ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Cassandra_41 RetrotransposonsLTRLTR-Cassandra3201487906814879387-
ChrB01_LTR-Cassandra_42 RetrotransposonsLTRLTR-Cassandra1111487940214879512-
ChrB01_LTR-Cassandra_43 RetrotransposonsLTRLTR-Cassandra3481487951514879862-
ChrB01_LTR-Cassandra_44 RetrotransposonsLTRLTR-Cassandra3491686096716861315-
ChrB01_LTR-Cassandra_45 RetrotransposonsLTRLTR-Cassandra911686133816861428-
ChrB01_LTR-Cassandra_46 RetrotransposonsLTRLTR-Cassandra3381686142916861766-
ChrB01_LTR-Cassandra_47 RetrotransposonsLTRLTR-Cassandra1121686176816861879-
ChrB01_LTR-Cassandra_48 RetrotransposonsLTRLTR-Cassandra2371686188016862116-
ChrB01_LTR-Cassandra_49 RetrotransposonsLTRLTR-Cassandra3521965224219652593-
ChrB01_LTR-Cassandra_50 RetrotransposonsLTRLTR-Cassandra3292047026520470593-
ChrB01_LTR-Cassandra_51 RetrotransposonsLTRLTR-Cassandra3442118344921183792-
ChrB01_LTR-Cassandra_52 RetrotransposonsLTRLTR-Cassandra3292118389721184225-
ChrB01_LTR-Cassandra_53 RetrotransposonsLTRLTR-Cassandra3432118432321184665-
ChrB01_LTR-Cassandra_54 RetrotransposonsLTRLTR-Cassandra3302373594923736278-
ChrB01_LTR-Cassandra_55 RetrotransposonsLTRLTR-Cassandra3302373640623736735-
ChrB01_LTR-Cassandra_56 RetrotransposonsLTRLTR-Cassandra3482566153925661886-
ChrB01_LTR-Cassandra_57 RetrotransposonsLTRLTR-Cassandra3372568394425684280+
ChrB01_LTR-Cassandra_58 RetrotransposonsLTRLTR-Cassandra2152741660327416817-
ChrB01_LTR-Cassandra_59 RetrotransposonsLTRLTR-Cassandra1142741683227416945-
ChrB01_LTR-Cassandra_60 RetrotransposonsLTRLTR-Cassandra2192741702327417241-

< 3 4 5 6 7 > Total 164


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

320

Start:

14879068  

End:

14879387

Strand:

-

>ChrB01_LTR-Cassandra_41

TGTAACGCCGCCACCGTCCACAGTTAATGGGCCTCCCACGTCCGCTCTCTCGGCCCATGGCCCCATCCCGTGCGATGGGCAGTGCATTAATTTTTTGGAGGCTCGAAAGTCTTGTTTGCAAATCCTGCAATCACCGCATGACCTTGTTTAGGTCTCACTTGCAAGGTATCGCGAACCGCTTCCCGATAGGTCATCCATCTTTTCACTACTCCAGCTAAAGTACCCTTAAAGTTTCTTTATGAATGTGTGCCCGAAAAGATAAGTTTACTTTGGTGACATAGGTGGCTAAATCAGTTCTTTTAAACCTTTCCATATACCAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

14879402  

End:

14879512

Strand:

-

>ChrB01_LTR-Cassandra_42

ATTCACCCCCTTTCAAAGAACGCAACATCTTCGTTGCGCTCCAAGATAGTTACCTATATTAGTGTGATCCCTCACTGACTCCATACTTGTAAGGGTTTGGCTTTGATACCA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

14879515  

End:

14879862

Strand:

-

>ChrB01_LTR-Cassandra_43

TGTAACGGCCCGACCGTCCATTGCTAATGGGTCTCCCACGCCCGCTCTCTCGGCCTGCAGGCCCATCCCGTGCAACGGGTGGTGCGCTAATTTTTTGAAGGCTCGAAAGTTTTGTTTACTGACCCTGCAATCACCACATGAACTTTTCCCGTGCTTTGGCCTCATTTGCACGGTATCGCGAATAACTTCCCGATGAGTCATCCATCCTTTCAATAATCCAGCCTAAACACAGTTAACTATGGAGTTCTAAACGGATGTATACCTTAAAAGGTAAATGCATTTGGATGATATAGATAGTCAAATAAATTCTCTTAAACATTTCCATATAGCACAAACCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

16860967  

End:

16861315

Strand:

-

>ChrB01_LTR-Cassandra_44

TGTAACGCCCCAACCACCTATGGCTAATGGGACACTCATGCCCTCTCACTCGGTCCATGGATCTCATGCCATTCGACGGGTGGTGTGTTAGTTTTTCCAAGGTCTGAAAGTCTCGTTTACTGATTCTACAATTACCACATGACCTTTTATCGTGTTTTGGCCTCAGTCATACGATATCACGAGTCACTTCCCGATAGATCACCTATTCTTAGACTACTCCAGCTCAAACATGCTTAACTCTGGAGTTCTAAATGGACGTGCTCCCGAAAAGATAAATGCACTTTGGTAACATAGGTAGCCAAATCAATTATCTTAAGCCTTTACGTATTCCACAAACTGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

91

Start:

16861338  

End:

16861428

Strand:

-

>ChrB01_LTR-Cassandra_45

CAACGTCCCTGTTTCGCGCAAAGATCGTTACCCATGTTTGTGCAAACCCTCACTGACTCCACACTTGTTTAGGTTTGGTTCTGATACCACT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

338

Start:

16861429  

End:

16861766

Strand:

-

>ChrB01_LTR-Cassandra_46

TGTAACGCTCCGGCCACACACGGCTAATGGGCCACCCACACCGCTCTCTCAGCCTGTGGGCCCATCCCGTTTGATGTGCGGTGCATTAATTTTGCGAAGATTCGAAATCATTGACACTGCAATCACCACATGACCTTTCCCTGTGCTTTAGCCTCACTTGCACGATATCACGAATAACTTCCCGATATGTCACCCATCCTTCCACTACTTCAGATCAAGCATGCTTAACTCTAGAGTTCTAAACGGATGTGTGCCGGAAAATTTTAGCGCACTTTGGTGACATAGGTGTCCAAATCAAGTGTTTTAAACCTTTCCATATACCTAAATCGGGATGTTAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

16861768  

End:

16861879

Strand:

-

>ChrB01_LTR-Cassandra_47

ATTCACCCCTCTCAAAGAACCCATCATCCTCGTTGTGCCCCATGATCATTACCTATGTTAGTGTGAGCCCTCACTGACTCTACACTCGTGTGGGTTCGGCTATGATACCATT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

237

Start:

16861880  

End:

16862116

Strand:

-

>ChrB01_LTR-Cassandra_48

TGTAATGCCCCGACTGCCCACGGATAATGGGACACCCACGCCCGCTCAGTCGGCCCGTGGGCTCCTTCCCATCTGACAGGCGGTGTGTTAATTTTTCCAAGGCCCGGAAGTCTTGTTTACTGACCCTGCTATCACCACATGACCTTAACCCGTGCTTTGGCCTCACTCGCACAGTATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCCACTACTCCAGCCCAAGCACGCTTAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

352

Start:

19652242  

End:

19652593

Strand:

-

>ChrB01_LTR-Cassandra_49

TATAACGCCCCGACCCGTCCACGGCTAATGGGCAATCCACGCCCACTCACTCGGCCCGTGGGCCCCATCCCGTCCGACGATCGGCCGTTAATTTTCATTTGAAGACTCCAAATCACTGTTTACTGACCCTGCAATCACCACCCGACCTTTTCCCGTGCTTTGGCCTCACTAGCACGCTATCGCGAATCACTTCCCGATAGATCACCAATCCTTCCACTACTCCAGCTCAAGCACGCTTAACTCTAGAGTTCTTTCTCGATGTGCTCCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCAAATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

329

Start:

20470265  

End:

20470593

Strand:

-

>ChrB01_LTR-Cassandra_50

TATAACGCTCCGACCGCCCACGGCTAATGGGCCACCCACGCCCGCTCACTCGGCCCGTGGGCCCCATCCCATCCGACGGTCGGTCGTTAATAATTCCGAAAGGCTCGAAATCAATTTTTACCGACCCTGCAATCACCACCCGACCTTTCCCCGTGCTTTGGCCTTACTCGCACGCTATCGGGAATCACTTCCCGATAGGTCACCCATCCTTCCACTACTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTTTCCGGATGTGCTCTGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTTTACAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

344

Start:

21183449  

End:

21183792

Strand:

-

>ChrB01_LTR-Cassandra_51

TATAACGCCCCGACCGCCCACGGCTAATGGGCCACCCACGCCCGCTCTCTCGGCCCGTGGGCCCCATCCCATCCGACGGTCGGTCGTTAAATTTCTGAAAGGCTCGAAATCATTGTTTACTAACCCTGCAATCACCACCCGACCTTTCCCCGTGCTTTGGCCTCACTCACACGCATTCTCGCCGTACTTCCGATATGTCACCCATCCTTCCACTACTCCAGCTCAAGCACGCTTAACTCGAGTTCTTCGTGATGTGCTCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGTATTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

329

Start:

21183897  

End:

21184225

Strand:

-

>ChrB01_LTR-Cassandra_52

CGGCCGCCAGCGGCTAATGGGCCACCCACGCCGCTCTCTCGGCCCGTGGGCCCCATCCCATCCGACGGTCGGTCGTTAAATTCTGGAAGGCTCAAATCATTGTTTACTAACCCCGCAATCACCACCGACCTTTCCCGTGCTTTGGCCTCACTCTGCGCTATCGCAAATTACTTCCGATATGTCACCCATCCTTCCACTACTCCAGCTCAAGCACGCTTAACTCGAGTTCTTCGTGATGTGCTCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGTATTTCCACATATCACAACTTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

343

Start:

21184323  

End:

21184665

Strand:

-

>ChrB01_LTR-Cassandra_53

TATAGCGCCCGACCGCCCACGGCTAATGGGCCACCCACGCCCGCTCTCTCGGCCCGTGGGCCCCATCCCATCCGACGGTCGGTCGTTAAATTTCTGGAAGGCTCGAAATCATTGTTTACTAACCCTGCAATCACCACCCGACCTTTCCCCGTGCTTTGGCCTCACTCTGCGCTATCGCGAATTACTTCCGATATGTCACCCATCCTTCCACTACTCCAGCTCAAGCACGCTTAACTCGAGTTCTTCGTGATGTGCTCCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCATTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

330

Start:

23735949  

End:

23736278

Strand:

-

>ChrB01_LTR-Cassandra_54

TGTAACGCCCCTACCCGCCTAAGGCTAATGGGCCACCCACGCCAGCTCTCTCGGCCCATGGGCCCCATCCTATCTGACGGTCGGTCGTTAATAATTTCAAAAGGTTCAAAATCATTGTTTACTGACCCTGCAATCACCATCCAACATTTTTCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCCACTACTCCAACTCAAGCACGCTTAACTCTGGAGTTATTTCTGGATGTGCTCCGGAAAAGGTAAATCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

330

Start:

23736406  

End:

23736735

Strand:

-

>ChrB01_LTR-Cassandra_55

TGTAACGCCCCGACCCGCATACGGCTAATGGGCCACCCACACCCGCTCTCTCGGCCCGTGGGCCTCATCCCATCCGACGGACGGTTGTTAATAATTCCGAAAGGCTCGAAATCATTGTTTACTGGCCCTGCAATCACCACCCAACCTTTTTCCGTGCTTTGGCCTCACTCGCACGCTATGGCGAATCACTTCCCAATAGGTCACCCATCCTTCCACTACTCCAGCTCAAGCATGCTTAACTCTGGAGTTCTTTCTGGATGTGCTCCGGAAAAGGTAAATCAACTTTGGTGACGTAGGTAGCCAAATAAATTCTCTTAAGCCTTTCCACAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

25661539  

End:

25661886

Strand:

-

>ChrB01_LTR-Cassandra_56

TGTAACGCTCCGATCGCTCACTGCTAATGGACCTCCAACACCCGCTCACTCAGCCCTTGGGCTCTTCTGTGCAAAGGATGGTGCGTTAATTTTTTCAAGACTTTAAAGCTTTGTTTACTGACTCTGCAATCACTACATGACCTTTCCCCATGTTTTGGCCTCACTTACACGATATCGTGAATCATTTCCCGATAGGTCGCCTGTCCTTCTATTATTTCAACTCAATCACGCTTAACTCTGGAGTTTTAAATGAATGTATGCCTGAAAAGGTAAGTGCACTTTGGTGACATAGGTAGCCAAATCAATTCTATTAAGTCTTCATCATATACCAGAAATTGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

337

Start:

25683944  

End:

25684280

Strand:

+

>ChrB01_LTR-Cassandra_57

GTTGTGATATATGGAGAGGCTTAAGAGAATTGATTTGGCTACCTATATCACCAAAGTTGACTTACCTCTTCCGTTACACATCCGTTTAAAACTCCAGAGTTAAACGTGCTTGGGCTGGAGTAGTGAAATGATAGGTGACATATCGGAAAGTGATTCGCGATACCGTGCGAGTGAGGCCAAAACACGGGGAAAGATCATGTGGTGATTGCAGGGACAGTAAACAAGACTTTCGGACCTGGGAAAAATTAACGGACCGACCGTTGGCACGGGAAAGGGCCCAAGGGCCGAATGAGCGGGCGTGGGTGGCCCATTAGCTGTGGGCGGTCGGGGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

215

Start:

27416603  

End:

27416817

Strand:

-

>ChrB01_LTR-Cassandra_58

TTACTGATCCTGCAATCATCACATGATCTTTGCTTATGTTTTGGCCTCACTTGCACGATATCGCAAATCACTTTTGATTGGTCACTCATTCTTTGACTAATCAAGTTCAAACATACTTAAATCTGTAGTTCTTTGTAGATGTGTGCCCGAAATAAGTGCACTTTAATGACATAACTATTCAAACAAATTATATTAAGCATTTCACCATATATTAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

114

Start:

27416832  

End:

27416945

Strand:

-

>ChrB01_LTR-Cassandra_59

ATTCGCTCTTTCTCACAGAGCTTAACTTCCTCGTTGCACCCCACTATCGTCAACCATGTTAGTGTGCGCCCACACATGACTCTACAATTGTCTGGGATCTATTCTACTACCACT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

219

Start:

27417023  

End:

27417241

Strand:

-

>ChrB01_LTR-Cassandra_60

GGAACCTCAAAATACTTGATTACTAACCATGCAATCATCACATGATCTTTTCTCGTACTTTGGGCAACCCACACGATATCAAGAATTCCATCGTTTAAATCCTCAGCTCAAGGATACTTTGATTTTAGAGTTTTCTATACATGTGTACCCAAAAAACAGATACACTTTAATAACATAAATATCTAAATCAATTCTCTAAAATATTTCACCATATACCAC