Boechera stricta (v1.2)
ID:
Scaffold18351_LTR_61Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
325Start:
361922End:
362246Strand:
+>Scaffold18351_LTR_61
TTTTCTAATGACCGAGATGAGCAAACTTGAAGAGGTGCTTCAGAACATTCTAGATGGGGAATCAAGCAAAGGTGCAAAGGGCAGCGAAGAATTCACAAATATTGAACAAAGATGGCGAGAACTAGATAAGAAgttcgacgatTTGGTTTCTAAAGTCCGAGTATTAAAAACCCAAATTGTTGAGGAAGTATCAACGATCAATGCTATAACCTTGAAGAGTGAAAAGGAGCTCAGACTGATCCCACCGAGGCAACCAATCAACAAAAAAAGGGATAAGACTATCATCGAGAAAGAAAATCCAATACTCGAGAAGGAAGATCCCATC
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR_62Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1128Start:
362258End:
363385Strand:
+>Scaffold18351_LTR_62
CTCGTGTGAGGAGCCAAACGATacccgatccaCTTAAATATCAACCTAAGATCCTTTTTCCGGGAAGGAACAAAGGGAGGATAGCGGAGAGACTGAGGAATGCATTTGAACAACAATTGAAGGGTGTAATCATCACTATGCCGATACTAGAAGCTTTAACGATGATTCCCAACACTATCAAATTCCTCAAGGATCTCGTAATTAAGAAGAAGAAGGAGTTCACCGAGGTTGCGTTCCTAACAAATGAATGCAGCGCAGTTATCCTCGACAAAAAGATTCCAAAGAAATTGGACGATCCGGGCAACTTCACTCTCTCTTGCAGTATAGGTCCAATAACATCTGGGAGACTTCTATGTGATCTTGGAGCTAGTGTGAAcctcatgcctcAGTCCATTGCACAAAAGTTGGGATTCAATACATTAAAAGACTGTAGGATGTCACTCGTTCTCGCCGATCGCTCGATAAAAACGTCGGTTAGATTACTCGAAGAGATCCCGGTGATGATTGGTGACTACCAAATTCTAACCGACTTTGTGTTACTCAAGATGCATCATCAGCCTAAAGATCCACTCATCCTAGGAAGACCATTCCTAGTAACCGCGGGAGCCATCATCGATGTTAAAAACGGAAAAATTAACCTTCACCTAAACGGCGAAGTAATGCAGTTTAGTATCaatgaggtgatGAAAAAACCCGAGAAACGAGATCGTATCTTCTACATAGATGATCTTGACTTGTTGGCTGATGGTGTGTTGGATGAAGATGAGCTCGAAAACGAAGAgctaagtgagGAATTCCAAACGCTACCAAATGGAGACGTGGCGGACATGATACCTCGTGAAATGGTTTACGCGAGCTTAACCGAAGGTGACGAAGAAGAAGAAGCCACGGAGGAAGCAAGCGATGGTAAGACTTGTGATGAGGACGATTGGAGTGAACTCAAAGCACCGAAAGTGGAGTTGAAACCACTTCCGAAATGGCTAAGGTACGCATTTCTAgggccaaattcAACATATCCTGTCATAATAACTGATGAGCTTAATGATGATTAAATTTCCCTTTTACTTTGTGAATTGAGAAAATAtagaaaagcaATAGGATATTCCCTAGATGATATCAAAGGCATAT
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR_63Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
185Start:
881586End:
881770Strand:
+>Scaffold18351_LTR_63
ATGGCAAATTAGCAATTTAAATATTTAAATGCTAATTTTTACTAATCTCTCCTAAAAGTACAGACTTAACTGTCTCTCTTTTGAACAAATGACTAAGGGAACTGAGATTGCTGGCAACTCCAGCGGTGGTGCAGTCAAAAGAACCAGTGAGTCGACACCCCTTCTTGGGACCGGTCAACCATTCG
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR_64Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
316Start:
881763End:
882078Strand:
+>Scaffold18351_LTR_64
ACCATTCGCTACAGCGACTTTCCTTAACTACAAAATGGTGGACTCAAGGCCCATCATGGAACATGTGCATGAGCTACAAATGATATGTCAAGGAGTAGCAGATGAAGGATGAAGGACTGAAAATCTATGAGACATTCACGGTGAATTCCCTTGTTGAGAAGCTACCTCTAAGTTGGGGGGACTTCAAAAGCTACCTTGCGTACAAGCAGAGGCCTCTGATATTGCTAAACTTGATTTTCAGGCTGCAAAATGAGTCATTGAAACGTGACAAAGCTATGTCAATTCATGGTCATAATGCAAATTTGGTCATGGCTGA
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR_65Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
158Start:
882913End:
883070Strand:
+>Scaffold18351_LTR_65
GTCCGTTTAATGTTTTTTGTCAAGAAAAATGCATTATTCATCAGACGACCGCTCCATATTCACAAGAATCTAACAGAGTTGCCGAACCTAAAATCGAACTCTGAAAGAAATGATGAATGCAATATTGCAGGAATCTGGGGTAGCCCAGAATCTGTGGG
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR_66Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
118Start:
2107118End:
2107235Strand:
+>Scaffold18351_LTR_66
GGCCTTGGATCTTGATGAATGTGGGATTTAGGCCCACTAAGATAATTTTTTTTGGAATAAAATTTGTTGATTTTATCAATATTTCCCTTAAAAAATTTTGCATAATATCTTGGATAAA
Boechera stricta (v1.2)
ID:
Scaffold19110_LTR_67Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
4517Start:
39858End:
44374Strand:
+>Scaffold19110_LTR_67
ACAACATCGACCACTCACCATCGATGCTTTCTATGAAGGAACGATCGAGCAACACCATCGACCAGGAGTGGTCGATGGCTTTGCTCTGGCTATCAAAGAAAGAGCACATCAGACAGAGCATCGACCGTACACCATCGATGCCATGACAGGAGGAGCCATCGATCAAACCCATCGACCTGAGGTGATCGATGTTTTCCCTGGAGACAACAATGAGACGAGTTCCCTCAAAACCGGGACAAGAGAACTTGAGAAGGCAATTCAGAACATTCTAGATAGAGAATCGAGTAAAGGAGCAAAGGTTGGTGAAGAGTTTACAATCATGGGTCAATAGTGGAACAATCTAGATGAGAAATTCAAAGACCTGGCCTCAAAGGTCCAAAATATAGAAACGCGGACAAAGAAAGAGTCACAGTCAGTCAAAGCAATAACCTTGAAGAGTTGAAAGGAGCTCAGACCGATTCCACCTAAGCAACTAATAAACAAGAAAAGCGAAGGGGCTAacatcgagaaaGAAGACGACCCTATCATGATTGAGAAGGAAGAACAAATAGTCGAGAAGGAAAATCCAAAGATATTTGAGGAGGAACCAGAAGTCGAGGAGGTcatcacggagAAGCCAGACAAAGATAGGGAGCCCGACATTCATACTACGAAAATTCACACAAACGAACCTTAGACTCGCATAAGGAAACAAGTGACACACAATCTCCTAAAATATCAACCTAAAATCCCTTTTCCGGGAAGAATTAAgggaagaatagCGGAGAGAATGAGGAATGCATTTGAAGAACAAATGAAAGATGTGATCATCACTATGCCGATACTAGAAGCCTTGACGAtgattcccaaTGCTAGCAAGTTCCTCAAGGATCTTGTGACTAAGAAGAAAAAGGAACTAACCGAGGTGGCGTTCTTGACACACGAGTGCAGTGCCGTCATCCTCGACAAGAAGATTCCAAGAAAGCTAGCTGACCGAGGCAGTTTCACTCTCTCTTGCACTCTCGGTCAGATAACATTCGGGAGATCTTTATGCGATCTTGGAGCTAGTGTGAATCTATTGCCTCTATCCATTGCACAAAAGTTGggacttactcgattCAAGGAGTGTAAGATGTCGTTAGTTCTCGCTGATCGCTCAGTAAAAACGCCGGTGGGATTACTTGAATACATTCCAGTAATGATTGGTGAATACCAAATACTGACAGACTTTGTGGTACTCAAGATGGATAACGAGCCCAAGGATCCACTTATCCTAGGAaggccattcctAGCTACCGCGGGGGCCATCATCGATGTTAAAAATGGGAAGATTAACCTTTACCTAAACGATGAAGTGATGCAGTTTAGTATCGATGAGGTTATGAAGAAACCCAAAAAACGAGACGTATTTTCTACATAGATGATCTCGAtttactagctaATGGAGAATGGGACGAAGTTGAGCTCAAACACGAATAATTAAATGAAGAATTCCAAACACTACGAATTGAAGACATGACGGACATGAGTCCTCATGAGATGGCGTATGCAAGTCTAACCAAAAATGACGAAGAAGAAGAAGCCGCAATAGAGGAAAGCGGCGATGAGACTTGCGACGAAGACGATTGGAGCGAACTCAAGGCACCAAAAGTGGAACTAAAACCACTTCCAAAAGGGATAAGGTACGCATTTCATGGATAAAATTCAACATATCCTGTCATAATTAGTCATGAGCTTAGTGATGATGAAACCACAATGTTACTCAATGAATTAAAAAATATAGAAAAGCTATAGGATACTCTTTGGATGATATAAAGGGAATATCCCCGTCCTTATGCATGCATATAATACATCTAGAAGATGAATCTAAAAATTCCATTGAACCTCAAAGAAGTTTAAATCCAAATTTACGAGATGTAGTGCGGAAAAAAATTCTTAAACTTCTAgatgcgggtgTTATTTATCCTATTTCCGATAGTAATTGGGTTTCACCTATTCATGTAGTCCCTAAAAATGGTGGAATAACTGTAATAAAGAATGAAAATGACGAATTAATTTCAACTAGAACTATCACTGGACATATGATGTGTATTGATTTCAGAAAATTAAATGCTGCCACTAGAAAATATCATTtttctcttccgtTTATTGATCAAATATTAGAACGATTAGCAAATCACTCTCACTATTGCTTTCAGATGGGTATTCGGGATTCTTTCAAATCTTGATACATCCTCAAGATCAAGAAAAAATAACATTTACATGTCCTTATGGTACCTTCGCTTACCGAagaatgtcgtTTGGGTTATGTAATGCACCTGCAACTTTTCAACGGTGCATGATGTCAATATTTTCTGACTTAATTGAATCAGTAGTTGAGGTATTTATGGATGATTTCTCTGTGTAtggctcttcgtttggtggttgtttgtctaatttgtgcaaggtacttgaacggtgcgaagagacaaacCTAGTACTTAATTGGGAGAAGTGTCATTTCATGGTGAGAGAAGGAATCATCTCGGACATAAGATATCGGAAAGAGGAATTGAAATCAACAAGGCCAAGATCAATGTAATGACGAGTCAGGGCCTCCAAAAACAGTGAACGACATATGAAGTTTCCTTGGTCATGCTAATTTTTATCGAAGATTCATCAAAGATTTTtctaagatagcaagaccactcaccagcatgctatgcaaggatgtcgagttcaacTTCGATGACGCATGTTTCGAAGCATTCCGATCGATCAAGAAAGAGCTAGTTAGTGCACCGATAGTACAACCGCTAGATTTGGGGTTTCCGTTCGAGATTATGTGTGATGCTagtgactatgcCGTAGGAGCTGTGCTTGGGCAACGCAAGGACAGAAAAGTGAATGCTATCTATTATGCAAGTAGGACTCTAGATGAAGCACAAATGAATTATGCCACTACGGAGAAAAAGCTTCTAGCGATCGTCTTTGCTTTTGAGAAGTTTTGCTAATACTTAGTAGGTTCTAAAGTCATTGTACACACGGATCATGCGGCGCTAagatatctacttgctAAGAAGGATGCAAAACCGAGGCTGCTCCGCTGGATACTACTCCTCCAAGAATTCGATTTGGAAATAAAAGACAAGAAAGGAATAGAGAACGGAGTGGCGGACCACCTTTCTCGGATGAGAATCGATGCCAAAATCCCTATCAACGATTCATTACCAGAGGAACAAGTCTATGTAATTAGAGTATTTGTCGGCGAGCACAACCTCATAAGGAGCTGAAAAGCATCAACGCCATCCAGGACAAGTCACCATGGTACGCCGACATAGTCAATTATCTGGCTTGTGGAGAAAAACCACCTGATCTTGTCTGATATCACAAGAAAAAGATTTTCAAGGAGATAAATCGGTATTATTGGGACGATCCAAACCTCTACAAACTATGTAAGGATAAAATATACATAAGATGTGTTTCTGAGAATGAGGTTCACGAATCCTGACGGGATGCCATGAATCTACATACGGAGAACATTTCGCTACATTCAAGACAATAGCTAAGGTGTTGCAAGCTGGATTTTGGTGACCGACTTTATTTCGAGACGCTCACCGATTCATCTTAGCCTATGATTCATGTCAAAGAAGAGGGAACACAAGTAGGAGGAATGAGATGCCTCAAAATCCGATAATAGAGGTAGAAGTTTTCGATGTATGGCGGATAGATTTTATGGGACCTTTCCCAAAATCACATGGAAACAACTACATCCTAGTAGCAATAGATTACGTATCTAAATGGGTAGAAGTTGTGGTGAGTCCAACAAACGACGCAAAGATAGTTCTTAAACTTTTTAAGAGCTTCATTCTTCCACGATTCGGAATCCCGCGAGTGGTGATTAGCGACGGAAGGACACACTTCATCAACAGAACTTTCTATAAGCTCTTACGAAAGCATGGTGTCAAACATAAAGTGGCGACACCATATCATCCTCAAACAAGTGGACAAGTGAAAGTTTCCAACCGTGAAATCAAAGCAATCTTAGAAAAGACGGTGAACATTTCACGAAAGGATTGGTCACTCAAGCTTGACGATGCTTTGTGGGCCTATCGAACAGCTTTCAAAATGCCTATAGGTACTACTCCTTTCAATCTTTTCTATGGAAAATCTTTTCATTTACCGGTGGAGCTCGAGTATAAAGCTATGTGGGCCTCAAGATGCTGAACTATGACATCAaaaccgctgcTGAAAAGCGCCTCATGCAATTAAATGAACTAGACAAGATTCGCCTGGATGCCTATGAGAATGCTCGGATATACAAAGAAAGGACAaaagcattccaTGACAAGCGAATACTTCAACGAGAATTTAAGGTCAACGATCAAGTCCTGCTTTTCAACTCTCGATTTAAGTTTTACAGAGCTATAGAATTAAGTTTTCCAGGCAAACTTTGATCTCGTTGGTCCGGACCATTCAAGATAAAAACGGTGACGCCTTATAGAGCTATAGAATTATGGGAAAATAACGGGGAAAGCTTCACGGTGAACGGTCAACGT
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_68Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
647Start:
102251End:
102897Strand:
->Scaffold19424_LTR_68
TCCACTAGAGTCATCCCAAGATTTGCATCTTGCCCCAAAAAAGTTTTGTGGCTAGCTACGTCTAGTAGTATACGGTATTCATGTGTCACTCctcggtagagAATGCTAAGTAAATGCACATCGTTGAATCCATGATGAGGACATTGCGTGGTGTAGCCCACAAGTCTTTTCCACGCCTCTCCAAAGCTCTTGGTGCTTTGTTGTGTGAAGTTTGATATCTTGTTTCTCCAAAAAGTTATCCTAGCGTTCGAGTAGAACTTTTTCAGGAATGCTTACCGGTATTGCCTCCACGTCGTAACAGTCTCCGATGGAATGTTCATCTCCCATTGATGTGTTTCACCCCTAAGTGAAAATGGAAATAAACGCAGTTTTAGTGCATCTTCAGAGAGACCATTTATGTGTACCATCCCACACAACTTGTCAAAGTTATTCAGATGTTCTATAGGGCTCTCCGTTGATAGACCTTGGAACTTTTCTCTTTGGACAATGTTAACCAAGTCGACCTTGATTTCAAACTCGACATCTCCCACTGGTGGTGGTTGTATGCCCGTGCAGTTGCCATGACTTGTTGGCTCGTCGGCCATGCCTATTGTTCGtgttgctcttGGCATACGCATCACGTTCTCGTCTATCCAGTCCAACAACTG
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_69Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
2197Start:
268763End:
270959Strand:
+>Scaffold19424_LTR_69
TGGACTAGTTGCTGAATTGAATAGACGAGAATGTGATGCGTATGCAGAGAGCAACACGAATAATAGGCATGGTCGACGAGCCAACAAGCCAATAACCGCATGGGCATACAACCACCACCAGTGGGAGATGTCGAGTTCGAAATCAAGGTGGACTTGATTAACATGATCCAAGGAGAAAAATTCCTAGGCCTATCAAAGGAGAACCCTATGGATCATCTGGATCACTTCAACAAGTTATGCGGGATGATACACATAAACGGCCTCTCTGAAGATGCATTAAAACTTCGTATATTCCCATTCTCACTTGGGGATAAAGCACATCAGTGGGAGAAGAACATCCCATCAGAGACTATTACAACGTGgagtcaatgccGGAAAGCGTTCCTGAAAAAGTTATACTCAAACGCTAGGACAGCTCATTGGAAAAACAAGATATCAAACTTCGCACAACGAGGCACTGAGAGTTTTAGAGAAGCGTGGGAGAGGATTGTAGAGTACACCAGACAATGCcctcatcatggATTTGGCGATGAGTCCTTGCTGAGCATATTTTACCGGGGAATGACTCCTAAGTATCGTACGTTACTCGATGCAGGGAGCTGTAGAGCTTTCTTAGGGCAAGACGCGCAACGTGGAAGGAAGTTAGTGGAGAATCTAGCCGAGAGTGATGCAAACTACGGAGGAGACTATGATCGAATAAACAAACATGCTGACATACATGAAGATGAGGAGAAGCTGACCATGGAGGCGCTACACGAAAAGTTAGACAAGGTTCTGAAATCGACGCAACATTTCGTCTCGTCAAAACGATGTGGAGAACAACACCATCGACCAGGAGAGGTCGATGGCCTTCCTGGAAGCATCATCAGGCATAAGCATCGATCGTACGCCTCCGATGCAACACCGGATACTAACATCGATCAAGAACATCGACTGTACATGGTCGATACCTTTCACATCGGACCAGACCATCGACCATGCGTGGTCGATGCTCTTGCTAAGAACAACGAAGAAACGAGTTTCTTGACGACTAAGACGGACAAAATCGAGGGGATGATTCAGGATGTCATGGAAAGACAAACAAGCATGGTTGCAGGGATTAGTCGAGAGTTCAAAAAGGTTAATCAACGGTGTCATGAGTTAGACGAGAAGTTCGAAGACTTGGTTTGTAAAATCCAAAAGCTAGAAGCCCGAACAATGGAGAAAGCACCGACGATCAATGCTATAACCTTGAAGAGTGGAAAGGAGCTCAGActgatcccacctaggcaaccaatcaacAAAAAGAGGGAAGAGACTATCATCGAGAAAGAAAATCCGATCATCGAGAAGGAGGATCCAATCCCCGAGAAAGATGATCTTATTGAAATCGAAGAAGAGCCTGAGATTGAAGAAGTTTTTAAGGAGAAGCCGAACAAGGATATGGAGTCCGACATTCGTACAACCAACACTCGTACAAGGGAACCTGAAATTCGTGTAAGGAGCAAAGTGATACCCGATCTACCTAAGTATCAACCTAAAATTCATTTTCCGGGAAGAATTAAAGGAagaatagcggaGAGAATGAGGAACGCGTTTGAAAAACAAATGAAAGGCGTAATCATCACTATGCCAATACTAGAAGCCTTGACGATAATTCACAACGCTAGGAAGTTCCTCAAGGACCTCGTGACTAAGAAGAAGAAGGAGCTCACCGAGgtggcattccTAACGCACGAGTGCAGCGCCGTCATTCTCGACAAAAAGATTCCAAGGATGTTAGATGATCCGAGTAGTTTCACTCTCTCTTGCACTCTCGGTCAAATAACAttcgggaggtCTTTGTGCGATCTTGGAGCTAGTGTGAACTTCATGCCTTTATCAATTGCACAAAAGCTGGGATTTACTCAATTTAAGGAGTGTACGATGTCACTAGTTCTTGTCGATCGCTCGATAAAAATACCGGTTGGATTACTCGAAGACATTCCGGTGAAGATTGGTGACTACCAAATTCTAACCGACTTTGTGGTACTCAAGATGGATCACTAGCCCAAAGATCCATTGATCCTAAGGAGACCATTCTTAGCAACTGCGGGAGCCATCATTGATGTCAAAAACGGAAAAATTGATCTTCATCtaaacaacgaaGTTATGCAGTTTAGTATTGACGAATTGATGAAAAAACCCGAAGAACGAGACCGCATCTTCTACATAGATG
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_70Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
3106Start:
274611End:
277716Strand:
+>Scaffold19424_LTR_70
ATAGACGATCTCGACTTGTTGGCTGATGGTGTGTTGgacgaagttgAGCTCGAAAACGAGGAGCTAAGTGAAGAGTTCCAAACGCTACAAAATGGAGACGTGGCAGACATGATATCTCGTGAGATGGCCTACATGAGTCTAATCGAAGGTGACGAAGAAGAAGATGCCACGGAGGAAGCAAGCGATGGTAAGACTTACGATGAAGGCGATTGGAGCGAACtcaaggcgccGAAAGTGGAGTTGAAACCACTTCTAAAAGGGCTAAGTTATGCGTTTCTCGGTCCTAATTCAACATATCCTGTCATAGTAAGTGATGAACTcaatgatgatgaaATTTCTATTTTACTTTGTGAATTGAGAAAGTATAGAAAAGCTATAGGATACTCTTTATATGATATCAAGGACATATCCCCATCCTTATGCATGCATAGAATACATTTAGAAGATGAGTCTTAAAATTCCATCGAACCTCAAAGGCGCTTAAACCCAAATTTGTGTGATGTCGTAAGAAAAGAATTTCTTAAACTTCTAGATGCAGGAATTATTTATCCTATATCTGATAGTAATtggatatcacctgttcatgtagttcctaaaaaggatgttatcactgtggtaaaaaatgaaaatgacgaattaattcatactagaactatcacgggacataggatgtctattgatttttggaaattaaatgctgccactagaaaaggtcatttttctcttctgtttattgatcagatgttagaacgattagtaaatcactctcactattgttttttagatgggtatttggaattctttcaaattctgatacacccgcaaaatcaagaaaaaatgacatttacatgtccttacagtacctttgcttatcgaagaatgccgtttggactatgtaatgcacctgcaacctttcaaaggtgtatgatgtcgatattttcatatctaattgaatcagtagttgaggtgtttatggatgatttctctGTGTATGGTTCTTCGTTTGGTGGTTGTTTGTCTAATTTTTGCAAGGTACTTGAACGATGCAAAGAGACAAACCTCATACTTAATTGGGAGAAGTGTCATTTCATGGTgagagaaggaaTCGTTCTCGGACATAAGATATCGGAAAGAGGGATTGAACTCGACAGGGCCAAGATCGATGTGATGACAAGTCTAGGGCCTCCAAAAATATGGTGAAAGACATACGAAGTTTCTTTGGTCATGCTAATTTTTATCAAAGATTCATCAAAGATTTTTCTAAGATAGCAagaccactcaCCAGCCTGCTATGCAAGGATGTCAAGTTCAACATCGATGATGCATGTTTCGAGGAATTCCAATCAATCAAGAAGGAGCTAGTGAGTGCACCGATAGTAAAACCGCCGGATTGGGAATTGCCGTTTGAGATTATGTGTGATGCTAGTGATtatgcggtaggagcTGTGCTAGGACAACGCAAGGATAAGAAGCTGAATGTCATCTATTACGCGAATAAAACACTAGACGAAGCGCAAATGAATTACACTACTACGGAGAATGTGTTTCTAGCGATCGTCTTTGATTTTGAGAAGTTCCGTCAATACCTAGTCGGCTCAAAAGTCATAGttcacacggaCCATGCGGCATTAAGGTATCTACTTGCAAAGAAAGATGCAAAGCCAAGGCTACTCTGATGGATACTACTTCTTCAAGAGTTTGATTTGGAGATAAaagacaagagaGGAATAGAAAACGGAGTGGCTGATCATCTTTCTCGGACAAGGATGGAGGACGAGATACCTATTGACGATTcactaccagaAGAGCAAGTCTACGCTATTAGAGTATTTATTGGCGAGCACTACCTCAACAAGGAACTGAAGATCATCAACGCCATCAAGGATAAATCACCATGGtatgctgacatCGTCAACTATCTCGCTTGTGGAAAGAAACCGCCTGATCTCGTCGGATATCATAAGAAGTTTTTCAAAGAGATCAACCGATACTATTGGGACGACCCAAACCTCTACACATTATGTAAAGATAAAATCTATAGAAGGTGCGTTCCCGAAGATGAAGTACATGGAATTTTAACGGAATGCCATGGATCTACGTATGGaggacatttcgCTACATTCAAAACGGTAGCTAAATTTTTACAAGCTGGATTTTGGTGGCCAACTTTATTTAGAGATGCTCATTGATTCATTCTAGCTTGTGATGCATGTCAAAgaagaggaaaCATAAGTCGAAAGAATGAGATGCCTCAAAACCTGATAATGGAGGTAAAAGTCTTTGACGTGTGGGACATTGATTTCATGGGACCTTTCCCGAACTCACATGGTAACAACTACATCTTAGTGGTAGTTGATTATGTATCTAAATGGGTAGAAGctgtggcgtgTCCAACAAACGATGCGAAGGTAGTTCTGAAACTTTTTAAGAGCATCATTTCCCCGCATTTTGGAGTTCCGCGAGTGGTGATTAGCGACGGAGGAACGCATTTCATCAACAAAACTTTCGACAAACTACTAAGGAAGCATGGCGTTAGACACAAGGTGGCAACATCATATCATCTTCAAACAAGCGGACAAGTGGATGTTTCAAACCGGGAAATCAAAGCAATCTTGGAGAAGACGGTGTATATTTCACGAAAAGACTGGTCGCTTAAGCTAGACGATGCTTTGTGGGCTtatcgaacagctttcaagactcccattgctacaactcctttcaaccttctctatggaAAGTCTTGTCATTTGCCGGTTGAGCTAGAATACAAAGCTATGTGGGCTGTAAAGATGCTTAACTACGACATCAAAACCGCGGCAGAAAAGCACCTCATGCAATTGAACGAACTAGACAAGATTCGTTTAGATGCCTATGAGAATGCTCGGATATACAAGGAGAGGACAAAAGCATTTCATGACAAGCAAATACTTCACCGAGAGTTTAAGGTAAACGATCAAGTACTACAATTCAACTCTCGTTTGAAGCTCTTTCCGGGAAAGCTCTGATCTCGTTGGTCTGGTCCCTTCAAGATAAAGTCAGTAACGCCTTACGAAGCTATAAAGCTATGAGGCAACAGTGGTGAGAGTTTCAAGGTGAACGGACAACG
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_71Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
233Start:
846400End:
846632Strand:
->Scaffold19424_LTR_71
CAGAAATACCATCGATCCCTCCTGGTCGATGGTGTTGCTCGATGACTCCCTCAGAAAAAGCATCAACCTCTTATGATCGATGTCGTCGTCCGAAGGACTTCTCTGAGATATCTGCATCGACCGTCTGTGGTTGATGTTATGGTCGATGCTGGTGTTTGTTGACCTCTCCAAGATTACCATCGATCTTTCTTGATCGGTGATGTTGTTTTCCGTTACATTCTTTCAGAACAAAA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_72Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
4258Start:
960269End:
964526Strand:
->Scaffold19424_LTR_72
tgtccgTTCACCTTGAAGCTCTCTCCACTATTGCCCCATAGCTCTATAGCTCCGTATGGTGTTACAAACTTTATTTTGAAGGGTCCGGACCAATGAGATCGGAGTTTTCCCAGAAAGAGCTTCAAACGAGAGTTGAATAGTAGAACTTGATCGTTTTCCTggaactttcttCGAAGTATTCTCTTGTCATGGAATGCCTTAGTCTTCTCCTTGTATATTCAGGCATTCTCATAAGCGTCTCAGCGAATCTCATCTAGCTCATTCAGTTGCATTAGGCGCTTCTCCGCAGCGGTTTTTATGTCGTAGTTCAGCATCTTGACAGTCCACATAGCTTtgtattctagctcaaccgacaaatgacaagaCTTTCTATAGAGAAGGTTGAAAGGAGTTGTACCAATGGGAGTCTTGAAAGCTGTTTGATAAGACTACAAAGCATCGCCTAGCTTAAGCGACCAGTCTTTTCGTGAAATATTCACAGTCTTCTCCAAGATTGCTTTGAtttcccggttTGAAACCTCCACTTGTCCGCTTTTTTGAGGATGATATGTTGTTGCCACCTTGTGTCTAACGCCATGCTTCTTTAGGAGTTTATCGAAAGTTTTGTTAATGAAGTGCGTGCCTCCGTCGCTAATCACCACTCGCAGAACTCCGAAATGCGGAAAAATGATGCTCTTAAAAAGTTTCAGAACTACCTTCGCATCGTTTGTTggacacgccacaacttctacccatttaAATACATAATCAACCGCCACTAAGATGTAGTTGTTACCATGAGAGTTCGGAAAAGGTCCCATGAAATCGATGCCCCACACGTCAAAGACTTCTACTTCCATTATCGGGTTTTGAGGCATCTCGTTCCTTCGACTTTGTTTTCTTTTCTTTGACATGCATCACAAGCTAGGATGAATCGGTGAGCATCTCTAAATAAAGTCGGCCACCAAAACCCAGCTTGTAGAACTTTAGCGACTGTCTTGAATGTAGCGAAATGTCCTCCGTATGTCGATCCATGGCACCCCGTTAAAATTCTGTGAACTTCATTCTCCGGAACACATCTTCTATATATcttatccttgcATAGCGTGTAGAGGTTCGGATCATCCCAATAGTATCTGTTTATCTTCTTATAGAACTTTTTCTTATGGTATCCGATGAGATCGGGCGGTTTCTCCCCACATGCAAGATAGTTGACGATGTCAGCATACCATGGTGACTTgtccttgacgGCGTTGATGCTTCTCAGCTCCTTGTTGAGTTTGTGTTCGCCAACAAGAACTCTAATGGCATAGACTTGCTCTTCCGATAGTGATTCATCAATAGGAATCTCATCAGTGATCCTcattcgagaaaGGTGATCAGCTACTCCGTTCTCTATTTTTTTCTTGTCTTTTATCTCTAAATCGAACTCTTGTATGAGTAATATCCAGCAGATTAGTCTTGGTTTCGCATCTTTCTTCGCAAGTAGGTACCTTAGGGCCGCATGATCAGTGTGTACAATGACTTTAGAACCGACCAAGTATTGGAGGAACTTCCCAAAAGCAAAGACAATCGCTAGAAGTTCTTTCTCCGTagtggcgtaatTCATTTGCGCTTCGTCTAGCGTCTTACTCTCATAATAGATGACGTTCAGCTTTttatctttacgTTGTCCAAGCACAGCTCCTACCCCATAATCGCTAGCATCACACATGATCTCGAATAGTATCCCCAATCTAGTGGTTGTACTATTGGTGCGCTTACTAACTCCTTGATGAATTGAAATGCTTCGTGACATGcgtcatcaaagTCGAAGTTCACCTCCTTGCATTGCAATCTCATGAGCGATCTTACTATTTTTGAGAAGTCTTTAATGAATCTTCGATAAAATCCCGCATGACCCAGAAAActccgtatgtcTTTCACCGTTTTTGGAGGCCCTAGGCTTGTCATCATATCAATCTTGGCTTTGTCGACTTCAATCCCTCTTCCCGATATCTTATGCCCAAGAACGATTCCTTCTCTCACCATGAAATGGCACTTTtcccaattaagtacgaggtttgtctcttcgcatcgttcgagtacctttcacaaattaGACAAACAACCACCAAACGAAGAGCCATACACAGAGAAATCATCCATAAACACCTCAACTACATATTTAATTAAATCTGAAAATATCGATATCATACACTGTTGAAAAGTCGTGGGTGCATTACATAATCAAAACGACATTCTTCGATAAGCAAAGGTACCGTAAGGACATGTAAATATCATTTTTTCTTGATCTTGAGGATGTATTGGGATTTGAACGAATCCTGAATACCCATCTAAAAACCAATAGTGAGAGTGATTCGCTAATCTTTCTAACATTTGATCAATGAATGGAAGAGGAAAGTGATCTTTTCTAGTGGCAGCATTTAATTTTCAAAAATCAATACACATCCTATACCCGGTGATAGTTCTAGTAGGAACTAGTTAGTCATTTTCATTTTTTTTCACAGTGATACCACCTTTTTTAGGCACAACATGAACATGTGAGACCCAAGTACTATCTGATATAGGATAAATAATACCTGCATCTAGAagtttaagaatttgttttcttacgacatcacgcaaatttggatttaAACGTCTTTGAGGTTCAATAGAATTCTTAGATTTATCTTCTAAATGTATTCTATGCATGCATAAGGAGGGGGATATGCCTTTGATATAATCTAGGGAATGTCCTATTGCTTTTCTATATTTTCTCAATTCACAAAGTCAAAGGGAAATTTCATCATCATTAAGTTCACCACTTACTATGACACGATATGTTGAATTAGGACCGAGAAACGCGTACCTTAGCCTTTTCGGAAATGGTTTCAACTCCACTTTCGGCGCCTTGAGTTCACTCCAATCGCCTTCATCGCAAGTCTTACCATCGCTTGCCTCCTCCGTGGTTTCTTCTTCTTCGTCACTTTCGGTTAGGCTCGCGTAAGCCATCTCACGAGGTATCATGTCCGCCACGTCTCCATTTGGTAGCGTTTGGAATTCctcacttagctcttcgtttttgAGCTCATCTTCATCCAACACACCATCAGCCAACAAGTCGAGATCATCTATGAAGAAGATACGATCTCGTTTCTTGAGGTTTTTCATCACATCATTGATACTAAACTGTATTACTTCGTCGTTTAGGTGAAGGTCGATTTTTTGTTTTTAACATCGATGATGGCTCCCGCGGTTGCTAGGAATGGTCTCTCTAGGATGAGTGGATCTTTACGTTGGTGATCCATCTTGAGTACCACAAAGTCGGTTCGAATTTGGTAGTCACCAATCATCACTGGGATGTCTTCACGTAATCCAACCGGCGTTTTTACCGAGCGATCGGCGAGAACGAGTGacatcctacatTCTTTGAAGGTATTGAATCCCAATTTTTGTGCAATGGACTGAGGCATGAGGTTGACACTAGCTCCAAGATCACATAGAGATCTCCCAAATGTTATAGGACCTATACTACAAGAGAGAGTGAAGCTGCCCAGATTGTCCAATTTCTTTGGAATCTTTTTGTCGAGGATAACTGTGCTGCATTCATGTGTTAGGAACGTAACCTCGGTGAGCTTCTTCTCCTTCTTAGTTACGATATCCTTGAGGAATTTGCTAGCGTTGAGAATCATCGTCAAAGCTTCTAGTATCGACATAGTGATGATTACGCCCTTCATTTATTGTTCAAATGCATTCCTCAGtctctccgctATCCTCCCTTTGATCCTTCCCAGAAAAGGGATATTAGGTTGATATTTAAGTGGATCGGGtatcgtttggCTCCTCACACGAGTATCAGGTTCCACTTCCGTGTCTGATTTTTCCTTAATAACTTCTTCAATCTCGTGTTCCTCCTCGGTTACGATGGGATCTTCTTTCTCGAGTATTGGATCCTCcctctcaatgatcggattttctttcTCGATGATAGTCTCATCCCTCTTTTTGTTGATTGGTTGCCTCGGTGGGATTGGTTTGAGCTCCTTTCCACTCTTCAAGGTTATAGCATTGATCATTGGTGCTTCCTCAACAGTTCGAGTTTCTAATACTCGAACTTTAGAAACCAAATCGGCGAACTTCTTATCTAGTTTGCGCCAGCTTTGTTCAATGTTTGTGAATTCTTCGCTGACCTCTGCACCTTTGCTTGATTCCCGATCTAGAATATTCTTAATCACCTCTTCAAATTTGCTCGTCCCGGTCGTTAGAAAACTTGTCTCTTTGCTGCCCCATCAAA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_73Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
262Start:
1168032End:
1168293Strand:
+>Scaffold19424_LTR_73
ACACGCCGACATCCATGAAGCCGAGGAGAAGCTGACCATGGAGGCATTGCATAAAAAAATAGACAAGCTTCTGAAATCGACGCAACATTTCGCATCAACAAAACAACACGAAGAACAACCACATCGACCGTGGGAGATCGATGGTTCTCCGGGATGCAACATTGAGCAGATGCATCGACCATACCAGGTCGATGCTCTACCCATCGAGCCACTTCATCGACCACAAGCCATCGATGTGATTCCAAAAGGACACATCGACCAA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_74Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
4203Start:
2275438End:
2279640Strand:
+>Scaffold19424_LTR_74
TTTTCTTGGGGCAACAAGGAGACATATTCTTTAACAACCGGAACAGGCAAACTTGAAAAGATGATTCAGAACATTCTAGATGGACAATCGAGCAAGGGTGCAAAGGTGAGTAAAAGATTCACGAACATTGATCAAAGATTGCGCGAGCTAGATAAGAAGTTtgaggatttaGTTTCTAAAGTCCAAAAACTAAAAACCAAGACATTGGAGGTAACACCAACAATCGATGAGATAACCTTGAAGAGTGGAAAGGAGCTCAAACTAATCCCACCTAACAACCAATCAGTAAAAAGAGCAACGAGACTATCATCGAGAAGGAAAACCCAATCCTCGAGAAGGAAGATCCCATTGAAATTGAGGAAGAGTCTGAGATCGAAGAAGTTATTAAGGAGAAACCGGATACAAATGGAGAGCCTAACACTCGTGTAAGGAGCAAGGAGACACTCGACTTACTTTATTATCAGCCTAAGATTCCTTTTCCGGGATAAATTAAAGGGACAATAGCGGAGAGAATGAGGAATGCATTCGAGCAACAAATGAAAGGGGTAATCATCACTATGTTGATGTTAGATGCTTTGATAATGATCACTAATGCTAGTAAGTTCCTGAAGGACCTCGTGACTAAGAAGAAGAAGGAACTAACAGAGGTGGCGTTCTTAACACACGAATGCATTGCCATTATCCTCAACAAAGTGATCCCGAAGAAGTTAGACGATTCGGGCAGCTTTACCCTTTCTTGCACCTTGGGAACGACAATATTTGGGAGATCTTTATGCGATCTTGGAGCAAGTGTAAGCCTCATGCCTCTGTCCATTGCAAATAAGTTGGGATTTACTCAATTCAAAGAGTGTCGAATGTCGCTTGTTCTCGCTGATCGCTCGATAAAAACATCGGCTGGACTACTAGAAGATATTCCGGTGATGATCAGTAAGTATCAAATACCTACTGATTTTATGGTACTAAAGATGGATCAAGAACCCAAGGACCCACTTATCATGGGGAGACCATTCCTTACAACCGGTGGAGCCATCATTGATGTCAAAAACGAAAAAATCAACCTTCATTTGAACGATGAAGTTATGCAATTTAGCATTGATGAAGCGATGAAGAAACCCGAGGAGCGAGATCGTATTTTCAACATAGACAATCTTGACTTGTTAGCTGATGGAGTCCTAGACGAAGTTACACTAAACAACGAGGAGTTTCAAACTTTACAAAATGGCGAAGTAACTGACATGATACCTCGTGAGATGGCTTATGCGATGTTAACCGAAAATGACGAGGAGTTCACAGAGCCAGCAAGCAATGGTAAGACTTGCGATGACGATGATTGGAGTGAACTGAAAGCACCGAAAATGGAGCTAAAACCACTTCCAAAAGGGCTAAGGTACTCATTTCTCGGTCCCAATTCAACATATCTTGTCATAATAAGTGATGAGCTTAATGATGATGAAATCTCTCTCTTACTTTGTGAATTGAAAAAATATAGAAAAGCAATACAATATTCTCTAGATGACATCAAGGGCATATTCCCATCTTTATGCATGCATAGGATTAATTTAGAAGATGAATCTACGAATTCTATCAAACATCAAAGGCGTTTAAATCCAAATTTGTGCGATGTTGTACGGAAGGAGATTCTTAAACTTTTAGATCCAGGTATTAACTATCCCATTTCAGATAGTATTTGGGTATCGCCTGTTCATGTGGTGCCTAAAAAAGGTGGTATCATTGTGATAAAGAACCAACAGGATGAATTAATTCCAATTAGAACTATCACAGGACATAGGATGTGCATCGATTTTAGGAAGTTAAACGCTGCCACTAAAAAAGACATTTTTCCTCTTCCATTTATTAATCAAATGCTATAACGATTAGCTAATCATTCTCACTATTGTTTCTTAGATGGGTATTCGGGATTCTTTCAAATCCCGATACATCCTCAGGATCAAGAGAAAATGACATTCACATGTCCCTACGGTACCTTTGCTTATCGAAGAATGTCATTTGGATTGTGTAATGCACTTGTAACTTTTCAAAGGTGCATGATGTCGATATTCTCGGACTTAATTAAATCAGTAGTTGAAGTTTTCATGGATGATTTCTCTGTGTATGGTTCTTCGTttggtggttgtTTGTCTAATTTGTGCAAGGTACTTGAACGATACGAAGAGACAAAACTCGTGCTTAATCGGGAGAAGTGTCATTTCATGGTAAGAAAAGGAATCATTCTTGGGCATAAGATGTCGGAAAGAGGGATTGAAGTCGACAAAGCCAAGATCGATGTGATGACAAGTTTAATACCTCCAAAAACGGTGAAAGACATACAGAGTTTTCTCGTTAATGCTGGATTTTATCGAAGATTCATCAAAGATTTCCCGAAAATAGCAAGACCACTCACTAGATTGTTATGCAGGGAGGTAGATTTTGACTTTGATGATGCAAGTCACGAAGCATTCCAATCCATCAAGAAGAAGCTAGTGAGTGCACTGATAGTACAACCACCGGATTGGGAGTTACCGTTTGAAATCATGTGTGATGCTAATGATTATGCGGTATGAGCTGTGCTAGGACAACGAAATGTTAAGAAGCTGAATGTCATCTATTACGCGAGCAGAACACTAGACGAAGCGTAAATGAATTACGCTACTACGGAGAAAGAACTTATAGCAATTGTCTTTGCTTTTGAGAAGTTTCGTCAATACCTAGTTGGTTCTAAAGTCATCGTACACACGGATCATGCGGCAGTAAGGTATATACTGGCGAAGAAAGATGCGAAGCCAAGACTATTCCGTTGGATTCTACTCCTTCAAGAGTTTGATTAAGAGATAAAGGACAAGAGAGGAATAGAGAATGGAGTAGCTGATCACCTTTCTCGGATGAGGATCACTGACGAGATCCCTATTGATGGTTCACTACCGGAGGAGAAAGTCTATGTTATTAGAGTACTTGTCGGCGAGCACAACCTCACCAAGGAGCTGAAAAGCATCAACGCTATCAAGGACAAGTCACCATGGTACGTTGACATCGTTAACAATCTCGCATGTGGAGAGAACCACCCGATCTTGTCGAATACCATAAGAAAAATTTTTACAAGGAGATAAACCGATACTATTGAGATGATCCAAACCTCTACATGTTGTGTAAAGATAAAATATACAGAAGATGTGTTCCGGAGCATGAAGTTCACGGGATTTTGATGGGATGTCATGGAGCAACATACAGAGGACATTTTGCTATATTCAAAACGGTGGCTAAAGTTTTACAAACTGAATTTTGGTGGCTGACTTTATTTAGAGACGCTCACCAATTCATCCTAGCTTGTGATGCATGTCAAAGGAAAGGAAACATATGTCAGAGAAACGAGATGCCTCAAAACTCAATAATGGAAGTAGAAGTCTTTGACGTATGGGGAATCGATTTCATGGGACCTTTCCCGAACTCTCACGGTAACAACTACATTTTCGTAGTTGTAGATTACGTATCTAAATGGGTGAAAACAATAGCATGTCTAACAAACGATGTGAAAGTAGTTCTAAAACTTTTTAAGAGCATCATATTCCCGCGTTTTAGAGTTCTGCAAGTGGTAATTAGTGACGTAGGAACGCACTTCATGAACATAACTTTCGATAAACTCCTATGGAAGCATGGCGTTTGACACAAGGTGGCGACACCATATCATCCTCAAACGAGCGGACAAGTGGAGGTTTCAAACCAGGAAATCTAAGCGATGTTGGAAAGGACGGTGAATATCTCACGAAAAGATTGGTCTCTTAAGCTAGACGAAACTTTGTGGGCTTATAGAATAACTTTCAAGACCCCCATCGGTACGACTCCTTTCAATTTTTTCTACGGAAAATCTTGTCATCTACCGGTGGAGCTCGAGTACAAAGCTATGTGGGCCGTCAAGATGCTAAACTACAATATCAAAACTGCTGCAGAGAAGCGTCTCATACAACTAAACGAAATTCGCCTAGACGCTTATGAGAATGTCTGGAAATACAAAGAGAAAACTAAAGCATTCCATGATAAAAAGATACATCGACGAGACTTTAAGGAAGATGACCAAGTTCTGCTTTTCAACTCATGCCTGAAACTTTTTCTGGGCAAGCTTTGATCTCGTTGGTCCAGACCTTTCAAAATCTCATAGCTATAGAGCTCTGGGAAACAGTGAAGAAAGCTTCAAAGTGAACGGACAACATT
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_75Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
3214Start:
2358124End:
2361337Strand:
+>Scaffold19424_LTR_75
AAAGAAAACATCGATCAAGCACATCGATCGTACGCGGTCGATGCTATACCTGGGGAAGACGAAAAAGCCATATTCTTGACGATAGAGACGGACAAATTTGAGGAGATGACTCGGAATATCTTAGAGGAGCTGACAAGCATGGCTACAACTGCTAGAGAAGAGTTCAAAGAGGTCAATAAACGGTGCAACGAGCTAGATGAAAAGTTCGAAGACTTGGTTTCAAAAATTCGGATTCTAGAGTCTCGAAAGATAAAGGAGGCACCAACAATCAATGCAATAACCTTGAAAAGTGGGAAAAAACTCAAACCGATCCCATCAAAGCAACCAATCAGCAAGAAGAGCATAGAGACTAACATCGAGGAAAAGACGATCCTCTAACAATCGAGAAGGAAAATCCCATCATATTAGAGAAAGAACCCGAAGTTGAGGAGGTCATTACGGAGAAGCTGGACGAGGATATGGAGCTCGACATTCGTACAACCAACACTCGTACAAGGGAACCTGATACTCGTGTAAGGAACCAAATGATACCCGATCTACCTAAGTATCAATCTAAAATTCCTTTTCCGGGAAAAATTAAAGGAAGAATAGCGGAGAAAATGAGGAACGCGTTTGGAGAAGAAATGAAAGGCGTAATCATCACTATGCCGATACTAGAAGTCTTGACGATGATTCCCAACGCTAGCAAGTTCCTCAAAGACCCCATGACTAAGAAGAAGAAGGAGCTCACCGAGGTGGCATTCCTAACACACGAGTGCAACGCTGTCATTCTCGACAAAAAGATTCCAAGGAAGTTAGACAAAAAGATTCACTCTCTCTTGCACTCTCGGTCAAATAACATTCGGGAGGACTTTGTGCGATCTTGGAGCTAGTGTGAACCTCATGCCTCTATCCATTGCACAAaagttggggcTTACTCGATTCAAGGAGTGTAAGACCGCTCGATAAAAACACCCGTGGGGCTTTTAGAAATTCTGGTAATGATTGGTGATTATCAAATACCGACTGATTTTGTAGTACTCAAGATGGATCACAAGCCCAAAGATCCACTTATCCTAGGGAGACCATTTCTAGGGAGCCCAAAGACACCCACGAGCCATCATCGATGTTAAAAACAGAAAGATCAACCTTCACCTAAACGATGAAGTCTTGCAGTTTAGTATCGATGAGGTgatgaagaaacCCGAAGAACGAGATCGTATTTTTTACATAGACGATCTCGACTTGCTAGCTAatggcatattAGATGAGGTTGAACCTAACGACGAGAACCTAAGTGAAGAATTCCAAACTCTACAGAATGGAGACATGGTGGACATGATACCTCGTGAGATGGCTTATGCGAGTCTAACCGAGGGTGAAGAAGAAAAGGAAGCCACGGTGAAAGCAAGCGATGGTGATACATGCAACGAAGACGATTGGAGCGAGCTcaaagcaccaAAGGTGGAGCTGAAACCACTACTGAAAAGGCTAAGGTACGCGTTTCTCGATCCTAATTCAACATTCCTGTCATAATAAGTGATGAACTAAATGACGATGAAACCTCAATGCTGCTTAATGAattaaaaaaatataggaaagccataggatattctgtagatgatatcaagggaataTCCCCATCCTTATGCATGCATAGAATACATCTAGAAGATGAATCTAAAAAGTCTATTAAACCTCAAAGACGTTTAAATCCAAATTTACTAGATATAATACGGAAAGAGATTTTTAAACTTCTAGATGCAGGTGTTATTTATCCTATTTTAGATTGTACCTGGGTTTCGCATGTTCATGTAATACCTAAAAAGGGTGGTATCACTTTGATAAAAAATAAAAACGATGAATTAATTCCTACTAGAACCATCACCGGACATATGATGTGTATTGATTTTAGAAAATTAAATGCGGCCACTAAAAAAGATCATTTTTCTCTTCCGTTTATTGATCAAATGTTAGAACGATTATCGAATCATTCTCACTATTGCTTTTTAGATGGGCATTCGGGATTTTTTCAAATCCCTATACATCCTCAAGATCAAGAAAAAACgacatttacatGTCCTTACGGTACCTTTGCTTATCGAGTAATGCCATTTGGATTATGTAATGCACCTGCAACTTTTTAAAGATGTATGATGTCAATATTTTCAGACTTAATTGAATCAGTGGTTGAAGTGTTTATGGATGATTTCTCCGTGTATGGTTCTTTGTTTGGTGGTTGTTTGTCTAATttgtgcaaggtACTTGAACGATGCGAAGAGACAAACCTCGTACTTAACTGGAAAAAGTGTCATTTCATGGTGAGAGAAGGAATcgttctcgggcATAAGATATCGGAAAGAGGGATTGAAGTCGACAAGGCCATGATCGATGTGATGACAAGTTTAGGACCTCCAAAAATGGGGAAAGCATACGAAGTTTCCTTGGTCATGCTGGGTTTTATTGAAGATTCATCAAATATTTTTCTAAGATAGCGAGACCACTCACCAGCCTACTATGCAAAGATGTTGAGTTCAACTTCGATGACGCATGTTACGAAGCATTCTGATCGACCAAGAAAGAGCTAGTGAGTGCGTCGATAGTACAACCGCTGGATTGCAAGTTATCGTTCGAGATTATGTGTGATGCTAGTGACTATGCCGTAGGAGCTATGCTTGGACAACACAAAGACAAGAAGCTAAATGGTCTCCCTATGCAAGTTGGACGCTAGACGAAGCACAAATGAATTACACCACTACGGAAAAAAAGCTTCTAGAGATCGTCTTTGCTTTTGAGAAGTTCCGCCAATACTTAGTCGGTTCTAAAGCCATTGTACACACGGATCATGCGACACTAAGGTATCTAATCGCTAAGAAGGATGCTAAACCAATGCAACTCCGCTGGATACTACTCCTTCAAGAGTTCGGTTTGGAGAAAAAAGAAAAGAAAGGAATAGAGAACGGAGTAGCGGACCACCTTTTTCGGATGAGAATCACTGACGAGATCCCTATTGACGATTCACTACCGGAGGAATAGGTCTATGCTATTAGATTACTCATTGGCAAACACAACCTCAACAAGGAGCTGAAAAGCATCAACACCATCAAAGATAAGTCACCATGGTATGCCGATATCGTGAACTACCTCGCTTGTGGAGAAAAGCCGCCCGATCTCATCGGATATCATAAGAAGAATTTTTTCAAGGTTATCAACCGGTACTATAAGGACGATCCAA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR_76Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1305Start:
3136730End:
3138034Strand:
->Scaffold19424_LTR_76
CCTGACCGTTAGTTTGAGGGTGGTAGGGAGTGGATACCTTGTGTTTCACAccattcttccttaggaggttttcaaaaatcttgttgataaagtgagaacctccatcgctaatcaccactcttggcacgccaaaccttggaaaaatgactgatttaaacatcttgaccaccactctagcatcattcgtagggcttgccaaagcctctacccatttggacacgtaatccactgcaaccaaaatgaattcattcccataagaggatgggaatggtcccatgaaatcaataccccacacatcgaaaACTTCAACTTCCAGAATGAAGTTCTGAGGCATTTCACTGCGCTTGCTGATATTCCCTTGCCTCTGACAAGCATCGCATCTAGATATTAACCGCTGAGCATCTCGGAACATCGTAGGCCACCAAAAACCCGATTGTAGaacctttgaaaccgtcttgaaagtggcaaagtggccagcatatggtgaactatggcaatgatgaaggatccctggtatctcctcttcggccacacatctcctgaatatcccatctgagcaatgcttatacaaaaagggttcatcccaaaagtacctcttaatgtctctaaggaatttccttcttttgtttcccacaaagtcttcaggctccttctcagcagctaagaagttggctatctctccaaaccagtgaaaattgggttggtgtccctttttaattgaactgaagaaacattccggagcacgtgctccgagtgggtgctcctccgggtgctcgccaacgcttccagtactgattgcataaacctcTTCACCGGGCAGACTATCATCCATAGGTATTTCTTCTTCAATATTCATCCATAGGTGTTTCTGATTGCCACGCCATTGTCAGCCCCTTTCTTGTCCTTAATCTCCAAGTCGAACTcttgcaacaataggatccatctcaaaagtctaggcttggcgtctttcttagtcagcaagtacttcaagacagcatggtctgtatgaacaatcacttttgatcccacaagatatgatctaaacttctcaaaagcgaaaataatggctagaagctccttctcggttgtggcgtatttacactgcgcctcatccatagtccgactagcgtagtagacaacatgtagcttcttgtctatcctctgtcctaacacggcccctacagcaaagtcactcgCATCTGTCATGACTTCAAAAGGCAAGTCCCAATTGGGTGGCTGAACAATCAGAGCGCTGACCAAAGCCCCCTTAATAGTGTGAAAGGCCTCTAAGCATGCATCATCGAA
Boechera stricta (v1.2)
ID:
Scaffold2004_LTR_77Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
640Start:
435End:
1074Strand:
+>Scaffold2004_LTR_77
CCAAGATTTTCGAGGAGGAACCAGAAGTCGAGGAGGTCatcatggagaAGCCAGACAAGGATAGGGAGCACGACATTCGTACTACGGAAATTCACACAGAGGAACCTGAGACTCGCATAAGGAAACAAGTGACACACAATCTCCCAAAGTATCAACCTAAAATCCCTTTTCCAGGAAGAATTAAGGGAAGAATAGCGGAGAGAATGAGGAACGCGTTCGAAGAACCAATGAAATCCGTAATCATCACCATGCTAATACTAAAAGCCTTAACGATGATTCCCAACGCTGGCATTCTTGACACACGAGTGCAGTGTCGTCATCCTCGATAAGAAGATTCCGAGAAAGCTAGATGACCCAGGCAGTTTCACTCTCTCTTGCATTCTCGGTCACATAACATTCGGGATATCTTTATGCGATCTTGGAGCTAGTGTGAATCTAATGCCCGTATCAATTCCATAAAAGTTGGGACTTACTCGATTCAAGGAGTGTAAAATGTCGCTGGTTCTCGCTGATCGCTCAGTAAAAACGCCTGTGGGATTACTTGAAGACATTCCAGTAATGATTGGTGAGTACCAAATACCAAGAGACTTTGTGGTACTCAAGATGGATCACGAGCCCATGGATCCACTTATCCTAGTGA
Boechera stricta (v1.2)
ID:
Scaffold20129_LTR_78Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
267Start:
358367End:
358633Strand:
->Scaffold20129_LTR_78
TATATAGTTTTTTAAACTATATATTATGTAAAAAATGTAGAGAAATTGGTCCAAAAGTCCAATAGAAATTTGGCCCAAAAAGAACATCTTTGTGGGCCTAAAGGCCTACATTCCCTGAGACCCGAGACCCGAGACCCGAGTCCGTCCCGACGGCGGCGGCGGTGCGTACGCGTGTGTTTTCATAACGGCCCATATCTCTCCTTCTCCATAGTGCTCCCTTAACCAAGTTAGTGAACTATGGTGTGGAAGCAACACTATTTATACTAG
Boechera stricta (v1.2)
ID:
Scaffold20129_LTR_79Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
161Start:
361623End:
361783Strand:
->Scaffold20129_LTR_79
CCCCCATAGATTCTAGGCTACCCCATATTCTTGCAATATTGCATTCATCATTTCTTTCAGAGTTCGATTTTTACGTTTTGCAACTCTGTTAGATTCTGTTGAATAAGGAGCGGTCGTCTGATGAATAATGCCTTTTTCTTGACAAAAAACAATAAACGGGC
Boechera stricta (v1.2)
ID:
Scaffold20129_LTR_80Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1312Start:
362343End:
363654Strand:
->Scaffold20129_LTR_80
TTGTCGGACTCAAAGTTAATGGCGAAACCATGCTTATTCATTGTAGTCCTGAAGATCAAGTTCTTCCTCATGTCTGGAACGTGTTttacattgttcAGAGTCAACTCCATTCCAGAAGTCATCTTGAGGACCACCTTTCCAGTGCCTTCGATCTTTGAATGAGTTACGTTACCCATCAGCAGATTTTTCTCAGATTTGCTCTTCTGGTAGGTACTGAACATGTTCCTTTCTTTGCAGATGTGAGTGGTGGCCTCGGTGTTATACCACCACTCCAATGGGTTTTCatcagccatcaCCACGTTAGCTTCTGTGATCACAGTACACAGGTCAGCTTCCGTCAGGTGGGCCTGATTCTGAGCCTTCAGTTTGTTGCGATATTCAGAAGACTTGTGGCCTGgtttaccacagTAGTTGCATTTTCCCACAAACTTTTTGTTGGGAGATGCTTGTACTTTCTTCTTAAAGCTGGTTGAAGCTTTAGGCGCAACTTTGTTAGGCACAACATGAGCTTTACCTTTTACCCTTAGGCATAACATGAGCTTTACTTTTACCCTTGTACTCAGCCACATTTGCATTATGACCTTGAACGGACTTAGCTTTGTCACGTTTCAATGACTCATTTTACAGCCTGGAGATCAAGTTCGCCAAagtcagaggctTTTGCTTGTAAGCAAGGTAGTATCAATTGTAGCTCATGAGCTTGTTCCATGATGGGTTTTGAATCCACCATTTTAAAGTTCAGAAAAGTCGTTGTAGCGaattgtccagaGCCTACATTGAAAATCTTGTACTTATTTTCCAAAGCATCCCAAAGGTACTTGGAAGTACTGACTTCACTGTAcacattgtacAGCTCGTCTACCAGGCGGTTAAGAACATGACCTTTGCAAAGGTAGTCCCCATGGATCCAAGCCTCGACACTTGCGAGAGCTAgggggtcggtgttatctcgaggcaatataggtttgacctcagtgagatatctcgacaagttcaaattgtggagaaagaaatgcatctttttctgccacgattTGAAATTTGACCCATCAAATTTTTCTGGTTGTAAGCCAGCAAATACTGTGCTCGGCACAAAAGGGACTTTAGGGGCCTCGGTTGATGCGTGTCCGAGTGGCTGACCGCTCCCAGGAAGGGGTGTCAATTCACTGGTTCTTTCAGCaccaccgtttgagctgccagCGATCTCAGTTGCGTTTGTCATTTTCTGTTCAAAAGATAGACACTTCAGTTAGTACTTAGATAGAGAATAACAAATATTAGCGTTTAAAATTTTAAATTGCTAAATCGCCAT