ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Cassandra_81 RetrotransposonsLTRLTR-Cassandra3203657515836575477-
ChrB01_LTR-Cassandra_82 RetrotransposonsLTRLTR-Cassandra3203657560336575922-
ChrB01_LTR-Cassandra_83 RetrotransposonsLTRLTR-Cassandra3413657602336576363-
ChrB01_LTR-Cassandra_84 RetrotransposonsLTRLTR-Cassandra3303670112436701453+
ChrB01_LTR-Cassandra_85 RetrotransposonsLTRLTR-Cassandra3543670156036701913+
ChrB01_LTR-Cassandra_86 RetrotransposonsLTRLTR-Cassandra1463677830736778452-
ChrB01_LTR-Cassandra_87 RetrotransposonsLTRLTR-Cassandra3113677857936778889-
ChrB01_LTR-Cassandra_88 RetrotransposonsLTRLTR-Cassandra3313728674137287071+
ChrB01_LTR-Cassandra_89 RetrotransposonsLTRLTR-Cassandra3403728716937287508+
ChrB01_LTR-Cassandra_90 RetrotransposonsLTRLTR-Cassandra2233749322537493447-
ChrB01_LTR-Cassandra_91 RetrotransposonsLTRLTR-Cassandra1043749346637493569-
ChrB01_LTR-Cassandra_92 RetrotransposonsLTRLTR-Cassandra3243809271338093036-
ChrB01_LTR-Cassandra_93 RetrotransposonsLTRLTR-Cassandra3323809314238093473-
ChrB01_LTR-Cassandra_94 RetrotransposonsLTRLTR-Cassandra3043914331439143617-
ChrB01_LTR-Cassandra_95 RetrotransposonsLTRLTR-Cassandra3133914372739144039-
ChrB01_LTR-Cassandra_96 RetrotransposonsLTRLTR-Cassandra3153914415439144468-
ChrB01_LTR-Cassandra_97 RetrotransposonsLTRLTR-Cassandra3313914457839144908-
ChrB01_LTR-Cassandra_98 RetrotransposonsLTRLTR-Cassandra3203998078239981101+
ChrB01_LTR-Cassandra_99 RetrotransposonsLTRLTR-Cassandra3484000700840007355-
ChrB01_LTR-Cassandra_100 RetrotransposonsLTRLTR-Cassandra3354000746240007796-

< 5 6 7 8 9 > Total 164


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

320

Start:

36575158  

End:

36575477

Strand:

-

>ChrB01_LTR-Cassandra_81

CCCCGACCGCTTCATCGGCACGCCACCCAATTTTTCGTCCGTGGCCCCATCCCATCCAATGGTTGGTCGTTAAATTTTGAAGGCTCGAAATCATTGTTTACTTACCCCGCATCACCACATGACCTTTCCCGTGCTTTGGCCTCACTCGACGCTTATCGCGAATCACTTCGATAGGTCACCCATCCTTCCACTACTCCAACCAAGCACGCTTAACTCGAGTTCTTTTAGATGTGTTCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

320

Start:

36575603  

End:

36575922

Strand:

-

>ChrB01_LTR-Cassandra_82

TGGGCACCCGCCCGGCTTCTCTCGGCCCGTGGGCCCCATCCCATCCAATGGTTGGTCGTTAAATTTTCGAAGGCTCGAAATCATTGTTTACTTACCCTGCAATCACCACATGACCTTTTCCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCCCGAGAGGTCACCCATCCTTCCACTACTCTAGCTCAATCACGCTTAACTCTGGAGTTCTTTTAGGATGTGTTCCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

341

Start:

36576023  

End:

36576363

Strand:

-

>ChrB01_LTR-Cassandra_83

TGTAACGCTCGCACCGCCCACGCTATGGGCCACCCACGCCTTCTCGCCCGTGGGCCCCATCCCATCCAATGGTTGGTCGTTAAATTTTCGAAGGCTCGAAATCATTGTTTACTTACCCTGCAATCACCACATGACCTTTCCCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCCCGAGAGGTCACCCATCCTTCCACTACTCTAGCTCAATCACGCTTAACTCTGGAGTTCTTTTAGGATGTGCTCCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

330

Start:

36701124  

End:

36701453

Strand:

+

>ChrB01_LTR-Cassandra_84

ATATGGAAAGATTTAAGAGAATTGGTTTGACTATCTATGTCACCAAAGTTCACCTACCTGTTTGAGAGCACATCCTGGAAGAACTCTAGAGTTAAGCGTGTTTGAGCTGGAGTAGTGGAAGGATGGGTGACATATCGGAAAGTGATTCGCGATATCGTGTGAGTGAGACTAAATTACGGATAAAGATCATATGGTAATTTCAGGGTCAGTAAAAAATGATTTTGAACCTTTGGAAAAATTAACAGACCGATCGTTAGAACAGAATAGTGCCCACGGGCCGAGAGAGTGGGCGTGGGTGGCCCATTAGCCGTGGACGGTCGGGGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

354

Start:

36701560  

End:

36701913

Strand:

+

>ChrB01_LTR-Cassandra_85

TGTAACATCCCGAGTTGTGATATGCGGAAAGGCTTAAGAGAATTGATTTTGCTATCTATATCACCAAAGTGCACTTACCTTTTCGGGAGCACATCCTGGAAGAACTCTGGAGTTAAGCGTGCTTGAGCTGAAGTAATGGAAGGATGAGTGACATATCGGGAAGTGATTTGCGATATCCTGTGAGTGAGACCAAAGTACAGGAAAAGGTCATGAGGTGATTGCAGGGTCGGTCAGTAAACAATGATTTCGAGCCTTGAAAAAATTAACGGACCGACCGTTGGAGTGGGATGAGGCCCATGGGCCGAGAGAACGGACGTGGATGGCCCATTAACCATAGACGATCGGGACATTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

146

Start:

36778307  

End:

36778452

Strand:

-

>ChrB01_LTR-Cassandra_86

ACTTCCCGACAGGTCACCCATCCTTCCACTACTCCAACTCAAGCACGCTTAACTCTGGAGTTCTTTCCGATGCCCTAAAAGATAAGTCGACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

311

Start:

36778579  

End:

36778889

Strand:

-

>ChrB01_LTR-Cassandra_87

CTAATGGGCCACCCTCACCCGCTCTCGCCCGTGGGTCCCATCCCATCCGACGGTCGGTCGTTAAATTTTCGGCTCGAAATCATCGTTTCTCGACCTGCATCACCACATGACCTTTCCCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCGATAGGTCACCCATCCTTCCACTACTCCAACTCAAGACGCTTAACTCGGAGTTCTTTCGGATGTGCTCCGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

37286741  

End:

37287071

Strand:

+

>ChrB01_LTR-Cassandra_88

TGTAACATCCCGAGTTGTGATATGTGAAAAGGTTTAAAAGAATTGATTTGACTACATATGTCACCAAAGTTGACTTACCTTTTCCGAGCACATCTCGAAAGAACTCCGAGTTAAGCGTCTTGAACTGGAGTAGTGGAAGGATGGATGACCTATCGGAAGTGATTCGCGATAGCGGTGAGTGAGGCCAAAGCACGGGAAAGGTCGTGGTGATTGCAGAGTCGCGAACGATGATTTCGAGCCTTCGAATTAACGACCGACCGTCGGATGGGATGGGGCCCACGGACCGAGAGCGGGCGGGTGGCCCATTAACCGTGGATGGTCGGGCGCTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

340

Start:

37287169  

End:

37287508

Strand:

+

>ChrB01_LTR-Cassandra_89

TGTAACATCCCGAGTTGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTTACCAAAGTTGACTTACCTTTTCCGAGCACATCTCGAAAGAACTCAGAAGTTGCTGCGTTTCGAAATGGAGTAGTGGAAGGATGGGTGACCTATCTGAAGTGATTCGCGATAGCGGTGAGTGAGGCCAAAGCACGGGAAAGGTCGGTGGTGATTGCAGAGTCGCGAACGATGATTTCGAGCCTTCGGAATTAACGACCGACCGTCGGATGGGATGGGACCCACGGGCCGAAAGAGCGGACGTGGGTGGCCCATTAACCGTGGATGGTCGGGGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

223

Start:

37493225  

End:

37493447

Strand:

-

>ChrB01_LTR-Cassandra_90

AAAGACTTGTTTATTAGTTCTACAATTATTTCATGAAAATTTATCGTACTTTGGCCTCAATCGTACGATATTTTGATTCTGATATGTCATCCATCTTAATACTACTCCAAATTTAAACATTCTTAACTCTTGAATTCTTTTTAAATGTGTGACAGTTAAAATATGTTTCAATTATGTGACATATGTAGCTAAATCAATTCAATTAAACGTTTCTCATATACCA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

104

Start:

37493466  

End:

37493569

Strand:

-

>ChrB01_LTR-Cassandra_91

TCACCCAACTCACTGAGCACAATGTCTTTGTTGTGCCTCATGATAGTCATGCATGTTAGTATGAGCCCACAAATGACTCCACATTCGCCTGAGTTTAGTTCTAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

324

Start:

38092713  

End:

38093036

Strand:

-

>ChrB01_LTR-Cassandra_92

CTAATGGACTTCCCACGTCCGCTCACTCGTCCTGTGGACATTATTCCATATGATGAGCAGTGCATTAATTTTTCGGAAGTTCACTAGTCATGTTTACTAACCCTACATTCATCACGCGACTTTTCTACGTGCTTTAACCTCACTCGTACGATATCATGAATAACTTTCTGATAGATCACTCATCCTTCTACTACTCCAACTCAATCACACTTAACTTCAGAGTTTCAAACGGATGTGTGCCCAGAAAAGTAAGTGCTAAAGTGACATAGATAGCCAAATCAATTCCCTTAAACCTTTTCATATACCACAAACCATGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

38093142  

End:

38093473

Strand:

-

>ChrB01_LTR-Cassandra_93

TGTAACGTCCTAATCGCCCACAGCTAATGGGCCTCCCACGCCCGCTCACTCGGCTCGTGAGCTCTATTCCATGCGATGAGTTGTGCATTAATTTTTCAGAGGCTCATTAGTCATGTTTACTGACCCTGCAATCACCATATGATATTTTCCCGTGCTTCTTGGCCCCACTCGCACGATATCGCGAATAACTTTACGATAGATCACTCATCAGTATACTACTCCAGCTCAAGCACACGTAACTCTGTAGTTCTAAACAGATGTGTGCCCGATAAGGTAATCACACTTTGATGATATAGGTAGTCAAATCAATTCTTTAACCCTTTTCATATACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

304

Start:

39143314  

End:

39143617

Strand:

-

>ChrB01_LTR-Cassandra_94

CCGACCGCCATCGCTAATGGGCCACCCACACCCGCCACTCGCCCGTGGCCCCATCCCATCCGACGGTCGTTAATAATTCGAAGGCTCGAAATCATTGTTTATCGACCGCATCACCACCGACCTTTCCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCGATAGGTCACCCATCCTTCCACTACTCCACCAAGCACGCTTAACTCGAGTTCTTCGTGATGTGCTCTAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCATTTCACATATCACAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

313

Start:

39143727  

End:

39144039

Strand:

-

>ChrB01_LTR-Cassandra_95

TAACGCCCGACCGCCCACGCTAATGGGCCACCCACACCCGCCACTCGCCCGTGGCCCCATCCCATCCGACGGTCGTTAATAATTCGAAGGCTCGAAATCATTGTTTATCGACCCCGCAATCACCACCGACCTTTCCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCGATAGGTCACCCATCCTTCCACTACTCCACCAAGCACGCTTAACTCGAGTTCTTTCGAGATGTGCTCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTTAAGCCATTTCACATATCACAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

315

Start:

39144154  

End:

39144468

Strand:

-

>ChrB01_LTR-Cassandra_96

CCCGACCGCCCACGCTAATGGGCCACCCACACCCGCCACTCGCCCGTGGCCCCATCCCATCCGACGGTCGGTCGTTAATAATTCGAAGGCTCGAAATCATTGTTTATCGACCCCGCAATCACCACCGACCTTTCCCGTGCTTTGGCCTCACTCGCGACGCTATCGCGAATCACTTCGATAGGTCACCCATCCTTCCACTACTCCAGCTCAAACACGCTTAACTCGAGTTCTTTCGTGGTGCTCCTAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCATTTCACATATCACAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

39144578  

End:

39144908

Strand:

-

>ChrB01_LTR-Cassandra_97

CCCGACCGCCATCGCTAATGGGCCACCCACACCCGCCACTCGCCCGTGGGCCCCATCCCATCCGACGGTCGGTCGTTAATAATTCGAAGGCTCGAAATCATTGTTTATCGACCGCATCACCACCGACCTTTCCCGTGCTTTGGCTCACTCGCACGCTATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCCACTACTCCAGCTCAAACACGCTTAACTCTGGAGTTCTTTCAGGTGGTGCTCCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCATTTCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

320

Start:

39980782  

End:

39981101

Strand:

+

>ChrB01_LTR-Cassandra_98

ATATGAGAAGGTTTAAGAGAACTGATTTAGCTACCTATGCCACCAAAGTGCACTTACCTTTTCGGGAGCACATCCAGAAAGAACTTCAGAGTTAAACATGCTTGAACTGGAATAGTGAAAGGATGTGTGACCTATCAGGAAGTGATTCGAAATACCGTGTGAGTGAGACAAAAACACGGGAAAAGATCATGTGGTAATTGCAGGGTCAGTAAACAATAATTTCAAACATTGGAAAATTAACGGACCGACCGTTGGAACGGGATGGACCCACGGGCCGAGAGAACGGGCGTAGGCGGTCTATTAGTCGTGGGCAGTCGGGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

40007008  

End:

40007355

Strand:

-

>ChrB01_LTR-Cassandra_99

TGTCACGCCCCGACCGTCCACGGCTACTGGGTCATCCACGACCGCTTTCTTGGCCCGTGGGCTCCATCCCATCCGACGGTCGATTGTTAAATTTCCGAAGGCTCAAAATCATTGTTTACTGACCCTGCAATCGCCACATAACATTTCTCCGTGCTTTGGCCTCACTCGCACGATATCGCTGATCATTTTCCGATAGGTCACCCATCCTTTGACTACTCCAGCTCAAGCACGCTTAACTCTGGTGTTCTCTCTAGATGTGCTTCCGAAAAGGTAAGTGTACTTTGGTGACATAGGTAGGCAAATCAATTCTCTTAAGCATTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

335

Start:

40007462  

End:

40007796

Strand:

-

>ChrB01_LTR-Cassandra_100

TGTAACTCCCCGACCGTCCACGGCTAATGGGCCATCCACGACCGCTTTCTTGGCCCGTGGGCTCCATCCCATCCGACGGTCGATTGTTAAATTTCCGAAGGCTCAAAATCATTGTTTACTGACCCTGCAATCACCACATGACCTTTCTCCGTGCTTTGGCCTCACTCGCACGATATCGCGGATCATTTCCCTATAGACCACCCATCCTTTGACTACTCCAGCTCAAGCACGCTTAACTTTGGAGTTCTCTCTAGATGTGCTCCTGAAAAGGTAAGTTTACTTTGGTGACATAGATAGCTAAATCAATTCTCTTAAACCTTTCCACATATCACAAC