ID Class Order Superfamily Length Start End Strand View
FJVB01000027.1_LTR-Cassandra_61 RetrotransposonsLTRLTR-Cassandra353711469711821-
FJVB01000027.1_LTR-Cassandra_62 RetrotransposonsLTRLTR-Cassandra274875119875392+
FJVB01000027.1_LTR-Cassandra_63 RetrotransposonsLTRLTR-Cassandra359977319977677+
FJVB01000027.1_LTR-Cassandra_64 RetrotransposonsLTRLTR-Cassandra152992807992958+
FJVB01000030.1_LTR-Cassandra_65 RetrotransposonsLTRLTR-Cassandra3571837918735+
FJVB01000030.1_LTR-Cassandra_66 RetrotransposonsLTRLTR-Cassandra362844676845037-
FJVB01000030.1_LTR-Cassandra_67 RetrotransposonsLTRLTR-Cassandra112845038845149-
FJVB01000030.1_LTR-Cassandra_68 RetrotransposonsLTRLTR-Cassandra357845150845506-
FJVB01000032.1_LTR-Cassandra_69 RetrotransposonsLTRLTR-Cassandra318201677201994-
FJVB01000032.1_LTR-Cassandra_70 RetrotransposonsLTRLTR-Cassandra118202039202156-
FJVB01000032.1_LTR-Cassandra_71 RetrotransposonsLTRLTR-Cassandra101203330203430-
FJVB01000032.1_LTR-Cassandra_72 RetrotransposonsLTRLTR-Cassandra344203464203807-
FJVB01000032.1_LTR-Cassandra_73 RetrotransposonsLTRLTR-Cassandra358972109972466+
FJVB01000033.1_LTR-Cassandra_74 RetrotransposonsLTRLTR-Cassandra357109349109705+
FJVB01000033.1_LTR-Cassandra_75 RetrotransposonsLTRLTR-Cassandra112109706109817+
FJVB01000033.1_LTR-Cassandra_76 RetrotransposonsLTRLTR-Cassandra355109820110174+
FJVB01000033.1_LTR-Cassandra_77 RetrotransposonsLTRLTR-Cassandra357758882759238+
FJVB01000034.1_LTR-Cassandra_78 RetrotransposonsLTRLTR-Cassandra338701783702120+
FJVB01000034.1_LTR-Cassandra_79 RetrotransposonsLTRLTR-Cassandra112702121702232+
FJVB01000034.1_LTR-Cassandra_80 RetrotransposonsLTRLTR-Cassandra365702233702597+

< 4 5 6 7 8 > Total 42


Arabidopsis halleri (v2.2)

ID:

FJVB01000027.1_LTR-Cassandra_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

353

Start:

711469  

End:

711821

Strand:

-

>FJVB01000027.1_LTR-Cassandra_61

TGTAACGCCCCGACCGTCCCTACCAGTGGGCCCCATGTCCTCTCTCGAGCCCATGGGCCCACCTCTGTCCGACGGTCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATTACCACATGATCTTTCCCTGTGTTTTGTTCTCACTCAGTTCCGACAATCACTTCCCGGAAGGTCACCTATCCTGAAACTACTTCAGCCTAAGCACGCTTAACTGTGGAGTTCTCTTAGGATGGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTCATGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000027.1_LTR-Cassandra_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

274

Start:

875119  

End:

875392

Strand:

+

>FJVB01000027.1_LTR-Cassandra_62

CATTAATTTTTCCTGTCAAACATTGCGGGAAAACTTTAAAACTAAACGTGTTTGAAGTTGATCAATTTTTAATGATAAATGATCTACTAGAAAGTAATTTTCGGTACTGTATGAATAAAAACAAAATATAAAAAAAATTCACGTGAACATTTCTATAACTAGTAAACAAGTCTTTGAAATCTCCGAAAATAACCAACCGGTCATCAAACGAAGATAAACCCACAGACCAAAAGAGAGCGTAGAGTCCACGAACGGTGGCAGTTGGGACATTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000027.1_LTR-Cassandra_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

977319  

End:

977677

Strand:

+

>FJVB01000027.1_LTR-Cassandra_63

TGTAACATCCCGGTTTCAGGAATATGGTGGTTCATGCGGAGATGTTTAAAAGAATTAATTTAGCCATATATGTCACCAAAATACAATTATCTTTTCGGTCAAACGTTCTGAGAGAACTCTACAGTTAAGCTTGTTTGAGCTTGAACAATTTCCGGATGGGTGACATTCCGGGAAGTGATTGTGGGAACTGTGTGAGTGAGGACAAAACTCAGAGAAATATTATGTGGTGATTTACAGGGTCGGTCAAGAAGTCTTTAAAGCCTCCCAGACGTAACAGATCAACCGTCAGATAGAAGTAGGACCCACATGTCCAAGAGAAGATGTGGGTGCTCACTGGTAGAGACGGTCAGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000027.1_LTR-Cassandra_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

152

Start:

992807  

End:

992958

Strand:

+

>FJVB01000027.1_LTR-Cassandra_64

ACCCTGGTTTGTGGAACATTAATACATTATGGTGGATGAAGAGAGTTTATGAAATTTTATTGACTACCTATATCATCAAAATACACAATATTTTTATGTAAGTCATTATAAGAGAACTCAACATTAAATATTTTTCAGTTGGAATGATTTTA

Arabidopsis halleri (v2.2)

ID:

FJVB01000030.1_LTR-Cassandra_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

18379  

End:

18735

Strand:

+

>FJVB01000030.1_LTR-Cassandra_65

TATAACACCCCGGTTTAAGGAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAAACATTCTGAGAGAACTCCACAGTTAAGCGTACTTGGGCTGGAGTAGTTTCAGGATRGRTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCCGGACGTAGCGGACCGGCCGTCGGACAAGGGTGGGCCCATGGGCCCGAGAGAGGACGTGGGGCTCACTGGTAGGGACGGTCGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000030.1_LTR-Cassandra_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

362

Start:

844676  

End:

845037

Strand:

-

>FJVB01000030.1_LTR-Cassandra_66

TGTAACGCCCCGACTGTCCCTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCATGGGCCCACCCCTGTCCTACGGCCGGTCCGCTAYGTCCGGAAGGCTTTAAAGACTTCTTTACCGACCCTACAATACAAATCACCACATGATCTTTCTCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAATTGCTCCAGCTCAAGCACCCTTAACTGTGRAGTTCTCTCAGGACCGTTRACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTCTCTTAAACCTCTCCGCATGCACCACTATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000030.1_LTR-Cassandra_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

845038  

End:

845149

Strand:

-

>FJVB01000030.1_LTR-Cassandra_67

ATTCACCCCTACTAACAGATCGCAAGGTCCTCGTTGCGGACCAAGACCGTCACCCCCGACGGTGTGAGCCCTCTTGACCCTACACTCAYCTGGGTTCGGCTCTGATACCACT

Arabidopsis halleri (v2.2)

ID:

FJVB01000030.1_LTR-Cassandra_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

845150  

End:

845506

Strand:

-

>FJVB01000030.1_LTR-Cassandra_68

TGTAACGCTCCGACCGTCCCTACCAGTGGGCCCCACGTCCTCTTTCGGGCCCATGGGCCCWCCCCTGTCCGGCGGCCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTTTTTACTGACCCTACAAATCACCACATGATCTTTCCCTATGTTTTGTTCTCACTCAAACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAATTGCTCTAGCTCAAGCACTCTTAACTGTGGAGTTCTCTCAGGACCGTTGACCAAAAAGATAAGTGCACTTTGGTGAAATAGGTGGCCAAATCAATTCTCTTAAACCTCTYMGCATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000032.1_LTR-Cassandra_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

201677  

End:

201994

Strand:

-

>FJVB01000032.1_LTR-Cassandra_69

TGTAACGCCCCGACCGTCCCTACCAGTGGGCCCCACGTCCTCTCTTGGGCCCATGGGCCCACCCCTGTCCGACGGCCGATCCGCTACGTCCGAGAGGCTTTAAAGATTTGTTTACCGACCCTACAAATCACCACATGATATTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGATCACCCATCCTGAAACTACTTCAGCCCAAGCACGCTTAACTGTAAAGTTCTCTCAGAACAGTTGACCGAAATGATAAGTGCACTTTAGTGACATAGGTGGCTAAATCAATTATTTTAAAACTCT

Arabidopsis halleri (v2.2)

ID:

FJVB01000032.1_LTR-Cassandra_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

118

Start:

202039  

End:

202156

Strand:

-

>FJVB01000032.1_LTR-Cassandra_70

AATTATTTTAAAACTCTTGACCGAAAAGATAAGTGCACTTTAGTGACATAGGTGGCTAAATCAATTATTTTAAAACTCTCCGCATGCACCACCATATTCCTAAAACCGGGGTATTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000032.1_LTR-Cassandra_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

101

Start:

203330  

End:

203430

Strand:

-

>FJVB01000032.1_LTR-Cassandra_71

TATAACGTCCGGACCGTCACACATCTCTTAATGGGTCCCACGTCTTCTCTCGGGTCTATGGGCCCATCCGTGTCCGACGGTCGGTCCGTTACGTCCAGAAG

Arabidopsis halleri (v2.2)

ID:

FJVB01000032.1_LTR-Cassandra_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

344

Start:

203464  

End:

203807

Strand:

-

>FJVB01000032.1_LTR-Cassandra_72

GACAGTCTCTTAATGGGTCCCACGTCTTCTCTCGGGTCTATGGGCCCATCCGTGTCCGACGGTCGGTCCGTTACGTCCAGAAGGCTTTAAAGACTTGTTTACCGATCCTACAAATCACCACATGATCTTTTCATGTGTTTTGTCTTCACTCACACAGTTCCAACAATCACTTCCCGGAAGATCAACCATCCTGAAACTATTCCAGCCCAAGCACGCTTAACTGTGGAGTTCTCTCAGGACGGTTGACCGAAAAGATAAGTGCACTTTAGTGACATAGGTGGCCAAATCAATTCTTTTAAACTTCTCTGTATGCACCACCATATTCCTGAAACCGGGATGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000032.1_LTR-Cassandra_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

358

Start:

972109  

End:

972466

Strand:

+

>FJVB01000032.1_LTR-Cassandra_73

TGTAACACCTCGGTTTCAGGAATATGGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGTCACCTATGTCACCAAAATGCACTTATCATTTCGGTCAACTGTCCTGAGAGAACTCCACAGTTAAGCATGCTTGAGCTGGAGTAGTTTCAGGATGGGTGACCTTCCGAGAAGTGATTGTCGGAACTGTGTGAGTGAGGACAAAACACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTTCCGGACGTAGCGGACCGGCCGTCAGACAGGGGTGGGCCCATGGGCTTGAGAGAGAACATGGGGGCCCACTGGTAGGGACGGTCGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000033.1_LTR-Cassandra_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

109349  

End:

109705

Strand:

+

>FJVB01000033.1_LTR-Cassandra_74

TGTAACACCCCGGTTTCAGGAATATGGTGGTGCATGCKGAGAGGTTTAAGAGAATTGATTTGGCCACCTATTTCACCAAAGTGCACTTATTTTTTTGGTCAACGGTCCTGAGAGAACTCCACAGTTAAGGGTGCTTGAACTGGAGCAATTTCAGGATGGGTGACCTTCCGAGAAGTGATTGTCGGAACTGTGTGAGTGAAGACAAAACACAGGGACAGATCATGTGGCGATTTGTAGGATCAGTAAACAAGTCTTTAAAGCAACCCGGACATAGCGGACCGGCCGCCGGACAGGAGTGGGCCCATGGGCCCGAAAGAAGATGTGGGGCCCACTGGTAGGGACGGTCAGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000033.1_LTR-Cassandra_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

109706  

End:

109817

Strand:

+

>FJVB01000033.1_LTR-Cassandra_75

AGTGGTATCAGAGCCGAACCCAGGCGAGTGTAGGGTGAAGAAGGCTCACACCATCGGGGGTGACGGTCTTGGTGCGCAACGAGGACATTGCGATCTGTTAGTGGGGTTAAAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000033.1_LTR-Cassandra_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

109820  

End:

110174

Strand:

+

>FJVB01000033.1_LTR-Cassandra_76

TAACACCCCGGTTTCCGGAATATGGTGGTGCATGCGGAGAGGTTTAAGAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACGGTCCTGAGAGAACTCCACAGTTAAGGGTGCTTGAGCTGGAGCAATTTTAGGATGGGTGACCTTCAGGGAAGTGAATGTCGGAACTGTGTGAGTAAGGACAAAACACTGGGAAAAATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTTTTTAAAGTCTTCCGGACGTAGCGGACTGGCCGTCGGACAGGGGTGTGCCCATGGGCCCGAGAGAGGATGTGGGGCCCACTGGTAGGGACGGTCGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000033.1_LTR-Cassandra_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

758882  

End:

759238

Strand:

+

>FJVB01000033.1_LTR-Cassandra_77

TGTAACATCCCGGTTTCAGGAATATAGTGATGCATGCAGAGAGGATTAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCATTTATCTTTTCGGTCAACTGTCCTGGGAGAACTCCACAGTTAAGCGTGTTTGAACTGGGAAAATTTCAAGATGGGTGACCTTCTGGGAAGTGATTGTCGGAACTGTGTGAGTGAAAACAAAATACAGGGAAAGATCGTGTGATGATTTTTAGGGTTGGTAAATAAATCTTTAAAGCCTCCCAGACGTAGCGGACCGGTCATCGAACAGAAGTAGGGCACACAGATCCGAGAGAAAACGTGGATGCTCACTGGTAGGGACGGTCGGAACGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000034.1_LTR-Cassandra_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

338

Start:

701783  

End:

702120

Strand:

+

>FJVB01000034.1_LTR-Cassandra_78

TGTAACATCACGGTTTCAGAAATATGGTGGTGCATACGAAGAGATTTAAAAGAATTGATTTAGCCACCAAAGTGCACATATCTTTTCGGTCAACTGTCCTGAGAAAACTCCACAATTAAGCGTGCTTAAGCTGGAAAAATTTCAGGATGGGTGACCTTCCGGGAAGCGGTTGTTGGAACTGTGTGAGTGAGGACAAAGCCCAGGAAAATATCATGTGGTGATTTTTAGGATCGGTATTCGGTAAACAAGTCTTTAAAGCCTCCCGGACGTAGCGGACCAACCGTCAGAAGATGATGGATGTGGGACCCATTAAGAAAGATGGCAGTCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000034.1_LTR-Cassandra_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

702121  

End:

702232

Strand:

+

>FJVB01000034.1_LTR-Cassandra_79

AGTGATTTCAACGCTGAATCCATATGAGTGTGGAGTAAAGAGAACTCACACCGCCGGGGGTGACGGTCTTCGTGCGCAACGAGGACGTTGCGATCTGTTAGGGGGGTTAAAT

Arabidopsis halleri (v2.2)

ID:

FJVB01000034.1_LTR-Cassandra_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

365

Start:

702233  

End:

702597

Strand:

+

>FJVB01000034.1_LTR-Cassandra_80

TATAACACCCCGGGTTAAGGGATATGGTGGTGCATGCGGAGAGGTTTAAAATAATTGATTTGGCTACCTATGTCATCAAAGTGTACTTATCTTTTCGGTCAACTGTTCTAAGAAAACTCCACAGTTAAGCGTGCTTAAGCTAGGAAATTTTCAGGATGGGTGACCTTCCGAGAAGTGATTGTCGGAACTGTGTGTGTGAGTGAGGACAAAACACAGGGAAGGATTATGTGGTGATTTTTGTTGAATCGGTAAATAAGTCTTTAAAGTTTCCCGGACGTAATGGACCGACCGTCAAAAAATGGTGAGTCCACGGGCAGAGAGTAGATGTTGGACCTATTAAGAGAGATGACGGTCGGGACGTTACA