ID Class Order Superfamily Length Start End Strand View
Scaffold2021_LTR_81 RetrotransposonsLTRLTR4162511569515730+
Scaffold2021_LTR_82 RetrotransposonsLTRLTR5038791773796810+
Scaffold2021_LTR_83 RetrotransposonsLTRLTR4338913593917930-
Scaffold20332_LTR_84 RetrotransposonsLTRLTR1776531265488+
Scaffold20332_LTR_85 RetrotransposonsLTRLTR35336573769269+
Scaffold2066_LTR_86 RetrotransposonsLTRLTR14752215367-
Scaffold20910_LTR_87 RetrotransposonsLTRLTR4231192158196388+
Scaffold20968_LTR_88 RetrotransposonsLTRLTR18567490576760+
Scaffold20968_LTR_89 RetrotransposonsLTRLTR8278780088626+
Scaffold20968_LTR_90 RetrotransposonsLTRLTR1872119985121856+
Scaffold20968_LTR_91 RetrotransposonsLTRLTR516135196135711+
Scaffold21554_LTR_92 RetrotransposonsLTRLTR1030135794136823-
Scaffold21554_LTR_93 RetrotransposonsLTRLTR2555153783156337+
Scaffold21942_LTR_94 RetrotransposonsLTRLTR29483319636143-
Scaffold22157_LTR_95 RetrotransposonsLTRLTR2542940329656+
Scaffold22157_LTR_96 RetrotransposonsLTRLTR241615885616125+
Scaffold22157_LTR_97 RetrotransposonsLTRLTR721617075617795+
Scaffold22157_LTR_98 RetrotransposonsLTRLTR208622273622480+
Scaffold22545_LTR_99 RetrotransposonsLTRLTR2265692557150+
Scaffold22685_LTR_100 RetrotransposonsLTRLTR2135214791216925-

< 5 6 7 8 9 > Total 13


Boechera stricta (v1.2)

ID:

Scaffold2021_LTR_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4162

Start:

511569  

End:

515730

Strand:

+

>Scaffold2021_LTR_81

TGATCAAGCAAATGTGCAAAGGCCAGCGAAGAATTCACAAATATTgaacaaagatGGCGCGAACTAGATAAGAAGTTTGACGATTTGGTTTATAAAGTCCGAGTATTAGAAACCTAAACTATTGAGGACACCAATGATCAACTCTATAACCTTGAAGAGTGGAAAGAAGCTCAGACCGATCCCACCGAGATAACCAATCAACAAAAAGAGGGATGAAACTATCATCGAGAAAGAAAATCCGATCATTGAGAGggaggatccaATACTCGAGAAAGAAGATCCCATCGTAACCGAGGAAAAACAAGAAATTGAAGAAGTTATTAAGGAAAAATCAGACACGGATGTGGAACCTGATACTCGTGTGAGGAGCCAAACGATACCTGATCCACTTAAATATCAACCTAAGATCCCTTTTCCGGGAAGGATCAAAGAGAGGATAGCAGAGAGACTGAGGAATGTATTTGAACAACAAATGAAGGACGTAATCATCACTATGTCGATACTAGAAGCTTTGACTATGATTCCCAACACTAGCAAATTCCTCAAGGATCTCGTAACTAAGAAGAAGAAGTAGCTCACCGAGATTGCGTTCCTAACACATGAATGCAGCGCGATTATCCTTGACAAAAAGATTCCAAAGAAATTGGACGATCCGAGCAGCTTCACTCTCTCTTGCAGTATAGGTCCAATAACATTTGAGAGATGTCTATGTGATCTTAGAGCTAGTGTGAACCTCATGCCTCAATCCATTGCACAAAATTTGGGATTCAATACCTTCAAAGAATGTAGGATGTCACTCATTCTCGCCCATCACTCGATAAAAACGCCGGTTGGATTACTCGAAGACATCCCGGTGATGATTAGTGACTACAAAATTCCAACCGACTTTGTGGTACTCAAGATGGATCACCAGCCTAAAGATccactcatcctagggAGACCATTCCTAGCAACCGCGGGAGCCATCATCGATGTTAAAAACAGAAAAATCAACCTTCACCTAAACGACGAAGTAatgcagtttaGTATCAATGAGGTGATGAAAAAATCCGGGAAACGAGATCGTATCTTCTTCATAGATGATATCGACTTGTTGGCTGATGGTGTGTTGGATGAAGATGAgctcgaaaacGAAGAGCTAAGTGAGGAATTCCAAACGCTACCAAATGAAGACGTGACGGGCATGATACCTCATGAGATGGCTTACGTGAGCCTAACCGAAGGTGACGAAGAAGAAGAAGCCACGGAGGAAGGAAGCGATGGTAAGAATTGCGATGAAGGCGATTGGAGCGAACTCAAGGCGCCGAAGTGGAGTTGAAACCACTTCCGAAAGGGATAAGGTACGCATTTCTCGGTCCtaattcaacatATCCTGTCATAGTAAGTGATGAACTTAATGATGATGAAATTTCCCTTTTACTTTGTGAATTGAGAAAATATAGAAAAACAATAAGATATTCTCTAGATGATATCAAATGCATATCCCCCTCCTTATGCATGCATAGAATACATTTAGAGGATAAATCTaagaattctattgaacctcaaagacgtttaaatccaaatttgcgtgatgtcgtaagaaaagaaattcttaaacttctagatgcaggtattatttatcctatatcagatagtacttggatctcaccTGTTCATGTTGTGCCTAAAAAAGGTGGTATCACTGTGATAAAAAATGAAATGACGAGCTAGTTCCTACTAGAACTATCAccgggcataggATGTGTATTGATTTTAGAAAATAAAATGCTGCCACTAGAAAAGATCACATTCCTCTTCCATTCATTGACCAAATGTTAGAAAGATTAGCGAATTACTCTCACTATTATTTTTTAGATGGGTATTCAAGATTCTTTCAAATCCTAATACATCCTCAAGATCAAGAAAAAATGACATTTACATGTCcttacggtacCTTTGCTTATCGAAGAATGCCGTTTGGATTATGTAATGCACTCGCGACTTTTCAACAATGTATGATATCGATATTTTCAGATTTAattgaatcagTAGTTGAGGTGTTTATGGATGATTTCTATGTGTATGGCTCTTCGTTTGGTGGTTATTTGTCTAATTTGTGCAAGGTACTCAAACAATGCGAAGAGACAAACCTCGTACTTAATTGAGAAAAGTGTCATTTCATGGTGAGAGAAGGAATCGTTCTTGGGAAAAAGATATCTGAAAGAGGGATTGAAGTCAACAAAGCCAAGATTGATGTGATGATAAGCCTAGGGCCTCCAAAAACGGTGAAAGACATACAGAGTTTTCTGGGTCATGCGGGATtttaccgaagaTTCATCAAAGACTTCTCAAAAATTGTAAGACCGCTCACGAGATTGCTATGCAAGGAGGTGAACTTCGACTTTGATGACGCATGTCAcgaagcatttcAATCCATCAAGAAGGAGTTAGTAAGCGCACCAATAGTACTACCACCAGATTGGGGATTACCATTCGAGATCATATGTGATGCTAGCGATTATGCAGTAGGAGCTGTGCTTGGATAACGTAAAGATAGAACGTCATCTATTACGCTAGTAGGATGCTAGACGAAGCGCAAATGAATTACGCCACTACGGAGAAAGAACTTATAGTGATCGTCTTTGCTTTTAAGAAGTTCCGCCAATACTTGGTCGGTTCTAAAGTTATTGTacacacggatcATGCAGCCCTAAGGTACCTACTTGCGAAGAAAAATACGAAGCCAAGACTACTCCGCTGGATATTACTCCTACAAGAGTTcgatttagagaTAAAAGACAAGAAAGGAATAGAGAACGGAGTGGCTGATCACCTTTCTCGAATGAGGATCACTGAGGAGATTCCTATTGACGAATCACTACCGGAAGAGAAAGTATATGCCATTAGAGTTCTTGTTGGCGAGCATAAACTCAACAAGGAGCTGAGAAGCATCAACGCCGTCTAGGACAAGTCACCATGGTATGGTGACATCGTCAACTATCTCGCATGTGGGGAGAAGCCGGCCGATCTCATCGAATACCATAAGAAAAAGTTATACAAGGAGATAAACCGAAACTATTGGGATGATCTGAACCTCTACACGTTATGCAAGGATAAGATATATAGAAGATGTGTTCCGGAAAATGAAGTTCACGGGATTTTAACGGGGTGCCATGGATCGACATACGGAGTACATTTTCCTACATTCAAGACGGTGGCTAAAGTTCTACTAACTGGGTTTTGGTGGCTGACTTTATTTAGAGATGCTCACCGATTCATTCTAGCTTGTGATGCATGTCTAAGAAAAGGAAACATAAGTCGAAGGAAAGAGACGCCTCAAAACCTGATAATGGAGGTAGAAGTCTTTCACGTGTGGGGCATCGATTTCATGGGACCTTTCTCGAACTCTCATGGTAATAACTACATCTTAGAGGCGGTTGATTATGTATCTAAATGGGTAGAAGTTGTGGCGTGTCCAACAAacgatgtgaaggtaggtctgaaactttttaagagcatcattttcccgcgtttcggagttccgcgagTGGTGATTAGCGACGGAGGAACGCACTTCATTAACAAAACTTTCGATAAAATCCTAAGGGAGCATGGCGTTAGACACAAGGTGGCAACATCATATCATCCTCAAACAAGCGGACAAGTGGAAGTTTGAAACCGGGAAATCAAAGCAATCTTGGAGAAGACGGTGAATATTTCACCAAAAGACTGGTTGCTTAAGCTAGACGATGCTTTGTGAGCTTATCGAACAACTTTCAAGACTCCCATTGGTACAACTCCTTCTCTATGGAAAGTCTTGTCATTTGCCGGTTGAGCTAGAATACAaagctatgtggGCTGTCAAGATGTTGAACTACGACATAAAAACCGCTGCGGAGAAGCGTCTAATGCAACTGAACGAGCTAGACAAGATTCACCGAGACGCTTATGAGAATGCCAGGATATAAAAGGAGAAGATTAAGGCATTCCATGAAAAGATAATACTTCGAAGAGAGTTCAGGGAAAAAGATCAAGTTCTATTATTCAACTCTCGTTTGAAGCTCtttccgggaaaGCTCCAATCTCGTTGGTCCGGACCCTTCAAGATAAAATCTGTAACACCTTACAGAGCTTTAGAGCTATGGGGCAACAGTGGAGAGagcttcaaggtGAACGGACA

Boechera stricta (v1.2)

ID:

Scaffold2021_LTR_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

5038

Start:

791773  

End:

796810

Strand:

+

>Scaffold2021_LTR_82

GCCGACGAGCCAACAAGCCACGGTAACCGCATAGGCTTAAGGCCATCACCTGTGGGAGATGTGGAGTTCGAAATCAAGGCCGACTTGATCAACATGATCCAGGGCGATAAGTTTTACATTCTATCAATAGAGAACCCTATAGACCATATGAATCTATTCGACAAGGTGTGTGATATGGTGAAAATGAACGGCCTCTCGGAAGAAGCACTAAAACTTCGTTTATTCCCATTTTCACTTgggggtaaagCACAAAAGTGGGAGAAGTACATACCATCGGAGACTGTTACAACGTGGACTGAATGCCGGAAAACATTTTTGAAAAAGTTCTACTCAAACGCTAGGACAGCTTATTTGAGAAACGAGATATCAAACTTCACACAACAAAACACTGAGAGCTTCTGAGAAGCATTAAAAAGGATGGAACGATACACCAAGCAATGTCCTCATCATGGATTCAGCGACGAGTCTTTGCTGAGAATATTTTTCAGAGGAGTTAATCCTAAATATCGTTCGCTACTCGATATAGGTAGCCACATAACTTTCTTGGGGCAAGACACGCAACATGGAATGACGTTGGTAAAAAACTTGGCCGAGAGTGACGCGAGCTATGGAGAGGACTACGACTGAATGAATAGACTCGTCGACATCCATGAAGACGAGGAGGAGCTTACCATGAAAGTGCTTCACGAAAAGATAGACAAAATTATAAGGTTAACGCAACATTTCGCCCCACCAAAACAACATGCAGAACAACACCTTCGACTAGGAGGGGTCGACGGCCTTCCGAGGAGGACCATCGAGCAAGACAATTGATCGTACGCCGTCGACATGACATAGGAGACAAGCATCGACTAGCTATATCAAGCATACCACATCGACGCAACTAAAACCGGACATAAACATCGACCATACATGGTCGATGCTCAGTCTGAGAATAACGAGGAGACAAGTTTCTTGACGGCTGAAACGGACAAGCTTGAGGAGATGGTTCAGAATGTTCTAGGAGAATAGACAAGCATGGTTACAAGGGGTAGTGAAGACTTTAAGGAGGTTAACCAACGGTGTCACGAGTTAgatgagaagtTCGAAGACTTGGTTTCTAAGGTCCACAAACGAAACAAAGACATTGGAGATAACACCAACAATCAATGCGATAACCTTGAAGAGTTGAAAGGAGCTCAGACCGATCCCACCTAAGCAACCAATCAACAAAAAGAGCAACGAGACTATCATTGAGAAATAAAATACGATCATCGAGAAGGAAAACCCAATCCTCGAGAAGGATGATCACATTGAAAATGGAGGAAGAGCCTGAGATTGAAGAAATTATTAAGGAGAAACCAGATACGGATGGAGAGCCTAACACTCGTGTAAGGAGCAAGGAGACACTTGACTTACGTAATTATCAGCCTAAGATTCCTTTTCCGGGAAGAATCAAAGGGAGAATAGCGGAGAGAATGAGGAAtgcatttgaaCAACAAATGAAAGGTGTAATCATCACTATGCCAAGACTATAAGCTCTGACGATGATCCTCAACGCTAGCAAATTCCTCAAAGATCTCGTGAATAAGAAAAAGAATTAGCTCACCGAGGTAGCATTTCTAACGCACGAGTGCAGCGCCATCATTCTCGACAAAAAGATTCCAAGGAAGTTAGACGATCCGAGTAATTTCACTCTCTCTTGTACTCTCggtcaagtaaCATTCGGGAGATCTTTGTGCGACCTTGGGGCTAGTGTGAATCTCATGCCTCTATCCATTGCACAAAAGTTGAGATTTACTAAATTCAAGGAGTGTAGGGTGTCACTCGTTCTCGCGCTCGATAAAAAGGCCGGTGGGATTACTTGAAGACATTCCGGTGATGATTAGTGAGTACCAAATTCCGACTGATTTTGTGGTACTCAAGatggatcacgaGCCCAAAGATCCACTCATCCTAGGTAGACCATTCATAGCAACTGCGGGAGCCATGATCAACGTTAAAAATGAAAAAATCAACCTTCACCTAAACGATGAAATCATGCAGTTTAGTATCGCTGAGGTGATGAAGAAACTCAAAGAGCGAGATCGTATCTTGACGAGGTACCTAGACGATCTCGACTTGCTAGTTGATGGTGTATTAGACGAGGTTGAACTAAACAACGAGGAGATAAGTGAAGAATTTTAAACGCTACAAAATAGAGAAGTGGCGGACATGATACCTCGTGAGATGGCTTATTCAAGCTTGACCATCAACGACGAAGAAGAAGCCGCAGAGGAAGCAAGCGATGGTAAGAATTGTGATGAAGACGAATGGAGCGAACTCAAGGCACCAAAAATGGAGCTGAAACCACATCTGAAAGGGCTAAGATACGCGTTTCTCGGTCCTAATTCAACATATCCTGTCATAGTAAATGATGATGAAATTTCTCTTTTACTTTGTGAATTATGAAATTATAGAAAGGTTATAGGATATTCTCTAGACGACATCAAGGGTATATCCCCATTCTTATGCATGTATAGAATACATTTAGAAGATGAATCTAAGaattccattgaACCTCAAAGACGTTTAAATCCAAATTTGCGCGATGTCGTAAGAAAAGAAATTCTTAAACTTCTAAATGCAGGAATTATTTATCCTATATCCGATAGTACTCGGATTTCACCTGTTCATGTAGTTCCTAAAAAAGGTGGCATCACTGTGATAAAAAATAAAAGTGATGAATTAATCCTACTAGAACTATCACAGGACATTTGATATGTATGGATTTTAGAAAATTAAATGCTGCCACTAGAGAAGATCATTTTCCTCTTTCATTTATTGATCTAATGTTAGAACGATTAGCTAATCATTATCACTATTGTTTTTTGGATGGGTATTCGGGATTTTTTTAAAAATCCCGATACACTCGCATGATCAAGAAAAAATGACATTTATATGTCGTTACGGTACCTTTGCTTATCGAAAAATGTCGTTTGGACTATGTAATGCACCTGCAACCTTTTAGAGGTGTATGATGTCGATATTTTCAGACTTAATTGAATCACTAGTTGAGGTGTTTATGGATGATTTCTCTATGTATGGTTCTTCGTTTGGTGGTTGTTTTTCTAATTTGTTCAAGGTACTTAAACGTTGCGAAGAGATGAACCTCGTACTTAATTAGGAGAAATGTTATTTCATGGTGAAATAAAGAATCTTTCTTGGGTATAAAATTTCAGAAAGAGGAATCAAAGTTGACAAGGCTAAAATCAATGTCATGACAAGCTTAGGACATCCAAAAACAGTAAAAGACATATGAAGCTTCCTTGGTCACGCTGGGTTTTATAGAAGATTCATCAAAGATTTCTCAAAAATAGCAAGACCACTCACTAGATTGCTATGCAAGGAGGTAGATTTCGACTTTGATGATGCATGTCACGAAGCATTCCAATCAATCAAGAAGGAGCTGGTGAGTGCACCGATAGTACAACCGCCGGATTGGGAGTTACCGTTCGAGATAATGTGTGACGTTAGTGATTACGCTGTAGAAGCTGTGCTTGGACAACGCAAGGATAAGAAGCTGAATGTAATCTATTATGCGAGTAGAACGCTAGACGAGGCGCAAATGAGAATTATGCTACCACAGAAAAGGAGCTTTTAGCGATCATATTTACTTTTGAGAAGTTTCGGTAATACTTAGTCGGTTCTAAAGTCATCGTGCACACGGATCATGCGGTTCTACGGTAAGGATGCGAAACCAAGGCTACTCCGCTGGATACTACTCTTTTAAGAGTTCGATTTGGAGATAAAAGATAAGAAAGTAATAGAGAACGGACTAGCCGATCACCTGTCTCGAATGAGAATCACTGATGAGATCCCTATCTACGATTCACTACTGGAGGAGCAAGTCTATGCTATTAGAGTGCTTATCGGCGAGCACAATCTCAACAAGGAGCTGAAAAGCATCAATGCCATCAAGGACAAGTCACcatggtacgcTGACATCGTCAACTATCTCGCATGTGGAACCGCCCGTTTTTGTCGGATATCATAAGAAAAAGTTTTTAAAGAAGATAAACTGGTATTATTGGGACGACCCGAACCTTTACATATTATGTAAGGATAAGATATATAGAAGATGTGTTCTGGAACATGAAGTTCACGAAATTTTGACGGGATGCCACAGATCGACATACGGAGGATATTTTGCTACATTTAAGACGGTAGCTAAGGTTTTACAAGCTGGATATTGGTGGCCGACCTTATTCAGAGGCGCCCACCGCTTTTTTTATTTTGTGATGCATGTCAAAGAAAGGGAAACATAAGCCGGAGGAACGAGATGCCTCAAAACCCGATAATGGAGGTAGAAGTCTTTGACATGTGGGGCATCGATTTCATGGGACCTTTTCTAAACTCTCATGGTAACAACTACATCTAAATTGGTAGCAGTTGTGGCGTTTCCAACAAATGACGCAAATGTAGTTCTGAAACTTTTTAAGAGCATCATTTTCCCGCATTTCGGAGTTCTGTGAGTGGGGATTAGCCACGGAGGAACACACTTCATTAACAGAACTTTCGACAAACACCTAAGGAAGCATGGCGTTAGACATAAGGTGGCAACAACATATCATCCTCAAACAAGCGGACAAGTGGAGATTTCAAACCAGGAAATCAAAGAAATCTTGGAAAAGACGGTTAATATTTCATGAAAAAATTGGTCGCTTAAGCTAGACGATGCTTTGTGGGCTTACCGAACAGCTTTCAAGACTCTCATTGGTACCACTCCTTTCAACCTTCTGTATGGGAAATCTTTTCATTGACCGGTAGAGCTCGAGTATAACGTTATGTGGGCTGTGAAGATGCTGAATTATGATATCAAAACCGCTGCGAAAAAGCGCCTAATGGAGCTGAACGAATTAGACAAGATTCGTTTAAACGCCTATGAAAATGCACAGATATACAAGGAGAAGACTAAAGCATTCCATGACAAGAGGATACCTCGACGAGAGTTCAAGGAAAATGATCAAGTTCTATTATTCGACTCCCGTTTGAAGCTTTTTCTGGGAAAGCTTCGATC

Boechera stricta (v1.2)

ID:

Scaffold2021_LTR_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4338

Start:

913593  

End:

917930

Strand:

-

>Scaffold2021_LTR_83

ACATTGACCGTTCACCATGAAGCTTTCCCCATTATTCCCCCATAATTCTATAGCTCCGTAAGGGGTCACCGCCATTATCTTGAACGGTCCAGACCATCGAGAACAAAGTTTGCCTGGAAAAAACTATAATCGGGAGTTGTAAAGCAGGACTTTATCGTTTACCTTAAACTCCCGTTGAAGTATTCACTTGTCATGGAATCCTTTTGTCCTCTCTTTGTATATCCGGGCATTCTCATAGGCATCCACGCGAATCTCGTCTAGTTTCTTTAATTGCATGAGGTGCTTTTCAGCATCGGTTTTGATGTCGTAGTTCAGCATTTTGACAGCCCACATAGCTTTGTACTCGAGCTCCACCGGTAGGTGACAAGAttttccatacagaagattgaaaggagtcgtacctataggcgttttgaaagctgtccgataggcccacaaagcatcgtctagcttgagtgaccagtcctttcgtgaaatgttcaccgtcttctctaagattgctttgatTTCACGGTTAGAAACTTCCACTTGTCCACTTGTTTGAGGATGATATGGTGGCCACTTTATGTCTGACACAATGCTTTCGTAAGAGCTTATCGAAAGTtctgttgatgaAGTGTGTCCCTCCGTCGCTGATCACCATTCGCGGGATATCGAATCGTGGAAAGATGATGTGCTTAAAAAGTTTAAAAATTACCTTTGCGTCGTTTGTTGGACTTGCCATAGCTTCTACCCATTTAGATACGTAGTCCACTGCTACTATGATGTAATTGTTTCCATGTGAGTTTGGGAAAGGTCCCATAAAATCGATTCTCCATACATCGAAGACTTCTACTTCCATTATCGGATTTTGaggcatctcaTTCCTACGGCTTATGTTTCCTCTTCTTTGACATGCATCATAAGCTAGGATGAATTGATGAGCATCTTCGAACAAAGTCTGCCACCAAAATCCAGCTTGCAAAACTTTAGCCACCgtcttgaatgtAGCGAAATGTCCTCCGTATGTTGATCCATGGCATCACGTCAAGATCCTGTGAACTTCATGCTCAGGAACACATCTTCTGTATATTTTATCCTTACAAAGCGTGTAGAGGTTTTGATCATCCCAATAGCACCGATTGATCTCCATGAAAAACTTTTTCTTGTGATATCCGACGAGATCAGGTGGTTTTTCTCCGCAAGCGAGATAATTGACGATGTCGGCGTACTATGGTGACTTGTCCATGATGGCGTTGATGCTTTTCAGCTCCTTATTGAGGTTGTGTTCACCGAtaagtactctaATGGCATAGACTTGTTCCTCTGGTAGTGAATCGTCGATAAAGATCTCGTTAGTGATTCTCATTCGAGAAAGGTGATCAGCTACTCCATTCTCTATTCCTCtcttatcttttatctctaaatcgaactcttgaaggagtagtatccAGCGGAGTAGCCTTGGTTTTGCGTCCTTCTTAGCGAGTAGATACCTTAGTACCGTATGATCCGTGTGTACAATGACTTTAGAAccgactaagtaTTGGCGGAACTTCTCAAAAGCAAAGACGATCGCTAGAAACTCTTTCTCTGTAGTGGCATAATTCATTTGCGCTTCGTCTAGCGTCCTACTTGCATAAAAGATGACATTCAGCTTTCTGTATTTTCGTTGCCCAAGCACAGCTCCTACGGCATAGTcactagcatcaCACATAATCTCGAATGGTAACCCCCAATCTGGCGGCTGTACTATCGGTGCACTAACTAAATCCTTCTTGATTGATCGGAATGCTTCAAAACATGCATCATCGAAGTTGAACTTGACATCCTTGCATAGCAGGTTGGTGAGTGGTCTTGctatcttagaGAAATCCTTGATAAATCTTCGATAAAAATTAGCATTACCAAGAAAACTTCGTATGTCTTTCACCGTTTTTAGAGGCCCTAGACTTGTCATTACATCGATCTTAGCCTTGTCGACTTCAATTCCTCTTTCCGATATCTTATGCCCGAGAATGATTCCTTCTCTCACCATGAAATgacacttctccCAATTAAGTACTAGGTTTGTCTCTTCGCACCATTCAAGTACCTTGCACAAATTAGACAAACAACCACCAAACGAAGAATCATACACAGAGAAATCATCTATGAATACCTCAACTACTGATTCAATCAAGTCTGAAAatattgacatcATGCACCGTTGAAAAGTCGCAGGTGCATTACATAGTCCAAACGGCATTCTTCGATAGGCAAAGGTACCATAAAGACATGTAAATGTCATTTTTTCTTGATCTTGAGGATGTATCGGGAGTTGAATGAATCCCGACTACCCATCTAAAAAGCAATAGTGAGAATGATTTGTCAATCTCTCTAACATTTGATCAATAAACAGAAGAGGAAAATGATATTTTCTAGTGGCAGCATTTAATTTTCTGAAGACAATACACATCATATGTTCTGTGATAGTTCTAGTTGTAATTAATTCGTCATTTTTATTTTTTACTACAGTGATACCACCCTTTTTAGGTACAACATGAACAGGTGAGACCCAAGTACTATCTGATCTAGGATAATAATACCTGCGTCTAGAAGTTTAAGAATTTCTTTTCTTACGACATCACGTAAATTTGGATttaatcgcctTTGAGGTTCAATTGAATTCTTAGATTCATCTTCTAAATGTATTCTATGCGTGCATAAGGATGAAGATATGCCCTTGATATCATCTAGAGAATATCCTATTGCTTTTCTATATTttctcaattcaTCAAGTAAAAGAGAAATTTCATCATCATTAAGCTCATCACTTACTATGATAGGATATGTTGAATTAAGACCGAGAAATGCGTACCTTAACCCTTTCGGAGGTGGTTTCAACTCCACCTTCGGTGCCTTGAGTTCgctccaatcatCTTCATCGCAAGTCTTACCATCGCTTGCTTCCACTATGGCTTCTTCTTCCTCGTCACCTTCGATTAGACTCGCGTATGCCATCTCACGAGGTAGCATGTCGCCACGTCTCCATTTTGTAGCGTTTGGAATTCTTCACTTAATTCTTCGATTTCGAGCTCAACTTCGTCCAACACACCATCAGTCAATAAGTCGAGATCGTCTATGTAGAAGAtgcggtctcgtTCTTCGGGTTTCTTCATCACTTTGTCAATATTAAACTGCATAACTTCATCGTTAAGGTgaaggttaatCTTCCCATTCTTGACATCGATGATGGCTCCCGTAGTAGCTAGGAATGACCTTCCCAGGATAAGTGGATCCTTGGGTTCGTGATCCATTTTGAGTACTACAAAGTTTGTCGGTATTTGGTATTCACCAATCATTACTGGAATGTCTTCAAGCAATCCCACTAACATTTTAACTAAACGATCGGCGAGAACTAGTGACATCTTACACTCCTTGAACCGAATAAGTCCCAACTTTTGTTCAATGGATAGAGGCATTAGATTCACACTAGCTCCaagatcgcataAAGATCTCCCGAATGTTATGTGACCGAGAGTGCAGGAGAGAGTGAAACTGCTTGGGTCATCGAGCTTCCTTGGAATCTTCTTGTCGAGGATGATGGTATTGCACTCGTGTGTCAAGAAAGCCACTTCGGTTAGTTTTTTTTTCTTCTTAGTTACAAGATACTTGAGGAACTTGCTAGCGTTTGGAATCATCGTCAGGGCTTCTAGTATTGGCATAGTGATgatcacacctttcatttgttctcaaatgcattcctcattctctccgctattcttcccttaattcttcccggaaaagggattTTAGGTTGATATTTTGGGAGATCATGTGTCACTTGTTTCCTTACGCGAGTCTCAGGTCCCTATGTGGGAATGTCGGGCTCCCTATATTCGTCTGGCTTCTCCATGATTACCTCCTCGATTTCTGGTTCCTTCTCGAATATCTGGGGATTCTCTTTCTCGACTATTGGTTCTTCCCTCTCGATCATGATAGGGCCGTCTCCTTTTTCGATGTTATTTACTTCGCTTTTCTTGTTTATTGGCTGCTTAGGTGGAATCGGTCTGAGCTCTTTTCCACTCTTTATGGTTATTGCTTTGACTAACGGAGACTTTTCCTGCGTTCGTGTTTCTATATTTTAGACCTTAGAAGCAAGGTCTTTGAACTTCTCATCTAGCTTGTTCcactgttgactCATGATTGTAAACCCTTCACCGACCTTTGCTCCCTTGCTCGATTCTCCATCCAGAATGTTTTGAATTGCCTTCTTAAGTTCGCTTGTGCCGATTATTAAAGAACTCGTCCAACTGCTGTCTCCAGGGAAAGCATCGATTGCCCCTGGTCGATGGGGTTGATCGATGGTTCCCCCTG

Boechera stricta (v1.2)

ID:

Scaffold20332_LTR_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

177

Start:

65312  

End:

65488

Strand:

+

>Scaffold20332_LTR_84

GCAAACTTGAGAAGGCGATTCAGAACATTCTGGATGGAGAATCGAGCAAAGGAGAAAAGGTCAGTGAAGGGTTTACAATCATGAGTCAACACTAGAACAAGCTAGATGAGAAATTCGAAGACCTAGCCTCTAAGGTCTAGAATATAGAAACGCGAGCAAAGGAAGAGTCACCATTAG

Boechera stricta (v1.2)

ID:

Scaffold20332_LTR_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

3533

Start:

65737  

End:

69269

Strand:

+

>Scaffold20332_LTR_85

AAAGAACCCGAGACTCGCATAAGGAAACAAGTGAGACACGATCTCCCAAAGTATCAACCTAAAATCCTTTTTCTGGGAAGAATTAAGGGAAGAATAATGGAGAGAATGAGGAATGCATTTgaagaacaaaTGAAAGGTGTGATCATCACTATGTCGATACTAGAAGCCTTGACGATGATTCCCAACGCTAGAAAGTTCCTCAAGGATCTCGTGACTAAGATGAAAAAGGAACTAACTGAGGTGGCATTCTAGACACACGAGTGCAGTGTCGTCATCCTCGACAAGAAGATTCCAAGATTCCAAGAAGACGCCATCATCGATGTTAAAAATGGGAAGATTAACCTTCACCTAAAAGATGAAGGGATGCAGTTTAGTATCGATGAGGTGATGAAGAAACCCGAaaaacgagacCGTATTTTCTACATAGATGATCTCGATTTACTAGCTAATAGAGAATGGGACAAGGCTGAGCTCAAATACGAAGAATTAAGTGAAGAATTCCAAACACTACGGATGGAAGACATGGCGGACATGACTCCTCGTGAGATGGCGTATGCAAGTCTAACCGAAAATGATGAAGAAGAAGAATCCGCAATAGAGGAAAGCGGCGATGAGACTTGCAACGAAGACGATTGGAGAGAACTCAAGGCACCAAAAGTGGAGCTAAAACCACTCCCACAAGGGCTAAGGTACGTATTTCTTCGACAAAATTCAACATATCCTGTCATAATTAGtgatgagcttAATGATGATGAAACCACAATGTTATTAAATGGATTAAAAAAATATAGGAAGACTATAGGATATTCTCTAGATGATATAAAGGGAATATCCTCATCCTTATGCATGCATAGGATACATTTATAAGATGAATCTAAAAATTACATTGAACCTCAGGGGCGTTTAAATCCAAATTTGCGAGATGTAGTATGGAAAGAAATTATTAAACTTCTAGATGCAGGGGTTATTTATCCTATTTCAGATAGTACTTGGGTTTCACCTGTTCATGTAGTCCCTAAAAACGGTGGAATAACTGTAATAAAAAATGAAAATGATGAATTAGTCCCTATTAGAACTATTACAAGACATAGAATGTGTATCGATTTTAGAAAATTAAATGCTgccactagaaaAGATCACTTTCCTCTTCCGTTTATCGATCAAATGTTAGAACGATTAGCAAATCACTGTCACTATTGATTCTTAGATGGGTACTCGGGTTTCTTTCAAATTCTGATACATCCTCAAGATTTAGAAAAGACGACATTTACATGTCCTTATGGTTTCTTTGCTTACCGAAGAATGTCGTTtggattatgtaATGCACCTGCAACTTTTCAAAGGTGCATGATGTTAATATTTCAGACTTAATTGAATCAGTAGTTGAGGTATTTATGGATGAtttctctgtgtATGGTTCTTTGTTTGGTGGTTGTTTGTCTAATTTGTGCAAGGTGCTTGAACGGTGCGAAGAGACAAGCCTAGTACTTAATTAGGAAAAGTGTCATTTCATGGTGAGAGAAGAAATCGTTTTGGGACATAAGATATCGGAAAGAGGGattgaagtcgaCAAGGCCAAGATCGATGTGATGACGAGCCTAGGGCGTCCAAAAACGGTGAAAGACATACGAAGTTTCCATGGTCATGCTAATTTTTATCGAAGATTCATCAAGGATTTTTCTAAAATAGCAAGACTACTCACCAGCCTGCTATGCAAGGAtgtcgagttcAACTTCGATGACGCATGTTTTGAAGCATTCTGATCGATCAAGAAAGAGCTAGTTAGTGCACCGATAGTACAACCGCCAGATTGGGGGTTACCACTCGAGATTATTATGTGTGATGCTAGTGACTATGTCGTATGACTTGTGCTTGGACAACGAAAGGATAGAAAGCCGAATGTCATATATTATGCAAGTAGGATGCTAGACGAAGCGCAAATCAATTACGCCATTACGGAGAAAGAGCTTCTAGTGATCGTCTTTGCTTTTGAGAAGTTTTGCCAATACTtagtaggttctAAAGTCATTGTACACACGGATCATGCGGCGCTAAAATATCTACTTGCTAATAAGGATGCAAAACCGAGGCTGCTCCGCTGTATACTACGCCTCCAAGAGTTTGATTTGGAAATAAAAGACAAGAAAGGAATAGAGAACAGAGTGGCGGACCACCCTTCTCGGATGAGAATCGATAACGAAATCCCTATCAACGATCCATTACCAGAGGAATAAGTCTATGCAATTAGAGTACTTGTTGGCGAGCATAACCTGAATAAGAAGCTGAAAAGCATCAACGCCATCAAGAACAAGTCACCATGGTATGCCGACATAGTCAATTATCTAGCTTGTGGAGAAAAAACCACCTGATCTCGACGGATATCACAACAAAGAGGTTTTCAAGGAGATAAATGGGTATTATTGGGACGATCCAAACCTCTACACACTATGtaaggataaaaTATACAGAAGATGTGTTCCTGAGCATGAAGTTCGCGGAATCCTAATGGGATACCATGGATCTACATACGGAGGAAATTTGGCTACATTTAAGGCAGTAGCTAAGGTGTTGCAAGCTGGATTTTGgtggccgacttTGTTTCGAGATGCTCACCGATTCATCTTAGCTTGTGATGCATGTCAAAGAAATGGGAACATAAGCAGGAGGAATGAGAAGCCTCAAAATCCGATAATGGATGTAAAAGTCTTCGATGTATGGGGGATCGATTTTATGGGACCTTTCCCAAActcacatggaAACAACTACATCCTAGTAGCAGTGGATTATGTATCTAAATGGGTAGAAGCTGTGGCGAGTCCAATAAATGACGCAAAGGTAGTTCTTAAACTTTTTAAGAGCATCATTTTCCTACGATTCGGAATCCCACAAGTGGTGATTAGCGACGGAGGGACACACTTCATCAACAGAACTTTCGAtaagctcttacGAAAGCATGGTGTCAGACATAAAGTGGCGACACCATATCATCCTCAAAGAAGTGGACAAGTGGAAGTTTCCAGCCGTAAGATCAAAGCAATCTTAGAGAAGACGGTGAACATTTCACGAAAAGATTGGTCACTCAAGCTAGACGATGCTTTGTGGGCGTATCGAACAACTTTCAAACGCCTATAGGTAAGACTCCTTTCAATCTTCTCTatggaaaatctTGTCATTTACCGGTGGAGCTTGAGTATAAAGCTATGTGGGCCGTCAAGATGCTGAACTACGACATCAAAACCGCTGCTGAAAAGCGCGTAATGCAATTAAATGAACTAGATGAGATTCGCCTGGATGCCTATGAGAATGCCCGGATATAAAAAGAAAGGACAAAGGCATTCCATGACAAGCGAATACTTCAACGGGAATTTAAGGTAAACGATCAAGTCCTGcttttcaactcTCGATTAAAGTTTTTTCCAGAAAAACTTCGATCTCGTTGGTCCGGACCATTCAAGTTAAAAACGGTGGCGCCTTACGGAGCAATAGAATTATGGAGAAATAACGGGGAAGGCTTCACGGTGAACGGTCAATGT

Boechera stricta (v1.2)

ID:

Scaffold2066_LTR_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

147

Start:

5221  

End:

5367

Strand:

-

>Scaffold2066_LTR_86

CAAAACTGCATAATTTCGTTGTTTAGATGAAGATCGATTTTTCCATTTTTGACATGGATGATGGCTCCCGCTTTTGTTAGGAATGGTCTTCATAGGATGAGTGGATCCTTGGGCTCGTTATCCATCTTGAGTACTACAAAATCGGTT

Boechera stricta (v1.2)

ID:

Scaffold20910_LTR_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4231

Start:

192158  

End:

196388

Strand:

+

>Scaffold20910_LTR_87

CAGCAAAAAGACAAGTTTTTTTAACGACCAGGACGAGCAAACTTGAAGAGGTGATTCAAAACATTCTAAATAGGGAATCAAGTAAAGGTGCAAAGGTCAGCGAAGAATTCACAAACATTAAACAAAGATGGCGCGAACTAGATAAGAAGTCCGAGTATTAGAAACCCGAACTGTTGAGGAAGCACCAACAATCAATGCTATAACCTTGAAGAGTGGAAATGAGCTCAGACCGATCCCACTGAGGCAACCAATCAACAAAAAGAGggatgagactATCATCGAGAAAGAAAATCCGATCGTTGAGAGAGAGGATCCAATACTCGAGAAAGAAGATCCCATCGTAACCGAGGTGGAACAAGAGATTGAAGAAGTTATTAAGAAAAAATCAGACACGGATGGGGAACCTGATACTCGTGTGAGGAGCCAAACGATACCCGATCCACTTAAATatcaacctaagatcCCTTTTCCGGGAAGGATCAAAGGGAGGATAGCGGAGAGACTGAGGAATGCTTTTGAACAATATATGAAGGGTGTAATCATCACTATGCCGATACTAGAAGCTTTGAAGATGATTCCCAACGCTAGCAAATTCCTCAAGgatctcgtaaCTAAGAAGAAGAAGGAGCTCACCGAGGTTGCGTTCCTAACACATGAATGCAACGCGGTTATCCTCGAGAAAAAGATTCCAAAGAAATTGGACAATCCGGGCAGCTTCACTCTCTCTTGCAGTATATGTCCAATAACATTTGGGAGATCTCTATGTGatcttggagctAGTGTGAACCTCATGCCTCAGTCCATTGCATAAAATTTGGGATTCAATACATTCAAAGAATGTAGGATGTCACTCGTTCTCACCGATCGCTCGATAAAAACGCCAGTTGGATTACTCGAAGACATCCCGGTGATgattggtgacTACCAAATTCCAACCGACTTTGTGGTACTTAAGATGGATCACCAGCCTAAAGATCTATTCATCCTAGGGAGACCATTCCTAACAACTGCGAGAGCCATCATCGATGTTAAAAACAGAAAAATCGACCTTCACCTAAACgacgaagtaaTGCAGTTTAGTATCAATGAGGTGATGAAAAAACCCGAGAAACGAGATTGTATCTTCTTCATAGATGATCTCTACTTGTTGGCTGATGGTGTGTTggatgaagatgAGCTCGAAAACGAAGAGCTAAGAGAGGAATTCCAAACGCTACCAAATGGAGACATGGCGGACATGATACCTCGTGAGATGGCTTACgcgagcctaaCCGAAGGTGACGAAGAAGAAGAAGCCACAAAGGAAGCAAGCGATGGTAAGACTTGTGATGAGGATGATTGGAGCGAACTCAAAGCACCGAAAGTGGAGTTGAAACCACTTCCGAAAGGGTTAAGGTACGCATTTCTAGGGCCAaattcaacataTCCTGTCATAATAAGTGATGAGCGTAATAATGATGAAATTTCCCTTTTACTTTGTGAATTGAGAAAATATAGAAAAGCAATAGGAtattccctagatgatatcaaaggcatatgcccctccttatgcatgcatagaatacatttagaggataaatctaagaattctattgaacctcaaaaacgtttaaatccaaatttgcgtgatgtcgtaagaaaagaaattcttaaacttctagatgcaggtattatttatcctatatcaGATAGTACTTGGGTCTCACCTGTTCATGTTGTGCCTAAAAAAGGTGGTATTACTGTGATAAAAAATAAAAATGACGAACTAGTTCCTACTAGAACTATCACCGGGCATAAGATGTGTATTGATTTTAGAAAATTAAATGCTGCCACTAGAAAATATCACTTTCCTCTTCCGTTCATTGATCAAATGTTAGAAAGATTAGCAAATCACTCTCACTGTTGTTTTTTAGATGGGTATTCATGATTCTGTCAAATCCCAATACATCCTCATGATCAAGAAAAAATGACATTTACATGTCCTTACGGTACCTTTGCTTATCGaagaatgccgtttggattatgTAATGCACCCGCGACTTTTCAACGGTGTATGATGTCGATATTTTCAGATTGAATTGAATCAGTAGTTGAGGTGTTTATGTATGATTTCTCTGTGTATGGTTCTTCGTTTggtggttgtttGTCTAATTTGTGCAAGGTACTCGAACGATACAAAGAGACAAACCTCGTACTTAATTGGGAAAAGTATCATTTCATGGTGAGAGAAGGAATCGTTCTTGGGCATAAGATATCGGAAAGAGGGATTGAAGTCGAcaaagccaagaTTGATGTGATGACAAGCCTAGGGCCTCTAAAAACGGTGAAAGACATACGGAGTTTTCTAGGTCATGAGGGATTTTACCGAAGATTCATCaaagacttctcAAAAATAGTAAGACCGCTCACGAGATTTCTATGCAAAGAGGTGAACTTCGACTTTGATGACGCATGTCACGAAGCATTtcaatccatcaagaaggagttagtaagcgcaccAATAGTACAACCACCGGATTGGGGATTACCGTTCGAGATCATGTGTGATGATATCGATTATGCGGTAGGAGCTGTGCTTGGATAACGTAAAGATAAAAAGCTGAACGTCATCTATTACGCGAGTAGGACGCTAGACGAAGCGCAAATAAATTACGCCACTACGGAGAAAGAACTTctagcaatcgtCTTTGCTTTTGAGAAGTTCCGCCAATACTTGGTCGGTTTTAAAGTTATTATACATACGGATCATGCAGCCCTAAGGTACCTACTTATGAAGAAAGATGCAAAGCCAAGACTACTCCACTGGATATTACTCCTACAAGAGTTCAATTTAGAGATAAAATACAAGAAAGGAATAGAGAACGGAGTAGCTGATCACTTTTCTCGAATGAGGATCACTAACGAGATTCCTATTAACGAATCACTACCGGAAGAGCAAGTCTATGCCATTagagttcttgttggcaagcacaaactcaacaaggagctgagaagcatcaacgccgtcaaggacaagtcaccatggtatgCTGACATCGTCAACTATCTCGCATGTGGGGAGAAGCCGCCCGATCTCATCAGATACCATGAGAAAAAGTTTTACAAGGAGATAAACCGATATTATTGGGATGATCCGAACCTCTACatgctatgcaaGGATAAGATATATAGAAGATGTGTTCCGGAAAATAAAGTTCACGGGATTTTAACGGGGTGCCATTGATCGACATACGGAGGACATTTCGTTACATTCAAGACGGTGACTAAAGTTCTACAAGCTGGGTTTTCTGTGGCCAACTTTATTTAGAGACACTCACTGATTTATTCTCGCTTGTGACGCATGTCAAAGGAAAGGAAACATAAGCCAGAGAAACGAGATGcctcaaaacccgataatggaagtagaagtcttcgacgtatggggaatCGATTTCATGGGACCATTCCCTAACTCTCACGGTAATAACTACATTCTCGTGGCTGTGGATCACGTATCTAAATAGGTAGAAGCAGTAGCATGTCCAACAAATGACGCGAAGGTGGTCCTAAAACTTTTTAAGAGCATCAAATTTCTCGCGATTTGGAGTTCCGAGAGTGGTAATTAGCGACGGAGGAACACACTTCATTAACAGAACCTTTGATAAACTCCTACAGAAGAATGGCGTGAGATACAAAGTGGCAACCCCATATCACCCTCAAACAAGCGGACAAGTGGAAGTCTCGAACTGAGAAATCAAAGCAATCTTGGAGAAAacggtgaatgtTTCAAGGAAGGATTGATCGCTTAAGCTAGACGATGCTTTATGGGCTTATCGAACAACATTCAAGACTCCCATAGGTACGACTCCTTTCAACCTTCTctatgggaagTCATGTCATTTGCCAGTAGAGATCGAGTATAAAGCTATCTGGGCTGTCAAGATGCTAAACTACGACATCAAAACCCCGGCGGAGAAACAACTCATGCAACTGAACGAGCGAGACGAAATTCTCCTAGATGCTTATGAGAATGCCCGCATATACAAGGAAAAGACTAAGACATTTCACGACAAGAGAATACTTCGacgcgagttcaAGGAAAACGATCAAGTCTTACTATTTAACTCCCGTTTGAAGTCCCAGGAAAGCTACGATCTCGTTGGCATGGACCTTTCAAGATAAAGTCGgtgacaccttatggagctatagaactatgagataaaaatggaaaaagtttcaaggtgaacgggca

Boechera stricta (v1.2)

ID:

Scaffold20968_LTR_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1856

Start:

74905  

End:

76760

Strand:

+

>Scaffold20968_LTR_88

CCAATCGAGGAAGTGATTACGGAAAAAGAGGACAAGGATAGGGAGCCCAACATTCGTACAATCTCTTTTCCAGGAAGAATTAAAGGAAGAATAGCAGAAAGAATGAGGAACGCATTTGAAGATTAGATGAAAGGTGTAATCATCACTAGGCCAATACTAGAAGTTTTGACGATGATTCCCAACGCTAATAAGTTCCTCAAGGATCTCGTGACTAAGAAGAAAAAGGAATTAACCGAGGTAGCATTCCTAACGCACGAGTGCAGCATCGTCATCCTGGACAAAAAGATTCCAAAGAAATTAGACGATCCAGGTAGTTTTAGTCTTTCATGCACTCTCAGTCAAATAACATTCAGGTGATCTCTGTGCGATCTCGGAGCTAGTGTGAATCTTATGCCTCTATCCATTGCACAAAAATTGGGGCTTACTCGATTTAAAGAGTGTAAGATGTCGCTAGTTCTCGCCGATCGCTCGATAAAAACACCGGTGGGACTATTAGAAGACATTCCGGTAATGATTGGTGATTATCAAATACCGACTGATTTTATGGTACTCAAGATGGATCCCGAGCCCAAAGATCCACTCATCCTAGGGAgaccattcctaGCAACCGCGGGAGCCATCATCGATGTTAAGCACGGAAAGATCGACCTTCACCTAAAGATCGAGATCGTATCTTCTACATAGACGATCTCGACTTGCTAAATGATGGTATATTAGACGAGGTTTAACTCAACAACGAGGAGCTAAGTGGAGAGTTTCAAATGCTACAAAATGGAGAAGTAGCGGACATGATACCTCGTGAGATGGTTTATGCAAGTTTAACCGAAAATAACGAAGAAGAAGAAGCCACAGAGGAAGAAAGCAATGGTGAGACTTGCGATGTAGACCACTACCGAAAGGGCTAAGGTACGCATTTCTAGGACCAAACTCAACATATCCTATCATAATAAGTGATGAACTAAATGACGATAAAATCTCAATGCTGCTTAATGAATTAAAAAATATATAAGAAAGCTATAGGATATTCTTTAGATGATATCAAGGGAATATCCCCATCCTTATGCATgcatagaatacATCTAGAAGATGAATCTAAAAATTCCACTGAACCTCAAAGACGTTTAAATCCAAACTTGCGAGATGTATTACGGAAAGAGATTCTTAAACTTCTAGATGCAGGTGTTATTTATCATATTTCATATAGTACCTGGGTTTCACCTGTTCATGTTGTACCTAAAAAAGGGATATCACTATGATAAAAAACGAAAATGACGAATTGATTCCTACTAGAACCATCACCGGACATAGGATGTGCATTGATTTTAGAAAATTAAATGCAGCCACTAGAAAATATCATTTTCCTcttccgtttatTGATCAAATGTTAGAACGATTAGCGAATCATTCTCACTATTGATTTTTAGATGGGTATTCGGGATTCTTTCAAATCCCGATACATCCTCAAGATCAAGAAAAGACGACATTTACATGTCCTTGCGGTACCTTCGCTTATAGAAGAATGTCATTTGGATTATGTAATGCACCTGCAACTTttcaaagatgTATGATGTCGATATTTTCAGACTTAATTGAATCAATAGTTGAAGTGTTTATGGATGATTTCTCCGTATATGGTTCTTCATTTGGTAGTTGTTTGTCTAATTTTTGTGCAAGGTACTTGAACGATGCAAAGAGACGAATCTCGTACTTAATTGGGAGAAGTTTCATTTTATGGTAAGAGGGGGAATCGTTCTTGGGCATAAGATATCAGAAAGGAGGATTGAAGTTGACAAAGCCAAGTTCGATGTGATGACAAGTTAAGGACCTCCAAAAATGGTGAAAGATATACGGAGTTT

Boechera stricta (v1.2)

ID:

Scaffold20968_LTR_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

827

Start:

87800  

End:

88626

Strand:

+

>Scaffold20968_LTR_89

AGTTTCCTTGGTCATGCTGGGTTTTATCGAAGGTTCATCAAGGATTTTTCTAAGATAGCGAGACCATTCACCAGCCTACTATGCAAAGATGTCAAGTTCAATTTCGATGACGCATGTTTTGACGCATTGCGATCGATCAAGAAAGAGCTAGTGAGTGCACCGATAGTACAATCGCCGGATTGGGAGTTGCCGTTCGAGATTATGTGCGATGCTAGTGAATATGCCGTAGGAGCTGTGCTTGGACAGCGCAAAGATAAAAAGCTGAATGTCATCTATTATGCAAGTAGAACCCTAGACGAAGCACAAATGAATTAcgccactatgaaaaagagcatctagcgatcgtcttcgcttttgagaagttctgccaatacttagtcggttgtaaagtcattgtgcatacggatcatgcggcactaaggtatctactcgctaaaacggctgcgaaaccacgtctactccgctggaaactaCTCCTTCAAGAGTTTGACTTGGAAATAAAAGACAAGAAAGGAATAGAGAATGGAGTAGCGGATCACCTTTCTCGGATGAGAATCACTGACGATATCCCTAGTAACAATTCACTACTAGAGGAAAAAGTCTATACTATCAAAGTACTTGTTGGCGAACACATCCTCAACAAGAAGCTGACAAGCATCAACGCTATCAAAGACAAAGACAAGTCACCATGGTACGCCGACATCATCAACTATCTTGCTTGTGAAGAAAAACCACTTGATCTCGTCAGATATCACAAGAAAAAGTTTTTAAAGGAGATAAATCGATATTTTTGGGATAATCCGAACCTTTACATGCTATGTAAAGAT

Boechera stricta (v1.2)

ID:

Scaffold20968_LTR_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1872

Start:

119985  

End:

121856

Strand:

+

>Scaffold20968_LTR_90

CCAACATATAGAAACCCGAACGAAGGAAGAAACACCAACAATCAAAGCAATAATTCTAAAGAGTGGAAAGGAGCTTAGACCGATTCCGCCTAAGCAACCAGTAAACAAGAAAATTGAGGAGTCTAACATTGAGGAAAAGGACGATGCTATCATGATCGAGAGGGAGGAACCAATCATCGAGAAGGgaaatcccatGATATTCGAGAAAGAACCAGAAGTCGAGGAAGTCATCACAGAGAAGCTATACGAGGATAAGGAGCCCGACATTCACACAAATGAACCTGAGACtcgcgtaaggaAACAAGTGACACACAATCTTCCAAAGTACCAACTTAAAATCCCTTTTCCGAGAAAAATTAAGGGAAGAATAGCGGAGAGAATGAGGAACGCGTTTGAAGAGCAAATGAAAGGTGTAATCATCACCATGCCGATACTAGAAGCCTTGACGATGATTCCCAACGTTAGAAAGTTCCTCAAGGACCTCGTGACTAAGAAGAAGAAGGAGCTCACCGAGGTggcgttcttgacacacgagtgcagtgccatcatcctcgacaAGAAGATTCCAAGAAAGCTAGATGACCTAGGCAGTTTCACTCTCTCTTGCTCTCTCGGTCACATAACATTCGGGAGATCTTTATGCGATCTTGGAGCAAGTGTGAATCTAATGCCCCTATCCATTGCAcaaaagttggGACTTACTCGATTCAAGGAGTGTAAGATGTTATTAGTTCTCGCTGATCGTTCGATAAAAACGCCGGTGGGATTACTTGAAGACATTCCGGTGATGATTGATGACTACCAAATTCTGACCGACTTTGTGGTACTCAAGATGGATCACGAGCccaaagatccactcatcctagggagactattcctagcaactgcgggagccatcattgatgtcaaaaatagaaaaatcgaccttcatctaaacaatgaagttatgcagtttagtattgACGAAGTGATGAAGAAACCCGAAGAACGAGACCACATCTTCTACATAGACGATCTCGACTTGTTGACTGATGATGTGTTGGATGAAGTTGAGTTCGAAAACGAAGAACTAAGTGAAGAATTCCAAAATCTACAAAATGGAGACGTGGCGGACAtgatacctcgTGAGATGGCTTACGCGAGTCTAACCAAAGGTGACAAAGATGAAGAAGCCACAGAGGAAGCAAGCGATGGTAAGACTTGCGATGCAGACGATTGGAGCGAACTCAaagcaccgaaaGTGGAGTTGAAACCACTTCCAAAAGGGCTAAGGTATGCATATCTCGGTCCTAATTCAACATGTCCTGTCATAGTAAGTGATGAGCTTAATAATGATGAAATTTATCTTTTACTTAATGAATTGAGAAAATATAGAAAAGCAATAGGACATTCGCTAGATGATGATATCAAGGGCATATCCCCATCCTTATGCATGCACTGAATACATTTAGAAGATGAGTATAAAAATTCCATTGAACCTCAGAGGCGCTTAAACCTAAATTTATGTGATGTTGTAAGAAAACGAAATTCTTAAACTTCTAGATGTAGGAATTATTTATCCTATATCCGATAGtaattgggtatCACCTGTTCATGTAGTTCCTAAAAAGGTGGTATCACTTTGGCAAAAAATGCAAATGACGAATTAATTCTTATTAGAACTATCACGAGACATAGGATGTGTATTGATTTTAggaaattaaaTGCTGCTACTAGAAAAGATCATTTTCCTATTTCATTTATTGATTAGATGTTAGAACGATTAGCAAATCACTCTCactattgtttTTTAGATGGGTATTCAGGATTCTTTCAAATTCCGATACACCCGCAAGATCAAGAAAAAACGACATTTACATGTCCTTATGGTAC

Boechera stricta (v1.2)

ID:

Scaffold20968_LTR_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

516

Start:

135196  

End:

135711

Strand:

+

>Scaffold20968_LTR_91

GGTACCTTCGCTTACCGAAGAATGTCGTTtggattatgtaATGCACCTGCAACTTTTCAACGATGCATGATGTCAATATTTTTAGACTTAATTGAATCAGTAGTTAAGGTATTTATGGATGATTTCTCTGTGTATGGTTCTTCGTTTGgtggttgtttGTCTAATTTGTGCAAGGTACTTGAACGGTGCGAAGAGACAAATCTTGTACTGAATTGGGAAAAGTGTCATTTCATGGTGAGAGAAGGAATCGTTCTCGGACAtaagatatcggaaagagggattgaagtcgacaaggccaagattgatgtgatgacaagtttagggcctccaaaaatggtgaaagacatacgaagtttccttggtcatgctaatttttatcgaagattcatcaAAGATTTTTTTAAGATAGCAAGACCACTCACCAGCCTGCTATGCAAGGATATCGAGTTCAACTTCGATGACGCATGTTTCGAAGCATTCCAATCGATCAAGAAAGAGCTTGTGAGTACACGGATA

Boechera stricta (v1.2)

ID:

Scaffold21554_LTR_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1030

Start:

135794  

End:

136823

Strand:

-

>Scaffold21554_LTR_92

AGAAGCATGAGGTTCACACTAGCTCCAAGATCACATAAAGATTTCCCAAATGTTATCAGACCTATATTGCAAGAGATAGTAAAGCTACCTGGATCGTCTAATTTCTTCGGAATTTTCTTGTCAAGAATAACCGCGCTACACTCGTGTGTTAGGAATGCTACCTTGGTGAGCTCATTCTTCTTCTTAATCACGAGATCTTTGAGGAATTTTCTAGCGTTAGGAATCATCGTCAAAGCTTCTAGCATCGACATAGTGATGATTACACCTTTCAtttgctgttcAAATGCATTCCTCATTCTCTCCGCTATTCTACCTTTGATCCTTCCCACAAAAAGAATCTTAGGCTGATAATTGTGTACGTCGAGTGTCacctgactccTTCCACGAGTATTAGGCTCTTTATCCTTATATGGTTTCTCCTTGATAGCTTCCTCAATCTCGGGTTCTTTCTCGAATATCATGGGATTTCCTTTCTCGATGATTGGTTCCTCCCTCTCGATCATGATAGGATTGTCTTTTTTCTCAATGTTAGACTCCTCAATTTTCTTGTTTACAGGCTGCTTTGGCGGAATCGGTCTGAACTCCTTTCCACTCTTTAAAGTTATTGCTTTGATTGTTGGTGTTTTTCCCTTCGTTCGGGTTTCTATGTGTTGGACCTTAGAAACCAAATCCTCGAACCTCTCGTCTAACTTGTTCCAACGTTGAtccatattcgtAAACTCTTTACCGACCCTCACAACTCTACTTGTTTTTCCATCAAGAATGTTCTGAATAGCCTTCTTGATTTCACTTGTCTCGGTCGTTAAGGGACACGTCTCCttgtcgccccCAGGAAGAGCATCGATTGCTCTAGGTCGATGGGCTTGATCGATGGCTTCCCCTATCATGGCATCGATGGTGTAAGGTCGATGCTCTGTTTGATGTACTCTCTCTTCCTTCACAGAAAACGTCGATGGTGGATGGTCGATGCTGTCCGTCAGCTggtgttctggAGGTACTGGCATCGACCGAGTGGGGTCGATGCTGCTGT

Boechera stricta (v1.2)

ID:

Scaffold21554_LTR_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2555

Start:

153783  

End:

156337

Strand:

+

>Scaffold21554_LTR_93

caacatcgatCAAGAGAGATTGATGCTTTTTCAGATGGAAACATTGAGCAACATCATCGACCAGGAGCGGTCGATGGTATTGCTGGGACTATCAAAGAGAGAGAGCGTCAAACGGAACATCGGTCATATACCATCGATGTTATGTCTATAGAAACTGTCAAACAAACCCATCGATCCAGTCCGATCGATACTTTTCCTGGGGGCAGCAAAGAGATAACGACCGGGATGAACAAACTTGAAGAGGTGATTCAAAACATTCTAGATGGGGATTCAAGCAAAGGTGCAAAGGTCAGCGAAGAATTCACAAATATTgaacaaagatGGCGCGAACTAGATAAGAAGTTCGAGGATTTGGTTTCTAAAGTCCAAGTATTAGAAATCCGAACTATTGAGGAAGCACCGACGATCAATGCTATAACCTTGAAGAGTGGAAAGGAGCTcagaccgatcccaccgaggCAACCAATCAATAAAAAGAGGGATGAGACTATCATCGAGAAAGAAAATCCATTCATTGAGAGGGAGGATCCAATACTCGAGAAAGAAGATCCCGTGACCGAGGAAGAACAAGAGATCGAAGAAGTTATTAAGGAAAGATCAGAAACGGATGGGGAACCTGATACTCGTGTGAGGAGCCAAGCGATACCCGATCCACTTAAATATcaacctaagatcccttttccgggaaggatcaaagggaggatagcggagaaactgaggaATGCATTTGAACAACAAATGAAGGGCGTAATCATCACTATGCCGATACTACGATGATTCCCAATGCTAGCAAATTCCTCAAGGATTTCGTAACTAAGAAGAAGAAGGAGCTCACCGAGGTTTCGTTCCTAACACATGAGTGCAGCGCAGTTATTCTTGACAAAAAGATTCCAAAGAAATTGGACGATCCGGGCAGCTTCACTCTCTCttgcagtataggtccaataacatttgggagatctctatgtgatcttggAGCTAGTGTGAACCTCATGCCTCAGTCCATTGCACAAAAGTTGGGATTCACTACATTCAATGAGTGTATGATGTCACTCGTTCTCGCCGATCGCTCGATATAAACACCGGTTGGATTACTCAAAGACATCCCGGTGATGATTGGTGACTACCAAATTCCAACCGACTTTGTGgtactcaagatggatcaccagcccaaagatccactcatcctatggAGACCATTCCTAGCAACCGCGGGAGCCATCATCGATGTTAAAAACGGAAAAATTGACCTTCACCTAAACAAAGAGGTGACGAAAAAACCCAAAAAACGAGACCGCATCTTCTACATAGACGATCTCGACTTGTTGGATGATGGTgtgttggatgaagttgagctcgaaaacgaagaactaaatgaagaattccaaacgctacaaaatggagacgtggcggacatgctacctcgtgagatggcatacgcgagtctaatcgaaggtgacgaagaagaagaaGCCACGGTGGAAGCAAGCGATGGAAAGACTTGCGATGAAGATGATTGGAGTGAACTCAAGGCACCGAAGGTGGAGTTGAAACCACTTTTGAAAGGGCTAAGGTACACATTTCTTGGTCCTAATTCAACATATCATGTCATAGTAAGTGATGAGCTTAATGATGATGAAATTTCTCTTTTACTTAatgaattgagaaaatatagaaaagcaataggatattctctagatgatatcaagggcatattcccattcttatgcatgcATAGAATACATTTAGAAGATGAGTCTAAGAATTCTATTGAATCTCAGAGGCGTTTAAATCCAAATTTGCGTGATGTCGCAGGAAAAAAATTCTTAAACTTCTAGATGCAGGTATTATTTATCCTATATCCGATAGTAATTGGGTATCACCTGTTAATGTAGTTCCTAAAAAGGGTGGTATCATTGTGGTAAAAAAATGAAAATGACGAATTAATTCCTACTAgaactatcacgGGACATAGGATGTATATTGATTTTAGGAAATTAAATGCTGCCACTAAAAAAGATCATTTTCCTCTTCCGTTTACTGATCAGATGTTAGAGCGATTAGCAAATCACTTTCATTATTGCTTTTTCGATGGGTACACAGGATTCTTTCAAATCCGGATACATCCTCAAGATCAAGAAAAAACGACATTTACATGTCCTTACGGTACctttacctatcgaagaatgccgtttggactatgtaatgcacctgcaacctttcaaaggtgtatgatatcgatattttcagatttAATTGAATCAGTAGTTGAGGTGTTTATGGATGATTTCTCTGTGTATGGTTTTTCGTTTGGTGGTTGTTTGTCTAATTTGTGTAAGGTACTAAAACGTTGCAAAGAGATGAACCTCGTACTTAATTGGGAGAAGTGTCATTTCATGGTGAGAgaaggaatcattctcggacataagatatcgaaaagAGGGATTGAAGTCGACAAGGCCAAGATCGATGTAATGACAAGTCTAGGGCATCCAAAAAAGGTGATAGAAATACGAAGTTTCCTTGGTCATGCTAATTTTTTTCGAAGATTCATC

Boechera stricta (v1.2)

ID:

Scaffold21942_LTR_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2948

Start:

33196  

End:

36143

Strand:

-

>Scaffold21942_LTR_94

TGTCAGTTAACCGAGAACTCTCCCCCGGTCTTGTTCCATAAAACGATGGCCCCATATGGTTTAACTTCCTTAATGACGAAAGGACCCGAGCATCTTGACTTTAGCTTTCCCGGGAATAGTCGCAAACGAGAGTTGAAAGGCAAGACTTGATCTCCTTCTTTTAATTCCCGCTTTAGGATCTTCTTGTCATGAAATGCTTTAGTTCTCTCTTTATAAATCTTTGAGTTTTCATAAGAATCTAGCCTCAGCTCCTCAAGCTCTTCCAATTGTATCAAACGCTTCTCCGAAGAGGTCTTCAAGTCGAAGTTCAATAATTTGGTGGCCCAAAGCGCTTTGTATTCAAGTTCCACCGGGAGGTGACAAGACTTCCCATAAAGTAAGTTGAAAGGAGttgtacctatGGGTGTCTTGTAAGCGGTTCTATATGCCCATAAAACATCATCAAGCTTTGCTGCCCAATCTTTCTTTGATTTCCCAACTGTTTTTTCGAGAATGGCCTTGATTTGCCGGTTTGAGACTTCAACTTGGCCAGAAGTTTGGGGATGGTAAGGTGTATCTACCTTGTGTTTCACTCCATGCTTCTTTAGAAAAATCTCAAAGACCTTGTTGATGAAGTGAGATCCTCCATCGCTTATCACAATTCTTGGTACTCCAAACTTTGGGAATATGATCGTTTTGATCATCTTCAAGACCACCTTAGCATCATTGGTAGGACTAGCTAGGGCTTCCAcccattttgacaCATAATCCACCGCTACCAATATATATTGATTGCCATAAGATGAAGGGAAATGTCCCATGAAGTCAATACCCCAAATGTCAAAGATCTCAACTTCTAGAATAAAATTTtgaggcatctcATTCCTTTTGCTTATGTTCCCTTTTCTTTGAAAAGGATCACACTTTGATATGAATTCTTGAGCATCTTTAAAAATTGTTGGCCACCAAAAACCAGCTTGCATGACTTTTTGCACCGTCTTAAAAGTAGCTAAATGACCTCCGTAATTTGAACCATGGCAATGGAATAAGATCCCACTCGCTTCTTCTTCGGCCACACATTTTCAAAAAAGGTTATCTTTGCAACGCCTATAGAGATATGGTTGATCCCAAAAGTAGTGATTGACATCTTTGTAGAATTTTTTCTTCTCATCCTCTTTTAAATTAGTAGGCTCTCTTCCACATGCTAAATAGTTGACCAAATCGGCATACCAAGGGAGATGGTTATGAATCTCTTTCTCAACATAAAGTTGCTCCTCCACAATCTTATCTAGCTCAAATGTGGCCTTGTGAACCGTTTCGACATTGTAGATACAATCTTCGGGCATAGAATCATTAATAGCCAAATCTTCATCAATCCTCAACCTTGATAGATGATCCGCAACCCCGTTCTCAATTCCCTTCTTGtcttttatctcTAGATCAAATTCTTGAAGCAAGAGGATCCATCTAAGCAATCTTGGTTTAGCGTCTTTCTTAGCTAATAAATGTTTCAAAGCAGCATGATCCGTGTGTACTATGACCTTGGATCCTACCAAATAAAATCTAAACTTCTCAAAGGCATAGACTATGGCAAGAAGTTCTTTCTCCGTTGTTGCATACTTTACCTGAGCATCATCCATTGTCCTACTTGCATAGTAGATGACATGAAGTTTCTTTTCATTTctttgccccaaAACAGCTCCAACGGCATAATCGATTGCATCACACATAACTTCAAATGGTAAGTCCCAATCCGGTGGTTGGACAATGGGAGCACTTACCAATGTTTCTTTTAACTTCAAAAATGCTTCATAGCAAGCTTCATCAAAGAAAAATTTGGTATCCTTGCACAAGAGACGTGTCAAAGGCCTAGCAATGCTAGAGAAATCCTTAATAAATCTTCTATAAAACCCCGCATGACCCAAAAAGCTTATTATTCCTCTAACCGTGTTTGGAGGAGACAAGTTGACCATCACATCAATTTTCGCTTTATCAACCTCAATTTCGTTTTTAGAAATCTTATGTTCCAAAACAATCCCTTCTTTGACCATGAAATGACATTTTTCCCAGTTGAGAACCAAGCTTGTGTCTTCATATCATTTTAGTATCCTACACAAATTAGAAAGACACAAAGAAAACGAGGCaccatatacgGAAAAATCATCCATAAACACTTCCATTATATTCTCAGTTAAATCAGAGAAGATCGACATCATGCACCTTTgaaatgttgctGGTGCATTACATAATCCAAATGGCACCCTTCGATATGCGAAGGTACCATAAGGACATGTAAATGTCgtcttctcttgGTCTTGAGGATGAATTGGGATTTGAAAGAATCCCGAATATCCATCAAGAAAACAATAGTAAGAGTGATTTGCCAATCTTTCAAGCATTTGATCAATGAAAGGGAGAGGAAAATTATCTTTTCTAGTAGATGCATTTAGTTTTCGGTAATCTATGCACATCCTATGACCCGTGATCGTTCTTGTTGGGATCAATTCATCTTTATCATTTTTAATTACCGTTACTCCTCTTTTTTTAGGAACTACATGAACTGGGGAAATCCAAGTGCTATCAGAGATTGAATAAATAACCCCCGCTTCAAGTAGTTTCAAGATTTCTTTTTTAACCACTTCTTTTAAGTTTGGATTTAGTCTTCGTTGATGTTCAATTGAAGATTTGGACTCATCTTCCAAATAAATTCTATGCATGCATAATGATGGTGAAAGACCTCTaatatcatccAATGAATAACCTAAAGCCTTTCTATATTTTTTCAGCTCATGCAATAGCAATTCCATCTCATCATCATTCAAAGCATCATTAACAATTATCAGATAAGTGGAGTTAGGGCCTAAAAATGCATACCTTAGCCCCTTGGGAAGAGGTTTAAGTTCCACATGTGGTGCCTTAAGCTCGctccaatcctCATCCATGCTAGTCTTACCATTGCTAGTTTCTTC

Boechera stricta (v1.2)

ID:

Scaffold22157_LTR_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

254

Start:

29403  

End:

29656

Strand:

+

>Scaffold22157_LTR_95

GCTAGTATAAATAGTGTTGCTTCCACACCATGGTTCACTAGCTTGGTTAAGGAATCACTATGAAGAATGAGAGATATAGGTCTTTCTGCAAAAACACACACGCGTGCGCGCCGCCGCTGCCGTGTTGGGTTGGGCTTGGGGAATGTCGGCCTTTAAGCCCACAAAGATGTTTTTTTGGACCAAATATCTATTGGACTTTTGGACCAATTTCCCTACATTTTTTGTATAATATATAGTTTAAAAACTATATAATA

Boechera stricta (v1.2)

ID:

Scaffold22157_LTR_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

241

Start:

615885  

End:

616125

Strand:

+

>Scaffold22157_LTR_96

ctagtataaatagtgttgcttcctcaccatggttcactagcttggtcaaggggtcactatggaaaatgagagatatgggccattatgcaaaaacacacacacgcgcgcgcaccgccgccgagcctggccgggtcttgggtctcggggaaaggcccacaaagattgttctttttggacaaaatttctagtagaattttggaccaaattccctacatttttgcataaaaactatataataaaa

Boechera stricta (v1.2)

ID:

Scaffold22157_LTR_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

721

Start:

617075  

End:

617795

Strand:

+

>Scaffold22157_LTR_97

TCTCTGTAAAATACTGACTTAACTGTCTTTCCTATGTACAGATGACAAACGAACATGAGCTCGCAGGTAACACTAACGGTGCTGCAATCGAAACCGGTGAGTCGACACCCCATCTTGGGAGAGGTCTGCCACTCGGTCAGGCACCAGCCGAGGTTCCTAAAGTCCCAGCTATGCCGAGCACAGTCTTCGCTGGTTTACAACCAGGGAAATTTGATGGGTCCaatttcaagtcgtggcaGAAAAAGATGCATTTCTTTCTCCACAATTTGAACTTGTCAAGATATCTCACTGAGGTCAAACCTATATTGCCTCAAGATAACCCCGACCACCTAGCTCTCGCCAGTGTCGAGGCTTAGACCCATGGGGACTACTTTTGTAAAGGTCACGCTCTTAACTGCCTAGTGGACGAGCTGTACAATGTGTACagtgaagtcagTACTTCCAAGCACCTTTGGGAAGCCTTGGAAAAGAAGTACAAGATCTTCAATGTAGGCTCTGGAAAATTCGCTAAGACGAAATTCCTCCACTTCAAAATGATGGATTCCAAACCCATCATGGACCAAGTTCACGAGCTACAGATGATAATTCAAAGCATAGCTGATGAGAGAATGAACTTTGTGATACATTCTTAGTGAATTGCATTATTGAGAAGCTACCTCCATGTTGGGAAAGCTTCAAAAACTATCTTGCTTATAAGCAAAAGCCTCTGACGCTGCCGAAC

Boechera stricta (v1.2)

ID:

Scaffold22157_LTR_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

208

Start:

622273  

End:

622480

Strand:

+

>Scaffold22157_LTR_98

ctagtataaatagtgttgcttcctcaccatggttcactagcttggtcaaggggtcactatggaaaatgagagatatgggccattatgcaaaaacacacacacacgcgcgccgcagccgccgccgagccgggccgggctcgggtctcgagtctcggggaatgtgggcctcaaggcccacaaagattgttctttttggacaaaatttcta

Boechera stricta (v1.2)

ID:

Scaffold22545_LTR_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

226

Start:

56925  

End:

57150

Strand:

+

>Scaffold22545_LTR_99

CTATTGTAATCGAGGAagaacccgagattgaagaagtctttaaggagaaactggataaggataaagagtctgccactcatgtaaggaGCCCGGTGACACTCGACATGCACAATTATCAACCAAAAATTCCTTTTCCCAGAAGGATAAAAGGGAGAATATTGGAGAGAATGAAGAATGCATTTGAACAACAAATGAAATGTGTGATCATCACTATGCCGATAATGGA

Boechera stricta (v1.2)

ID:

Scaffold22685_LTR_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2135

Start:

214791  

End:

216925

Strand:

-

>Scaffold22685_LTR_100

GGATGTACTATTGGTGAACTCACTAGCTCTTTCTTGATCGATCGGAATGTTTCAAAACATGCGTCATCGAAGTTGAACTCGACATCCTTGCATAGCAGGCtggtgagtggtcttgctatcttagaaaaatctttgatgaatcttcgataaaaattagcatgaccaaggaaacttcgtatgtctttcaccatttttggaggccctagacttgtcatcacatcgatCTTGGCCTTGTCGACTTCAATCCCTCTTTCCGATATCTTATGTCCGAGAATGATTCTTTCTCTCACCATAAAATGGCACTCTTCCTAATTGAGTACGAAGTTTGTCTCTTCGCATCATTCAAGTACCTTGCATAAATTAGACAAACAACCACCAAACGAAGAACTATACACAGAGAAATCACCCATAAATACCTCAACTACTGATTCAATTAAATCTGAAAATATTGAcatcatgcacCGTTGAAAAGTCGCAGGTGCATTACATAATCCAAACGTCATTCTTCAGTAAGCGAAGGTACCATAAGGACATGTAACTGTCGTTTTTTCTTGATCTTGAGGATGTATCGGgatttgaaagAATCCCGAGTACCCATCTAAAAAGCAATAGTGACAGTGATTTGCTAATCTTTCTAATATTTGATCAATAAACGGAAGGGGAAAATGATATTTTTTAGTGGCAGCATTTAAGTTTCTAAAATCAATACACATCCTATGTCTGGTGATAGTTCTAGTTGGAATTAAttcgtcatttTCATTTTTTATTACAGTTATTCCACCCATTTTAGGGACTCCATGAACAGGTGAAACCCAATTACTATCGAAAATAAGATATATAACACCTGCATCTAGAAGTTTAAGAATCTCTTTCCGCACTACATCTCGTAAATTTGGATTTAAACATCTTTGAGGTTCAATGGAATTTTTAGTTTCATTTTCTAGATGTATTCTATGCATGCATAAGGATGGGGATATTCTCTTGTTATCATCTAAAGGATATCCTATGGCTTTCCTATATATTTTTAATTATCTAAGTAAAATCGAGGTTTCATCTTCATTTAGTTCATCACTtattatgactgGATATGTTGAATTAGGACCGAGAAACGCGTACGTTAGCCCTTTCGGTAGTGGTTTCAGCTCCACCTTTGGTGCTTTGAGCTTGCTCCAATCGTCTTCATCGCAATTCTCACCATCGCCTGCTTTTACCGTGGCTTCCTCTTCTTCTTCACCCTCGGTTAGACTCGCATAAGCCATCTCATGAGGTATCATGTCCGCCATGTctccattctgtAGTGTTTGGAATTCTTCACTTTGGTCCTCGTCATTAGGTTCAACCTCATCTAATATACCATTAGCTAGCAAGTCAAGATCGTCTATGTAGAAAATACGATCTCGTTCTTCAGGTTTCTTCATCACCTCATCGATACTAAACTACATGACTTCATCGTTTAGgtgaaggttgatatttctgtttttaacatcgatgatggctcccgcggttgctaggaatggtctccctaggatgagtggatctttgggctcgtgaTCCATCTTGAGTACCACAAAATCAGTCGGTATTTGATAATCACCAATCATTTCCAGAATGTCTTCTGAAGGTCCCACCGGTATTTTTATCGAGCGGTCGGCGagaactagcgaCATCTTACACTCCTTGAATCTTGTAAATCCCAATTTTTGTGCAATGGATAGAGGCATGAGGTTCACACTAGCTCCAAGATTACATAAAAATCTCCCAAATGTTATCGAACCTATATTGCAAGAGAGAGTGAAGCTACCCGGATCTTCTAATTTCTTCGGAATTTTATTGTCGAGAATAACCGCGCTACACTTGTGTGTTAGGAATGCTACCTCGGTGAGGTCCTTATTCTTCTTAGTCACGAGATCTTTGAGGAATTTGTTAGCATTGGGAATCAACGTCAAAGCTTCTAGTATCGGCATAGTGATGATTACACCTTTCCTTTGCTATTTAAATGCATTCCTCATTCTCTCAGCTATTCTTCCTTTGATCCTTCCCGGAAAAGGAATTTTAGGCTGATAATTGTGTACGTCGAGTGTCACCTGActccttccacgAGTATTAGGCTCTTTATCCTTATCTGGTTTCTCCTT