ID Class Order Superfamily Length Start End Strand View
FJVB01000683.1_LTR-Cassandra_821 RetrotransposonsLTRLTR-Cassandra2231230212524+
FJVB01000683.1_LTR-Cassandra_822 RetrotransposonsLTRLTR-Cassandra3591348013838-
FJVB01000694.1_LTR-Cassandra_823 RetrotransposonsLTRLTR-Cassandra28589569240-
FJVB01000717.1_LTR-Cassandra_824 RetrotransposonsLTRLTR-Cassandra276250525-
FJVB01000723.1_LTR-Cassandra_825 RetrotransposonsLTRLTR-Cassandra36180898449-
FJVB01000728.1_LTR-Cassandra_826 RetrotransposonsLTRLTR-Cassandra35731323488-
FJVB01000740.1_LTR-Cassandra_827 RetrotransposonsLTRLTR-Cassandra32659076232+
FJVB01000761.1_LTR-Cassandra_828 RetrotransposonsLTRLTR-Cassandra35749155271-
FJVB01000952.1_LTR-Cassandra_829 RetrotransposonsLTRLTR-Cassandra20853525559-
FJVB01001039.1_LTR-Cassandra_830 RetrotransposonsLTRLTR-Cassandra36237514112-
FJVB01001118.1_LTR-Cassandra_831 RetrotransposonsLTRLTR-Cassandra25724352691+
FJVB01001118.1_LTR-Cassandra_832 RetrotransposonsLTRLTR-Cassandra15938914049+
FJVB01001243.1_LTR-Cassandra_833 RetrotransposonsLTRLTR-Cassandra3657001064+
FJVB01001253.1_LTR-Cassandra_834 RetrotransposonsLTRLTR-Cassandra357280636-
FJVB01001466.1_LTR-Cassandra_835 RetrotransposonsLTRLTR-Cassandra348428775+
FJVB01001472.1_LTR-Cassandra_836 RetrotransposonsLTRLTR-Cassandra325338662-
FJVB01001656.1_LTR-Cassandra_837 RetrotransposonsLTRLTR-Cassandra301121421+
FJVB01001812.1_LTR-Cassandra_838 RetrotransposonsLTRLTR-Cassandra31810071324+
FJVB01001812.1_LTR-Cassandra_839 RetrotransposonsLTRLTR-Cassandra11213251436+
FJVB01001812.1_LTR-Cassandra_840 RetrotransposonsLTRLTR-Cassandra13914371575+

< 38 39 40 41 42 > Total 42


Arabidopsis halleri (v2.2)

ID:

FJVB01000683.1_LTR-Cassandra_821

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

223

Start:

12302  

End:

12524

Strand:

+

>FJVB01000683.1_LTR-Cassandra_821

TGTAACACCCTGATTTCATGAAGTATGGTGGTGCATGAGGAGAGTTTAAAGAAATCATTTGGCCACCTATATCATCAAAGTACACTTATCTTTTCGATCAAACATCTCAAGAGAACTTCATAGTTAACGTATTTGAGCTAGGGAAATTTCAGGATGGATGACCTACGGGAATGTGATTATCGGTACTGTGTGAGTAAGGAAAAAACATGGGGAAAGATAACGT

Arabidopsis halleri (v2.2)

ID:

FJVB01000683.1_LTR-Cassandra_822

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

13480  

End:

13838

Strand:

-

>FJVB01000683.1_LTR-Cassandra_822

TGTAACGCCCTGACCGCCATCTTTGTTAATGGACTCCATGTCCTCTCTCGGCCGATGGGCCCACTCTTATTTGACGGCCGGTTTGCTACGTTTGGGAGGCTTTAAAGACTTGTATACCGACCCTACAAATACCTACATAATATTTCTCCTTGTTTTATCCTCACTCACACGGTTCCGACAATCAGTTCCCGGAAGGTCACCCATCCTGAAATTACTCCAGCTCAAGCTCGCTTAACTGTGGAGTTCTCTAAGGATATTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGTCAAATCGATTTTTTTAAACCTCTCCGCATGCACCACCATATTTTTTAAATCGGAGTATTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000694.1_LTR-Cassandra_823

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

285

Start:

8956  

End:

9240

Strand:

-

>FJVB01000694.1_LTR-Cassandra_823

CCTCTCTTAATGGGTCCACGTCCTCTCTCGGCCGGTCCGCTACATTCAAGAGGCTTTAAAGACTTGTTTACCGTTCCTACAAATCACCACATGATCTTTTCTTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCTAGAAGGTCACCCATCCTGAAATTGCACGCTTAACTGTGGAGTTCTCTCAGGGCAGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGTCAAATCAACTCTTTTAACACCACATTCTTGAAACCAGAGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000717.1_LTR-Cassandra_824

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

276

Start:

250  

End:

525

Strand:

-

>FJVB01000717.1_LTR-Cassandra_824

CACCTGTGTCCGACGGTCGGAGGTTTTGAAGACTTGTTCACCGACCCTACAAATCACCATATGATATTTTCCTATATTTTGTCCTTACTCGCACCGTACCGACATTTTTGGTAGTTCATCCATCTTAAAATTGATCAAACCCAAATACGTTAAACCGTAAATTCTCTGAGAATGTTTGACCGAAAAATAAGTGCTCTTTTGTGATATATATGGTCAAATCAATTAATTTAAACTATTTCGCATGCACCACCATATTTTTGAAACTGGGATGCTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000723.1_LTR-Cassandra_825

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

361

Start:

8089  

End:

8449

Strand:

-

>FJVB01000723.1_LTR-Cassandra_825

TGTAACGCCCCGACCTTCACACATCTCTTAATGGGTCCCGCGTCCTCTCTCAGCCCATGGGCCAACCCGTGTCCGACGGTGGGTCCGCTATGTCCGGGAGGCTTTAAAGACTTGTTTACAGACCCTACAAATCACCATATGATTTTTTCACGTGTTTTGTCCTCACTCACACAGTTCTGACAATCACTTCCCGGAAGGTCACACATCCTGAAATTGCTCCAGCTCAAGCACGTTTAACTGTGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATTAATTCTTTTAAACCTCTCCGCATGCACTACCATATTCCTGAAATCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000728.1_LTR-Cassandra_826

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

3132  

End:

3488

Strand:

-

>FJVB01000728.1_LTR-Cassandra_826

TGTAACGCCCCGACCGTTCCTACCAGTGGGCTCCACATCCTCTCTTGGGCCCATGGGCCCACCCTTGTCCAACGGTCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACTATATGATCTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAACTACTCCAGCCCAAGCACGCTTAACTGTGGAGTTCTGTCAGGACGATTGACCGAAAAGATAAGTGCATTTTGGTGACATAGGTAGCCAAATCAATTCTTTTAAACCTTTCCGCATGCACCACCACATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000740.1_LTR-Cassandra_827

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

326

Start:

5907  

End:

6232

Strand:

+

>FJVB01000740.1_LTR-Cassandra_827

TGTAACACCCCAGTTTTAAGAATATGGTAGTGCATGCGGAGAGGTTCAAAAGAATTGATTTGGCCACTTATGTCACCAAAGTACACTTATCTTTTTGGTCAAACGTCCTGAGAAAACTCCATAATTAAGCGTGCTTGAGCTGAAGCAATTTCAGGATGGATGACCTTCCGAGATGTGAATGTCAGAACCGTGCGAGTGAGGACAAAACACGGGAACAAATCATGTGGTAATTTGTATGGTCGGTAAACAAGTCTTTAAAGCCTCCCGGATGTAGCGGACCGACCGTCGGACAGGGGTGGGGCTACGAGCCCGAGAGAGAATGTAGG

Arabidopsis halleri (v2.2)

ID:

FJVB01000761.1_LTR-Cassandra_828

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

4915  

End:

5271

Strand:

-

>FJVB01000761.1_LTR-Cassandra_828

TGTAAAGCCCCGACCGTCCCTACCAGTGGGCCCCACATCCTCTCTTGGGCCCATGGGCCCACCCCTGTCCGACGGCCGATCCGCTACGTCTGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTTTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTGAAACTACTCCAGCCCAAGCACGCTTAACTGTGGAGTTCTCTCAGGACAGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGCCAAATCAACTATTTTAAACCTCTCCGCATACACCACCATATTCCTGAAACCAGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01000952.1_LTR-Cassandra_829

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

208

Start:

5352  

End:

5559

Strand:

-

>FJVB01000952.1_LTR-Cassandra_829

TGTAACGCCCTGATCGTCCCTACCAGTGGGCCCCACGTCTTCTCTCGGGCCCATGGGTCCACCCCTGTCTAACGGCCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGATTACCGACCTTACAAATCACCACATGATTTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTCAA

Arabidopsis halleri (v2.2)

ID:

FJVB01001039.1_LTR-Cassandra_830

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

362

Start:

3751  

End:

4112

Strand:

-

>FJVB01001039.1_LTR-Cassandra_830

TGTAACGTCCCGACCGCCACACCTGTCTTAATGGGCCCCACGTCCTCTCTCGGACCCATGGGCCCACCCGTGTCTGACGGTCGGTTTGCTATGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACAAGATCTCTCTATGTGTTTTGTCCTCACGCACACAGTTCCGACAATCACTTTCTGGAAGGTCACCCATCTTGAAATTATTGCAGCTCAAGCATGCTTAACTGTGGAGTTCTCTCAGGACAATTGACCGAAAAGATAAGTTCACTTTGGTGACATATGTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01001118.1_LTR-Cassandra_831

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

257

Start:

2435  

End:

2691

Strand:

+

>FJVB01001118.1_LTR-Cassandra_831

TCCTGAGAGAACTCAAGGGTTAAACGTGCTTGTGCTCAAGCAATTTTAGGATGGGTGACCTTCCGGAAAGTGATTGTTGGAACTATTATTTGAGTGAGGACAAAACATAGGGAAAGATCATGTGGTGATTTGTAGGTTTGATAAACAAGTCTTTAAAGCCTCTCGGATGTTGCAGACCGACCATCAGTTAAGAGTGGAGCCCATGGACCCGACAGAGGACGTGAGTGCTAACTGGTGGGGATGGTCGGGGCGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01001118.1_LTR-Cassandra_832

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

159

Start:

3891  

End:

4049

Strand:

+

>FJVB01001118.1_LTR-Cassandra_832

GGAACTGTGTGAGTGAGGACCAAACACACAGAAAGATCATGTGGTAATTTGTAGGATCGGTAAACAAGTCTTTAAAGCCTCCCAGATGTTGCGGACCGACCGTCAGTTAGGATGGACCCGACGTGGGTGCTGACTTGTAGGAACGGTCAGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01001243.1_LTR-Cassandra_833

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

365

Start:

700  

End:

1064

Strand:

+

>FJVB01001243.1_LTR-Cassandra_833

TGTAACAGTACCCCGGTTTCAGAAATATGATGGTGCATGCGGAGAGTTTAAAAAAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAATTCACTGTCCTGAGAGAACTCCACAGTTAAGCGTGTTTGAGCTGGAGCAATTTCAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACTGTGTGAGTGAGGACAAAACACAGGGGATCATGTGGTGATTTGTAGGGTCGATAAACAAGTCTTTAAAGCCTCCCAGATGTAGCGAACCGACCGTTGGACACGGGTGGGCCCATAGGCCCGAGAGAGGACGTGGAACCCATTAAAAGAGGTGTGGCGGTCGAGACGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01001253.1_LTR-Cassandra_834

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

280  

End:

636

Strand:

-

>FJVB01001253.1_LTR-Cassandra_834

TGTAACGCCCCGACCATCCCTACCAGTGGGCCTCACGTCCTCTCTCGAGCCCATGGGCCCACCCCTGTCCGACGGCCGGTCCGCTACGTCCGGGAGGCTTTAAAGACTTGTTTACCGACCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGTCCTCACTCACACAGTTCCGACAATCACTTCCCGGAAGGTCACCCATCCTCAAACTACTCAAGCCCAAACACACTTAACTGTGGAGTTCTCTCAGGATGGTTGACCGAAAAGATAAGTGCACTTTGCTGACATAGGTGGCCAAATCAATTCTTTTAAACCTCTCCCCATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01001466.1_LTR-Cassandra_835

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

428  

End:

775

Strand:

+

>FJVB01001466.1_LTR-Cassandra_835

TGTAATACCCAGGTTTCAGGAATATAGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGTCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACTGTCATGAGAGAACTCCATAGTTAAGCGTGCTTAGGCTGGAGTAGTTTTCAGGATGGGTGACCTTCCAAGAAGTGATTGTCGGAACTGTGTGAGTGAAGACAAAACACAGGGAAATATCACGTGGTGATTTGAAGGGTCGGTAAACAAGTCTTTAAAGCCTCCCGGACGTAGCGGATCGACTGTCAGACAGGGGTGGACCCATGGGCCCGAGAGAGGACGTGGGACCCACTGGTAAGGACGGGCG

Arabidopsis halleri (v2.2)

ID:

FJVB01001472.1_LTR-Cassandra_836

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

325

Start:

338  

End:

662

Strand:

-

>FJVB01001472.1_LTR-Cassandra_836

TGTAACGTCCCGACCGCCATCTTTAAGGGCACCCATATCATCTCTCGGCCCATGAGTCCACCTATATACAACGGTCGGTCCACTACGTTCGGGAGTCTTTAAAGACTTGTTTACCGATTCTACAAATCACTCACACGATATCGACAATCACTTCTTGGAAGGTCACTCCTCCTGAAATTGCTCCAGCATAAGCACACTCAACTGTGAAGTTCTCTCATGACGTTTGACCGAAAAGATAAGTGCACTTTAGTGACAGGGGTGTCCAAATCAATTCTTTTAAACATCTCCGCATGCACCATCATATTACTAAAACCGGGGTGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01001656.1_LTR-Cassandra_837

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

301

Start:

121  

End:

421

Strand:

+

>FJVB01001656.1_LTR-Cassandra_837

TGTAACACCCTGGTTTCAAGAATGTGGTGGTGCATGCGAAGAGGTTTAAAAGAGTTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACTGCCATGAGAGAACTCCACAGTTAAGCGTGCAATTTCAGGATGGGTGACCTTCTGGGAAGTGATTGTCGGAACTGTGTGAGTGAGRACAAAACACAKGAAAAGATCATGTGATGATTTGTAGGAACGGTAAACAAGTCTTTAAAGTCTCCCGGACGTACCRGACCGGCCGAGAGAGGACGTGGACCCATTAAGAGAGG

Arabidopsis halleri (v2.2)

ID:

FJVB01001812.1_LTR-Cassandra_838

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

1007  

End:

1324

Strand:

+

>FJVB01001812.1_LTR-Cassandra_838

TGTAACACCCCGGTTTCAGGAATATGGTGGTGCATGCGGAGAGATTTAAAAGAATTGATTTGGCCACCTATGTCACTATAGTGCACTTATCTTTTTGGTCAACCGTCCTGAGAGAACTCCACAGTTAAGCGTGCTTGGGCTAGAGTAGTTTCAGGATGGGTGACCTTCACAGGGAAAGATCATGTGGTGATTTGTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCCGGACATAGCGGACCGTCTGTCGGACAGGGGTGGGCCCATGGGTCCGGGAGAGGATGTGGGGCCCACTGGTAGGGACGGTCGGGGCGGTTACA

Arabidopsis halleri (v2.2)

ID:

FJVB01001812.1_LTR-Cassandra_839

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

1325  

End:

1436

Strand:

+

>FJVB01001812.1_LTR-Cassandra_839

AGTGGTATCAGAGCCGAACCCAGACGAGTGTAGAGTCAAGAGGGCTCACACCGTAGGGGGTGACGGTCTTGGTGCGCAACGAGGACGTTGCGATCTGTTAGTGGGGGTGAAT

Arabidopsis halleri (v2.2)

ID:

FJVB01001812.1_LTR-Cassandra_840

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

139

Start:

1437  

End:

1575

Strand:

+

>FJVB01001812.1_LTR-Cassandra_840

TGTAATACCCCGGTTTCAGGAATATGGTGATGCATGCGGAGAGATTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACCGTCCTGAGAGAACTCCACAGTTAAGCGTGCTTGGG