ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Cassandra_21 RetrotransposonsLTRLTR-Cassandra34965843836584731+
ChrB01_LTR-Cassandra_22 RetrotransposonsLTRLTR-Cassandra34371819307182272+
ChrB01_LTR-Cassandra_23 RetrotransposonsLTRLTR-Cassandra34471823687182711+
ChrB01_LTR-Cassandra_24 RetrotransposonsLTRLTR-Cassandra35072612737261622-
ChrB01_LTR-Cassandra_25 RetrotransposonsLTRLTR-Cassandra33672617287262063-
ChrB01_LTR-Cassandra_26 RetrotransposonsLTRLTR-Cassandra35272805137280864-
ChrB01_LTR-Cassandra_27 RetrotransposonsLTRLTR-Cassandra34572809657281309-
ChrB01_LTR-Cassandra_28 RetrotransposonsLTRLTR-Cassandra35072814157281764-
ChrB01_LTR-Cassandra_29 RetrotransposonsLTRLTR-Cassandra33275285797528910-
ChrB01_LTR-Cassandra_30 RetrotransposonsLTRLTR-Cassandra35098605789860927-
ChrB01_LTR-Cassandra_31 RetrotransposonsLTRLTR-Cassandra34298610249861365-
ChrB01_LTR-Cassandra_32 RetrotransposonsLTRLTR-Cassandra34898614739861820-
ChrB01_LTR-Cassandra_33 RetrotransposonsLTRLTR-Cassandra34598619269862270-
ChrB01_LTR-Cassandra_34 RetrotransposonsLTRLTR-Cassandra3111051846810518778+
ChrB01_LTR-Cassandra_35 RetrotransposonsLTRLTR-Cassandra1001051877910518878+
ChrB01_LTR-Cassandra_36 RetrotransposonsLTRLTR-Cassandra3431161291811613260+
ChrB01_LTR-Cassandra_37 RetrotransposonsLTRLTR-Cassandra3471161336611613712+
ChrB01_LTR-Cassandra_38 RetrotransposonsLTRLTR-Cassandra3461327412913274474+
ChrB01_LTR-Cassandra_39 RetrotransposonsLTRLTR-Cassandra3231327460013274922+
ChrB01_LTR-Cassandra_40 RetrotransposonsLTRLTR-Cassandra3251359822713598551+

< 2 3 4 5 6 > Total 164


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

6584383  

End:

6584731

Strand:

+

>ChrB01_LTR-Cassandra_21

TGTAACATCTCGGTTTGTGGTATATGATGGAAGACTTAAGAGAATTGATTTGATAACCTATTCACCAAAGTGAACTTACCTTTTCAGTTAACCATCAATTTAAAATTCCAGAATTAAGCGTGTTTGGCCTGGAGTAGTAGAAGGATGAGCGATCTATCCGGAAGTAATTCGCGATATCGTGTGAGTGAGGCCAAAACACGGAAAATGTCATATAGTGATTGCAGGGTTAGTAAACAATGATTTCGAGTCTTCCAAAATATTAACGTACCGCCCGTTAGATGGGATGGACCCACGGACCAAGAGAATGAGCGTGGAAAGCCCATTAGTCGTGATCAATGGGGGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

343

Start:

7181930  

End:

7182272

Strand:

+

>ChrB01_LTR-Cassandra_22

TGTAACATCCCGAGTTGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGACTTATCTTTTCCGGAACACATCCTGAAAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGTAGTGGAAGGATGGGTGACCTATCGAAGTGATTCGCGATAAGGCGAAAGTGAGGCCAAAGCACGGGAAAGATCATGGTGATTGCAGGTCGATAAACAATGATTTCGAGCCTTCGAATTATTAACGACCGACCGTCGGATGGGATGGGGCCCATGGGCCTAAAGAGCGGGCGTGGGTGGCCCATTAGCCATGGGCGGGTCGGGGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

344

Start:

7182368  

End:

7182711

Strand:

+

>ChrB01_LTR-Cassandra_23

TGTAACATCCCGAGTTGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGACTTATCTTTTCCGAACACATCTCGAAAGAACTCGAGTTAAGCGTGCTTGGTGGAGTAGTGGAAGGATGGGTGACCTATCGAAGTGATTCGCGATAAGGCGAAAGTGAGGCCAAAGCACGGGGAAAGATCATGTGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTTCGGAATTATTAACGACCGACCGTCGGATGGGATGGGGCCCATGGGCCTAGAGAGCGGGCGTGGGTGGCCCATTAGCCATGGGCGGGTCGGGGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

350

Start:

7261273  

End:

7261622

Strand:

-

>ChrB01_LTR-Cassandra_24

TATAACATTCCGACTGCCCACAGCTAATGGGCCACCCAAGCCCGCTCTCTCGACCCGTGGGTCCCATCCCGTTCCAGCGGTCGGTCCGTTAATTTTTACAAGGATTGAAATCATTGTTTACTGGTCCTGCAATCACCACATGACCTTTCCCCGTGCTTTGGCCTCACTCGCACGATATCGCGGATCACTTCCCGATAGGTCACCCATCATTTGACTACTCCAGCTCAATCACGCTTAACTCTGGAGTTCTCTCTGGATGTGCTCCCGAAAAGGTAAGTGCAATTTAGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTTCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

336

Start:

7261728  

End:

7262063

Strand:

-

>ChrB01_LTR-Cassandra_25

TATAACACTCCGAACGCCCACAACTAATGGCCCACCCAAGCCCGCTCTCTTGGCCACTGAGCCTCATCCCGTTCCAGCGGTCGGTCCATTAATTTTTCCAATGATTGAAATCATTTTTCACTGGCCCTGCAATCACCACATGACTTTTCCCCGTGCTTGGCCTCACTCGCACGATATCGCGGATCACTTCCCGATAGGTCATCCATCCTTTGACTACTCCAGCTCAAGCACGCTTAACTCTCGAGTTCTCTCTGGATGTGCTCCCGAAAAGGTAAGTGCACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGTCTTTTCACATATCACAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

352

Start:

7280513  

End:

7280864

Strand:

-

>ChrB01_LTR-Cassandra_26

TATAACGCTCCGAACATCCACAGTTAATGGGTCATCCAAGTCCGCTCTTTCGGCCCGTAGGCCCCATCCCATTCCAGCGGTCGGTCTGTTAATTTTTCCAAAGATTGAAATCATTGTTTACTGGTCCTGCAATCACCACATGATCTTTTCCTGTGCTTTGGCCTCATTCGCACGATATCGCAGACCACTTCCCGATAGGTCACCCATCATTTAACTACTCCAGCTCAATCACGCTTAACACTGGAGTTCTCTCTGGATGTGCTCCCGAAAAGGTAAGTGCACTTTGGTGACATAGGTAGTCAAATCAATTCTCTTAAACCTTTTTCACATATCACAACTTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

345

Start:

7280965  

End:

7281309

Strand:

-

>ChrB01_LTR-Cassandra_27

TATAACGCCAGACCGCCCATAACTAATGGGTCATCCAAGTCCGCTCTTTAGGCCCGTAGGCCCCATCCCATTCCAGCGGTCGGTCTGTTAATTTTTCCAAAGATTGAAATCATTGTTTACTGGTCCTGCAATCACCACATGATCTTTTCCTGTGCTTTGGCCTCATTCGCACGATATCGCAGACCACTTCCCGATAGGTCACCCATCATTTAACTACTCCACCAATCACGCTTAACACCGAGTTCTCTCGGATGTGCTCCCAAAAGGTAAGTGCACTTTGGTGACATAGGTAGTCAAATCAATTCTCTTAAACCTTTTTCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

350

Start:

7281415  

End:

7281764

Strand:

-

>ChrB01_LTR-Cassandra_28

TATAACGCTCAGACCGCCCATAACTAATGGACCATCCAAGCCCGCTCTCTCGGTCCGTGGGTCCCATCCCGTTCCAGTGGTCGGTCCGTCAATTTTTCCAATGATTGAAATCATTGTTTATTGGCCCTGCAATCATCACATAACCTTTCCCCGTGTTTTAGCCTCACTCGCACGATATCACGGATCACTTCCCAATAGGTCACCCATCATTTGACTACTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCTGGATGTGCTCCCGAAAAGGTAAGTGCACTTTGATAACATAATTAGCCAAATCAATTATCTTAAACATTTTCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

7528579  

End:

7528910

Strand:

-

>ChrB01_LTR-Cassandra_29

TGTAATACCCCGATCGCACACGACTAATGGGCTTCTCATGTCCGCTCACTCGGCCCGTGGACCCATTCCGCGCTACGAATGGTGCATTAATTTTTGGATATTCGAAAGTCTTGTTTACTGACCTTGCAATCACCACATGACCTTTTCTCGTGTTTTTTGCCTCACTCGCATGGTATCACAAATCACTTTCCGATCGGTCATCCATCTTTCTGTTACTCTAGTCCAAGTATGCTTATCTCTGGAATTTTCAATAGATATGTGACCGAAAAGATAAATGTATTTGGATGATATAGATAAGTAGATCAATTCTTTTAAACCTTTCAATATACCAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

350

Start:

9860578  

End:

9860927

Strand:

-

>ChrB01_LTR-Cassandra_30

TGTAACGCCCCGACCGCCCACGGCTAATAGGCCACCCACGTCCGCTCTCTCGGCCCGTGGGTCCCATCCCATCCGACGGTCGGTCGTTTATAATTTCGAAAGGCTCGAAATCATTGTTTACTGATCCTACAATCACCACATGACCTTTTCCCGTGCTTTGGCCTCACTCACACGATATCGTGGATCACTTCCCGATAGGTCACCCATCCTTTGACTACTCCAGCTCAAGCATGCTTAACTGTAGAGTTCTTTCTGGATGTGCTCCCGAAAAGGTAAGTGCACTTTGATGACATAGATAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

342

Start:

9861024  

End:

9861365

Strand:

-

>ChrB01_LTR-Cassandra_31

TGTAGCGCCGACCACCCACGGCTAATGGGCCACCTACGCCGATCTCTCATCCGTGGGCCCCATCCCATCGATAGTCGATCGTTAATAATTACGAAAGGCTCGAAATCATTTTTTCTGACCACGAAATCACCCCATGACCTTTCCCTTGCTTTGGCCTCACTCACCGCGATATCGTGGATCACTTCGATAGGTCACCCATCCTTTGACTACTCCAGCTCAAGCATGCTTAACTGTAGAGTTCTTTCTGGATGTGCTCCCGAAAAGGTAAGTGCACTTTGATGACATAGATAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

9861473  

End:

9861820

Strand:

-

>ChrB01_LTR-Cassandra_32

TGTAACGCCCCGACCACCCACGGCTAATGGGCCACCTACGCCCGATCTCTCATCCCGTGGGCCCCATCCCATACGATAGTCGGTCGTTAATAATTCTGAAAGGCTCGAAATCATTTTTTACTGACCCTGAAATCACCCCATGACCTTTCCCCTTGCTTTGGCCTCACTCGCACGATATCGTGGATCACTTCCCGATAGGTCACCCATCCTTTGACTACTCCAGCTCAAGCACACTTAACTCTAGAGTTCTCTCTGGATGTGCTCCAAAAGGTTAGTGCACTTTGATGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

345

Start:

9861926  

End:

9862270

Strand:

-

>ChrB01_LTR-Cassandra_33

TGTAACGCCCCGACCACCCACGGCTAATGGGCCACCTACGCCCGATCTCTCATCCCGTGGGCCCCATCCCATACGATAGTCGATCGTTAATAATTACGAAGGCTCGAAATCATTTTTACTGACCCTGAAATCACCCCATGACCTTTCCCTTGCTTTGGCCTCACTCGCGATATCGTGGATCACTTCCCGATAGGTCACCCATCCTTTGACTACTCCAGCTCAAGCACACTTAACTCTAGAGTTCTCTCTGGATGTGCTCCCGAAAAGGTTAGTGCACTTTGATGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

311

Start:

10518468  

End:

10518778

Strand:

+

>ChrB01_LTR-Cassandra_34

AGAGAATTATTTTGGCTACATATGTTATCAAAGTTCACTTATCTTTTCGGTCAACCATCCATTTAAAACTTCAGAGTTAAGCGTTTGGACTGGAGTAGTTGAAGGATAGGTGAATTATTGGGAAAATGATTCGCGAAATGGTGCAAGTAAGGCAAAAAAACGGAGAAATGTTATGTGGTGATTGCAGGGTCAGTAAACAAGACTTTCAAACCTCCGAAAATTAACGCATCGTCCGTCACTTGTAATGGGACTCACGGGCCGAATGAGAGGGGGTGGGCGGTCTATTTATCGTGAGCGGTCGGAATGCTATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

100

Start:

10518779  

End:

10518878

Strand:

+

>ChrB01_LTR-Cassandra_35

AGTGGTATCAGAACCGAACCCAGACAAGTGAGGACTCACAATAATATAGGTAATGATCCTTGGACGCAACAGAGACATTGCGTTCTATAAGAAAAGGTGA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

343

Start:

11612918  

End:

11613260

Strand:

+

>ChrB01_LTR-Cassandra_36

TGTAACATCCCGAGTTGTGATATGTGGAAAGGCTTAAGACAATTGATAAACCTATGTCATCAAAGTCGACTTACCTTTTCCGGAGCACATCCTGAAAGAACTCCAGAGTTAAGCGTGCTTGAGCTGAAGTAGTGGAAGGCTTGGTGACCTATCGGAAAGTGATTCGCGATAGTGTGCGAGTGAGGCCAAAGCACAGGAAAAGATCGGGTGGTGATTGCAGGGTCAATAAACAAGACTTTCGAACCTTCGGAAATTAACGACTGACCGTCGGATGGGATGGTACCCACGGGTCGAGTGAGCGGGCGTGGGTGGCCCATTAGCCGTGGGCGGTCGGGGCGTTATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

347

Start:

11613366  

End:

11613712

Strand:

+

>ChrB01_LTR-Cassandra_37

TGTAACATCCCGAGTTGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCATCAAAGTCGACTTGCCTTTTCCGGAGCACATCCTAAAAGAACTCCAGAGTTAAGCGTGCTTAAGCTGAAGTAGTGGAAGGATGGGTGACCTATTGGGAAGTGATTCGCGATAGTGTGCGAGTGAGGCCAAAGCACAGGAAAAGGTCGGGTGGTTATTGCAGGGTCAGTAAACAAGACTTTTGAACCTTCGGAAATTAACGACTGACCGTCGGATGGGATGGGACCCACGGGCCGAGTGAGCGGACGTGGGTGGCCCATTCGCCGTGGGCGGTCGGGGCGTTATA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

346

Start:

13274129  

End:

13274474

Strand:

+

>ChrB01_LTR-Cassandra_38

GTTTCGGTAACATCCCGAGTTGTGATATGTAGAAAGATTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTGCACTTACCTTTCGGGTACATCCGAGAGAACTCCGAGTTGCCGCACTTGAACTGGAGTAGTTAAAGGATGGGTGATCTATCGAGAAGTGATCCGCAATATCGTGCGAGTGAGGCCAAAGCACGGGGAAAGGTCATGTGGTGATTGAAGGGTCAGTAAACATTGATTTTGAGCCTTGGAAAATTAACGACCGACCGCCGGATGGGATGGGGCCCACGGGCCGAGAGAGAGGGCATGGGTGGCCCATTAGCCGTGGACGGTTGGGGCATTTCA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

323

Start:

13274600  

End:

13274922

Strand:

+

>ChrB01_LTR-Cassandra_39

ATGTGGAAAAGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTGCACTTACCTTTTCGGGGGTACATCCAGAGAGAACTCCAGAGTTAAGCGTACTTGAGCTGGAGTAGTCAAAAGATGGGTGACCTATCGGGAAGTGATCCGCGATATCGTGCGAGTGAGGCCAAAGCACGGGGAAAGGTCATGTGGTGATTCCAGGGTCAGTTAACAATGATTTGAGCCTTGGAAAATTAACGACCGACCGTCGGATGGGATGGGGCCCACGAGCCGAGAGAACGGGCGTGGATGCCCATTAGCCGTGGACGATCGGGGCGCTAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

325

Start:

13598227  

End:

13598551

Strand:

+

>ChrB01_LTR-Cassandra_40

TGTAACATCCCGAGTTGTGATATAAGAAAAGACTTAAGAGGATTGATTTGGCTACCTATGTCGCCAAAGTTGACTTACTTTTTCGGCAGCACATCCAGAGAGGATTCCAGAGTTAAGCGTGCTTGAGCTGAAGTAGTCAAAGGATGGGTGACCTATCGGGAAGTGATCCGCGATATCGTGAGAGTGAGGCCAAAGCACGGGAAAAGGTCATGTGGTTATTGCAGGGTCAGTAAACAAAACTTTCGGACCTTGGGAAAATTAACGAACCGGCCGTCGGATGGGATGGGCCCACAGGCCGAGTGAGCGGGCGTGGGTGGCCCATTAG