ID Class Order Superfamily Length Start End Strand View
ChrB01_LTR-Cassandra_1 RetrotransposonsLTRLTR-Cassandra89414897414985-
ChrB01_LTR-Cassandra_2 RetrotransposonsLTRLTR-Cassandra334644252644585-
ChrB01_LTR-Cassandra_3 RetrotransposonsLTRLTR-Cassandra333644707645039-
ChrB01_LTR-Cassandra_4 RetrotransposonsLTRLTR-Cassandra33413836361383969+
ChrB01_LTR-Cassandra_5 RetrotransposonsLTRLTR-Cassandra35013840661384415+
ChrB01_LTR-Cassandra_6 RetrotransposonsLTRLTR-Cassandra34915598021560150-
ChrB01_LTR-Cassandra_7 RetrotransposonsLTRLTR-Cassandra33115984201598750+
ChrB01_LTR-Cassandra_8 RetrotransposonsLTRLTR-Cassandra33828583382858675-
ChrB01_LTR-Cassandra_9 RetrotransposonsLTRLTR-Cassandra32128594452859765-
ChrB01_LTR-Cassandra_10 RetrotransposonsLTRLTR-Cassandra30928605202860828-
ChrB01_LTR-Cassandra_11 RetrotransposonsLTRLTR-Cassandra35129665512966901-
ChrB01_LTR-Cassandra_12 RetrotransposonsLTRLTR-Cassandra35229670072967358-
ChrB01_LTR-Cassandra_13 RetrotransposonsLTRLTR-Cassandra34629674602967805-
ChrB01_LTR-Cassandra_14 RetrotransposonsLTRLTR-Cassandra31933398143340132-
ChrB01_LTR-Cassandra_15 RetrotransposonsLTRLTR-Cassandra32833408883341215-
ChrB01_LTR-Cassandra_16 RetrotransposonsLTRLTR-Cassandra30033413213341620-
ChrB01_LTR-Cassandra_17 RetrotransposonsLTRLTR-Cassandra11361285776128689+
ChrB01_LTR-Cassandra_18 RetrotransposonsLTRLTR-Cassandra23761286906128926+
ChrB01_LTR-Cassandra_19 RetrotransposonsLTRLTR-Cassandra29462607466261039+
ChrB01_LTR-Cassandra_20 RetrotransposonsLTRLTR-Cassandra34963507846351132+

< 1 2 3 4 5 > Total 164


Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

89

Start:

414897  

End:

414985

Strand:

-

>ChrB01_LTR-Cassandra_1

TGTAACGCCCTGACCGCCCAAGCCTAATGGCCTTCCACGCCCATTTTCTTGGCTCGTGGACCCATCCTGTGTGACGGTCGGGGCGTTAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

334

Start:

644252  

End:

644585

Strand:

-

>ChrB01_LTR-Cassandra_2

TGTAACGCCCCGACCGTTCACAGTTAATGGGCTATCCACACCCGCTCTCTCGGTTTGTGGGCTCCATCCCGTTCTAGCGGCCAGTTCGTTAATTTTTCCAATGTTCGAAATTATTGTTTACTGATCCTGCAATCACTACCCGACCTTTTCCCGTGCTTTGGCCTCACTCGCACGTTATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCCACTACTCCAGTTTAAGCACGCTTAACTCTAGAGTTCTTTCTGGATATGCTCCGGAAAAGGTAAGTCAATTTTGGTGACATAGGTAGCCAAATCAATTCTTTTAAGCCTTCCCATATATCAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

333

Start:

644707  

End:

645039

Strand:

-

>ChrB01_LTR-Cassandra_3

TAACGTCCCGACCGCCCACAACTAATGGACCACCCATGCCCGCTCTCTCGGCCCGTGGGCCCTATCCGTTCCAGCGGTCGGTCGTTAATTTTTCGAAGGCTCAAAATCATTGTTTACTGATCGTGCAATCACCACCCGATCTTTTCTCGTGCTTTGGCCTCACTCGCACGCTATCACGAATCACTTCCTGATAGGTCATCCATCCTTCCAGTACTCCAGCTCAAGCACGTTTAATTCTGGAGTTCTTTCTGGATGTGTTTCAGAAAAGTTAAGTCAACTTTGGTAATATAGATAACCAAATAAATTCTCTTAAACCTTCTCGTATATCACAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

334

Start:

1383636  

End:

1383969

Strand:

+

>ChrB01_LTR-Cassandra_4

TGTAACATCCCGAGTTGTGATATGTGAAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGACTTACCTTTTCCGAGCACATCCCGAAGAACTCGAGTTAAGCGTGCTTGAGTTGGAGTAGTGGAAGGATGGGTGACCTATCGGAAGTGATTCGCGATAGCGCGCGAGTGAGGCCAAAGTACGGGAAAGGTCATGTGGTGATTGCAGGTCGTAAACAATGATTTCGAGCCTTCGAAATTTAACGACCGACCGTCGGATGGGATGGGGCCCACGGGCCGAGAGAGCTGGCGTGGCCCATTAGCCATGGGCGGTCGGGCGCTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

350

Start:

1384066  

End:

1384415

Strand:

+

>ChrB01_LTR-Cassandra_5

TGTAACATCCCGAAGTTGTGATATGTGAAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGACTTACCTTTTCCGGAGCACATCCTGAAAGAACTCCAGAGTTAAGCGTGCTTGAGTTGGAGTAGTGGAAGGATGGGTGACCTATCGGGAAGTGATTCGCGATAGCGTGCGAGTGAGGCCAAAGTACGGGGAAAGGTCATGTGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTCGGAAATTTAACGACCGACCGTCGGATGGGATGGGGCCCACGGGCCGAGAGAGCGGGCGTGGGTGGCCCATTAGCCATGGGCGGGTCGGGGCGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

1559802  

End:

1560150

Strand:

-

>ChrB01_LTR-Cassandra_6

TATAACGTCCCGACCCGCCCACGGCTAATGGGCCACCCACGCCCGCTCTCTCGGCCCATGGGCCCCATCCCATCCGACGGTCGGTCGTTAATTTTTCCAAGGCTCGAAATCATCGTTTACTGACCCTGCAATCACCACCCGACCTTTTCCCGTGCTTTGGCCTCACTCGCACGCTATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCCACTACTACAGCTCAAGCACGCTTAACTCTGGAGTTCTTTCTGGATGTGCTCCGGAAAAGGTAAGTCAACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTTCACATATCACAATTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

1598420  

End:

1598750

Strand:

+

>ChrB01_LTR-Cassandra_7

TGTAACATCCCGAGTTGTGATATGTGGAAAGGCTTAAGAGAATTGATTTGGCTACCTATGTCACCAAAGTTGACTTACCTTTTCGAGCACATCCCGAAGAACTCCGAGTTAAGCGTGCTTGAGCTGAAGTAGTGGAAGGATGGGTGACCTATCGAAGTGATTCGCGATAGCGTGCGAGTGAGGCCAAAGCACGGGGAAAGGTCATGTGGTGATTGCAGGGTTAGTAAACAATGATTTCGAGCCTTCGGAATTTAACGACCGACCGTCAGAGGGAATGGGGCCCACGGGCCGAGAGAGCGGACGTGGGTGGCCCATTAGCCGTGGGCGGTCG

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

338

Start:

2858338  

End:

2858675

Strand:

-

>ChrB01_LTR-Cassandra_8

TGTAATGTCCTGACCGCCCACAACCGCCCACAGTTAATAGGTCACACATATCAGCTCTCTTGATCTGTGGGTCCCATCCTGTCTGACGGACCATGCGTTATTTTTTCCAAGACCCGAAAGTCTTGTTTACTGATCCTGCAATCACCACATGACCTTTCCCCGTACTTTGATCTCACTCGCACGCTATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCCACTATTCCAACTCAGGCACGCTTAACTCTGGAGTTCTGAACGGATGTTTGCCAGAAAAGGTAAGCGCACTTTGATGATATATGTAGACAAATCAATTCTCTTAAGCCTTTTCATAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

321

Start:

2859445  

End:

2859765

Strand:

-

>ChrB01_LTR-Cassandra_9

TGTAGCGCCCGGCCGCCCATGGCTAATGGGCCACCCATGCCCGCTCTCTCGCCCGTGGACCCCATCTCATTCCCACGGTCGGTCCGTCAATTTTTCCGAAGGCTCGAAATCATTGTTAATCGACACCGCAATCACAATGAGACCTTTCCCCGTGCTTTGGCCTCACTCACACGATATCGCTAATCACTTCCCGATAGTCACCCATCCTTCTACTACTCCACCAAGCACGCTTTAACTCGAGTTCTTTCGATGTGCTTCAGAAAAGTAAGTGCACTTTAATGACATAGGTAGACAAATCAATTCTCTTAAGCCTTTTCATAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

309

Start:

2860520  

End:

2860828

Strand:

-

>ChrB01_LTR-Cassandra_10

TGTAGCGCCCGGCCGCCCATGGCTAATGGGCCACCCATGCCCGCTCTCTCGGCCCGTGGACCCCATCTCATTCCCACGGTCGGTCCGTCAATTTTTCCGAAGGCTCGAAATCATTGTGTACTGACACTGCAATCACAACAAGACCTTTCCCCGTGCTTTGGCCTCACTCACACGATATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCTACTACTCCACCAAGCACGCTTAACTCGAGTTCTTCTAGATGTGCTTCAGAAAAGTAAGTGCACTTTAATGACATAGGTAGACAAATCAATTCTCTT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

351

Start:

2966551  

End:

2966901

Strand:

-

>ChrB01_LTR-Cassandra_11

TATAACGACCCGATCTGCCTACGACTAATGGGCCATACACGCCCGCTCTCTCGGCTTGTGGGCCCCATCCTATCTGACGGTCGGTCGTTAATAATTCCGAAAGGTTCGAAATCATTGTTTACTGACCCTGCAATCACCACATGATCTTTCTCCGTGCTTTAGCCTCACTCGCACGATATCGCGAATCACTTCCCGATAGGTCACCCATCATTCCACTACTCCAGCTCAATCACGCTTAACTCTAGAGTTCTTTCAGGATGTGTTCCAGAAAAAGTAAGTCGACCTTGGTGACATAAGTAGCCAAATCAATTCTCTTAAGCCTTTCCACATATCACAACTCGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

352

Start:

2967007  

End:

2967358

Strand:

-

>ChrB01_LTR-Cassandra_12

TATAACGCCCCGACCGCCCACGGCTAATGGACCACCCATGCCCGTTCACTCGGCCCGTGGGTTCCATCCCATCTGACGGTCGGTCGTTAATAATTCCGAAAGGTTCGAAATCATTGTTTACTGATCTTGCAATCACCACATGATCTTTTCCGTACTTTGGTCTCACTTTCGTGCGATATCGCGAATCACTTTCCGATAGGTCACCCATCCTTCCACTACTCCAGCTCAAGCACGCTTAACTCTAGAGTTCTTTCAGGATGTGCTCCGGAAAAGGTAAGTCGACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCATATATCACAACTCTGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

346

Start:

2967460  

End:

2967805

Strand:

-

>ChrB01_LTR-Cassandra_13

TATAGCGCCCGACCTACGGCTAATGGACCACCCATGCCCGTTCACTCGGCCCGTGGGTTCCATCCCATCTGACGGTCGGTCGTTAATAATTCCGAAAGGTTCGAAATCATTGTTTACTGATCTTGCAATCACCACATGATCTTTTCCGTACTTTGGTCTCACTCGTACGATATCGCGAATCACTTTCCGATAGGTCACCCATCCTTCCACTACTCCAGCTCAAGCACGCTTAACTCTAGAGTTCTTTCAGGATGTGCTCCGGAAAAGGTAAGTCGACTTTGGTGACATAGGTAGCCAAATCAATTCTCTTAAGCCTTTCCATATATCACAACTCTGGGATGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

319

Start:

3339814  

End:

3340132

Strand:

-

>ChrB01_LTR-Cassandra_14

TGTAATGTCGACCCGACAACCGCCCACAGTTAATAGGTCACACATATCGACTCTCTTGATCTGTGGGTCCCATCCTGTCTGACGGACCATCGCGTTATTTTTCCAAGACCGAAAGTCTTGTTTCGCGATCCCGATCACCATGACCTTTCCCGTACTTTGATCTCACTTTCGCTTATCGCGAATCACTTCCCGATAGTCACCCATCCTTCCACTATTCCAACTCGTGCAGCAACTCGAGTTCTCGGCGGATGTTTGCGGAAAAGGTAAGCGCCTTTGATGATATATGTAGACAAATCAATTCTCTTAAGCCTTTTCATAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

328

Start:

3340888  

End:

3341215

Strand:

-

>ChrB01_LTR-Cassandra_15

TGTAGCGCCAGGCCGCCCATGGCTAATGGGCCACCCATGCAGCTCTCGGCCCGTGGACCCCATCTCATTCCGCGGTCGGTCCGTCGATTTTTCCGGAAGGCTCGAAATCATTGTTAATCGACACCGCAATCACAACAAGACCTTTCCCGTGCTTTGGCTCACTCACACGATATCGCGAATCACTTCCGATAGGTCACCCATCCTTCTACTTTCCACCAAGCACGCTTAACTCTGGAGTTCTTTCTAGATGTGCTTCCGAAAAAGTAAGTGCACTTTAATGACATAGGTAGACAAATCAATTCTCTTAAGCCTTTCCATATATCACAAC

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

300

Start:

3341321  

End:

3341620

Strand:

-

>ChrB01_LTR-Cassandra_16

TGTAACTCCCCAGGCCATGCAATGGGCCACCGGACTGTTCTCTCGGCCCATAGATCCCATCTGTCGGTAGGTGTGTTAATTTTTCAAAGATCCGAGAGTCTTGTTTACTGACCCTGTAATCACCACATGACATTTTCCCATGTTTTGGCCTCATTCGCACGCTATCGCGATCACTTCCCGATAAGTCACCCATCCTTCCACTACTTCAGCTCAAGAACGCTTAACACTGGAGTTCTAAACGAATGTTTGCCGGAAATGGTAACACACTTTAATGACATAGATAAGCAAATCAATTCTCTT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

113

Start:

6128577  

End:

6128689

Strand:

+

>ChrB01_LTR-Cassandra_17

AGTGGTATCAGAGTCAAACTTAGATGAGTGTGGAGTCAGTGAGGGCTCACACTAACATTGGTTACAATCTTAGGGCGCAACATGGACATTGCGTTCTTTGAGAAGAGGTGAAT

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

237

Start:

6128690  

End:

6128926

Strand:

+

>ChrB01_LTR-Cassandra_18

TGTAACATCCCAGTTTGTGATATATGTTGGAATGCTTAAAATAATTGATTTGGCTACCTATGTCACCAAAATACACTTAAATTTTTTGGGAACACATCCATTTAAAACTCCTGAGTTAAACTTGTTTGGGTTAGAGTAGGAAAATGATGAGTGATCTGTTGAGGAAATGATTCGTGATATCGTACGAATGAGGTCAAAGTACGGAAAAAGATTATATGGTAATTGTAAGGTTAGTAA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

294

Start:

6260746  

End:

6261039

Strand:

+

>ChrB01_LTR-Cassandra_19

GTATATGGAAAGATTTAAAAGAATTGATTTGTCTATATATGTCATTATTTAATTTTTCGGGAGCACATCCATTTCGAGTAGTCTAAGGATGGGTAATTTATTGGGAATTGTTTCACGATACCATACAAGTGAGACCAAAGCACGGGGAAATGTCATCTGGTGATTGCAGGGTCAGTAAACATGACTTTTAATTTTTTGGAAAATTAACGCATCATCCGTCAGACGGAATGGAATCCACGAATCGAATGAATAGACTTGAATGATCCATTAACCATGGGTGGTCAAGACGTTACA

Brassica carinata (v1.0)

ID:

ChrB01_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

6350784  

End:

6351132

Strand:

+

>ChrB01_LTR-Cassandra_20

TGTAACATCCCGAGTTGTGATATATGGAAAGGCTTAAGAGGATTGATTTGGCTACCTATGTCACCAAAGTTGACTTACCTTTTCCGGAGCACATCCTGAAAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGTCGTGGAAGGATGGGTGACCTATCGGGAAGTGATTCGCGATAGCGTGCGAGTGAGGCCAAAACACGGGAAAAGGTCATGTGGTGATTGCAGGGTCAGTAAACAATGATTTCGAGCCTTCGGAAATTTAACGACCGACCGTCGGATGGGATGGGGCCCACAGACCGAGAGAGTGGGCGTGGGTGGCCCATTAGCCATGGGCGGGTCGGGGCGTTATA