ID Class Order Superfamily Length Start End Strand View
FJVB01000019.1_LTR-Cassandra_41 RetrotransposonsLTRLTR-Cassandra188432848433035-
FJVB01000019.1_LTR-Cassandra_42 RetrotransposonsLTRLTR-Cassandra11712109701211086-
FJVB01000019.1_LTR-Cassandra_43 RetrotransposonsLTRLTR-Cassandra16312144771214639-
FJVB01000019.1_LTR-Cassandra_44 RetrotransposonsLTRLTR-Cassandra34813524351352782+
FJVB01000020.1_LTR-Cassandra_45 RetrotransposonsLTRLTR-Cassandra29814622731462570-
FJVB01000020.1_LTR-Cassandra_46 RetrotransposonsLTRLTR-Cassandra31814625671462884+
FJVB01000022.1_LTR-Cassandra_47 RetrotransposonsLTRLTR-Cassandra358607034607391+
FJVB01000022.1_LTR-Cassandra_48 RetrotransposonsLTRLTR-Cassandra26713158081316074-
FJVB01000023.1_LTR-Cassandra_49 RetrotransposonsLTRLTR-Cassandra357540740541096+
FJVB01000023.1_LTR-Cassandra_50 RetrotransposonsLTRLTR-Cassandra110541099541208+
FJVB01000023.1_LTR-Cassandra_51 RetrotransposonsLTRLTR-Cassandra357541209541565+
FJVB01000024.1_LTR-Cassandra_52 RetrotransposonsLTRLTR-Cassandra3577866179017-
FJVB01000024.1_LTR-Cassandra_53 RetrotransposonsLTRLTR-Cassandra1127901879129-
FJVB01000024.1_LTR-Cassandra_54 RetrotransposonsLTRLTR-Cassandra3577913079486-
FJVB01000026.1_LTR-Cassandra_55 RetrotransposonsLTRLTR-Cassandra355348997349351+
FJVB01000026.1_LTR-Cassandra_56 RetrotransposonsLTRLTR-Cassandra112349538349649+
FJVB01000026.1_LTR-Cassandra_57 RetrotransposonsLTRLTR-Cassandra169349650349818+
FJVB01000026.1_LTR-Cassandra_58 RetrotransposonsLTRLTR-Cassandra211350186350396+
FJVB01000027.1_LTR-Cassandra_59 RetrotransposonsLTRLTR-Cassandra93710516710608-
FJVB01000027.1_LTR-Cassandra_60 RetrotransposonsLTRLTR-Cassandra113711356711468-

< 3 4 5 6 7 > Total 42


Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

188

Start:

432848  

End:

433035

Strand:

-

>FJVB01000019.1_LTR-Cassandra_41

TATAATGCCCTACCGTCCCTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCAGGGGCCCACCCCTGTCCAACGGCCGGTCTGATACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTTCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCG

Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

117

Start:

1210970  

End:

1211086

Strand:

-

>FJVB01000019.1_LTR-Cassandra_42

TGTAACTCCCTGACCGTCCAAGCCAGTGAGCACCCATGTCTTCTTTCGAGCCCGTGGGCCCCACTTCTGTTTGACGGTCGGTTTGCTACGTCCGAGAGGCTTTAAAGACTTGTTTAC

Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

163

Start:

1214477  

End:

1214639

Strand:

-

>FJVB01000019.1_LTR-Cassandra_43

ACATGATCTTTCTCCGTGTTTTGTGCTCACTCACAAGGTTCCGAGTTTGACAATCACTATCCGGAAGGTCACCCATTCTGAAATCGCTCGAGCTCAAGTACTCTTAACTGTGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCATTCTGGTGACATA

Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

1352435  

End:

1352782

Strand:

+

>FJVB01000019.1_LTR-Cassandra_44

CCGGTTTCAGGAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACAAAAGTACACTTATCTTTTCGGTCAACCATCCTGAGAGAACTCCACAATTAAGCGTGCTTGGGCTGGAGTAGTTTTAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCCGGACGTAGCGGACCGGCCGTCGGACAGGGGTGGGCCCATGGGCCCGAGAGAGGACGTGGAGCCCACTAGTAGGGATGGACGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000020.1_LTR-Cassandra_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

298

Start:

1462273  

End:

1462570

Strand:

-

>FJVB01000020.1_LTR-Cassandra_45

TATAACATTCTGACCACCTTTACCGGTGAACACATATCTTTTCTCGGACATGTGGGTTTTATCTCTGTCCAACGGTTGGTTTGTTATGTCCGGAAGACTTTAAAGACTTGTTTACCGACCCTACAAATCACCAGTGATTGTTTCTCGTGTTTTGTCTTCACTCACACGGTTCTGACAATCACTTCCCAGAAAGTCACCCATCCTGAAATTGTTCTAGTACAAGCACGCTTAACTGTAGAGTTCTCTCATGACAGTTGACCGAAAAGATAAGTGCACTTTTCTGACATGGGTGGCCAAA

Arabidopsis halleri (v2.2)

ID:

FJVB01000020.1_LTR-Cassandra_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

1462567  

End:

1462884

Strand:

+

>FJVB01000020.1_LTR-Cassandra_46

CAAAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCATTTATCTTTTCGGTCAACTATCTTGAGAAAAATCCACAGTTAAGCGTGTTTAGGCTTGAGCAATTTCAGGATGAGTGAATTTTCTGGGAAGTGATTGTCGGAACCGTGTAAGTGAGGACAAAACACGGAGAAAGATCACGTGATGATTTGTAGGATCGGTAAACAAATCTTTAAAACCTCCTCAACTTAATGGATCGAGCATCGGATAGAGTAACACCCACGGGCCCGAGAGAAGATGTAGATGCTCATTAATAGGAACGGTCGGATCG

Arabidopsis halleri (v2.2)

ID:

FJVB01000022.1_LTR-Cassandra_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

358

Start:

607034  

End:

607391

Strand:

+

>FJVB01000022.1_LTR-Cassandra_47

TGTAACACCCCGGTTTCAGGAATATGGTGGTGCATGCGGAGAGGTTTAAAATAATTGATTTGACCACCTATATCACCAAAATGCACTTATMTTTTCGGTCAACTGTCCTGAGAGAACTCCACAGTTAAGCGTGTTTGGGCTGGAGTAGTATCAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAGTGAAGACAAAACACAGAGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAATCTCCCGGACGTAACGGACCGATCGTCGAACAGGGGTGGGGCCCATAGGTCAGAGAGAGGCGTGGGTACTCACTGGTAGGGGCGGTCGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000022.1_LTR-Cassandra_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

267

Start:

1315808  

End:

1316074

Strand:

-

>FJVB01000022.1_LTR-Cassandra_48

TGTCCGATGGTCGGTTCGCTATGTTCGGGAGGTTTTTAAGATTTGTTTACCGGCCATACAAACCACAACACGATATTTTTCCGTGTTTTGTCTTCACTCACACGGTTCCGACAATCACTTTTCATAAAGACACTCATCCTGAAATTGCTCCACCTCAAGCACGCTTAATTGTGGAGTGTTCTGAAGACGATTGACCGAAAAGATAAGTGTATTTTGATGATATAGGTGGCCAAATCAATTTTTTAAAACCCTCCACATGCATGACCA

Arabidopsis halleri (v2.2)

ID:

FJVB01000023.1_LTR-Cassandra_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

540740  

End:

541096

Strand:

+

>FJVB01000023.1_LTR-Cassandra_49

TGTAACACCCCGGTTTCAGGAATATGGTGGTGTATGCGAAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACTGTCCTAAGAGAACTCCACAGTTAAGCGTGCTTGAGCTGGAGTAGTTTTAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAGTGATGATAAAACACAGGGAAAGATCATATGGTGATTTGTAGGGTCGGTAAACAAGTTTTTAAAACCTCCCGGACGTAGCGGGCTGGCCGTCGGACAGGGGTGGGCCCATGGGCCCGAGAGAGGACGTGGGGCCTACTGGTAGGGACGGTCGGAGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000023.1_LTR-Cassandra_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

541099  

End:

541208

Strand:

+

>FJVB01000023.1_LTR-Cassandra_50

TGGTATCAGAGACGAACCCAGACGAGTGTGGAGTCAAGAGGGCTCACACCGTAGGGGGTGACGGTCTTGGTGCGCAACGAGGACGTTGCGATCTGTTAGTGGGGGTGAAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000023.1_LTR-Cassandra_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

541209  

End:

541565

Strand:

+

>FJVB01000023.1_LTR-Cassandra_51

TGTAACACCCCGGTTTCAGAAATATGGTGGTGCATGTGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAATGCACTTATCTTTTCGGTCAACTATCCTAAGAGAACTCCACAGTTAAGCGTACTTGAGCTGAAGTAGTTTCAGGATGGGTGACCTTCTGGGAAGTGATTGTCGGAACTGTGTGAGTGAGGATAAAACACAGGGAAAAATCATGTGGTGATTTATAGGGTCGGTAAACAAGTTTTTAAAGCCTCCCGGACATAGCGGGCTGACCGTCGGACAGGGGTGGGTCCATGAGCCCGAGAGAGGACGTGGGACCCACTGGTAGGGACGGTCGGAGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000024.1_LTR-Cassandra_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

78661  

End:

79017

Strand:

-

>FJVB01000024.1_LTR-Cassandra_52

TGTAACGCCCCGACCGTCCCTACCAGTGGGCCCCACGTCTTCTCTCGGACCCATGGGCCCACCCCTGTCCGACGGCGGGTCCGCTACGTCCGGAAGTCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAATTGCTCCAGCTCAAGCACCCTCAACTGTGGAGTTCTCTCAGGATCGTAGACCGAAAAGATAAGTGCACTKTGGTGACATAGGTGGCCAAATCAATTCTCTTAAACCTCTCCGCATGWACCACCATATTCCTGAAATCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000024.1_LTR-Cassandra_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

79018  

End:

79129

Strand:

-

>FJVB01000024.1_LTR-Cassandra_53

ATTCACCCCCACTAACAGATCGCAATGTCCTCGTTGCGCACCAAGATCGTCACCCCCGACGGTGTGAGCCCTCTTGACCCTACACTTGCCTGGGTTCGGCTCTGATACCACT

Arabidopsis halleri (v2.2)

ID:

FJVB01000024.1_LTR-Cassandra_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

79130  

End:

79486

Strand:

-

>FJVB01000024.1_LTR-Cassandra_54

TGTAACACCCGGACCGTCCCTACCAGTGGGCCCCACGTCCTCTTTCGGGCCCATGGGCCCACCCCTGTTCGACGGCGGGTCCGCTACGTCCGGAAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCATCACATGATCTTTCCCTGTGTTTTGTCATCACTCACACAGTTCCGACAATCACTTCCCAGAAAGTCACCCATCCTGAAATTGCTCCAGCTCAAGCACCCTTTACTGTGGAGTTCTCTCAGGACCGTTGACCAAAAAGATAATTGCATTTTGGTGAAATAGGTGGCCAAATCAATTCTCTTAAACCTCTCCGCATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000026.1_LTR-Cassandra_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

348997  

End:

349351

Strand:

+

>FJVB01000026.1_LTR-Cassandra_55

TGTAACACCCCGGTTTCAGGAATATGGTGATGCATGCGGAGAGGTTTAAAAAAATTGATTTGGCCACCTATGTCACCCAAAGTGCACTTATCTTTTTGGTCAACTGTCCTGAGAGAACTTCACAGTTAAGCGTGCTTGGACTGGAGTAGTTTCAGGATGGGTGACCTTCTGGGAAGTGATTGACGGAACTGTGTGAGTGATGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCGGACGTAGCGGACCGGCCGTCGGACAAGGGTGGCCCATGGGCCCGAGAGAGGACGTGGGGCCCCCTAGTAGGGACGGTCGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000026.1_LTR-Cassandra_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

349538  

End:

349649

Strand:

+

>FJVB01000026.1_LTR-Cassandra_56

AGTGGTATCAGAGCCGAACCCAAACGAGTGTGGAGTCAAGAGGGCTCACACCGTAGGGGGTGACGGTCTTGGTGCGCAACGAGGACGTTGCGATCAGTTAGTGGGGGTGAAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000026.1_LTR-Cassandra_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

169

Start:

349650  

End:

349818

Strand:

+

>FJVB01000026.1_LTR-Cassandra_57

TGTAACACTCTAGTTTCAGGAATATGGTGGTGCATGCGGAGAGGTTTAAAAAAATTGATTTGGCCACCTATGTCACCCAAAATGCACTTATCTTTTCGGTCAACTGTCTTGAGAGAACTCCACAGTTAAGCATGCTTGGACTAGAGTAGTTTCAAGCAGTGGCGGACCT

Arabidopsis halleri (v2.2)

ID:

FJVB01000026.1_LTR-Cassandra_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

211

Start:

350186  

End:

350396

Strand:

+

>FJVB01000026.1_LTR-Cassandra_58

TGGTTTCAAGATAGGTGACCTTCCGGGAAGTGATTGACGGAACTGTGTGAGTGAGGACAAAACACAGGAAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCGGACGTAGCGGACCGACCGTCGGACAGGGATGGGCCCATGAGCCCGAAAGAGGACGTGGGGCCCACTGGTAAGGACGGTCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000027.1_LTR-Cassandra_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

93

Start:

710516  

End:

710608

Strand:

-

>FJVB01000027.1_LTR-Cassandra_59

TGTAACGCTCCGACCGTTCCTACCAGTAGGTCCCACGTCCTCTCTCGGGCCCATGGGCCCACCTCTGTCCGACGGTCGGTCCGCTACGTCCGG

Arabidopsis halleri (v2.2)

ID:

FJVB01000027.1_LTR-Cassandra_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

113

Start:

711356  

End:

711468

Strand:

-

>FJVB01000027.1_LTR-Cassandra_60

ATTCACCCCCACTAACAGATCGCAACGTCTTCGTTGCGCACCAAGACCGTTACCCCCCTACGGTGTGAGCCCTCTAGACTCCACACTCGCCTGGGTTCGGCTCTGATACCACT