ID Class Order Superfamily Length Start End Strand View
FJVB01000034.1_LTR-Cassandra_81 RetrotransposonsLTRLTR-Cassandra357817232817588+
FJVB01000034.1_LTR-Cassandra_82 RetrotransposonsLTRLTR-Cassandra37711220651122441+
FJVB01000035.1_LTR-Cassandra_83 RetrotransposonsLTRLTR-Cassandra356378759379114+
FJVB01000039.1_LTR-Cassandra_84 RetrotransposonsLTRLTR-Cassandra3262604026365-
FJVB01000039.1_LTR-Cassandra_85 RetrotransposonsLTRLTR-Cassandra147173812173958-
FJVB01000039.1_LTR-Cassandra_86 RetrotransposonsLTRLTR-Cassandra213175154175366-
FJVB01000039.1_LTR-Cassandra_87 RetrotransposonsLTRLTR-Cassandra361355380355740+
FJVB01000039.1_LTR-Cassandra_88 RetrotransposonsLTRLTR-Cassandra357531219531575-
FJVB01000039.1_LTR-Cassandra_89 RetrotransposonsLTRLTR-Cassandra360747030747389-
FJVB01000039.1_LTR-Cassandra_90 RetrotransposonsLTRLTR-Cassandra357758591758947-
FJVB01000039.1_LTR-Cassandra_91 RetrotransposonsLTRLTR-Cassandra228765800766027-
FJVB01000039.1_LTR-Cassandra_92 RetrotransposonsLTRLTR-Cassandra333766074766406-
FJVB01000039.1_LTR-Cassandra_93 RetrotransposonsLTRLTR-Cassandra358821120821477-
FJVB01000040.1_LTR-Cassandra_94 RetrotransposonsLTRLTR-Cassandra3562755627911+
FJVB01000040.1_LTR-Cassandra_95 RetrotransposonsLTRLTR-Cassandra972791628012+
FJVB01000040.1_LTR-Cassandra_96 RetrotransposonsLTRLTR-Cassandra293412058412350-
FJVB01000040.1_LTR-Cassandra_97 RetrotransposonsLTRLTR-Cassandra336412342412677+
FJVB01000040.1_LTR-Cassandra_98 RetrotransposonsLTRLTR-Cassandra253491345491597-
FJVB01000040.1_LTR-Cassandra_99 RetrotransposonsLTRLTR-Cassandra111493506493616-
FJVB01000040.1_LTR-Cassandra_100 RetrotransposonsLTRLTR-Cassandra347725235725581+

< 5 6 7 8 9 > Total 42


Arabidopsis halleri (v2.2)

ID:

FJVB01000034.1_LTR-Cassandra_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

817232  

End:

817588

Strand:

+

>FJVB01000034.1_LTR-Cassandra_81

TGTAACACCCCGGTTTAAGGAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAAACGTCYTGAGAGAACTCCACAGTTAAGCGTGCTTGGGCTGGAGTAGTTTCAGGATGGGTGACCTTCTAGGAAGTGATTGTCGGAACTGTGTAAGTGAGGACAAAACATAGGGAAATATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCCGGACGTAGCGGACCGGCCGTCGGACAGGGGTGGGCCCATGGGCCCGAGAGAGAACGTGGGGCCCACTGGTAAGGACGGTCGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000034.1_LTR-Cassandra_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

377

Start:

1122065  

End:

1122441

Strand:

+

>FJVB01000034.1_LTR-Cassandra_82

TGTAACATTTTGAAATCTAGAAATATGGTGATGAATAATTTTTGTAAAAAATTATTGATTTGGTCATGTCACTAAATTACATTTATTTTTTCGGTTAAATATTTTGAAAAAAACTCCATAAATAAATGTGTTTGATCTAGAGCAATTTTAAAATAAATGGTTTATAAGAAAATGAATTTTGAATAAATGTGTGGTTGACAAAAAAAAAAAAGAATTTTGAACTGTGTAAAGTGAAAACAAAATTACATGATGATTTGTAAAATCAGTAAACAAGTTTTTAAAGTGTCCAAAAATAAAGAACCGATTATTGGATAAAAAATGAACCTATAGATTGAGAGAAGACTTAAGATCCACAACCAGTGATGATCGAGACCTTA

Arabidopsis halleri (v2.2)

ID:

FJVB01000035.1_LTR-Cassandra_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

378759  

End:

379114

Strand:

+

>FJVB01000035.1_LTR-Cassandra_83

TGTAACACCCCGGTTTCAGGAATATGGTAGTGCATGCGGAGAGGTTTAAGAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACTGACCTGAGAGAACTCCACAGTTAAGGGTGCTTGAGCTGGAGCAATTTCATGATGGGTGACCTTCCGGGAAGTGATTGTCGAACTGTGTGAGTGAGAACAAAACACATAGAAAGTTCATGTGGTGATTTGTAGGGTCGGTAAACAAGTTTTTAAAGCCTCCCGGACTTAGCGGACCGGCCGTCGGACAAGGGTGGACCCATGGGCCCGAGAGAGTACGTGGACCCCACTGGTAGGGACGGTCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

326

Start:

26040  

End:

26365

Strand:

-

>FJVB01000039.1_LTR-Cassandra_84

TGTAACACCCCGACCGTCCCTACCAGTGAGCACTCACGTCCTCTCTCGAGCCCATGGATTCCACCCCTGTCCGACGGTCGGTCCGTTATATCCGGGAGGCTTTAGATCTTTCCACATGATCTTTCCCTGTGTTTTGTTCTAACTCATACAGTTCCGACGACAATCACCCATCCTGAAATTGCTCCAGTTCAAGCATGCTTAACTGTGGAGTTCTCTCAAGACGTTTGACCAAAAAGATAATTGCACTTTGCTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCTGGATGCACCATTATAATCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

147

Start:

173812  

End:

173958

Strand:

-

>FJVB01000039.1_LTR-Cassandra_85

TGTAACGCTCCGACCGTCATCTTTCTTAATGGACCCCACGTCCTCTCTCGGCACGTGGGTTCACTATCTTCCGATGGTCGGTCCGCTATGTCCGAGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTTC

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

213

Start:

175154  

End:

175366

Strand:

-

>FJVB01000039.1_LTR-Cassandra_86

CATGTGTTTTGTCCTCACTCACACAGTTCCGACAAACACTTCCCGGAAGGTCACCCATCCTGAAATTGCTCCAGCTCAAGCACGCTTAACTGTGAAGTTCTCTCAAGACAGTTGACCGAAAAGATAAGTGCATTTTGGTGACATAGGTGGCCAAATCAATTTTTTTAAACCTCTCCGCATGCACCACCATATTCCTAAAATCGGAGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

361

Start:

355380  

End:

355740

Strand:

+

>FJVB01000039.1_LTR-Cassandra_87

TGTAACACCCCGGTTTCAGGAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGAGCATTTATCTTTTCGGTCAACTGTCCTGAGAGAACTCCACAGTTAAGGGTGTTTGAGCTGGAGCAATTTCAGGATGGGTGACCTTCCGAAAAATGATTGTCGGAACTGTGTGAGTGAGGACAAAACACAGAAAAAGATCATGTGGTGATTTGTAGGGTCGGTAAATAAGTCTTTAAAGCCTCTTGGACGTAGCGGACTGGCCGTCGGACATGGGTGGGCCCACGGGCCGAAAGAGAACGTGGGGCCCATTAAGTGAGGTGTGACGGTCGGGGCATTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

531219  

End:

531575

Strand:

-

>FJVB01000039.1_LTR-Cassandra_88

TGTAACGCCCCGACCGTCCCTACCAGTAGGCCCCACGTCTTCTCTCGGACCCATGGGCCCACTCCTGTCCGATGGCCGGTCTGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCTACCCTACAAATCACCACATGATCTTCCCCTGTGTTTTGTCCTCACTCATACAGTTCCGACAATCACTTCCCGGTAGGTCACCCATCCTGAAACTACTCCAGCCCAAGTACGCTTAACTGTGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAATTGCACTTTGGTGACATAGGTGGTCAAATCAATTCTTTTAATCCTCTCCGCATACACCACCATATTCCTGAAACCGAGATGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

360

Start:

747030  

End:

747389

Strand:

-

>FJVB01000039.1_LTR-Cassandra_89

GTAACGCTCCGACCGCCACACCTCACTTAATGGACCCCACATCCTCTCTCGGCCCGTGGGCCCACCATCTTCCGATGGTCGGTCCGCTAAGTCCGGGAGACTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCTCCGTGTTTTGTTCTCACTCACACAGTTCCGACAATCACTTCGCGGAAGGTCATCCATCCTGAAACTTTCCCAGCTCAAGCACGCTTAACTATGGAGTTCTCTCAAGATAGTTGACCGAAAAGATAAGTGCACTTTGCTGACATAGGTGGTCAAATCAATTATTTTAAACCTCTCCGCATGCACCACCATATTCCTGAAACCGAGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

758591  

End:

758947

Strand:

-

>FJVB01000039.1_LTR-Cassandra_90

TGTAACGCCCCGACCGTCCCTACCAGTGGGCCCCACATCCTCTCTCAGGCCCATGGGCCCACTCCTGTCCGACGGCCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAACTACTCGAGCCCAAGCACGCTTAACTGTGGAGTTTTCTCAGGACGTTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTTCTGAAACCGGAGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

228

Start:

765800  

End:

766027

Strand:

-

>FJVB01000039.1_LTR-Cassandra_91

CCCACGTCCTCTCTCTTGGCCCGTGGACCCAACCGTGTCTGACGGCCAGTTATTTGTTTAGCGATCCTACAAATCACCACATGACCTTTCCCCATGTTTTGTTCTCATTCACACGGTTCCGACGATCATTTCACGAAATGTCACACATCCTAAAATTGCTCCAGCTGAAGCACGCTTAACTGTGGAGTTCTCTCAGGACGTTTGACCGAAAGGATAAGTGCATTATGG

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

333

Start:

766074  

End:

766406

Strand:

-

>FJVB01000039.1_LTR-Cassandra_92

TGTAACGCCCGACCGCCACCTTTTAATTAGGTCCCACGTCCTCTCTTGGCCCGTAGACCCAACCGTGTCTGATGGCCGGTTATTTGTTTAGCGATCCTACAAATCAGCATATGACCTTTTCCCGTGTTTTGTTCTCATTCACATGGTTCCGACGATCATTTCGCGGAAGGTCACACATCCTAAAATTGCTCCAGCTGAAGCACGCTTAACTGTGGAGTTCTCTCATGACGTTTGACCGAAAAGTTAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCTGCATGCACCACCATATTCCTGAAACCGGAGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000039.1_LTR-Cassandra_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

358

Start:

821120  

End:

821477

Strand:

-

>FJVB01000039.1_LTR-Cassandra_93

TGTAACGCCCCGACCGTCACCTTTCTTAATGGCCCCACGTCCTCTCTCGGCCCGTAGGCCCACCATCTCTCGACGGTCGGTCTGCTACGTCCGGGAGGCTTTAAAGACTTTTTTACCGACCCTACAAATCACCACATGATCTTTCTCTGTGGTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAACTACTCCAGCCCAAGCACGCTTAACTGTGTAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000040.1_LTR-Cassandra_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

27556  

End:

27911

Strand:

+

>FJVB01000040.1_LTR-Cassandra_94

TGTAACACCCCGGTTTCAGGAATATGGTTGTGCATGCGGAGAGGTTTAAAAGGATTGATTTGGCCACCTATGTCACCAAAGTGTACTTATCTTTTCGGTCAACTGTCCTGAGAGAACTCCACAGTTAAGCGTGCTTGGGCTGGAGTAGTTTCAGGATGGGTGACCTTCCGGGAAGTGAATGTCGGAACTGTGCGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTATTTAAAGCCTCCCAGACGTAGCGGGCCGACCGTCGGACAGGGGTGGGCCCATGGGCTCGAGAGAGGACATGGGGCCCACTGGTAGGGACGGTCGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000040.1_LTR-Cassandra_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

97

Start:

27916  

End:

28012

Strand:

+

>FJVB01000040.1_LTR-Cassandra_95

GTATCAGAGCCGAACCCAAACGAGTGTGGAGTCAAGAGGACTCACACCGTAGGGGGTGACGGTCTTGGTGCGCAACGAGGACGTTGCAATCTGTTAG

Arabidopsis halleri (v2.2)

ID:

FJVB01000040.1_LTR-Cassandra_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

293

Start:

412058  

End:

412350

Strand:

-

>FJVB01000040.1_LTR-Cassandra_96

TGTAACGCTCCGACCGTCCTTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCATGGGCCCACCTGTCCGACGGTCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATGTTTCCCTGTGTTTTGACCTCACTCACACAGTTCCGACAATCACTTCCCGGTAGGTCACCCATCCTGAAACTACTCCAGCCCAAGCACGCTTAACTGTGGAGTTCTCTCAGGACAGTTAACCGAAAAGATAAGTGCACTTTGGTGACATATGGTGG

Arabidopsis halleri (v2.2)

ID:

FJVB01000040.1_LTR-Cassandra_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

336

Start:

412342  

End:

412677

Strand:

+

>FJVB01000040.1_LTR-Cassandra_97

ATATGGTGGTGCATGCAGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACTGTCCTGAGAGAACTCCACAGTTAAGCGTGCTTGGGTTGGAGTAGTTTCAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAATTGTGTGAGTGAGGACAAAACACAGAGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCCGGACGTAGCGGACCGACCGTCGGACAGAGGTGGGCCCATGGGCCCGAGAGAGGACGTGGGGCCCACTGGTAAGGACGGTCGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000040.1_LTR-Cassandra_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

253

Start:

491345  

End:

491597

Strand:

-

>FJVB01000040.1_LTR-Cassandra_98

TGTAACGCCCCGACCGTCCCTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCATGGGCCCACCTATGTCCGACGGCCGGTCCGCTACGTCCGGGAGGCTATAAAGACTTGTTTACCGACCCTACAATTCACCACATGATTTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTTCCGGAAGATCACCCATCCTAAAACTACTCCAGCCCAAACACGCTTAACTGTGGAGTTCTCTCAGGAC

Arabidopsis halleri (v2.2)

ID:

FJVB01000040.1_LTR-Cassandra_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

111

Start:

493506  

End:

493616

Strand:

-

>FJVB01000040.1_LTR-Cassandra_99

TCCGGACAGTTGATCGAAAAGATAAGTGCACTTTGGTGACATATGTGGCCAAATCAATTCTTTTAAACATCTCCGCATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000040.1_LTR-Cassandra_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

347

Start:

725235  

End:

725581

Strand:

+

>FJVB01000040.1_LTR-Cassandra_100

TATAACATCCCGGTTTTAGGAATATGCTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAGAGTGCACTTATCTTTTCGGTCAAACGTCTTGAGAGAACTCCACAGTTAAAGGTGCTTGAGCTGGAGCAATTTTAGGATGGGTAACCTTCCGGGAAGTGATTGTCGGAACCGTGTGGGTGAGGAAAAAATATCATGTTGTGATTTGTAGGGTCGGTAACAAGTCTTTAAACCTTCCGGACGTAGCGGACCGGCCGTCAGACATGGGTGGGCCCACAGACCGAGAGAGGACGTGGAGTCCATTAAAAAAAATGACGGTCGGGACGTTACA