ID Class Order Superfamily Length Start End Strand View
FJVB01000018.1_LTR-Cassandra_21 RetrotransposonsLTRLTR-Cassandra358593704594061+
FJVB01000018.1_LTR-Cassandra_22 RetrotransposonsLTRLTR-Cassandra296663477663772+
FJVB01000018.1_LTR-Cassandra_23 RetrotransposonsLTRLTR-Cassandra359722758723116-
FJVB01000018.1_LTR-Cassandra_24 RetrotransposonsLTRLTR-Cassandra34510824591082803+
FJVB01000018.1_LTR-Cassandra_25 RetrotransposonsLTRLTR-Cassandra10810828081082915+
FJVB01000018.1_LTR-Cassandra_26 RetrotransposonsLTRLTR-Cassandra36010829161083275+
FJVB01000018.1_LTR-Cassandra_27 RetrotransposonsLTRLTR-Cassandra33011426011142930-
FJVB01000018.1_LTR-Cassandra_28 RetrotransposonsLTRLTR-Cassandra35912351501235508-
FJVB01000018.1_LTR-Cassandra_29 RetrotransposonsLTRLTR-Cassandra36212373771237738+
FJVB01000018.1_LTR-Cassandra_30 RetrotransposonsLTRLTR-Cassandra36012736241273983-
FJVB01000018.1_LTR-Cassandra_31 RetrotransposonsLTRLTR-Cassandra34913104791310827-
FJVB01000018.1_LTR-Cassandra_32 RetrotransposonsLTRLTR-Cassandra10213186831318784+
FJVB01000018.1_LTR-Cassandra_33 RetrotransposonsLTRLTR-Cassandra34113239891324329-
FJVB01000018.1_LTR-Cassandra_34 RetrotransposonsLTRLTR-Cassandra11213243301324441-
FJVB01000018.1_LTR-Cassandra_35 RetrotransposonsLTRLTR-Cassandra14413244421324585-
FJVB01000018.1_LTR-Cassandra_36 RetrotransposonsLTRLTR-Cassandra21913266591326877-
FJVB01000019.1_LTR-Cassandra_37 RetrotransposonsLTRLTR-Cassandra1001903519134-
FJVB01000019.1_LTR-Cassandra_38 RetrotransposonsLTRLTR-Cassandra3491913519483-
FJVB01000019.1_LTR-Cassandra_39 RetrotransposonsLTRLTR-Cassandra360432376432735-
FJVB01000019.1_LTR-Cassandra_40 RetrotransposonsLTRLTR-Cassandra112432736432847-

< 2 3 4 5 6 > Total 42


Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

358

Start:

593704  

End:

594061

Strand:

+

>FJVB01000018.1_LTR-Cassandra_21

TGTAACACCCCGGTTTCAGAAATACGGTGGTGCATGCAGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATATTTTCGGTCAACTGTCCTGAGAGAACTCCATAGTTAAGGGTGCTTGAGCTGGAGCAATTTCAGGATGGGTGACCTTCCGGGAAGTAATTGTCGGAATTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAATTCTTTAAAGCCTCCCGGACGTAGCGGACCGGCCGTCAGACATGGTGGGCCCATGGACCGAGAGAGGACGTGGGGCATATTAAGAGAAGTGTGGCGGTCGGGACGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

296

Start:

663477  

End:

663772

Strand:

+

>FJVB01000018.1_LTR-Cassandra_22

TTTATATGGTTATGTATGTCACAAAGTGCATTTATTTTTTTGGTTAAACATTTTGTGAGAACTACATAGTTAAGCATGCTAGGAATTTCATGATAGATGGCCTATATGGAGTGATTTTCGATACCATGTGAATGAGTATAATACACTAAGAAAAATCATGTGCTAATTTGTGGCATCGGCAAAACAAGTTTTTAAATCTTTTAGAAGTAACGAACGGACCGTTAGACAAAAGTGAAGTCGATGGAGACCGAGAGGGAGTGTGGAGATCCATATACAGTGGCGGTCTAAGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

722758  

End:

723116

Strand:

-

>FJVB01000018.1_LTR-Cassandra_23

TGTAACGTCCCGACCGCCATCTCTCTTAATGGGCTCCACGTCCTCTCTCGACCCGTGGGCCCACCATCTTCCGACGGCCGGTCCGCTACGTCCGGGAGGCTCTAAAGACTTGTTTACCGACCCTACAAATCATCACATGATTCTTCGCTGTGTTTTGTCCTCACTCATACAATTCCAACAATCACTTCCCGGAAGGTCACCCATCCTGAAACTTTCTCAGCTCAATCACGCTTAACTATGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATTTTCCTAAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

345

Start:

1082459  

End:

1082803

Strand:

+

>FJVB01000018.1_LTR-Cassandra_24

GGTTTCAGTATTATTTTTTTTGTACATGCGGAAAGGTTTGAAATAATTGATTTGGCCACCTATGTCACCAAAAGTGTACTTATCTTTTTGGTCAAACGTCTTGAGGGAACTCCACAGTTAAGCGTGCTTGAGCTGAGAAAGTTTTAGGATGGATGACCTTCCGGGAAATAATTGTCAGGAAACTCACACAAAACACAAAAAAATATCATGTGGTGATTTGCAGGGTCGCTAAACAAGTCTTTAAAGCCTCAGAGACGTAACGGACTGACCGTTAGACAGAGGTGGGGCCCATGGGCCTGAGAGAAGACGTGGGTGCTTATCGGTAAGGGTGGTCAGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

108

Start:

1082808  

End:

1082915

Strand:

+

>FJVB01000018.1_LTR-Cassandra_25

GTATCAAAGCCGAACCCAGAAGTGTGTGGAGTCAAGAGGGCTCATACCATCGGAGGTGACGGTCTTGGTGCGAAACGAAGACGTTGCGATCTGTTAGTGGGGGAGAAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

360

Start:

1082916  

End:

1083275

Strand:

+

>FJVB01000018.1_LTR-Cassandra_26

TGTAGCACCCCGATTTCAGGAATATGGTGGTACATGCGGAGAGGTTTGAAAAAATTGATTTGGCCACCTTTGCAACTAAATGTGCACTTATCTTTTCGGTCAAACGTCTTGAGAGAACTCCACAGTTAAGCGTGCTTGATCTAAGAAAGTTTCAAGATGGGTGATCTTCCGAGAAGTGATTGTTGAAACCGTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGATCGGTAAAAAAGTATTTAAAGCCTTCCGGATGTAGCGGACCGACCGTCAGATAGAGATGAGACCCACGGGCCCGATAGAAGACATAGGTGTTCATCGGTAGGGGCGGTCGGAACGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

330

Start:

1142601  

End:

1142930

Strand:

-

>FJVB01000018.1_LTR-Cassandra_27

TGTAATGCTCTAACCACCATCATATGTAGACCCTATATCTTCTCCAAGTCTCTGGACTCCACACTCGTCCGACGGCATGTGTACTATTTCGGGAGGCTTTAAGACTTGTTTACCAATCCTATAAATTATCACATATTTCTTATGTTTTATCCTCATTCATACGATAGCGGAAATCACTTTCTAGTATATCACATATCTTAAAATTGCACCACCTCAAAGTACGCTTAGTTCTGGAATTCCGAAAATATGTTTGACCGAAAAAATAATTGCACTTTGAAAACATAAGTAACCAAATCAATTCTCAAAACATCTCCTTATAAACCATCATAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

1235150  

End:

1235508

Strand:

-

>FJVB01000018.1_LTR-Cassandra_28

TGTGACGCCCCGACCGCCCCTACTAGTGAGCATCTACGTCCTCTCTCGGGTACGTGGGTCCCACCCCTGTCTGACGGCCGGTCCGCTACGTCCGAGAGGCTTTAAAAACTTATTTATCTACCCTACTAATCACCACATGATCTTTCTCCGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCTCGGAAGGTCACCTATCCTGAAATTGCTCCAGCCCTAGCACGCTTAACTGTGGCGCTCTTTCAGGACGTTTCACCGAAAAGATAAGTGCACTTTGGAGACATAGGTGGCCAAATCAATTCTTTTAAACATCGCCGCATGCACCACCATATTCCTGAAACCGGGGTATTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

362

Start:

1237377  

End:

1237738

Strand:

+

>FJVB01000018.1_LTR-Cassandra_29

TGTAACACCCCGGTTTCAAGAATATGATGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAATGCACTTATCTTTTCGGTCAACTGTCTTGAGAGAACTCCACAGTTAAGCGTGCTTGGGCTGGAGCAATTTCAGGATGGGTGACCTTCCGCGAAGTGATTGTCGGAACTGTGTGAGCGAGGACAAATCACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCCAGACGTAGTGGACCGACCGTCGGACACGGGTGGGCCCATGGGCCTGAGAGAGGATGTGGGGCCCATTAAGAGAGGTGTGGCGGTCGGAGCATTATA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

360

Start:

1273624  

End:

1273983

Strand:

-

>FJVB01000018.1_LTR-Cassandra_30

TGTAACGCCCTAACCGCCATCTCTTTTAATGGGCCCAACATCTTTTCTCGGCCCGTGGGCTCACCATCTTCCGGCGGCCGGTTCGCTACGTCCAGAAGGCTTTAAAGACTTGTTTACCGGCCCTACAAATCACCACATGATATTTTTCTGTGTTTTGTCCTTACTCACACAGTTCCGATAATCTCTTCCCAGAAGGTCACTCATCCTGAAATTGCTCCAGCTCAAACACACCCTTAACTGTGGAGTTCTCTCAAGACAGTTGACCGAAAATATAAGTGCACTTTGATGATATAGGTGGCCAAATCAGTTCTTTTAAATCTCTCCACATGCACCACTAATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

1310479  

End:

1310827

Strand:

-

>FJVB01000018.1_LTR-Cassandra_31

TGTAACGCCCCGAACGCCCCTGCCAGTGAGCACCCACGCCTCTCTCGGGCCCGTGGGCCCCACGCCTGTCCGATGACCGGTCTGCTACGTCCGAGAGGCTTTAAAAACTTGTTTACCGACCCTACAAATCACCACATGATTTTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCTGGAAGGTCACCTATCCTGAAACTACGCCAGCCCAAACACGCTTAACTATGGAGTTCTCTCAGGACGGTTGACCGAAAAAATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTTTTTTAAACCTCTCTGCATGTATCACCATATTCTTGAAACCAG

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

102

Start:

1318683  

End:

1318784

Strand:

+

>FJVB01000018.1_LTR-Cassandra_32

AGAGCCTCTAGGACGTAGCGGACCGGCCATCGGACATGCATGGGGCCCACGGGCCCGAGAGAGGCGTGGGTGCTCACTGGCAGGCGCGTTCGGAGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

341

Start:

1323989  

End:

1324329

Strand:

-

>FJVB01000018.1_LTR-Cassandra_33

TGTAACGCCCCGAACGCCCCTACCAGTGAGCACCCACGCCTCTCTCGGGCCCGTGGGCCCCACGCATGTCCGATGGCCAGTCCGCTACGTCCGAGAGGCTTTAAAAACTTGTTTACCGACCCTACAAATCACCACATAATTTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCAGAAGGTCACCCATCCTGAAACTACTCCAGCCCAAGCACGCTTAACTATGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCTAAATCAAATGATGCACCACCATATTCCTAAAATCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

1324330  

End:

1324441

Strand:

-

>FJVB01000018.1_LTR-Cassandra_34

ATTCACCCCCACTAACAGATCGCAACGTCTTCGTTGCGCACCAAGACTGTTACCCACTACGGTGTGAGCCCTCTTGACTCTACACTCGTCTGGGTTCGGCTCTGATACCACT

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

144

Start:

1324442  

End:

1324585

Strand:

-

>FJVB01000018.1_LTR-Cassandra_35

TGTAATGCCCCGACCGTCCCTTCCAGTAGGCTCCACGTCCTCTCTCGGGCCCATGGACCCATCCCTGTCCGACGGCCGGTCCGCTACGTCTGGGAGGCTTTAATAGACTTTTTTACCGACCCTACAAATCACCACATGATCTTT

Arabidopsis halleri (v2.2)

ID:

FJVB01000018.1_LTR-Cassandra_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

219

Start:

1326659  

End:

1326877

Strand:

-

>FJVB01000018.1_LTR-Cassandra_36

ATCTTTCTCTGTGTTTTGTCCTCACTCACACAGTTGCGACAATCACTTCTCGGAAGGTCATCCATCCTGAAACTACTCTAGCCCAAACACGTTTAACTATGGAGTTCTCTCAAGACAGTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAAATCTTTTAAACCTCTCCGTATGTACCACCATATTCCTGAAATCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

100

Start:

19035  

End:

19134

Strand:

-

>FJVB01000019.1_LTR-Cassandra_37

TAACAGATCGCAACGTCCTCGTTGGGCACTAAGACCATCACCCCCGGCGGTGTGAGCCCTCTTGACTCCACACTCGCCTGGGTTCGGCTCTGATACCACT

Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

19135  

End:

19483

Strand:

-

>FJVB01000019.1_LTR-Cassandra_38

TGTAACACCCCGACCGTCCCTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCACCCCTATCCGACGGCCGGTCTGATATGTCCGGGAGGTTTTAAAAACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTTTGTTTTGTCCTCACTCATACAGTTCCGACAATCACTTCCCAGAAGGTCACCCATTCTGAAACTATTCCAGCCCAAGCACGCTTAACTGTGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAAGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTTGTGAAACCGAAGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

360

Start:

432376  

End:

432735

Strand:

-

>FJVB01000019.1_LTR-Cassandra_39

TGTAACGCCCTGACCGTCCCTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCATGGGCCCATTCCTGGCCGACGGCCGGTCGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCATTCACACAGTTCCCACAATCACTTCCCGGAAGGTCACCCATCCTGAAACTACTCCAGCCCAAGAACGCTTAACTGTTAAGTTTTCTCAGAACGTTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTATTTTAAACCTCTCCACATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000019.1_LTR-Cassandra_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

432736  

End:

432847

Strand:

-

>FJVB01000019.1_LTR-Cassandra_40

ATTCACCCCCACTAACAGATCGCAACGTCCTCGTTGCGCACCAAGACCGTAGCCCCCGACGGTGTGAGCCCTCTTGACTCTACACTCGACTGGGTTCGGCTCTGATACCACT