ID Class Order Superfamily Length Start End Strand View
Scaffold12302_LTR_21 RetrotransposonsLTRLTR1584572611574194-
Scaffold12302_LTR_22 RetrotransposonsLTRLTR873574632575504-
Scaffold12302_LTR_23 RetrotransposonsLTRLTR4289727244731532+
Scaffold12302_LTR_24 RetrotransposonsLTRLTR263211295821132213+
Scaffold124_LTR_25 RetrotransposonsLTRLTR26110194721019732-
Scaffold12722_LTR_26 RetrotransposonsLTRLTR135425469425603-
Scaffold12938_LTR_27 RetrotransposonsLTRLTR52557270677960+
Scaffold13083_LTR_28 RetrotransposonsLTRLTR711480436481146-
Scaffold13083_LTR_29 RetrotransposonsLTRLTR290491457491746-
Scaffold13083_LTR_30 RetrotransposonsLTRLTR1959813827815785-
Scaffold13083_LTR_31 RetrotransposonsLTRLTR517822313822829-
Scaffold13288_LTR_32 RetrotransposonsLTRLTR11771664417820-
Scaffold13404_LTR_33 RetrotransposonsLTRLTR321669852670172+
Scaffold14881_LTR_34 RetrotransposonsLTRLTR745137899138643+
Scaffold15089_LTR_35 RetrotransposonsLTRLTR38145605159864+
Scaffold15654_LTR_36 RetrotransposonsLTRLTR89249852249940-
Scaffold15697_LTR_37 RetrotransposonsLTRLTR212650863651074-
Scaffold15697_LTR_38 RetrotransposonsLTRLTR127931083931209+
Scaffold15697_LTR_39 RetrotransposonsLTRLTR155932856933010+
Scaffold15697_LTR_40 RetrotransposonsLTRLTR117942294942410+

< 2 3 4 5 6 > Total 13


Boechera stricta (v1.2)

ID:

Scaffold12302_LTR_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1584

Start:

572611  

End:

574194

Strand:

-

>Scaffold12302_LTR_21

TTTTAGTGGCAGCATTTAATTTCCTAAAATCAATACAGTGATACCACCCTTTTTAGGAACTACATGAACAAGTgatacccaatTACTATCGGATATAGGATAAATAATTTATGCATCTAGAAGTTTAAGAATTTTTTTTCTTACGACATCACGCAAATTTGGATTTAAGCGCCTCTGAGGTTCAATAGAATTCTTAGACTCATCTTCTAAATGTATTCTATGCATGCATAaggatggggatatgcccttgatatcatctagagaatatcctactgcttttctatattttctcaattcattaagtaaaagagaaatttcatcatcattaagctcatcacttactatgacaggatatgttgaattagaaccgagaaatgcgtaccttagccctttcggaagtggtttcaacTCCACCTTCGGTGCCTTGAGTTCGCTCCAATCATCTTCATCGCAAGTCTTTCCATCGGTTGCTTCCACCGTGGCTTCTTCTTCTTCGTCACGTTCGATTAAACTCGCGTATGCCATCTCACGAGGTAGCATGTTCGCCACGTCTCCATTTTGTAGCGTTTGGAATTCTTCATTTAGTTCTTCGTtttcgagctcaacttcgtccaacacACCATCAGCCAACAAGTCGAGATCGTCTATGTAGAAGATGCGGTCTCGTTTCTCGGGTTTTTCATCACCTCATTGATACTaaactgcattACTTCGTCGTTTAGGTGAAGGTCAATTTTTCCGTTTTTAACATCGATGATGGCTCCCACTGTTGCTAGGAATGGTCTCCCTAGGATGAGTGGATCTTTGGGCTGGTGATCcatcttgagtaccacaaagtcggttggaatttagtagtcaccaatcatcaccgggatgtcttcgagtaatccaaccggcgtttttatcgagcgattggcgagaacgagtgacatcctacattctttgaatgtagtgaatcccaacttttgtgcaatggttcacactagctccaagatcacatagagatctcccaaatgttattggacctatactgcaagagagagtgaagctgcccggatcgtccaatttctttggaatctttttgtcgagaatgcaacctCGGTGAGCTCCTTCTTCTTCTTAGTTACGAGATCCTTGAGGAATTTGCTAACTTTGGGAATCATCGTCAAAGCTTCTAGTATCGGCATAGTTATGATTACGCCGTTCATTTGTTGTTCAAATGCATTCCTCAGTCTCTCCGTTATCCTCCCTTTGATCCTTCCAGGAAAGGGGATCTTAGGTTGATATTTAAGTGGATCGGGTATCGCTTGGCTCCTTACACAAGTATCAGGTTCCCCATCTGTGTCTGATTTTTCCTTAATAACTTCTTCGATCTCTTGTTCTTCCTTGGTCACGATGGGATCTTTTTTCTCAAGTATTAGATCCTCCCTCTCAATGATCGGATTTTCTTTCTCGATGATAGTCTCATCCctctttttgttgattggttgcctCGGTGGGATCGGTCTGAGCTCCTTTCCACTCTTCAAGGTTATAGCATTGAACGTCGGTGCTTCCTCAACAGTTCGGgtttctaatacTCGG

Boechera stricta (v1.2)

ID:

Scaffold12302_LTR_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

873

Start:

574632  

End:

575504

Strand:

-

>Scaffold12302_LTR_22

ACAGCGCTCCAGAACAAACCTTCCAGATGATTCATTTGGTCACTTGAAAATCTTTTATCGAGATGAACATATCCTTGCGTTGATCTCAGAATGGCATCCAATTTTTCATGTAGCGCCTCTGTAGTCCTTATCTTTTCTTCCTCATGGGCCTTGACGTATCTGTTCATGCCATCATACTCCTCTCCATAGCTGCTGTCACTCTTGGCTAGGTTCTCCACCAATATCATTCCATGATTTGCATCTTGCCCCAAGAAGGTTCCATGGCTGGCTACATCGAGTAACATACGATATTTAGGTGTCACCCCTCTATAGAATATgcttagaaaatgctcgtcactgaacccatgatgagggcattgtctcgtgtattccataattctttctcatgcttctccgaagctctCAGTGCTTTGTTGTGTGAAGTTCGATATCTCACTCCTCCAATGAGCTGTCCTAGCATTCGAGTAGAATTTTTTTTAGGAACGCTTTTCGGCATTGACTCCACGTTGCAACGGTCTCCGatggaatgctcttttcccactgacgtgctttaccatcaagggaaaatgggaataagcgaagttttaatgcatcctcagagagaccgtttatgcgcaccATTCCGCACAGCTTGTCGAAGTGATCGAGATGATCCATAGGGTTCTCCATGATAGGTCGTGAAACTTGTCCCTTTGGACCATGTCAATCAAGTCGACTTTGATTTCGTACTTGACATCTCCCAATGGTGGTGGTCGGATTCCTGTGCGTGGGACGTAGCTTATTggctcgtcgacCATGCCTATTGATCGTACCACCTTTTGCCTACGCACCACGTTCTCTTCTCCACAGTCCAGCAACTGGTTCATTTTTTTT

Boechera stricta (v1.2)

ID:

Scaffold12302_LTR_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

4289

Start:

727244  

End:

731532

Strand:

+

>Scaffold12302_LTR_23

GGGCGACAAGGAGATGTGTCCTTTAACGACCGAGACAAGTGAAATCGAGAAGGCGATTCAGAACattctagatgGAGAAACAAGCAGAGTTGTGAGGGTCGGTAAAGAGTTTATGAATATGGATCAACATTGGAACAAGTTAGACGAGAGGTTCGAAGATTTGGTTTCTAAAGTCCAACACATAGAAACCTGAACGAAGGAAGAAACACCAACAATCAAAGCAATAACTTTAAAGAGTGAAAAGGAGCTCAGACCGATTCCACCTAAGCAACCAGTAAACAAGAAAATTGAGGAGTCTAACATTGAGAAAAAGGACGATCCtatcatgatcaagaGGGAGGAACCAATCATCGAGAAGGGAAATCCCATGATATTCGAGAAAGAAATAGAAGTCGAGGAAGTCATCACGGAGAAGCcagacgaggaTAGGGAGCCCGACATTCACACAAATGAACATGAGACTCGCGTGAGGAAACAAGTGACACACAATCTTCCAAAATACCAACCTAAAATCCCTTTTCCGGGAAGAATTAAGCGAAAAATAACAGAGAGAATGAGGAACGCATTTGAAGAACAAATGAAAGGCGTAATCATCACCATACCGATACTAGAAGCCTTGACGATGATTCCCAATGCGACCAAATTCCTCAAGGACCTCATGACTAAGAAGAAGAAGGAGTTCACCGAGGTGGCGTTCTTGACACACGAGTGCAATGTCGTCATCCTCGACAAGAAGattccaagaaAGCTAGACGACCCAGGCAGTTTCACTCTCTCTTGCACTCTTGGTCACATAACATTCGAGAGATCTTTATGCGATCTTggagctagtgtGAATCTAATGCCCCTATCCATTGCACAAAAGTTGGGGGGACTTACTCGGTTTAAGGAGTGTAAAATGTCATTAGTTCTTGCTGATCGTTCGGTAAAAACGCCGGTGGGATTACTTGACGACATTCTGGTGATGAGTGGTTACTACCAAATTCTGACCGACTTTGTGGTACTTAAGATGGATCACGAGCCCAAAGATCCACTCATCCTAGGGAGACCATTCCTagcaaccgcgggagccatcattgacgtcaaaaatggaaaaatcgaccttcatctaaacaacaaagttatgcagtttagtattggcaaagtgatgaagaaacccgaagaacgagaccgcatcttctacatagacgatcTCGACTTGTTGACTGATGGTGTGTTGGACGAAGTTGAGCTCGAAAACGAAAAACTAAGTGAATAATTCCAAACGCTACAAAATGgagacgtggcGGACATGATACCTCGTGAGATTGCTTACGCGAGTCTAACCGAAGGTGATGAAGAAGAAGAAACCACAGAGGAAGCAAGAAATGGTAAGACTTGCGATGAAGGCGATTGGAGCGAACtcaaggcgccGAAAGTGGAGTTGAAACCACTTCCGAAAGGGCTAAGGTACGCCTTTGTCGGTCCTAATTCAACATATCCTgtcatagtaaGTGATGAGCTTAATGATGATGAAATTTTTCTTTTACTAAATGAATTGAGAAAATATAGAAAAACAATAGGATATTCTCGAGATGATATCAAGGGCATATCCCCATCCTtatgcatgcaTAGAATACATTTAGAAGATGAATCTAAGAGTTCGATTGAACCTCAAAGGCGATTAAATCCAAATTTACGTGATGTCGTAAGTAAAGATATTCTTAAACTTCTAGATGCAGGTATTATTTATCCTATATCAGATAGTACttgggtctcacctggtcatgttgtacctaaaaagggtggtatcactgtggtaaaaaatGAAAATGACGAATTAATTCCTACTAGAACTATCACGGAACATAGGATGTGCATTGATTTTAGGAAATTAAATGCTACCACTAGAAAATATTATTTTCCTCTTCCATTTATTGATCAAATGTTAGAACGACTAACTAATCATTCTCATTATTGTTTTTTAGATGGGTATTCGGGATTTTTCAAATCCCGATACACCCGcaagatcaagAAAAAACGACATTTACATGTCATTACGGTATCTTTGCCTATTGAAGAATGTCGTTTGGACTATGTAATGCACCTGgaatctttcaaAGGTGTATGATGTCGATATTTTTAGATTTAATGGAATCAGTAGTTGAGCTGTTTATGGATGATTTCTCTgtgtatggttcTTCGTTTGGTGGTTGTTTGTATAATTTGTGCAAGATACTAAAACGTTGCGAACAGACGAACCTCGTACTTAATTGGGAAAAGTGTCTTTTCATGGTGAGATAAGTAATTATTCTCGGGCATAAGATATTGGAAAGAGGCATTGAAGTCGACAAGGCCAAGATCGATGTGATGACAAGTCTAGGGCCTCCaaaaacggtgaaagacatacgaaatttccttggtcatgCTAATTTTTATCGAAGATTCATCAAAGATTTTTCTAAGATAGCAAGACCATTCACCAGCCTGTTATGCAAGAATGCCGAGTTCAACTTCGATGACGCATGTTCCGAGGCATTCCGATTAATCAAGATGGAGCTAGTAAGTGCACTGATAGTACAACCGCCAGATTGGGAATTGCCTTTCGAGATTATATGTGATGCTAGCGATTATGGTGTGGGAGCTGTTCTTGGACAACGTAAAGATAAGAAGCCGAATATCATCTACTACGCGAGTAAGACGCTAGATGAAACTTAAATGAAGTATGCCACCACTGAGAAGGAGCTTCtagcgatcataTTTGCTTTTGAGAAATTCAGACAATATTTAGTCGGCTCAAAAGTCATAGTTCACACAGATCATGTGGTGCTCCGGTATTTACTCGCTAAGAAGGATGCAAAACCAAGGCTACTCCGCTGGATActactccttcaAGAGTTCGATTTGGAGATAAAAGATAAAAGAGGAATAGAGAACGGAGTAGCTGATCACCTTCCTCGAATGAGAATTACTGACGAGATCCCTATCGATAATTCACTACCAGAGGATCAAGTCTATGCTATTAGAGTACTTATCGGCGAACACAACCTCAATAAGGAGCtgaaaagcatcAACGCCATCAAGGACAAGTCACCATGGTACGCCGACATCGATAATTATCTCGTTTGTGGAAAAAACCCACCTGATCTTGTCGGATATCACAAGAAAAAGTTTTTCAAGGAGATCAATCGGTATTATTGggatgatccaaacctctacacacTATGTAAGGATAAAATATACAGAAGATGTGTTCCTGAGCATGAAGTTCGCTGGATCTTGACGGGATGCCATAGATCAACATACGAAGGATAATTCACTACATTCAAGACGGTGGCTAAAGTTTTGCAAGCTGGATTTTGGTGGCCGactttgttcaaagatgttcatcgattcatcctagcttgtgatgcatgtcaaaaaagagGAAACATAAGTCGAAGGAATGAGATGCCTCAAAACCCGATAATGGAGGTAGAAGTCTTTGATGTGTGGAATATCGATTTCATGGGACCTTTCCCGAACTCTCATGGTAACAACTACATCTCAGTGGCGGTTGATTATGTATATAAATGGGTAGAAGTTGTGGTGTGTCCAATAAACGATGCGAAGGTAGTTATGAAACTTTTTAAGAGCATCATTTtcccgcgtttTGGAGTTCCGCGAGTGGTGATTAGTGACGGAGGAACGCACTTCATTAACAAAATTATCGACAAACTCCTAAGGAAACATGGCGTTAGACACAAGGTGGCAATAACATATCATCCTCAAACAAACGGACAAGTGAAGGTTTCAAACCGGGAAATCAAAGCAAtcttggagaaGACGGTGAATATTTCACGAAAAGACTGATCGCTTAAGTTAGACGATGCTTTGTGGGCTTATCAAACAGCTTTCAAGACTTCCATTGGTACAACTCCTTTCaaccttctctaTGGAAAGTCTTGTCATTTGCTAGTTGAGCTAGAATACAAAGGTATGGGGGCCGTAAAGATGCTTAACTACGACATCAAAACCGCGGCGGAAAAACGCCTCATGCAATTGAACGAACTAGACGAGATTCGTTTAGATGCCTATGAGAATGCCCGGATATACAAGGAGAGGACAAAGACATTTCATGACAAGCGAATACTTCACAGAGAGTTTAAGGTAAACAATCAAGTATTACTATTCGATTCTCGTTTAAAGCTCTTTCCAGGAAAGCTCCGATCTCATTGGTCTGGTCCCTTCAAGATAAAGTCAGTAATGGCTTACGGAGTTATAGAGCTATGGGGCAATAGTGGAGAGAGTTTCAAGGTGAACGGACAACG

Boechera stricta (v1.2)

ID:

Scaffold12302_LTR_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

2632

Start:

1129582  

End:

1132213

Strand:

+

>Scaffold12302_LTR_24

CCAAAATATAGAAACACGAGCGCAGGAAGAGTCTCCATCAGTCAAAGCAATAACTTTGAAGAGTGGAAAGGAGGTCATACCGATTCCACCTAAGCAGCCAGTTAACAAGAAAAACGAAGGAGCTaacatcgagaaAGAAGACGGCCCTATCATGATAGAGAGGGAAGAACCAATAGTCAAGAAGGAGAATCCCAAAATGTTTGAAAAGGAACCAGAAGTCGAGGAGGTCATCATGGAGAAGCAAGACGAGGATAGGGAGCCCGACATTCGTACTACAGAAATTCCTACAATGGAACCTGAGACTCGCGTAAGGAAGCAAGTGACACACGATTTCCCAAAATATCAACCTAGAATCCTTTTTCCGGGAAGAATTAAGGGAAGAATAGTGGAGAGAATGAGGAATGCATTTGAAGaacaaatgaaaGGTGTGATCATCACTATGCCAATACTAAAAGCCTTGACGATGATTCCCATCGCTAGCAAGTTCCTCAAGGGTCTCATGACTAAGAAGAAAAAGGAACTAACCGAAGTGCCGTTCTTGACACATGAGTGCAGTGTTGTCATCCTCGACAAGAAAATTCCAAGAAAGCTAGACGACCCAGGCAGTTTTACTCTCTCTAGCACTCTCGGTCACATAACATTCGAGAGATCTTTATGCGATCTTGgagctagtgtGAATCTAATGCCCCTATCCATTGCACAAAAGTTGGGACTTATTCGATTCAAGGAGTGTAAGATTTCATTAGTTCTCGCTGATCGTTCGGTAAAAACGCCGGTGGGATTACTTGAagacattccggtgatgattggtgaCTACCAAATTCCGACCGACTTTGTGGTACTCAAGATGGATCACGAGCCCAAAGATCCTCTCATCTTAGGGAGACCATTCCTAGCAATCGCGGGAGCCATCATTGATGTCaaaaatggaaaAATCGACCTTCATCTAAACAACGAAGTAATGCAGTTTAGTATTGACGAAGTgatgaagaaaCCCGAAGAACGAGACCACATCTTGTCGGCTGATGGTGTGCTGAATGAAGTTGAGCTCAAAAACGAAGACCCAAGTGAAGAATTCCAAACGGTACAATATGGAGACGTGGGGGACATGATACCTCATGAGATGGCTTACGCAATGATGACCGTTCGTGACATAGAAGAAGCCAAGGTGGAAGCAAGCGATGGTAAGACTTGCGATGAAGATGATTGGAGCGAACtcaagacaccgaaggtggagttgaaaccacttccgaaagggctaaggtacgcatttctcggtcctaattcaacatatcctgtcatagtaagtgatgagcttaatgatgatgaaatttctcttttacttaatgaattgagaaaatatagaaaagcaataggatattctctagatgatatcaagggcatatccccatccttatgcatgcatagaatacatttagaagatgaatctaagaattcaattgaacctcaaaggcGATTAAATCCAAATTTACGTGATGTCGTAAGAAAAGAAATTCTTAAACTTGTAGATGCAGGTATTATTTATCTTATATCAGATAGTACTTGGATCTCACATGTTCATGTTGTACCTAAAAAGGgtggtatcactGTGGTAAAAAATGAAAATGATGAATTAATTCCTACTAGAACTATCACGGGACATGGATGTGTATTGATTTCAGAAAattaaatgctGCCACTAGAAAATATCATTTTCCTTTTCCGTCTATTGATCAAATGTTAGAACGATTAGCATATCACTCTCACTATTGCTTTTTAGATGGGTACTCGGGATTCTTCCAAATCCCGATACATCCTCAAGATCAAGAAAAATGATATTTTACATGTCCTTACGGTACCTTTTCCTATCGAAGAATGCCGTTTGgactatgtaatGCACCTGCAACCTTTCAAAGGAGTATGATGTCGATATTTTTAGATTTAATTAAATCAGTAGTTAAGGTGTTTATGGATGATTTTTCTGTGTATGGTTCTTAGTTTGGTGGTTGTTTGTCAAATTTGTGCAAGGTACTAAAGCGTTGCGAAGAGACGAACCTCGTActtaattgggaGAAGTGTCATTTCATGGTGAGAGAGGAATCGTTCTCGGGCATAAGATATTGAAAAGAGGGATTGAAGTCGACAAGGCCAAGATCAATGTGATCACAAGTCTAGGGCCTCCAAAAAcggtgaaagacATACGAAGTTTCCTTGGTCATGTTAATTTTTATCGAAGATTCATCAAAGATTTTCCTAAGATAGCAAGACCACTCATCAGCCTGCTATGCAAGGATGTCGAGTTCAACTTCGATGACGCAtgttccgaggcATTCCGATCAATCAAGAAAGAGCTAGTGAGTGCACCGATAGTACAACTGCCAGATTGAGAATTGCCGTTCGAGATTATGTGTGATGCTAGCGATTATGCGGTAGGAGATGTGCTTGGACAACGTAAAGATAAGAAGCTGAACTTCATATATTACTCGAGTAGGACACTAGACGAAGCGCAAATGAATTATGCCACTACAGAGAAAGAACTTCTAGCAACTGTCTTTGCTTTTGAGAAGCTCCGTCAATACTTAGTCGGTTCTAAAGTCATCGTGCACACCGACCATGTTGCACTAAATTATCT

Boechera stricta (v1.2)

ID:

Scaffold124_LTR_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

261

Start:

1019472  

End:

1019732

Strand:

-

>Scaffold124_LTR_25

TTATATAGTATATTATGCAAAAAATGTAGGGAAATTGGTCCAAAAATCCAATAGAAATTTGGTCCAAAAATCTAATAGAAATTTTGGTCCAAAAAATATAATTTTTGTGGGCCTAAAGGCCCACATTCACCAAGACTGGCCTGGCACAACGACGGCGCGTGTGTGTGTCTTTTTGCATAGCGGCCCTATCTCTCATTCTCTATAGTGTCATCCTAACCAAGCTAGTAAACCATGGTGTGGAAGCATCACTATATATACTAG

Boechera stricta (v1.2)

ID:

Scaffold12722_LTR_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

135

Start:

425469  

End:

425603

Strand:

-

>Scaffold12722_LTR_26

CCCGAGCCCGGCCCGGCTCGGCGGCGGCGGCGCGCGTGTGTGTTTTTGCATAATGGCTCATATCTCTCCTTTTCCATAGTGACCCCTTGACCAAGCTAGTAAACCATGGTGAGAAAGCAACACTATTTATACTAG

Boechera stricta (v1.2)

ID:

Scaffold12938_LTR_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

5255

Start:

72706  

End:

77960

Strand:

+

>Scaffold12938_LTR_27

ACCGGTTGCTGGACCGGGAGAATGAGAACGTGGTGTGTAGGCAAAGGGTGGTACGAACAATAGGGATGGCCGACGAGCTGACGAGCCAACAAGCCAAAATCAACGCACGGGAATCTGGCCACCACTAGTAGTCGAAGTTGAATTCGAAATCAAGATCAGCTTGattaacatggTCCAGGGTTATAAGTTTCACGGATTATCAACGGAGAAACTTATTGATCATCTGTATCAATTCGACAAGTTGTGTGAGATGGTGAAGATAGACGGTCTCTCTGAagatgcactaaaacttcgtttattcctattTTCACTTGGGGGTAAAACACAAGAGTGGGAGAAGTACATTCCATCTGAGACCGTTACAATGTGGAGTGAATGCCGGACAGCGTTCCTAACAAAGTTCTTCTCGAACCCTAGGAGAACTTGTTGGAGAAACGAGATATCAAACTTCACACAACAAAACACTGAGAGCTTGGGAGAAGCTTGGGAAAGGATTGAAAGATACACCaaggaatgtcCTCATCATGGATTCAGCGACGAGTATTTGTTGAGCATATTCTATAGAGGAATTACTCCTAAATATCGTACGTTACTTGATATAGGCAGCCACAGAACTTTCTTGGGGCAGCACGCGCAACACGGAATGACGCTGGTAAAGAACTTAGCCGAGAGCGACGCGAGCTAGGGGGAGGACTATGACTAAATGAACAGACACATCAACATCCATGAAGACGAGGAGAAGCTGACCATAAGAGCGCTACATGAAAAGTTAGACAAGTTTCTGAAATCGACGCAAAATTTCTTCTCGTCAAAACGATGTGGAGAACAACATCATTGACCAGGAGGGGTCGATGGCCTTCCTAGAAGCATCATCGAGCTTAAGCATCGATCGTACGCCTTCGATGCAACACCAGAGACTAACATCGATCAAGAACATCGATTGTACATggtcgataccTTTCACATCGGACCAGAACATCGACCATGTGTGGTCGATGCTCTTACTGAGAACAACGAGGAATCGAGTTTCTTGACGACTAAGACGGAAAAAACCGAGGGGATGATTCAGAATGTCATGGAAGGACAAACAAGCATGGTCGCAGGGATTAGTAGAGAGTTCAAGGAGGttaatcaacggtgtcacgagttagacgagaagttcgaagacttggtttgtaaggtccgaaagctagaaacccgaACAATGGAGGAAGCACCGACGATCAATGCTATAACCTTGAAGAGTGGAAAAGAGATCAGACCGATCCCACCTAGGCAACCAATCAACAAAAAAGGGAAGAGACTATCATCGTGAAAGAAAATCCGATCACCGAGAAGGAGGATCCAATCCTCGAGAAAAAAGATCCTATTGAAACCGAGGAAGGAAATGAGATTGAAGAAGTTATTAaggaaaagccGGACATGGATGGAGAGCCTAACACTCATGGAAGGAGCCAGGTGACACTCGACGTACGTAATTATCAGCCTAAGATTCTTTTTCCGGAAAGGATCAAAGGGAGAATAGCGGAGAGAATGAGGAATGCATTTGAAGAACAAATGAAAGGTGTAATCATCACTATGCCGATACTAGAAGCTTTGACGatgattcccaacgctagcaaattcctcaaggatctcgtgactaagaAAAAGAAAGAGCTCACCGAGGTAGCATTCCTAACGCACGAGTGCAGCGCAGTTATTCTCGACAAGAAAATTCCAAAGAAATTAGACGATCCGAGTAGCTTCACTCTCTCTTGCAATGTAGGTCCGATGATATTTGGGAGATCTTTATGTGACCTTGGAGCTAGTGTGaaccttatgcctctatccattgcacaaAAGTTGGGATTTACAAAATTCAAGGAATGTAGGATGTCACTCGTTCTCGCTGATCGCTCGATAAAAACGCCGGTGGAATTACTCGAAGACATTCCGGTGATGATAGGTGACTACCAAATTCCAACTGATTTTATAGTACTCAAGATGGATCACGAGCCCAAAgatccactcatCCTAGGGAGACCATTCCTAGCAACCGCATGAGCCATCATCAATGTTAAAAACGAAAAGATCAACCTTCACCTAAACGATGTAGTCATGCAGTTTAGTATCAATGAGGTGATGAAGAAACCCGAAGAACGAGATCGTATTTTCTACATAGATGATCTCGACTTGCTAGCTGATGGCATATTAGAAGAGGTTGAACCTAGCAACGAGGAGCTATGTGAAGAATTCCAAACGCTACAAAACGGAGACATGGCAGACATGATACCTCGTGAgatggcttatgCAAGTTTAACCGAAGGTGACGACGAAGAAGAAGTCATGGAGGAAACAAGCAATGGTAAGACTTGCGATGAAGACGATTGGAACAAACTCAAAGGACCGAAAGTGGAGCTGAAACCACTTCCGAAAGGGCTAAGGTACATATATCTCGGTCCTAATTCCACATATCCTGTCATAGTAAGTGATGAGCTTAATGATGatgaaatttctcttttacttaatgaattgagaaaatatagaaaagcAATAGGATATTCTCTAGATGATATCAAGGACATATCCCCATCCTTATGCACGCAAAGAATACATTTACAAGATGAATCTAAGGATTCAATTGAACCTCAAAGGCGATTAAATCTAAATTTACGTGATGTCGTAAGAAAAGAAATTCTAAAACTTCTAGATGCAGGTATTATTTTATATCATATAGTACTTGGGTCTCACCTATTCATGTTGTACCTAAAACGGGTGGTATCACTGTGGTAAAAAAATGAAAATGACGAATTAATTCTTACTAGAACTATCACAGGACATAGGATGTGTATTTATTTTAGGAAATTAAATGCTGCCACTAGAAAAGAGCATTTTCCTCTTCCATTTATTGATCAAATGttagaacgacTAGCTAATCATTCTCACTATTGTTTTTAGATGGGTATTTGGGATTCTTTCAAATCCCGATACACCCGCAAGATCAAGAAAAaacgacatttaCATGTCCTTACGGTACCTTTGCCTATCGAAGAATGTCGTTTGGGCTATGTAATGCACCTGCAACTTTTCAAAGGTGTATGATGTCGATATTTTCAGATTTAATTGAATCAATAGTtgaggtgtttatggatgattTCTCTGTGTATGGTTCTTCGTTTGGTGGTTGTTTGTCTAATTTTTGCAAGATACTAAAATGTTGCGAAGAGACGAACCTCGTActtaattgggaGAAGTGTCATTTCATGGTGAGAGGAGGAATTGTTCTCAGACATAAGATATCGGAAAGAGggattgaagtCGACAAGGCCAAGATCGATGTAATGAAAAGTCTAGGGCTTCCAAAAACAGTGAAACACATACGAAGTTTCCTTGGTCatgctaattttTATCGAAGATTCATCAAAGATATTTCTAAGATAGCATGACCGCTCGCCAGCTTGCTATGCAAGGATGTCGAGTTCAACTTCGATGATGCATGTTTCGAGGCAttccgatcaatcaagaaggagctagtgagtgcaccgatagtacaaccgccggattgggaaTTGCCGTTTGAGATTATGTGTGATGCTAGTGATTATGCGGTAGGAGCTGTACTAGGACAACGCAAGGATAAGAAGCTGAGTGTCATCTATTACGCGAGTAGAACACTAGATGAAGCGCAAATGAATTACGCTACTACGGAGAAAGAGCttctagcgatCGTCTTTGCTTTTGAGAAGTTCCGTCAATACTTAGTCGGTTCTAAAGTCATCGTTCACACGgattatgcggcGCTCCGGTATTTACTCGCTAAGAAAAATGCAAAACTAAGGCTACTCCGCTGGATTCTACTCCTTCAAGAGTTTGATTTGGAGTTAAAAGATAAGAGAGGAATAGAGAACGGAGTAGCTGATCATCTTTCTGAGAATCACTGACGAGATCCCTATTGACGATTCACAATCGGAGTAGCAAGTCTATGCTATTAGAGTGCTTGTCGGTGAGCACAACCTCAACAAGGAGCTGAAAATCATCGATTCCATCAAGGACAAATCACCATGATACACTGACATCGTCAACTATCTCGCTTGTGGAGAGAAACCACCTGATCTTGTCGGATATCACAAGAAAACGTTTTTCAAGGAGATAAACCGGTATTATTGGGATGATCCGAACCTCTACATGCTGTATAAGGATAAAATATATAGAAGATGTGTTccggagcatgAGGTTCACAGGATTTTGACGGGATGCCATGGATCAACATACGGAGGACATTTCGTTACATTCAAAACGGTGGCTAAAGTTTTACAAGCTGGATTTTGGTGGCTGACTTTGTTTACAGACGCTCACCGATTCATCCTAGCTTGTGATGCATGTGAAAGAAGAGGAAACATAAGTCGAAGGACCGAGATGCCTCAAAACCCGATAATGGAGGTAGAAGTCTTTGACGTGTGGGACATCGATTTCATGGGACCTTTCCCGAACTATCATGGTAACAACTACATCTTAGTGGCGGTTGATTATGTATCTAAATGGGtagaagctgtggcgtgtccaacaaacgatgcgaAGGTAGTTCTGAAACTTTTTAAGAGCATCATTTTCCCGCGTTTCGGAGTTTCGAGAGTGGTGATTAGCGACGGAGGAATGCACTTCATTAACAAAACTTTTGACAAACTCCTAAGGAAGCATGGCATTAGACACAAGGTGGCAACAACATAtcatcctcaaACAAGCGGACAAGTGGAGGTTTCAAACCGGGAAATCAAAGCAATCTTAGAGAAGACGGTGAATATTTCACGAAAAGACTGGTCGCTTAAGCTAGATGATGCTTTGTGGGCTTATCGAACAGCCTTCAAGACTCCCACTGGTACAACTCCTTTCAACCTTCTCTATGGAAAGTCTTGTCATTTGCCGGttgagctagaatacaaagctatgtgggctgtcaagatgttgaacTACGACATAAAAACCGCTGCGGAGAAGCGCCTAATGCAACTGAACGAGCTTGACGAGATTCGCCGAGACGCTGATGAGAACGCTCGGATATACAAGGAGAAGACTAAAGCATTCCATGACAAGAGAATACTTCGAAGAGAGTTCCGTGAAAACGATCAAGTTTTACTATTTAACTCTCGTTTGAAGCTCTTTCCGGGAAAGCTCCGATCTCGTTGGTCCAGACCCTTCAAGATAAAGTCTGTAAcgccttacggaGCTATAGAGCTATGGGGCAACAGTGGAGAGAGCTTCAAGGTGAACGGACA

Boechera stricta (v1.2)

ID:

Scaffold13083_LTR_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

711

Start:

480436  

End:

481146

Strand:

-

>Scaffold13083_LTR_28

CCCAACTTTTGTGCAATGGATAGAGGCATGAGATTCACACTGGCTTCGAGATCGCACCGAGATCTCCCGAATGTTACTTGACCGAGGGTGCAAGAGAGAGTGAAACTAtccggatcgtctaatttcctaggaatccttttatctaggatgacgacgctgcactcgtgcgttaggaatgctacctcggtcaattcctttttcttcttagtcacgatatccttgaggaacttattagcgttgggaatcatcgtaaaagcttctagagttgacatagtgatgattacaccttttatctgttcttcaaatgcgttcctcattctttctgctattcttcccttaattcttcccgcaaaagggattttaggttgatacttggGTAGATCGAGTGTCACTTGTCTCCTTATACGAGTCTCGGGTTCCTTCGTGTGATTATCCATAGTACGAATGTCGGGCTCCCTATCCTCGTCTGCCTTCTTCATAATGACTTCCTCGACTTCTGGTTCTTTCTCGAATATTATAGGATTTTCATTCTCGATGATTGGTTCTTCCTTCTCGGTTGTGATAGGATCATATTTTTTCTCGATGTTAGTCACTTCACTCTTCTTGTTTGCTAGTTGCTTAGGTGGAATTGGTCTAAGCTCCTTTCCACTCTTCAAGGTTATTGCTTTGATTGTTGGTGTCTCTTCCTTCGTTCGAGTTTCTATGTTttgg

Boechera stricta (v1.2)

ID:

Scaffold13083_LTR_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

290

Start:

491457  

End:

491746

Strand:

-

>Scaffold13083_LTR_29

CATCGACCACTCCTGATCGATGGTGTTGCTCGATGTGCTTCGCCGAGATGTCGACATCGATCAGGTGTGTTTGATGCTGCAGTCGATGTTGGTTTGCGATGCTCGTTTCTGCGGCAGCATCAACAACACACAGTCGATGTTTTTGTTCGGTTTTTTGCGTTGAGAGACCATCGACCCCCCCTGGTCGATGGTGTTGTCCTTCATGTTTCTTTGAAAAAGTGAGGGGTTGTGTTGAATTCAGAATCATGTCCATTTTCTCATGTAACGCCTTCATAGTCAGTTTCTCCTCG

Boechera stricta (v1.2)

ID:

Scaffold13083_LTR_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1959

Start:

813827  

End:

815785

Strand:

-

>Scaffold13083_LTR_30

TTTTTATTTAAACATCACACAAATTTGGATTTAAACACCTTTGAGGTTCAATTGACTTCTTAGATTTATATTCTAAATGTATTCTATGCATGCATAAGGATGGGGATATGCTCTTGATATCATTTAGAGAATATCTTATTGCTTTTCTATATCTTCTCAGTTGACCAAGTAAAAGAGAAGTTTCATCATTATTAAGCTCTTCACTTACTACGATAGGATATGTTTAGGACCAAAAATCGCATACCTTATCCCTTTCGGAAGTGGTTTCAGctccactttcgGTGCTTTGAGTTCGCTCCAATTATCTTCATCGCAGGTCTTACCATCGCTTACTTTGTCCGTGGCTTCTTCTTCTTTCTCGTTTTCGGTCAAAATTGCATAAGCCATGTCACGAGGTATCATGTCTAGCACTTCTCCATTTTGGAGTGTTTGAAGTTCTTCACTTAGCTTCTCGTTGTTGAGTTCAACCTCATCTAGCACGCCAGCAGCTCGCAAGTCGAGATCGTCTAGGTAGAAGATACGATCTCGTTCTTCGGATTTCTTTATCACTTCATCAATACTACATTGCATAACTTCATTGGTTAGATGAAGATCGATTTTTCCATTTTTAACATCGATGATGGCTCCTGCGGTTGCTAGGAATGGTCTCCCTAGGATGACTGGATCTTTGGGTTCGTCGTCCATCTTGAGTAGCACGGAATCAGTCGGAATTTGGTACTCACAGGAATGTCTTCGAATAATCCCACCGGCGAGAAAAGTGACATCCTACACTCCTTGAATTCGGTATATCCCAATTTTTGTGCAATAGATAGAGGCATGAGGTTCACACTAGCTCCAAGATCATATAAAGATATTCTGAATGTTATTGGACCTAAAGTGCAAGAGAGAGTGATACTACCCGGATCGTCTAATTTCTTCGGAATCGTTTTGTCGAAAATGACTTCGCTGCATTCGTGTGTTAGGAATGCTACCTCGGTGATCTCTTTCTTTTTCTTAGTCACGAGATCTTTGAGAAATTTTCTAGCATTGGAAATCATCATCAAAGCTTCTAGTATCGGTATAGTGATGATTACACATTTTATTTGTTGTTCAAATGCGTCCTGCATTTTTCCCACTCTTCTCCCTTTGATCCTTTATGGAAAAGGAATTTTAGGCATATAACTAGGTATGTCGAGTATCACCTGGTTCCTTACGCAAGAATTAGGCTCTCTAGCCTTATCCGGTTTCTCTTTAACAATTTCTTTAATTTCAAGCCTTTCCTCCTCAACTATGATAGGATCTTCTGTCTCGATGATAGTCTCTTCTTTCTCGATGATAGTCTCTTCTTTCTAGATGACAGTCTCTTCTCTTCTTGTTGACTGGTTGTTTAGGTGGGATTTGTCTGAGCTCATTCCCACTCTTCAAGGTTATTGCATTGATCATTGGTGCCTCCTCCATCGTTCGGGTTTCTAACTTTCGGACCTTAGAAACCAAGTCTTTGAACTTCTCATCTAGCTCGTGACACCGTTGATTAACCTCCTTGAACTCTTCATTATCCCTTGCGACCATGCTCGTCTGTCCTTCTAAGATATTCTGAACCATCTCCTCGAGTTTGTCCGTCTCAATCCTCAGAAAGCTCGCTTCCTTGTTGTTCCTAGAATGAGCATCGACCATGTACGGTCCATGTTCTTGTTCGATGTGAAAGGCATCGACCACGTATGGTCGATGTACCTGATCGATGCTCATCTTCGGTGTAGCATCAATGGCGTACAATCGATGCTTCTGCTCGACGATGTATCTTGGAGAACCATCGACCCCATCTAGTCGATGGTGGTGGTCTTCATGTTGTTTTGATGAGATGAACTGTTGGTTGATTTCAGGATTCTGTCTATCTTTTCGTGTAGTGCTTCTCTGGTCAGCTTCTCCTCGTCTTCATGGATGTCGACGTGTCTGTTCATTCGATCGTAGTCCTCTCCATAG

Boechera stricta (v1.2)

ID:

Scaffold13083_LTR_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

517

Start:

822313  

End:

822829

Strand:

-

>Scaffold13083_LTR_31

AGCTTGCGTCACTCTCGGCTAGATTCTCCACTAAAGTCATTCTATACTGCGCGTAATGCCCCAAGAAAGTTTCGAAGCTGCCTCTATCGAATAACGTATGATATTTAGGAGTCACTCCTCTGTAGAATATGCTCAGCAAAGACCCGTCGCTGAATCCATGATGAGGACATTGCATGGCGTATCCTACAATCCTCTCCCACGCTTCTCCGAAGCTCTCACTGCTTCGTGTGAAATTTGATATCTCGTTTCTCCAACGAACTGTCCTAGAGTTCGAGTAGAACTTTGTAAGGAATAATTTTTGGCATTTACTCCACGTTGTCACGGTCTCCGATGGAATGTGATTCTCCCACTAATGTGCTTTACCCCCAAGTGAAAATGGGATTAAACGAAGTTTTAGTGCATTTTCAGAGACACCGTTGTTTTTACCAATTCGTATAACTTGTTGAATTGATTCAGATGATCCATAGGGTTTTCCGTTGATAGACAACGGATCATGTTAATCAAGCTGATCTTGGTT

Boechera stricta (v1.2)

ID:

Scaffold13288_LTR_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1177

Start:

16644  

End:

17820

Strand:

-

>Scaffold13288_LTR_32

TTCAATTAGACTCGCGTATGCCATCTCACGAGGTAGCAAGTCCGCCACGTCTCCATTTTGTAGCGTTTggaattcttcACTTAGTTCTTCATTTTCGAGCTCAACTTTGTCCAACATCGTCCAAGACACCATCAGTCAACAAATCGAGATCGTCTATGTAGAAGATGCGGTCTTATTCTTCCGGTTTCTTCATCACTTTGTCAATACTAAACTGCATAACTTCATCGTTAAGGtgaaggttaatCTTCCCATTCTTGACATCGATGATGGGCCCCGCAGTAGCTAGGAATGACCTTCCTAGGATAAGTGGATCCTGGGGTTCGTGATCCATCTTGAGTACTACAAAGTCTGTCGGTATTTGCTTTTCACCACTCATTTTTGGAATGTCTTCAAGCAATCCCACTGGCGTTTTAACTGACCGATCGGCGTGAACTAACGACATCTTACACTCCTTGaaccgagtaaGTCCCAACTTTTGTGCAATGGATAGACGCATTAGATTCACACTAGCTCTAAGATCGCATAAAGATCTCATGAATGTTATGTGACCGAGACTGCAAGAGAGAGTGAAACTGCCTGGGTcatctagcttcCTTGGAATCTTCTTGTCGAGGATGATGACACTGCACTCGTGTGTCAAGAAAGCCACTTCGGTTAGTTCCTTTTTTTCTTAGTTACAAGATCCTTGAGGAACTTGCTAGCGTTTGGAATCATCGTCAGGGCTTCTAGTATTATCATAGTGATGATCACACCTTTTATTTGTTCTTCAAATGCATTCCTCATTCTCTCCGCTATTCTTCCCTTAATtcttcccggaaaagggattTTAGGTTGATATTTTGGGAGATCATGTGTCACTTGTTTCCTTACGCGAGTTTCAGGTCCCTTTGTGGGAATTTCCGTAGTATGAATGTCGGGCTCCCTATCTTCGTCTGGCTTCTCCATGATGACCTCCTCAATTTCTGGTTCCTTCTCAAATATCTGTGGATTCTCTTTCTCGACTATTAGTTCTTCCCTCTCGATCATGATAGGGTTGTCTTTTTTTTCGATGTTAGCTCCTTCGCTTTtcttgtttatTGGCTGCTTAGGTGGAATCGGTCTGATCTCCTTTCCGCTCTTCAAGGTTATTGCTTTGACTGATGGAGACTCTTCCTATGTTCGTGTTTCTATATTTTGG

Boechera stricta (v1.2)

ID:

Scaffold13404_LTR_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

321

Start:

669852  

End:

670172

Strand:

+

>Scaffold13404_LTR_33

AAGAGAAAAGTTCCAAGGTCTATAAACGGAGAGCCATATAGAACATATGAATCACTTTGACAAGTTGTGTGGGATGGTACAcataaacggtcTCTCTGAAGATGCACTAAAACTGCGTTTATTTCTCTTTTCACTTGAGGGTGAAACACATCAGTGGGAAAAGAACATTCCATCGGAGACTGTTACGACGTGGAGTCAATGCCGGAAAGCATTCCTGAAAAATTTCTACTCGAATGTTATGACAGCTTTTTGGAGAAACAAGATATCAAATTTCACACAACAAAGCACCGAGAGCTTTGGAGAGGCGTGGGAGAGACTTGT

Boechera stricta (v1.2)

ID:

Scaffold14881_LTR_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

745

Start:

137899  

End:

138643

Strand:

+

>Scaffold14881_LTR_34

GTACACATGAACGGTCTCTCTGAAGACGCCCTAAAGTTGTGTTTATTCCCATTTGCGCTTGGGGGTGAAGCACATCAGTGGGAGTAAATATTCCATCGGAGACCGTTAAGACGTGGAGTCAATGCCGGAAAGCATTCCTAAAGAGATTCTACTCGAGCGCAAGGACAACTTATTGGAGAAACAAGATATCAAACTTCACACAACGAAGCATTGAGAGTTTCGGAGAAGCGTGAGAAAGGATTGTAGAATACACCAAAGAATGCCCTCATCacggatttggCGACGAGTCCTTGCTGAGCATATTTTACAGAGGAATTACTCCTAAGTATCGTATGTTACTCGACGTAGGTAGCCGCAGAACTTTCTTGGGGCAAGACGTACATCACGGAAGGACATTAGTGAAGAACCTAGCCGTGAGTGTCGCGAACTATAGAGAGGACTATGATCGAATAAACAAACACGCCGACATCCATGAAGCCGAGGAGAAGCAGACCATGGAGGCATTGCACGAAAAAATAGACAAGTTTCTGAAGTCGACGCAACATTTCACTTCAACAAAATAACACGAAGAACAACCACATCGACCATGGGAGATTGATGGTTCTCCAGGAAGAAACATTGAGCATATGCATCGACCATACCAGGTTGATGCTCTACCCATCGAGCCACTCCATCGAGCACAAGCCATCGATGTGATTCTAGAAGGACACATTGAGCATACACATCGACCAAGATTGGTCGATGT

Boechera stricta (v1.2)

ID:

Scaffold15089_LTR_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

3814

Start:

56051  

End:

59864

Strand:

+

>Scaffold15089_LTR_35

GGACCAGTTGCTGGACTGGATGGACGAAAATTGGATGCATAGGCCAAAGGCTACACGAATGATAAGCATGGCCGGCGAGCCAACAAGCCACGGCAATTGCAAAGGCATCCAACCACCACCCGTGGGAGATGTCGAGTTCAAAATCAAGATCAGCTTGATTAAAATGATCCAGGGTGACAAATTTCACAGTTTATCAACAGAGAACCCTATGGATCATCTAAATCAATTCGACAAGTTGTGCGACTTGGTGAGAATAACCGTTCTCTCTGAAGATGCGCTAAAACTTCGATTATTCCCAGTTTCACTTAGGGGTAAAGCACAAGAGTGGGAGAAGTACATTCCATCTGAGACCGTTACAACATGGAGTGAATGTCGGAAAGCGTTCCTAACAAATTTCTATTCAAACGGTAGGACAGCTCATTAGAGAAACAAGATATCAAACTTCGCAGAACAAAGCACTAAGAGCTTCGGAGAAGCGTGGGAAAGTGACTCCTGAGTATCGTATTTAGGAAAGTGACTCCTGAGCTCACGAATTTGGCAATGAGTCCTTGCTGAGCATATTTTACCGGGGAGTGACTCCTGAGTATCGTACGTTACTCGATGTAGGAAGTTGGGAAATTTTCTTGGGCCATGACGCGCAACGTGGAAGGACGTTAGTGGAGAATCTAGCCGAGAGTGACGCGAACTACGATCGAATAGACAAACACGCCGACATCCACGAAGATGAGGAGAAGCTGAAATTGATGCAATATTTTGTTCCATCAAAAACAATATACAGAACAACACCGTCGACCAGGATGGGTCGACGGCTTTCAAAGGAGGACCGTCGAGCAGGAGCATCGATTGTACGACATCAACGCAACACAGGAAGCAAACATCGACCAGCTATATCGAGCATACCACGTCGacgcaactaaAACCGGACATGAACATCGACCGTACATGGTTGATGCTCAGTCCAAAAATAGCGAGGAGACAAGTTTCTTGACGGCTAAAACGGGCAAACTCGAGGAGATAGTTCAGGATGTTTTCGGAGAACAGACAAGCATGGTTACAAGGGGTAGTGAAGACTTCAAGGAGGTTAATAACCGGTGTCATGAGTTAGATGAGAAGTTCGAAGACTTGGTTTCtaaggtccacAAACTAGAAACCAAGACATTGGAGGTAACACCAACAATCAAAGCGATAACCTTGAAGAGTGGAAATGAGTTAAGACCGATCCCACCTAAGCAACCGATCAACAAAAAGAACAACGAGACTATCATTGAGAAACAAAATCCGATCATCGAGAAGGAAAACCCAATCCTCGAGAAGGAAGATCCCAGTGAAATTGAGGAAGAGCCTGAGATTAAAGAAATTATTAAGGAGAAACCGGACACGGATGGAGAACCTAACACTCGTGTAAGGAGTAAGGAGACACTCGACTTACGTAATTATCAGCCTAAGATTTTCGGGAAGAATCATAGGGAGAATAGCGGAAAGGATGAGGAATGCATTTGAACAACCAATGAAAGGTCTAATCATTACTATGCTGATACTAGAAGCCTTGACGATGATTCAAAACGCTAGCAAATTCCTCAAAGATCTCGTGACTAAGAAGAAGAAAGAGCTCACCGAGGTGGCATTCCTGACGCACTAGTGCAGCGCCGTCATTCTCGACAAAAAGATTTCAAGGAAGTTAGACGATCCGGGTAGTTTCACTCTCTCTTGTACACTCGGTCAAGTAACATTCGAGAGATCTTTATGTGATCTCGGAGCTAGTGTGAATCTCATGTCTCTATCCATTGCTCGTTCTTGCCGATCACTCGATAAAAATGCTGGTGGGATTACTCAAAGACATTCGGGTGATGATTGGTGAGTACCAAATTCCGACTGATTTCGTGGTactcaagatgGATCACGAGCCCAAAGATCCACTCATACTAGGAAGACCATTCCTAGCAACCGCGGGAGCGATCATCGATGTTAAAAACAGAAAAATCAACCTTCACCTAAACAACAAATTCATGCAGTTTAGTATTGATGAGGTGATGAAGAAATCCGAAGAGCGAGATCGTATCTTCTACCTAGACGATCTCGACTTGCTAACTGATGGTGTATTAGACGAAGTTGAACTAAACAACGAGGAGCTAAGTGAAGAATTCCAAACGATACAAAACAGAAAAGTGGCGGACATGATACCTCGTGAGATGGCTTATTCAAGATTGACTGAAAACGACGAAGAAGAAGCCGCAGAGGAAGCAAGCGATGGTAAGACTTGCGATGGAAACGATTGGAGCAAACTCAAGGCACCAAAAGTGGAGCTGAAACAACTTCCAAAAGGGCTAAGGTAAGCGTTTCTCGGTCCACATTCAACATATCCTGTCATAGTAAGTGATGAACTTAATGATGATGAAATGTCTCTTTTACTTTGTGAATTGAGAAAATATAGAAAGGCCAAAGGATATTTTTTAGATGATATCAAAGGAATATCCCCATCCTTATGCATGCATATAATACATTTAGAAGATGAATCTAAGaattccattgaACCTCAAAGACGTTTAAATCTAAATATGCGTGAAGTCGTAAAAAATGAAATTCTTAAATTTCTAGATGCAGGAATTATTTATCCTATATCCGATAGTACTTGGGTATCACCTGTTCATGTAGTTCCCAAAAAGGGTGGCATTACTATGATAAAGAACGAAAATGTTGAATTGATTCCTACTAGAATTATCACTGGACATAAGATGTATATTGATTTTAGAAAATTAAATGTTGCCACTTGAAAAGACCATTTGACCAAATGTTAGAATGGTTAGCTAATCATTCTCACTATTGCTTTTAAGATGGATATCCGAGATTCTTTCAAATCCCGATACACCCGCAAGATCAAGAAAAAAACGATATTTACATGTCCTTACGGTACCTTTGTTTATCGAAGAATGCCGTTTGGACTATGTAAtgcacctgcaaCCTTTCAAAGGTGTATGATGTCGATATTTTAAGATTTAATTGAATCAGTAGTTGAGATGTTTATGGATGATTTCTCTGTGTATGGTTCTTcgtttggtggTTGTTTGTCTAATTTGTGCAAGGTACTTAAACGTTACGAAGAGACCAACCTCGTACTTAATTGGAAGAAGTGCCATTTCATGGTGAAAGAAGGAACCGTTCTTGGGCACAAAATTTCAGAAAGAGGAATCGAAGTTGACAAGGCTAAAATCGATGTCATGACAAGCTTAGAACCTCCAAAAACGGTGAAGGACATACGAAGCTTCCTTGGTCACGCTGGGTTTTATCGGAGATTCATCAAAGAGTTTTCTAAGATAGCTCGGCCACTCACCAGCCTACTATGCAAGGATGTCGAGTTCAACTTTGATGACACATGTTTCGAGGCATTCAGATTAATCAAGAAAGAGCTAGTGAGTGCACCGATAGTACAACCACCGGATAGGGAGTTACCGTTCGAGATTATGTGCGATGCTAGTGACTATGTTGGAGGAGTTGTGCTAGGACAACGCAAGGATAAAAACCTGAATGTAATCTATTACGTGAGTAGAACGCTAGACGGGGCGCAAATGAATTAAGCTACCACCGAGAAGGAGCTTTTAGCGATCGTGTTTGCTTTTGAGAAGTTTCGGCAATACTTAATCGGTTCTAAAGTTATCGTGCACACGGATCATGTGGCTCTACGGTATTTACTAGCTAAGAAGGATGCAAAACCAAGACTACCCCGCTGGATACTACTCCTTCAAGAGTTCGATTTGGAGATAAATTATAAGAGAGGAATAGAGAACAAAGTAGCTGATCTCCTTTCTCGGATGATGAT

Boechera stricta (v1.2)

ID:

Scaffold15654_LTR_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

89

Start:

249852  

End:

249940

Strand:

-

>Scaffold15654_LTR_36

CCCCATAAACTCTGTGGTGCACCAGAATTGTTTCACATAGAGTTCATCATTTCTTTAAGTTTTTGGTTTTTCCGTTCAGCGACTCCATT

Boechera stricta (v1.2)

ID:

Scaffold15697_LTR_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

212

Start:

650863  

End:

651074

Strand:

-

>Scaffold15697_LTR_37

ATTATGCAAAAAAATTTAAGAGAAAATTAACAAAAATGTTAATAGAAAATTGTCCCAAAAAAAAATAATCTTTGTGGACCCAAACCTATTGCCTGCCTTGGCAGCGGCGACGCACTCATAGTTTTGCATAATGACCCTCTCATTTTTACACCATAATGTCCTCTTCTCAAATCTAGTGAACCTTCCAGTGAGTTCTTCACTATTTATACTAG

Boechera stricta (v1.2)

ID:

Scaffold15697_LTR_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

127

Start:

931083  

End:

931209

Strand:

+

>Scaffold15697_LTR_38

CGGACTTGGGCCGTGGATCTTGATGAATGTCCGATTTAGGTCCACTAAGATTATTTTTTTGGGATAAAAATTTGTTGATTTTATCAATATTTCCCTTAAAGATTttttgcataatatcttggATAAA

Boechera stricta (v1.2)

ID:

Scaffold15697_LTR_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

155

Start:

932856  

End:

933010

Strand:

+

>Scaffold15697_LTR_39

TTTAATGCATTTTGTCAAGAACATGCATTATCCATCAAACAACTGCTCCTTACTCACCAGAATCTAATGGAGTTGCGGAAAGGAAAAACCGAACTCTAAAAGAAATGATGAATGCAACGTTGCAGGAATCTGGGTTACCTCAGAACATGTGGGGG

Boechera stricta (v1.2)

ID:

Scaffold15697_LTR_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

117

Start:

942294  

End:

942410

Strand:

+

>Scaffold15697_LTR_40

CTTGGGTCTTGATAAATGTGGGATTTAGGCCCACTAAGATAATCTTTTTTGGGATAAAAATTtgttgattttATCAATATTTCCCTTAAAGATTTGTTGCATAATATCTTGGATAAA