ID Class Order Superfamily Length Start End Strand View
Scaffold597_LTR_241 RetrotransposonsLTRLTR14132810729519+
Scaffold597_LTR_242 RetrotransposonsLTRLTR4343118190122532-
Scaffold597_LTR_243 RetrotransposonsLTRLTR13111994871199617+
Scaffold6128_LTR_244 RetrotransposonsLTRLTR2067175671961+
Scaffold6128_LTR_245 RetrotransposonsLTRLTR18987218974086+
Scaffold6773_LTR_246 RetrotransposonsLTRLTR3262607026395+
Scaffold6773_LTR_247 RetrotransposonsLTRLTR16702644028109+
Scaffold7903_LTR_248 RetrotransposonsLTRLTR245441914442158+
Scaffold7903_LTR_249 RetrotransposonsLTRLTR1409442902444310+
Scaffold7903_LTR_250 RetrotransposonsLTRLTR180444860445039+
Scaffold8169_LTR_251 RetrotransposonsLTRLTR14953741038904-
Scaffold8303_LTR_252 RetrotransposonsLTRLTR57146616+
Scaffold9638_LTR_253 RetrotransposonsLTRLTR214112165112378+

< 9 10 11 12 13 > Total 13


Boechera stricta (v1.2)

ID:

Scaffold597_LTR_241

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1413

Start:

28107  

End:

29519

Strand:

+

>Scaffold597_LTR_241

GGAAGAATTGCGGAGAGAATGAGGAATACATTTGAAGAAAAAATGAAAggtgtgatcatCACTATGCCAATACTAGAAGACTTGACGATGATTCCCAATGCTAGCAAGTTCCTCAAGGATCTCGTGACtaagaagaaaaAGGAACTAACCGAAGTGGCGTTCTTGACATACGAGTGCAGTGCCGTCATCCTCGACAAGAAGATTACAAGGAAGCTAGATGACCCAGGCAGTTTCACTCTCTCTTGCACTCTCGGTCACATaacattcgggagatctatatgcgatcttggagctagtgtgaatctaatgcctctatccattgcacaaaagttgggacttactcggttcaaggagtgtaagatgtcgttagttctcgctgatcgctcagtaaaaacgctggtgggattacTTGAAGACATTCCAGTAATGATTGGTGAATACCAAATACCGACAGACTTTATGGTACTCAAGATGGATCACGAGCCCAAAGATGCACTTATCCTAGGAAGGCCATTCCTAGCTACCTCAGGGGCCATCATCGATGTCAAGAATGGGAAGATTAACCTTCATCTAAACGATGAAGTGATGCAGTTTAGTATCGATGAGGTGATGAAGAAACCcgaaaaacgagACCGTATTTTCTACATAGATGATCTCGATTTACTAGCTAATGGAGAATGGAACGAAGTTGAGCTCAAACACAAATAAGTAAGTAAAGAATTCCAAACACTACACACTGAAAACATGACCGACATGATTCCTCGCGAGTTGACGAAGAAGAAGAAGCCGAATTTGAGAAAAGCGGCGGTGAGACTTGTGATGAAGACGATTAGAGCGAACTCAATGCACCAAAAGTGGAGTTAAAACCACTACCGAAAGGGCTAAGGTACGCATTTCTAGGGCCAAATTCAACATATCTTGTCATAATAAGTGATGAGCTTaatgatgatgaAACTTCTCTTTTACTTAATGAACTGAGAAAATATAGTAAAACAATAGGATATTCTCTAGACGATATCAAGGGCTTATCCCCATCCTTATGCATGCATAGGATACACCTAGAAGATGAATCTAATAATTCCATTGAACCTCAAAGACGtttaaatccaaATTTGCGGGATGTAGTAAGAAAAAAAATTCTTAAACTTGTAAATGTGGGTGTTATTTATCCTATTTCCGATAGTAATTGAGTTTCACCTGTTCATGTAGTGCCTAAAAAGGggggaataacTGTAGTAAAAAATGAAAATGACGAATTAATTCCAACTAGAACTATCACGGGACATAGGATGTGTATTGATTTAAGAAAATTAAATGCTGTAACTAGAAAAGATCATTTTCCTCTTCCGTTTATTGATCAAATATTAGaacgattagcaAATCACTCTCACTATTGCTTTTTAGATGGGTATT

Boechera stricta (v1.2)

ID:

Scaffold597_LTR_242

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4343

Start:

118190  

End:

122532

Strand:

-

>Scaffold597_LTR_242

GAGCTTTCCCGGAAAGAGCTTCAAACGAGAGTTGAATAATAGAACTTGATcgttttcccggaactctcttcgaagtatTCTCTTGTCATGGAATGCCTTAGTCTTCTCCTTGTATATCCGGGCATTCTGATAAGCGTCTCGGCAAATCTCGTCTAGCTTGTTCAGTTGCATTAGACGCTTCTCCGCAATGGTTTTTATGTTGTAGTTCAGCATCTTGACAGCCCAcatagctttgTATTCTAGCTCAACCGGCAAATGAAAAGACTTCCCATAAAGAAATTTGAAAGGAGTTGTACCTATGGGGGTCTTGAAAGCTTTTAGATAAGCCCACAAAGCATCATCTAGCTTAAGCGACCAATCTTTCCTTGAAATATTTACCGTCTTCTCTAAGATTGCTTTGAtttcccgatttGAAACCTCCACTTATCCGCTTGTTTGAGGATGATATGGCGTCGCCACCTTATGTCTAACGCCATGCTTTCGTAGGAGGTTATCGAAAGTCTTGTTAATGAAGTGTGTTCCTCCGTCGCTAATCACCACTCTTGgaactccaaaTCTCGGGAATATGATGCTCTTAAAAAGTTTAAGAACTACCTTCACGTCTTTTGTTAGACATGTCACAGCTTCTACCCATTTAGATACATAATCAACCGCAACTAAGATATAGTTGTTACCATGAGAGTTCGGGAAAGGTCCCATGAAATCGATGCTCCACATGTCAAAGACTTCTACTTCCATTAGCGGGTTTTGAGGCATCTCGTTCCTTCGACTTATGTTTCATCTTCTTTGACATGCATCAAAGGCTAGGATGAATCGATGAGCATCTctaaataaagtTGGCCACCAAAATCCAGCTTGTAATATAGCTACCGTTTTGAATGTAGCgaaatgtcctcCATACGTAGATCCATGGCATTCGTCAAAATCCCATATACTTTATTTTCGGGAACGCACCTTTTATAGATTTTATCCTTACATAacgtgtagaggTTTGGGTCGTCCCAATAGTATGGGTTGATCTCTTTGAAAAACTTCTTCTTATGATATCCgacgagatcagGCAGTTTCTCTCCACAAGCGAGACAGTTAACGATGTCAGCGTACCATGTGATTTATCCTTGATGGTGTTgatgctcttcaGCTCCTTGTTGAGGTAGTGCTCGCCAACAAGTACTCTAATAGCGTAAAATTGCTCTTCTAGTAGTGAATCGTCAATAGGTATCTCGTCCTCGATCCTCATCCGAGAAAGAtgatcagccactccgttttctattcctctcttgtcttttatctcCAAATCGAACTCTTGAAGAAGTAGTATCCATCGGAGTAGCCTCGGCTTCGCATCTTTCTTTGCAAGTAGAAACTTTAATGCTGCTGGTCCGTGTAAACTATGACTTTTGAGCCGACTAGGTATTGACGGAACTTCTCAAAAGCACAGACGATCGCTAGAAGCTCTTTCTCCGTAGTAACGTAATTCATTTGGGCTTCGTCTAGTACTCTACTCGCGTAATAGATGACATTTAGCTTCTTATCCTTGAGTTGTCCTAACATAGCTCCTACTGCATAATCACTAGCATCACACACAATCTCAAACGGCAATTTCCAATCCGGCGGTTGTACTATTGGTGCACTCACTAGCTCCTTCTTGATTGATCGGAATGCCTCAAAACATGCGTCATTGAAGTTGAACTCGACATCCTTGCATAGCAGGCTGGTGAGTGGTCTTGCCATGTTAGAAAAATCTTTGATGAATCTTCGATAAAAATTAGCATGACCAAGGAaacttcgtatgTCTTTCACCATTTTTGGAGGCCCTAGACTTGTCATCACATCGATCTTGGACTTCTCGACTTCAATCCCTCTTTGTGATATCTTATGTCCGAGAACAATTCCTTCTCTCACCATGAAAtgacacttctCCCAATTAAGTACGAGGTTTGACTTTTCGCATTGTTCAAGTACCTTGCACAAATTAGAcaaacaaccatCAAACGAAGAACCATACACAGAGAATTCATCCATAAACACCTCAACTACAGATTCAATTAGATCTGAAAATATCGACATCATACACCTTTGAAAGATTGCAGGTGCATTACatagtccaaacagcattcttcgataagcaaaggtaccgtaaggacatgtaaatgtcattttttcttcaatagtgagagtgatttgctaatcgttctaacatctgatcaataaacggaagaggaAAATGATATTTTCTAGTGGCAGCATTTAATTTCCTAAAATCAATACACATCCTATGTTCCGTGATAGTTCTAATAGGAATTAATTCGTCATTTTCATTTTTTACCACAGTAATACCACCCTTTTTAAGAACTACATGAACAGGtgatacccaaTTACTATCGGATATAGGATAAATAATTTCTGCATCTAGAAGTTTAAGAATTTCATTTCTTACGACATCACGCAAATTTGGGTTTAAGCGCCTCTGAAGTTCAATGGAATTCTTAGACTCATCTTCTAAATGTATTCTATGCATGCATaaggatggggatatgcccttgatatcatctaaagaatatcctatagcttttctatactttctcaattcacaaagtaaaatagaaatttcatcatcattaagttcatcACTTACTATGACAGGATATGTTGAATTAGGACCGAGAAACGCGTACCTTACCCCTTTCGGAAGTGGTTTCAACTCCACTTTCGGCGCCTTGAATTCGCTCCAATCGCCTTCATCACAAGTTTTACCATCGCTTGCTTCCTCCGTGGTTTCTTCTTCTTCGTCACCTTCGGTtagactcgcgtaagccATCTCACGAGGTATCATGTCCGCCACGTCTCCATTTTGTAGCGTTTGGAACTCTAGCTCCTCGTTTTTGAGCTCAACTTCGTCTAACACACCATCAGCCAAAAAGTCAAGATCTTCTATATAGAAAATGCGGTCTCGTTCTTTATGTTTTTTCATCACTTCGTCAATActaaactgcatAACTTCGTTGTTTAGATGAAGATTGATTTTTCTGTTTTTGACATCGATGATGGCTCCCGCGGTTGCTAGGGATGGTCTCCCTATGATGAGTGGATCTTTGGGCTcatgatccatcTTGAGTACCACAAAGTCGGTTGGAATTTGGTAGTCACTTATCATCACCGGGATGTCCTCGAGTAATCCCACCAGCGTCTTTATCGAGCGATCGGGTAGAACGAGTGACATCTTACATTCCTTGAATTTTGTAAATCCCAAAATTTATGCAATGGATAGAGGCATGATGTTCACATTAGTTCCAAGATCACATAAAGATTTCCCAAATTTTATCGGACCTATATTGCAAGAgagagtaaagcTACCCGGATCGTCTAATTTCTTCAGAATTTTCTTGTCAAGAATAACCGCGCTACACTCCTGTGTTAGGAATGCCTACCTCATTGAACTCTTTCTTCTTCTTAGTCACGAGATCTTTGAGGAACTTACTAACGTTTGGAATAATCTTCAAAGCTTCTAGTATCGGCATAGGGATGATTACACCTTTCATTTGTTGTTCAAATGCATTCCTCATTCTCTCTATTCGTCCTTTGATCCTTCCCGGAAAAGGAATCATAGGCTGATAATTGTGTATGTCGAGTGTCACCTGACTCCTTCCACGAGTattaggctcttTATCCTTATCTAGTTTCTCCTTGATAACTTACTCAATCTCGGGTTCCTCTTCAATTACGATGTGATCTTCTTTCTCGACGATAAGATCTTTTTTTCTACGGTAGGGTCTTCTTTCGCGATGATGGTCTCGTCGTTCTTTTAGTTGATCTGTTGCTTAGGTGGGATAGGTCTATGCTCCTTTCCACTCTTCAAGGTATCGCATTGATTGTTGGTGTTACCTCCAATGTCTTGGTTTCTAGTTTTTGGTCTTTAGAAACTAAATCCTCAAACTTCTTATCTAGCTCGCGCCATCTTTGAtcaatgctcgtgaatccTTTACTCACCTCTGTACCCTTGCTCGATTGTCCATCTAGAATGTTCTGAATCATCTCTTCAAGTTTGCCCGTTTCGGTTGTTAAAGAACTTGTCTCCTTGTTACCTTCAGAATATTGCATCGACCGAGTATGGTCGATGCTCTGATCGATGCATTCTTTTGTGTCGATCTTTTGGAAATACAGCGATCCCTCCTGGTCGATGGTATTGTTCTTCGGGATATTTAGACGGGGCGAAATGTTTCGCCGATTTCAGAACCTCATCTAATTTTTTGTGTAGCGCCTCCATGGTTAGCTTCTCCTCGTCTTCATGTATGTCGGCGTGTTTGTCTATTCGATCGTAGTCTCCTCCGTATTTCGCATCA

Boechera stricta (v1.2)

ID:

Scaffold597_LTR_243

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

131

Start:

1199487  

End:

1199617

Strand:

+

>Scaffold597_LTR_243

CGGGCTTGGGTCTTGGGTTTTGATGAATGAGGGATTTAGGCCCACTAAGATAATCTTTTTTTTTGGGATAAAACTTTGTGGATTTTATCAATATTTCCCTTAAAGTTTTTTTGCATAATATCTTGGATAAA

Boechera stricta (v1.2)

ID:

Scaffold6128_LTR_244

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

206

Start:

71756  

End:

71961

Strand:

+

>Scaffold6128_LTR_244

TCACGAAAAACAGCATCACCAATCCATAGAGACCGATGGTAATCCTGGagaaatcaatGAACACCAACATCGACCAGAGCGTCGACAACACATGATCGACGCGGATATATCAGGGAAGCATGTCGAGGGGCAACATCGATCAGAAGAGATTGATGCTTTTTCAGATGGAAACATTAAGCAACACCATCGACCAGGTTCGGTCGATG

Boechera stricta (v1.2)

ID:

Scaffold6128_LTR_245

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1898

Start:

72189  

End:

74086

Strand:

+

>Scaffold6128_LTR_245

GAAGTTCGACGATTTGGTTTCTAAAGTCCGAGTACTAGAAACCCAAATTGTTGAGGAAGCACCAACGATCAATGTTATAACCTTGAAGAGTGGAAAGGAGCTCAGACCGATCCCACTGAGGCAACCAATCAATAAAAAGAGGGATGAGACTATCATCGAGAAAGAAaatccgatcatTGAGAGGGAGGATCCAATACTCGAGAAAGAAGATCCCATCGTAACCGAGAACGAACAAGAGATTGAAGAAGTTATTAAGGAAAAATCAGACACGAATGGGGAACCTGATACTCGTGTGAAGAGCCAAACGATACTCGATCCACTTAAATATCAACCTAAGATCCCTTTTCTAGGAAGGATCAAAGGGAGGATAGTGGAGAGACTGAGGAATGCATTTGAACAACAGATGAAGGGCGTAATCATCACTATGCTGATACTAGAAGGTTTGACAATGATTCCCAACGCTAACAAATTCCTCAAGGATCTCGTAACTAAGAAGAAGAAGGAACTCACCGAGGTTGCGTTCCTAACACATGAATACAGCGCGGTTATCCTCGACAAAAATATTCCAAAGAAATTGGACGATCCGGACAGCTTCAATCTCTCTTGCAGTATAGGTCCAATAACATTTgggagatctcTATGTGATCTTGGAGCTAGTGTGAACCTCATACCTCCGTCCATTGCACAAAATTTGGGATTCACTACATTCAAAGAATGTAGGATGTCACTCGTTCTCGCCGATCGCTCGATAAaaacgccggttggattactcgaagacatcccggtgatgattggtgactaccaaattccaaccgactttgtggtactcaagatggaTCACCAGCCTAAAGATCCACTCATCCTAGGGAGACCATTCCTAGCAACCGTGGAGCTATCATCGATGTTAAAAACGGAAAAATCGACCTTCACCTAAACGATGAAGTAATGCAGTTTAGTATCAATGAGGTGATCAAAAAGCCTGAGAAACGAGATCGTATCTTATTCATAGATGATCTCGACTTGTTGGCTGATGGTGTGTTGGATGAAGATGAACTCGAAAACGAAGAGCTAAGTGAGGAAttccaaacgcTACCAAATGGAGACGTGGCGGACATGTACCTCGTGAGATGGCTTACGCGAGCCTAACCGATGGTGGCAAAGAAAAAGAAGCTACGGAGGAAGCAATCATGGTAAGACTTGTGATGAGGACGACTGGAGCGAACTCAAATCACCGAAAGTGGAGTTGAAACCACTTCAGAAAGGGCTAAGGTACGCATTTCTTAGGCCAAATTCAACATCTCCTGTCATAATAAGTGATGAGCTTAATGATGATGAAATTtcccttttactTTGTGAATTGAGAAAATATAGTAAAGCAATAGGATATTCCCTAGATGATATCAAAGGCATATCCCCGTCCTTATGCATGCATATAATACATTTAGAGGATAAATCTAAGAATTCTATTGAATCTCAAAGACGTTTAAATCCAAATTTGCATGACGTTTAAATCAAAAGAAATTCTGAAACTTCTAGATGCAGGTATTATTATCCTATATCAGATAGTACTTGGATCTCACCTGTtcatgttgtgcCTAAAAAAGGTGGTATCACTGTGATAAAAAATGAAAATGACGAACTAGTTCCTACTAGAACTATCACCGGGCATATGATGTGTATTGATTTTAGAAAATTAAATGCTGCCACTAGaaaagatcactTTCCTCTTCCGTTCATTGATCAAATGTTAGAAAGATTAGCGAATCACTCTCACTATTATTTTTTAGATGGGTATTCAGGATTCTTTCAAATCCCAATACATCCTTAAGATCAAGAAATAACGATATTTACATGTCCTTACGGTACCTTTTCTTATCGAAGAATGCCGTTTAGATTAT

Boechera stricta (v1.2)

ID:

Scaffold6773_LTR_246

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

326

Start:

26070  

End:

26395

Strand:

+

>Scaffold6773_LTR_246

AAGAAACTGTGGAGCTTTCTTGGGGCAAGACGCGCAACGTGGAAGGAAGTTAGTGAAGAATCTATCCGAGAGTGATGCGAACTACGGAGAAGACTACATTCGAATAGATGAACACGCCGACATATATGAAGACGAGGAGAAGCTGACCATGTAAGCGCTACACGAAAAATTAGATGAGGTTCTGAAATCGGCGAAACATTTTGCCCCGTCAAAACGTCATGAAGAACAACACCATCGACCACAGGAGGTCGATGGTCTTCCCAGCAACACCATCGAGCGGCAACATTGGGCGTACACCGTCGATGCAAATCCGGGAAAAAACATCG

Boechera stricta (v1.2)

ID:

Scaffold6773_LTR_247

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1670

Start:

26440  

End:

28109

Strand:

+

>Scaffold6773_LTR_247

AACGAGGAAGCCAAATTCTTGACGACAAAGACGGATGAATTTGAGGAGATGACTCGGAATATCTTAGAGAAGCAGACACGCATGGTTATAACTGCTGGAGAAGAGTTCAAAGAGGTCAATAACCGGTGTAACGAGCTAGCTGAGAAGTTCGAAGACTTGGTTTTAAAAATCCAGATTCTAGAAACCAGAAAGATAAAGGAGGCACCGACGATGAATGCAATAACTTTAAAGAGTGGAAAGGAGCTCATACCAATTCCACCTAAGAAACCAACAAACAAGAAGAGTGAAGAGACTAACATCGAGAAAAAAGACGATTTTATCACAACCAAGAAAGAAGAACCAATCGTCAAAAAAGAAAATCCTATAATAACCAAGAAAGAACCAGAAGTTGAAGAAGTTATTAAGGAGAAGCAGGACAAGGATATGGAGCCCGACattcgtacaaCCAACACTCGTACAAGGGAACCTGATACTCATGTAAGGAGCCAAGTGATACCCGATctacctaagtaTCAACCTAAAATTCCTTTTCCAGGAGGAATTAAAGGAAGAATAGCGGAGAGAATGAGGAATGCGTTTGAGGAACAAATGAAAGGTGTAATCATCACTATATCGATACTAGAAGCCTTGACGATGATTTCCAACACTagcaagttccTCAAGGACCTCGTGACTAAGAAGAAGAAGGAGCTCATCGAGGTGGTATTCCTAACGCACAAGTGCAGCGCCGTCATTCTCGACAAAAAGATTCCAAGGAAgttagacgatCCGGGTAGTTTCACTCTCTCTTGCACTCTCGGTCAAATAAGTGTGAACCTCATGCCTCTATCCATTGCAAAAAAGCTGCGGTTTACTCAATTCAAGGAGTGTAGGATGTCGCTAGTTCTTGCGATCGCTCGATAAAAATACCGGTGGGAATACTTGAATATATTCCGGTGATGATTGGTGAGTACCAAATACCAaccgactttgtGGTACTCAAGATGGATCACGAGCCCAAAGACCCCCTCATCCTAGGAAGACCATTCCTATCAACCATGGGAGCCATTATCGATGTTAAAAATAGAAAGATCAACCTTCACCTAAACGATGAAgttatgcagtTTAGTATTGATGAGGTGATGAAGAAACCCGAAGATCGAAATCGTATCTTCTATATAGATGATCTCGACGTACTTGCCAATGGCATATTAAATGAGGATGAACTCAATGAAGAGGAGCTAAGTAAAGAATCTCAAATGCTACAAAATGGAGAAGTAGCGGACATGATACCCTGTGAGATGGCTTACGCGAGTTTAACCGAAAATgacgaagaagAAGAAGCCACGGTAGAGGCAAGCGATGGTAAGGCTTGCGACGGAGACGATTGGAGCGAACTCAAAGCAGCGAAAGTAAAGCATAAACCACTTCCGAAAGGGCTAAGGTACGCATTTCTCGGCCCAAATTCAACATATCATGTCATAATAAGAGATGAACTAAATGATGATGAAACCTCAATGTTACTTAATGAATTCAAAAAATTTAGAAAAGACATAGGATATTCTTTAGATTATATCAAAGGAATATCCCCATCCTTATGCATGCATagaatacatttAGAAGATGAATCTAAGAATTCCATTGAACCTCAAACACGTTTAAACCCAAATTTGTGTGACACTACAAGAAAA

Boechera stricta (v1.2)

ID:

Scaffold7903_LTR_248

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

245

Start:

441914  

End:

442158

Strand:

+

>Scaffold7903_LTR_248

AGTATAAATAGTATTGCTTCCACACCATGGTTCACTAGTTTGGTTAAGGGGACACTATAGAGAAGGAGACATATGGGCCGTTATGCAAAATCACACGTGCGCCACTGCCGCCGTTGGGCTCGGTCTCGGGGAATATGGGCCTATTAGGCCCACAAAGATGTTTTTTTGGGGCCAAAAATCTATTGGATTTTTGGACCAATTTCCCTATTTTTTTGCATAATATATAGTTTAAAAACTATATACTA

Boechera stricta (v1.2)

ID:

Scaffold7903_LTR_249

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1409

Start:

442902  

End:

444310

Strand:

+

>Scaffold7903_LTR_249

ATGGCGATTTAGAAATTTAAATATTTAAACGCTAATATTTGCTGTTCTCTATCTAAGTACTGACTGAAGTGTCTCTCTTTTGAACAAAAAATGACAAACGCAACTGAGATCGCTGGCAGCTCAAATGGTGGTGCTGAAAGAACCAGTGAATTGACACCCCTTCTTGGGAGCGGCCAGCCACTCAGACAGGCATCAACCGAGGCCCCTAAAGTCCCTTCTGTGCCAAGCACAGTATTTGCTGGCTTACAACCAGAAAAATTCGATGGGCCAAATTTCAAATCGTGGCAGAAAAAGTTGCATTTCTTTATCCACAATTTGAACTTGTCGAGATATCTCACTGAGGTCAAACCAGTATTGCCTGGAGATAACATCGATCCCCTAGCTCTCGCCAGTGTCGAGGCTTGGATCCATGGGGACTACCTTTGCAAAGGTCACGTTCTTAACCGCCTGGTAGACgagctgtacaATGTGTACAGTGAAGTCAGTATTTTCAAGTACCTTTGGGATGCTTTGGAAAAGAAGTACAAGATTTTCAATGTAGGctctggacaattcgctacagcgacttttctgaacttcaaaatggtggattcaaaacccatcatggaacaagttcatgagctacaattgatatctcaaggcatagctgatgaaggaatgaagatgtgtgagacattcatagtgaattccattatcgagaagctaccgccaagttgggaggacttccagaactACCTTGCTTACAAGCAAAAGCCTCTGACTTTGGCGAACTTGATCTCCAGGTTGCAAAATGAGTCATTGAAACATGACAAAGCTATGTTCGTTTAAGGTCATAATGCAAACGTGGCTGAGTATAAGGGTAAAGGTAAAGTTCATGCTATGCCTAAGGGTAAAGGTAAAGCTCATGCTGTGCCTAACAAAGTTGCGCCTCAAGCTTCAATCAGCTTTAAGAAGAAACTACAAACATCTCCCAACAAAACTTTTGTGGGAAAATGCAACTATTGTGGTAAACCAGGCCACAAGTCTTCGGAATGTCGCAACAAATTGAAGGCTCAGAATCAGACCAACCTGACGGAAGCTGACCTGTGTGCTGTGATAACAGAAGCTAATGTGGTGATGGCTGATGAAAAACCATTGGAGTGGTGGTATGACACCGGGGCCACCACTCACATCAGCAAGGATATGAACATGTTCAGTACCCACCAGAAGAGCAAATCTGAGGAAAATCTGCTGATGGGTAACCTAACTCATTCAAAGATTGAAGGCACTGGAAATGTGGTCCTCAAGATGACTTCTGGAATGGAGTTTACTTTGAACAATGTGAAACACGTTCCAGATATGAGAAAGAACTTGATCTCCGGGACTACAATGAACAAGCATGGTTTCACCATCaactttgagtCCGACAA

Boechera stricta (v1.2)

ID:

Scaffold7903_LTR_250

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

180

Start:

444860  

End:

445039

Strand:

+

>Scaffold7903_LTR_250

GTCCGTTTAATGCTTTTTGTCAAGAAAAAGGTATTATTCATCAGACGACCGCTCCCTAttcaccagaaTCTAACGGAGTTGCAGAACGTAAAAAACGAACTCTAAAAGAAATGATATATGCAATATTGCAGGAATCTGGGGTAGCCCATAATCTATAGGGGCGAAGTTTTGCTTACCACA

Boechera stricta (v1.2)

ID:

Scaffold8169_LTR_251

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1495

Start:

37410  

End:

38904

Strand:

-

>Scaffold8169_LTR_251

CTTAGCCCTTTGGGAAGTGGTTTCAACTCCACCTTCGGTGCCTTGAGTTCgctcaaatcatCTTCATCGCAAGTCTTACCATCGCTTGCTTTCACCGTGGCTTCTTCTTCTTCGTTACCTTCGATTAGACTCGCGTATGCCATCTCACGAGGTAGCATGTCCGCCAcatctccattTTGTAGCGTTTGGAATTCTTCACTTAGTTCTTTGTTTTCGAGCTCAACTTTGTCCAACACACCATCAGTCAACAAGTCTAGATCGTCTATATAGAAGATGCGGTCTCGTTCTTCGAGTTTCTTCATCACTTCGTCAGTACTAAACTGCATAACTTCATCGTTAAGGTGAAGGTTAATCTTCTCATTCTTGACATCGATGATGGCCCCCACAGTAGCTAGGAATGGCCTTCCTAGGATAAGTGGATCCTTCGGTTCGTGATCCATCTTGAGTACTAGAAAGTCTGTCGGTATTTGGTATTCACCAATCATTACTGGAATGTTTTCAAGCAATCCCACTGGTGTTTTAACTGAGCGATCGGCGAGAACTAGCGACATCTTACACTCCTTGAACCGAGTAAGTCCCAActtttgtgcaaTGGATAGAGGCAATAGATTCACACTAGCTCCAAGATTGCATAAAGATCTCTCGAATGTTATGTGACCGAGAGTGCAAGAGAGACTGAAACTGCCTGGGTCATCTAgcttccttggaATCTTCTTGTCGAGGATGACGGCACTGCACTCGTGTGTCAAGAAAGCCACCTTGGTTAGTTCCTTTTTCTTCTTAGTTACAAGATCCTTGAGGAATTTGCTAGCGTTTGGAATCATCGTCAGGGCAACTAATATTGGTATAGTGATGATCACACCTTTCATTTGTTCTTCAAATGCATTCCTCATTCTctccgctattcttcccttaattcttcccataaaagGGATTTTAGGTTGATATTTTGGGAGATCATGTGTCACTTGTTTCCTTACGTGAGTCTCAGGTCCCTTTGTGGGAATTTTCTTAGTACAAATGTCGGGCTCCCTATCTTCGTCTGGCTTCTCCATGACGACCTCCTTGATTTCTGGTTCCTTCTCGAATATTTGGGGATTCTCTTTCTTGAATATTGGGTCTTCCTACTCGATCATGATAGGGCCGTCTTATTTTTTGATGTTAGCTCCTTCGCTTTTCTTGTTTATTGGCTGCTTAGGtggaatcggtCTGAGCTCCTTTCCACTCTTTAAGGTTATTGCTTTGACTGACAGAGACTCTTCCTGTGTTCGTGTTTCTATATTTTGGACCTTAGAGGCAAGGTCTTTGaacttctcatcTAGCTTGTTCCACTGTTGACTCATGATTGTAAACCCTTCACCGACTCTTCATCTTGAATGTTCTGAATCACCTTCTCAAGTTCGCTTGTCCCGGTTATTGAAGAACTCGTCCAAATGCTGTCTCCAGGGAAAGCGTCGATAGCCTCTGGTCGACGAGGTTGGTCGATGGCTTCCCT

Boechera stricta (v1.2)

ID:

Scaffold8303_LTR_252

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

571

Start:

46  

End:

616

Strand:

+

>Scaffold8303_LTR_252

GAAGGCCATTCCTAGCTACCGCGGGGGCCATCATCGATGTTAAAAATGGAAAGATCGATGAGGTGATGAAGAAACCCAAAAAACGAGACCGTATTTTCTACATAGATGATctcgatttacTAGCTAATGGAGAATGGGACGAAGTTGAGCTCGAATGTGAAGAATTAAGTGAAGAATTCCAAACATTACAGATTGAAGATATGACTGACGTGATTCCTTGTGAGATGGCGTGTGCAAGTCGAACCGAAAGTGACGAAGAAGAAGAAGCTGAAATAGAGGGAAACGGCGATGAGACTTGTGACGAGGACGATTGAAGCGAACTCAAGGCACCAAAAGCGGAGCTAAAATCACTCCCAAAAGGGCTAAGGTACGCATTTCTTGGACAAAGTTCAACATATCCTGTCATAATTAGtgatgagcttAATGATGATGAAACCACAATGTTACTAAATGAATTAAAAAAAATATAGGAAGGCTATATGATATATTTAGAAGATGAATATAAAAATTCTATTGAACCTCAGAGGCATTTAAATCCAAATATGCGAGATGTAGTGAAATAGCAGATTTT

Boechera stricta (v1.2)

ID:

Scaffold9638_LTR_253

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

214

Start:

112165  

End:

112378

Strand:

+

>Scaffold9638_LTR_253

CACTATAAGGTTCACTAGCTTTGGAAAGAGGACAATATGGTGTAAGAGTGACAGGCCCATTATGCATCACAACACACATGTGTGCGCGTGCACCGCCGCTGAGCCGGGCCATGGATATTGGTGAATGTGGACTTTTAAGTCCACAAAGATTATTCTTTTTGGAACAAATTTTTATTGACAATTTTGTTAATTCCTTTAAGATTTTTTGCATAAT