| Number | Species | Genome_ID | Representative genome | File number | References | More | Download |
|---|---|---|---|---|---|---|---|
| 81 | Field_pennycress-v1.1 | Yes | 4 | Dorn et al. | |||
| 82 | Field_pennycress-YUNv1.0 | NO | 1 | Geng et al. | |||
| 83 | Field_pennycress-v1.0 | NO | 4 | Hu et al. | |||
| 84 | Field_pennycress-v2.0 | NO | 4 | Nunn et al. | |||
| 85 | Brassica rapa pangenome |
B.rapa_pangenome-v1.0 | NO | 4 | Cai et al. |
Thlaspi arvense
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 81 | Thlaspi arvense | Brassicaceae | Thlaspi | T. arvense | Field pennycress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.1 | 4 | y | Field_pennycress-v1.1 | 2015.04 | DNA Research |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 539 | 412.25 | 27,390 | 7 | 140.82 | Illumina; PacBio |
| References | Reference_title |
|---|---|
| Dorn et al. | A draft genome of field pennycress (Thlaspi arvense) provides tools for the domestication of a new winter biofuel crop |
| Database_name | BRAD (Brassica Database) |
|---|
Thlaspi arvense
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 82 | Thlaspi arvense | Brassicaceae | Thlaspi | T. arvense | Field pennycress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 1 | None | Field_pennycress-YUNv1.0 | 2021.07 | BMC Biology |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 548.21 | 527.15 | 31596 | 7 | 72499.2 | Illumina;Oxford Nanopore |
| References | Reference_title |
|---|---|
| Geng et al. | Genomic analysis of field pennycress (Thlaspi arvense) provides insights into mechanisms of adaptation to high elevation |
| Database_name | NCBI |
|---|
Thlaspi arvense
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 83 | Thlaspi arvense | Brassicaceae | Thlaspi | T. arvense | Field pennycress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | None | Field_pennycress-v1.0 | 2022.01 | Frontiers in Plant Science |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 487.2 | 486.27 | 36556 | 7 | 60518.4 | Illumina;Bionano;PacBio |
| References | Reference_title |
|---|---|
| Hu et al. | Rapid Genome Evolution and Adaptation of Thlaspi arvense Mediated by Recurrent RNA-Based and Tandem Gene Duplications |
| Database_name | Plant Genome Evolution |
|---|
Thlaspi arvense
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 84 | Thlaspi arvense | Brassicaceae | Thlaspi | T. arvense | Field pennycress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v2.0 | 4 | None | Field_pennycress-v2.0 | 2022.01 | Plant Biotechnology Journal |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| NA | 526 | 27128 | 7 | 66457.6 | PacBio |
| References | Reference_title |
|---|---|
| Nunn et al. | Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates |
| Database_name | NCBI |
|---|
Brassica rapa pangenome
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 85 | Brassica rapa pangenome | Brassicaceae | Brassica | None | Brassica rapa pangenome |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | None | B.rapa_pangenome-v1.0 | 2021.05 | Genome Biology |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| None | None | None | None | None | Illumina; PacBio; |
| References | Reference_title |
|---|---|
| Cai et al. | Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa |
| Database_name | BRAD (Brassica Database) |
|---|
Brassica rapa pangenome
| Genome | Gff | Protein | CDS |
|---|---|---|---|
| NONE | NONE | NONE | NONE |