTGAGTTCGCTCCAATCATCTCTGTCGCAAGTCTTACCATCACTTACCTCTACCGTGTCTTCTTCTTCTTCGTCATTTTCGGTAAACTCTCGTAAGCTATCTCATGAGGTATCATGTCCGCTACTTCTCCATTTTGTAGCGTTTGAAATTCTTCACCTAGCTCCTCGTCTTTGAGTTCAACCTCATTTAATATGCCATCAGCAAGAAAGTCGAGATCGTCTATGTAGGAGATACGATCTCGATCTTTGGGTTTCTTCATCACCTCTTTGATACTAAACTGCATAACTTCATCATTTAGGTGAAGATTGATCTTTCTGTTTTTAACATCAATGATGGCTCCCGTTGTTGCTACGAATGGTGTTCCTAGGATGAGTGGGTCTTTGGGCTCATGATCCATCTTGAGTACCACAAAGTCggttggtattTGGTACTCACCAATCATCACCGAAATATCTTCAAGTAATCACACCGGTGTTTTAATCGAGCGATCGGCGAGAGCTAGCGACATCCTACAGTCTTTGAATCGAGTAAATCCCAACTTTTGTGCAATGGATAGAGGCATGAGGTTCAAACTAGCTCCAAGATAGCACAAAGACATCCCAAATGTTATTTGACCGAGAATACAAGAGAGAGTGAAACTACCCGAATCGACTAACTTTCTTGGAATCTTTTTTATCGAGAATGATGGCGCTACACTCGTACGTTAGGAATGCCACCTCGGTGAGCTTCTTTTTCTTCTTAGTCACGAGATCCTTGAGGAATTTGCTAGCGTTGGAAATCATTGTTAGGGCTTCTAGTATCGGCATAGtgatgattacgCCTTTCATTTGTTCTTCAAATGCGTTCGTCATTCTCTCCGCTATTTTTTCTTTAATTCTTCCCGTAAAAGGAATTTTAGGTTGATACTTAGGTAGATCGGGTATCATTTGGCTCCTTACACAAGTATTAGGTTCCCTTGTACGAATGTTGGTTGTACGAACGTCGGGCTCCATATCCTCGTCCGGCTTCTCTGTAATGACTTCCTCAACTTCTGGTTCTTACTCTAATATGATGGGATTTTCCTTCTCGATTATGATAAGATCGTCTTTTTTCTCGATGTTAGTCTCTTCACTCTTCTTGCTGATTGGTTACTTTGGTGGGATCAGTATGAGTTCTTTTCCACTCTTCAAGGTTATTGCATTGATTGTTGGTGCCTCCTTTATCTTTCGGGTTTCTAGAATCCAGATTTTTTAAACCAAGTCTTCGAACTTCTCATCTAGCTCGTTACATTGTTTATTGACCTCTTTGAACTCTTCTCTAGCAGTTGTAACCATGCTTGTCTGTTCCTCTAAGATATTCAGAGTCATCCCCTCAAATTTGTCCATCTCTATCGTCAAGAATCTGGCTTTCTCGTT

Boechera stricta (v1.2)

ID:

Scaffold1774_LTR_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

900

Start:

226376  

End:

227275

Strand:

-

>Scaffold1774_LTR_56

TTACCATGAGAGTTCGGGAAAGGTCCCATGAaatcgatgccCCACACATCAAAGACTTCTACCTCCATTATCAGGTTTTGAGGCATTTCGTTCCTTCGACTTATGTTTCCTCTTCTTTGACATGCATCACAAGCTAGgatgaatcggtgagtgtctctaaacaaaatcggccaccaaaATCCAGCTTGCAAAACTTTAGCCACCGTCTTGAATGTAGCGAAATGTCCTTCGTATGTTGATCCATGGCATCCCGTCAAGATCCCGCGAACTTCATGTTCATGAACACATCTTCTGTATATTTTATCCTTACACAGCGTGTAGAAGTTTGGATCATCCCAATAATACCGACTGATCTCCTTGAAAAACTTTTTCTTGTGATATCCGACTAGATCAGGTGGTTTTTCTCCACAAGCGAGATAATTGACGATGTCGACGTACCATGGTGACTTGTCCTTGATGGCGTTAATGCTTTTCAGCTCCTTATTGAGGTTGTGTTCGCTGATAAGTACTCTAATAACGTAGACTTGCTCTTCTGGTAGTGAATCGTTAATAGGTATCTCGTCCTCGATCCTCATCCGAGAAATATGATCAGCCACTCCGTTTTCTATGCCTCTCTTGTCTTTTATCTCTAAATCGAACTCTTGAAGAAGTACTATCCAACAGAGTAGCCTCGGCTTCGCATCTTTTTTTGCAAGTAGATTCCTTAATGCTGCATGGTCCGTGTGAACTATCACTTTTCAGCCGACAAAGTATTCATGGAACTTCTCAAAAGCAAAGAcgatcgctagAAGCTCTTTCTCCGTAGTAGCATAATTCATTTGCGCTTCGTCTAGTGTTCTGCTCGCATAATAGATGACATTCAGCTTCTTATCCTTGCGTTGTACTAGCACAGCTCCTATC

Boechera stricta (v1.2)

ID:

Scaffold1774_LTR_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

164

Start:

391396  

End:

391559

Strand:

-

>Scaffold1774_LTR_57

CCCCCACATATTCTTGGCTACCCAAGATTCCTGCAACATTGAATTCATCAATTCTTTCAGAGTTTGATTTTTACATTCTTCAACTCCGTTAGATTCTGATGAATAAGGAGCGGTCGTTTGATGATTAATGTCTTTTTCTTAACAGAATGCATTAAACGGACTAT

Boechera stricta (v1.2)

ID:

Scaffold1774_LTR_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1151

Start:

455458  

End:

456608

Strand:

-

>Scaffold1774_LTR_58

ATTTCAAGTACCCATCTAAAAAGCGATAGTGAGAGTGATTTGCTAATCGTTCTAACATTTGATCAATAAACAGAAGAGGAAAATGATCTTTTCTagtggcagcaTTTAATTTTCTAAAATCAATACACATCCTATGTCCGGTGATAGTTCTAGTTGGAATTAATTCGTCATGTTCATTTTTTATTACAGTTATTCCACCctttttagggaCTACATGAACAGGTGAAACCCAATTACTATCAGAAATAGGTTAAATAACACCCGCATCTAGAAGTTTAAGAATTTCTTTCCACATTACATCTCGTAAATTTGGATTTAAACGTCTTTGAAGGTCAATGGAATTTTTAGATTCATCTTCTAGATGTATTCTATGCATGCATAAAGATGGAGATATTCCCTTGACATCATCTAAAGAATATCCTATGGCTTTCCTATATTTTTTTAATTCACTAAGTAGCATAGAGGTTTCATCTTCATTTAATTCATCACTTATTATGACTGGATATGTTGAATTAGGACTGAGAAACGCGTACCTTAGCCCTTTCGGAAGTGATTTCAGCTCCACCTTTGGTGCTTTAGGCTCGCTCCAATCGTCTTCGTCGCAAGTCTCACCATCGCCTGCTTTTACCGTGGATTCCTCTTCTTCTTCACCCTAGGTTAGACTCGCATAAGCCATCTCACGAGGTATCATGTCCGCCATGTCTCCATTCTGTagtgtttggaATTCTTCACTTAGGTCCTCGTCGTTAGGTTCAGCCTCATCTAATATGCCATTAACTAGTAAGTCGAGATCGTCTATATAGAAAATACGATCTCGTTCTTCGGgtttcttcatcACCTCATCGATACTAAACTGCATGAATTCATCGTTTAGGTGAAGGTTGATCTTTCCGTTTTAACATCGATGATGGCTCCCGCAGTTGCtaggaatggtCTCCCTAGGATGAGTGGATCTTTGGGCTCGTTATCCATCTTGAGTACCACAAAAtcagttggaaTTTGGTAGTCACCAATCATCATCGGAATGTCTTTGAGTAATCCCACCGACGTTTTTATCGAGCGATCGGCGAGAAcgagtgacatcCTACATTCCTTGAATTTTGTAAATCTCAAATTTTGTGCAATGGATAGAGGCATAAGGTTCACACTAG

Boechera stricta (v1.2)

ID:

Scaffold1774_LTR_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1539

Start:

456605  

End:

458143

Strand:

-

>Scaffold1774_LTR_59

CTAGTATCGGCATAGTGATGATTACACCTTTTATTTGCTGTTTAAATGCATTCCTCATTCTCTCCGCTATTCTTCCTTTTATCCTTCCCGGAAAAGGAATCTCAGGCTGATAATTATGTACGTCAAGTGTCACCTAACTCCTTCCTCGATTATTAGCCTCTTTATCCTTATTTGGTTTCTCCTTGATAACTTCCTCAATCTCgggttcctcttCAATTACGATGTGGTCTTCTTCATCGATGATAGGATCTTCTTTTTCAACGGTATGGTCTTCTTTCTTGATGATGGTCTCGTCGTTCTTTTTGCTGATTGGTTGCTTAGGTGGGATAGGTCTGAGATCCTTTCCATTCTTCAAGGTTATTGCATTGATTGTTGGTGCTTCCTCCATAGTTCGAGTTTCTAATATTTGGACTTTAGAAACCAAGTCTTCGAACTTCTTGTCTAACTCGTGACACCATTGATTAACCTCCTTGAACTCTTTTCTAACAATTGTAACCATGCTTGTCTGCCCCTCTAAGATAttccgagtcatCTCCTCCAGTTTGCCTGTCTTAGTCGTCAAGAATTTCGCTTCTTCGTCTTCCCCAGGTATAacatcgaccacGTTCGGTCGATGTGCCTGATTGATATGGATGGCATCGACCTCGCATGGTCGATGTGGTTGGTCTTCGGCTCTTTCTGGCGGGGCATCGACAACATATGCTCGATGGTGCTACTAGGAAGACCATCGAACCTCCTGTGGTCGATGGTGTTGTTCTTCGTGACGTTTTGACGGGATGAAATGCTGCGTCAATTTCAGAACCTTGTCTAACTTTTCATGTATCGCCTTTATGGTCAGCTTGTCCTCGTCTTAATGGATGTTGATGTGTCTGTTCAGTCGATCATAGTCTTCCCCATAGCTCGCATCGCTATCGGCTAAGTTCTTTACCAGCGTCATTCCGTGTTGCGCGTCTTGCCCCAAgaaagttccatggctgcctatatcaagtaacgtacaatatttaggagtaactcctctgtagaatatgctcagcaaagcctcgtcgctgaatccatgatgaggacaatgcttggtgtatctttcaatcctttcCCACGCTTCTCTGAAGCTCTCAGTGTTTTGTTGTGTGAAGTTTGATATCTTGTTTCTCCAACGAGCTATCCTAGAGTTCGAGAAGAACTttgttaggaaCGCTTTCCGGCATTCACTCCACGTTGTAATGGTCTCAGATGGAATGTATTTCTCCCACTCTTGTGCTTTACCCTCGAGTGAAAACGGAAATAAACGAAGTTTTAGTGCATCTTCAGAGAGACCGCATATCTTCACCATCTCACACAACTTGTCGAATTGAAACAGGTGATCAATAGGGTTCTCCGTTGATAATCCGTGAAACTTGATTTCGAATTCAACTCCAACTACTGGTGGTGGCCATATTCCCGAGTGTTGATTTTGGCTTGTTGGCTCGTCGGCCATACCTATTGTTCGTACCACCCTTTGCCTACGCACCACGTTCTCATTCTCCCTGTCCAGCAACCAGT

Boechera stricta (v1.2)

ID:

Scaffold18351_LTR_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

3869

Start:

156073  

End:

159941

Strand:

-

>Scaffold18351_LTR_60

TGTCCGTTCACCTTGAagctctctccACTGTTGCCCCATAGCTCTATAGCTCCATAAGGCGTTATAGACTTTATCTTGAAGGGTCCGGACCAACGAGATAGGCGCTTTCCCGGAAAAAGCTTCAAACGAGTTGAATAGTAGAACTTGATCGTTTTCCCGGAACTCTCTTCAAAGTATTCTCTTTTCATGGCATGTCTTAGTCTTCTCCTTATATATCCGAGCATTCTCATAAGTGTCTCGGCTAATCTCGTCTAGCTCGTTCAGTTGCATTATGCGCTTCTCCGCAGCGGTTTTTATGTCGTAGTTCAGCATCTTGACAGCCCAcataactttgtattctagctcaaccggaaaatgacaagactttccatagagaaggttgaaaggagttgtaccaatgggagtcttgaaagctgttcgataagcccacaaagcatcgtctagcttaagcgaccagtcttttcgtgaaatattcaccgtcttctccaagattgctttgatttcccggtttgaaacctccacttgtctgcttgtttgaggatgatatgttgttgccaccttgtgtctaatgccatgcttccttaggagTTTGTCGAAAGTTTTGTTAATGAAGTGTGTTCCTCCGTCGCTAATCACCATTCGCAGAACTCCGAAACACGGGAAAATGATGCTCTTAAAAAGTTTCAGAACTACCTTCACATCGTTTGTTGGACACGCCACAACTTCTACCCAtttagatacaTAATCAACCGCCACTAAGATGTAGTTGTTACCATGAGAGTTCGAGAAAGATCCCATGAAATCGATGCCCCACACGTTAAAGACTTCTACGTCCATTATCGGGTTTTGAGGCATCTCGTTCCTTCGAGTTATGTTTCCTCTTCTTTGACATGCATCACAAGCTAGGATgaatcggtgagTGTCTCTAAACAAAGTCGGCCACCAAAATCCAGCTTGTAAGACTTTAGCCACCGTTTTGAATGTAGCGAAATGTCCTCCATATGTTGATCCATGACATCCCGTCAAAATCCCGTGAACCTCACGCTCCAGAACACATCTTCTATATATTTTATCCTTACACAATGTGTAGAGGTTCGGATCATCCCAATAATaccggtttatCTCCTTGAAAAACTTTTTCTTGTGATATACGACAAGATCAGGTGGTTTCCCTCCACAAGCGAGATAGTTGACGATGTCAGCGTaccatggtgaTTTGTCCTTGATGGCATCGATGCTTTTCAGCTCCTTGTTGAGGTTGTGCTCGCCGAAAAGCACTCTAATAGCATAGACTTGCTCCTCCGATAGTGAATCATCGATAAAGATCTTGTCAGTGATTCTCATTCGAGAAAGGTGATCAGCTACTCCGTTTTTTATTCTTCTCTTATCTTTTATCTCCAAatcaaactcttGAAGGAGTAGTATCCAGCGGAGTAGCCTTGGTTTTGCATCATTCTTAGCGAGTAAATACTAGAGCGCCGCATGATCCGTGTGAACTATGACTTTTTAGCGACTAAATATTGTCTGAATTTCTCAAAAGCAAATACGATCGCTAGAAGCTCCTTCTCAGTGGTGGCATACTtcatttgagttTCATCTAGCATCCTACTCGCGTAGTAGATGACATTTATCTTCTTATCTTTACGTTATCCAAGAACAGCTCCCACAACATAATCGATAGCGTCACACATTATCTCGAACAGCAATTCCCAATCCGGCGGTTGTACTATCGGTGCACTCACTAGCTCCTTGATTGATCGGATTGCCTCGGAACATGCGTCATCGAAGTTGAACTCGACATCCTTGCATAGCAggctggtgagtggtcttgctatcttagaaaaatctttgatGAATCTTCGATAAAAATTAGCATGACCAAGGAAACTTCGTATGTCTTTCATCGTTTTTGGAGGTCCTAGACTTGTCATCACATCGATCTTGGCCttgtcgacttcAATCCCTCTTTCTGATATCTTATGCCCGAGAACGATTCCTTTTCTCACCATGAAATGACACTTCTCCCAATTAAATACGAGGTTCATCTCTTCGCAACGTTTTAGTACCTTGCACAAATTATTCAAACAACCACCAAACGAAGAACCATACACAAAAAATTATCCATAAACACCTCATCTACTGATTCAATTAAATCTGAAAATATCGACATCATATACCTTTGAAAGGTTGTAGGTGCGTTACATAGTCCAAACAGCATTCTTCGATAAGCAAAGGTACCGCAAGGACATGTAAATATCGTTTTTTCTTGATCTTACGGGTGTATCGAGATTTGAAAGTATCCTGAATACCCATCTAAAAAACAATAGTGAGAATGATTAGCTACTCGTTCTAACATTTGATCAGTAGAGGAGAATGATATTTTCTAGTGGCAACATTTAATTTCCTAAAATCAATACACATCCTCTGTCCCGTGATAGTTCTAGTAGGAATTAATTCGTCATTTTCATTCTTTACCACAGTGATACCACTCGTTTTAGGTACAACATGAACAGGTGAGACCCAATTACTATCTGATATAGGATAAATAATACATGCATCTAGAAGTTTAAGAATTTCTTTTCTTACGACATCACGTAAAtttggatttaATCGCCTTTGAGGTTCAATTGAATTCTTAGATTCATCTTCTAAATGGATTCTATGCATGTATAAGGATGGGGATATTCCCTTGATATCATCTAGAGAATATCCTATTGCTTTTCTTTATTTTCTCAATTCATTAATTAAAAGAGAAATTTCATCATCATTAAGCTCATcacttactatgACAGGATATGTTGAATTAGGACCGAGATATGCTACTTTAGCCCTTTCGGAAGTGGTTTCAGCTCCACTTTCGGTGCTTTGAGTTTGCTCCAATTGTCTTCATCGCAAGTATTACCATTGCTTGCTTCCTCCATGGCTTCTTCTTCTTCGTCACCTTCGGTTAAACTTGcataagccatcTCACGAGGTATCATGTCTGCCACGTCTCTATTTTGTAGCGTTTGGAATTCTTCACTTAGGTCCTCGTTGTTAAGTTTAACTTCTTCTAATATGCCATCAGCTAGCAAGTCGAGATCGTCGATGTAGAAAATATGATCTCGTTCTTTGGGTTTCTTCATCACCTCATTGATActaaactgcaTGACTTCATCGTTTAGGTGAAGTTTGATCTTTCCATTTTTAACATCGATGATGGCTCCCACGGTTGCTAGGAATGGAGTGATCTTTGGGCTCGTGATCCATCTTGAGTACCACAAAATCAGTTGGAATTtggtagtcacgaatcatcactggaatgtcttcgagtaatcccaccggcgtttttatcgagcgatcggcgagaacgggtgacatcctacattccttgaattttgtaaatcccaacttttgtgcaatggatagaggcataaggttcactctagctccaaggtcacataaagatctcccaaatatcATCGGACCTAGATTGCAAGAGAGAGTGAAGCTACCCGGATCGTCTAATTTTTATGCAATTTTCTTGTCAAGAATAACTGCGCTGCACTCGTGCGTTAGGGATGCTACCTCAGTGGGCTCTTTCTTTTTCTTAGTCACGAgatccttgagGAATTTGCTAGCGTTGGGAATCATTGTCAAATCTTCTAGTATCGGCATAGTGATGATTACACATTTCATTTGTTTTTCAAATGCATTCCTCGTTCTCTCCGCTATTCTCCCTTTGATCCTTCCCGGAAAAGAAATCTTAGGCTGATAATTACGTAATTCGAGTGTCACCTGGCTCTTTCCACGAGTATTAGGCTCTCCATCCATGTCCggcttttcctTAATAACTTCTTCAATCTCATGTTATTCATCGGTTTCAATAG