ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Cassandra_61 RetrotransposonsLTRLTR-Cassandra912921920529219295+
ChrB01_LTR-Cassandra_62 RetrotransposonsLTRLTR-Cassandra3492922524729225595+
ChrB01_LTR-Cassandra_63 RetrotransposonsLTRLTR-Cassandra3482922570229226049+
ChrB01_LTR-Cassandra_64 RetrotransposonsLTRLTR-Cassandra3232943816829438490+
ChrB01_LTR-Cassandra_65 RetrotransposonsLTRLTR-Cassandra1092943849129438599+
ChrB01_LTR-Cassandra_66 RetrotransposonsLTRLTR-Cassandra2922943860529438896+
ChrB01_LTR-Cassandra_67 RetrotransposonsLTRLTR-Cassandra3243035047930350802-
ChrB01_LTR-Cassandra_68 RetrotransposonsLTRLTR-Cassandra3483035090830351255-
ChrB01_LTR-Cassandra_69 RetrotransposonsLTRLTR-Cassandra3493072638330726731+
ChrB01_LTR-Cassandra_70 RetrotransposonsLTRLTR-Cassandra3483072683730727184+
ChrB01_LTR-Cassandra_71 RetrotransposonsLTRLTR-Cassandra3453072728430727628+
ChrB01_LTR-Cassandra_72 RetrotransposonsLTRLTR-Cassandra3503072773030728079+
ChrB01_LTR-Cassandra_73 RetrotransposonsLTRLTR-Cassandra3443347919033479533+
ChrB01_LTR-Cassandra_74 RetrotransposonsLTRLTR-Cassandra3313347964733479977+
ChrB01_LTR-Cassandra_75 RetrotransposonsLTRLTR-Cassandra1093440829234408400-
ChrB01_LTR-Cassandra_76 RetrotransposonsLTRLTR-Cassandra3153476894234769256-
ChrB01_LTR-Cassandra_77 RetrotransposonsLTRLTR-Cassandra3363525684235257177-
ChrB01_LTR-Cassandra_78 RetrotransposonsLTRLTR-Cassandra1703525728935257458-
ChrB01_LTR-Cassandra_79 RetrotransposonsLTRLTR-Cassandra2873547547835475764+
ChrB01_LTR-Cassandra_80 RetrotransposonsLTRLTR-Cassandra3193622637736226695+

< 4 5 6 7 8 > Total 164


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

91

Start:

29219205  

End:

29219295

Strand:

+

>ChrB01_LTR-Cassandra_61

TAAAATTTCGATCTCTAATATATAATGGTGCATGTAGAAAACTTTTAGAAGTTGATTTGATTATCTATATCACTATATTATACTTATTTTT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

29225247  

End:

29225595

Strand:

+

>ChrB01_LTR-Cassandra_62

TGTAACATCCCGAGTTGTGATATACGGAATAGCTTAAGAGAATTGATTTGACTACCTATGTCACCAAAGTGCACTTACCTTTTCGGGAGCACATCCAGAAAGAACTCCAGACTTAAGCGTGCTTGAGCTGGAGTAGTGGAAGGATGGGTGACCTATCGGGAAGTGATTCGCAATATCGTGTGAGTGAGGCCAAAGCACGGGGAAAGGTCAGGTGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTCAGAAAAATTAACGACCGACCGTCAGATGGAATGTGACCCACGGGCCGAGAGAGCGGGCGTGGGTGGCCCATTAGCCGTGGGCGGTTGGGGCGTTATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

29225702  

End:

29226049

Strand:

+

>ChrB01_LTR-Cassandra_63

TGTAACATCCCGAGTTGTGATATGCGGAATAGCTTAAGAGAATTGATTTGACTACCTATGTCACCAAAGTGCATTTACCTTTTCGGGAGCACATCCAGAAAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGTAGTGTAAGGATGGGTGACCTATCGGAAAGTGATTCGCAATATCGTGTGAGTGAGGTCAAAGCACGGAGAAAAGTCAGGTGGTGATTGCAGGAACAGTAAACAATGATTTTGAGCCTTGGAATTATTAACGACCGACCGTCGGATGGGATGGGGTCCACAAGCCGAAAGAGCGGACGTGGGTGGTCCATTAGCCGTGGGCGGTTAGTGCGTTATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

323

Start:

29438168  

End:

29438490

Strand:

+

>ChrB01_LTR-Cassandra_64

ATATGGAAAAATTTAAAAGAATTGATTTGAATACTTATATTATCAAAATACATTTACCTTTTGGGTTATATATCTAGAAAGAACTCTAGAACTAAGGATGTTTTAACTGTAGTTGTGGAAGGATATAACCTATCAAAAAGTAATTCGTGATATCATGTGAGTGAGGATAATACACAAAGAAGTGTTATGTAATGATTACATGGTCAGTAAACAAAACTTTCGAACCTCCAAAAAATTAACGCGTCATCCATCACACAGTGGACTCACAGACCGAATGAACGGACATGGGAGACTTATTAGCCGTGGACGGTCAAAACGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

109

Start:

29438491  

End:

29438599

Strand:

+

>ChrB01_LTR-Cassandra_65

AATGGTATCTGAGTGAACCCAGACGAGAGTGGAGCCCTTGTGTGGGCTCACACTAACATGAATAATAATCTTGAGGGGCAACAAAAACGTTGCGTTTTGTGAGAGGGGT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

292

Start:

29438605  

End:

29438896

Strand:

+

>ChrB01_LTR-Cassandra_66

TGTAACAACCCGATGTATGGTATATAGAAACGTCTAAAAGAATTAATTTAGCTACATATGTTATCAAAGTAGATTTACATTTTTGGTCACACATCCAAAAACTCTAAATTTCAGCGTACTTGATCTGGAGAAGCGGAAGAATATGAAACCTATCGGGAAATTATTCATGATATCGTGAGTGATGAAAAAGTGCGGTGAAGGGTCATATGATGATTATAGGGTCAGTAAACAAGACTTTCAAGCCTTCGGAAAAAACCAACACAGCGCCCGTCGCACGGAATGAGACTCACGG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

324

Start:

30350479  

End:

30350802

Strand:

-

>ChrB01_LTR-Cassandra_67

ACCAATGGGTCACCCACGCCCGGTCTTTCAGCCCATGTGCCCAACCCATTCGACGGTCGGTCGTTAATTTCCGAAGGTTCGAAATTATTGTTTACTGATCCTACAATCACCACATGACCTTTTCCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCTCGATAGGTCACCCATCCTTCCACTACTCCAGCTCAAGCATGCTTAACTCTGGAGTTCTCTCTAGATGTGCTCCCGAAAAGATAAGTGCACTTTGGTGATATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

30350908  

End:

30351255

Strand:

-

>ChrB01_LTR-Cassandra_68

TGTAACGCCCCGACCCGCCCACGACTAATGGGCCACCCACGCCTGCTCTCTCGGCCCATGGGCCCCATCCCATCCGACGGTCGGTCGTTGATTTCCGAAGGTTCGAAATCATTGTTTACTGACCCTGCAATCACCACATGACCTTTTCCCGTGCTTTGCCCTCACTCGCACGCTATCGCGAATCACTTCCCAATAGGTCACCCATCCTTCCACTACTCCAGCTCAATCACGCTTAACTCTGAATTTTTCTCTAGATGTGCTCCCGAAAAGGTAAGTGCACTTTGGTGACATAGGTAGCCAAATCAATTATCTTAAACCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

30726383  

End:

30726731

Strand:

+

>ChrB01_LTR-Cassandra_69

TGTAACATCCCGAGTTGTGATATGTGTAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGATTTACCTTTTCCGGAGCACATCCAGAAAGAACTCTAGAGTTAAGCGTGCTTGAGCTGGAGTAGTGGAAGGATGGGTGACCTATCGGGAAGTGATTCGCGATAGCATGCAAGTGAAGCCAAAGCACGGGAAAAGGTCGGATGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTGGAAAAATTAACGGACCGACCGCTGGAACAGGATGGGCCCACGGGCCGAGAGAGCGGGCGTGGGTGGCCCATTAGCTGTGGGCGGTCGGGGCATTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

30726837  

End:

30727184

Strand:

+

>ChrB01_LTR-Cassandra_70

TGTAACATCCCGAAGTCGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGATACCTATGTCACAAAAGTTGATTTACCTTTTCCGAGCACATCCGTAAAGAACTCTAGAGTTAAGCGTGCTTGAGCTGGAGTAGTGGAAGGATGGGTGACCTATCGGGAAGTGATTCGCGATAGCATGCAAGTGAAGCCAAAGCACGGGAAAAGGTCGGATGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTGGAAAAATTAACGGACCGACCGCTGGAACAGGATGGGCCCACGGGCCGAGAGAGCGGGCGTGGGTGGCCCATTAGCTGTGGGCGGCCGGGCATTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

345

Start:

30727284  

End:

30727628

Strand:

+

>ChrB01_LTR-Cassandra_71

TGTAACATCCCGAAGTCGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGATTTACCTTTTCCGAGCACATCCGAAAGAACTCTAGAGTTAAGCGTGCTTGAGCTGGAGTAGTGGAAGGATGGGTGACCTATCGGAAGTGATTCGCGATAGCATGCAAGTGAAGCCAAAGCACGGGAAAAGGTCGGATGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTGGAAAAATTAACGGACCGACCGCTGGAACAGGATGGGCCCACGGGCCGAGAGAACGGCGTGAGTGGCCTATTAGCTGTGGGCGGCCGGGCATTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

350

Start:

30727730  

End:

30728079

Strand:

+

>ChrB01_LTR-Cassandra_72

TGTAACATCCCGAGTCGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGATACCTATGTCACAAAAGTTGATTTACCTTTTCTGGAGCACATCCAGAAAGAACTCTAGAGTTAAGCGTGTTTGAGCTGAAGTAGTGGAAGGATGGGTGACCTATCGGGAAGTGATTCGCGATAGCGTGCGAGTGAGGCCAAAGCACGGAAAAAGGTCGGGTGGTGATTGCTGGGTCAGTAAACAATGATTTCGAGTCTTGGAAAAATTAACAGACCGATCGCTGGAACGGGATGGGGCCCACGGGCCGAGAGAACGGGCGTGAGTGGCCTATTAGCTGTGGACGGTCGTAGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

344

Start:

33479190  

End:

33479533

Strand:

+

>ChrB01_LTR-Cassandra_73

TGTAACATCCCGAGTTGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGACTTACCTTTTCCGAGCACATCCGAAGAACTCGAGTTAAGCGTGCTTGAGCTGGAGTAGTGGAAGGATGGGTGACCTATCGGGAAGTGATTCGCGATAGCGTGCGAGTGAGGCCAAAGCACGGGGAAAGGTCATGTGGTGATTGCAGGGTCAGTAAACGATGATTTCGAGCCTTCGAAAATTTAACGACCGACCGTCGGATGGGATGGGGCCCACGGGCCGAGAGAGCGGGCGTGGGTGGCCCATTAGCCATGGGCGGGTCGGGGCGTTATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

33479647  

End:

33479977

Strand:

+

>ChrB01_LTR-Cassandra_74

GTTGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGACTTACCTTTTCCGGAGCACATCCTGAAAGAACTCCAGAGTTAAGCGTGATTGAGCTGGAGTAGTGGAATGATGGGTGACCTATCGGGAAGTGATTCGCGATAGCGTGCGAGTGAGGCCAAAGCGGGGAAAGGTCATGTGGTGATGCAGGGTCGATGCGATGATTTCGAGCCTTCGAAAATTTAACGACCGACCGTCGGATGGGATGGGGCCCACGGGCCGAGAGAGCGGGCGTGGGTGGCCCATTAGCCATGGGCGGGTCGGGGCGTTATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

109

Start:

34408292  

End:

34408400

Strand:

-

>ChrB01_LTR-Cassandra_75

AAGTCCGATTAATTTTAGAATTCTTTATGGATGTGTGACTGAAAAAATAAGTGCATTTTAATAATATAGATAATCAAATTTATTCTTTTGAACCTCTTAAAATGTACCA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

315

Start:

34768942  

End:

34769256

Strand:

-

>ChrB01_LTR-Cassandra_76

GGGCCACCCACACCCGCACTCTCGGCCCGTGGATCCCAACCCATCCGACGGTCGGTCTTTAATTTTCCCAAGGCCCGAAAATCTTGTTTACTGACCCTGCAATCACCACATGACCTTTCCCCGAACTTTCACTCGCACGATATCGCGGATCACTTTCCGATAGGTCACCCATCCTTTAGCTACTCCAGCTCAAGCACGCTTAACTTTGGAGTTCTCTCTGGATGTGATCCCGAAAAGATAAGTGCACTTTAATGACATAGGTAGCCAAATCAATTCTCTTAAACCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

336

Start:

35256842  

End:

35257177

Strand:

-

>ChrB01_LTR-Cassandra_77

AGCGCTCCGACCTTCGAGGGTTAATGAGCATCCTACACCTGCTCACTAGGTATGTGGGCCTCAATCCGTGTGATGGTTGATGCGTTAAATTTTTGGAGGCTTGAAAGACTTGTTTACTCACCCTGCAATCGTCTCATGACCATTTCCCATGTTTTGTCATCACTCGCACGGTATCGCAAATGACTTTCCGATAAGCCACTCATTCTTTTACTACTCCAACTCAAGCAAGCATAACTTAGGAACTTTTTTTCTGAATGTGTAGCAGAAAAAAGGTAAGTGAAGTTTTGTGATACATGTAGCTAAATCAATTCCATTAAGCCTTTCACTATATACCAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

170

Start:

35257289  

End:

35257458

Strand:

-

>ChrB01_LTR-Cassandra_78

GACCTTGCAATCAACACATACATGAAATTTCCTCATGATTTGGTTTCACTTATACGATATTGCGAATGTTTCCTAATAGATCACCCATCATTTCATTACTCCAGCTCATGCATGCTTAACACTGGAGTTCTTTATTTGTGACCAAATATGTAAGTTAGCTTTGGTGATAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

287

Start:

35475478  

End:

35475764

Strand:

+

>ChrB01_LTR-Cassandra_79

TCATCAAAATACACTTACTTTTTCAATAATACATCAAGAAAGAACTCCAGAGTTAAGCTTGCTTAAACTGGAGTAGTAGAATGATGGGTGGCCTACCGAAAAATAATTTACGTAGTGTGAATGAGATCAAAGCACCCGAAAAGGTCATGTGCTGATTGCAGGATCACTAACAAGACTTCAAGCCTCTAATAATTTAACTAATGCACCGTTCATCGCACAGAATGAGACTCACACGAAGAGTGAGCAGACTGAGAGGTCCGTTAGTCGTGCGTGGTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

319

Start:

36226377  

End:

36226695

Strand:

+

>ChrB01_LTR-Cassandra_80

GAAAGGCTTAAGAAAATTAATTTGGCTACCTATGTCACTAAAGTGCACTTACCTTTTCGGGAGCCATCCTGAGAGAACTCCAGAGTTAATCGTGCTTGAGGTGGAGTAGTCAAAGGATGGATGACCTATCGAAAAATGATCCGTGATATCGTGCGAGTGAGGCCAAAACACGGGGAAAGGTCATGTGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTGGAAAATTAACGACCGACAGTCGGATGGGATAGGATCATGGGCCTAGAGAGCGGGCGTGGGTGGCCCATTAGCCGTGGATGGTCGGGGTGTTACA