| Number | Species | Genome_ID | Representative genome | File number | References | More | Download |
|---|---|---|---|---|---|---|---|
| 61 | Pakchoi-ZYCX-v1.0 | NO | 4 | Li et al. | |||
| 62 | Pakchoi-PC-fu-v1.0 | NO | 4 | Xu et al. | |||
| 63 | Pakchoi-XQC-v1.0 | NO | 4 | Liu et al. | |||
| 64 | Camelina-v2.0 | Yes | 4 | Kagale et al. | |||
| 65 | Capsella-v1.1 | Yes | 4 | Slotte et al. | |||
| 66 | Red_shepherd's_purse-v1.1 | Yes | 4 | Slotte et al. | |||
| 67 | Hairy_bittercress-v1.0 | Yes | 4 | Gan et al. | |||
| 68 | Salt_cress-v1.1 | Yes | 4 | Yang et al. | |||
| 69 | Salt_cress-v1.0 | NO | 0 | Wu et al. | |||
| 70 | H.variabilis-v1.0 | NO | 4 | Cheng et al. | |||
| 71 | Woad-v1.0 | Yes | 4 | Kang et al. | |||
| 72 | Alabama_gladecress-v1.0 | Yes | 4 | Haudry et al. | |||
| 73 | Peruvian_ginseng-v1.0 | Yes | 4 | Zhang et al. | |||
| 74 | Microthlaspi_erraticum-v1.0 | Yes | 4 | Mishra et al. | |||
| 75 | Radish-v1.1 | NO | 4 | Kitashiba et al. | |||
| 76 | Radish-v1.0 | Yes | 4 | Jeong et al. | |||
| 77 | Saltwater_cresses-v1.0 | Yes | 4 | Dassanayake et al. | |||
| 78 | London_rocket-v1.0 | Yes | 4 | Haudry et al. | |||
| 79 | Field_pennycress-v1.0 | NO | 3 | Dorn et al. | |||
| 80 | Field_pennycress-v1.1 | Yes | 4 | Dorn et al. |
Brassica rapa ssp.chinensis-AA
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 61 | Brassica rapa ssp.chinensis-AA | Brassicaceae | Brassica | B. rapa var. pakchoi.ZYCX | Chinese cabbage |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | None | Pakchoi-ZYCX-v1.0 | 2020.12 | Plant Biotechnology Journal |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 406 | 370.10 | 45,363 | 10 | 38,300.00 | PacBio; Illumina; Hi-C |
| References | Reference_title |
|---|---|
| Li et al. | Assembly of the non-heading pak choi genome and comparison with the genomes of heading Chinese cabbage and the oilseed yellow sarson |
| Database_name | BRAD (Brassica Database) |
|---|
Brassica rapa ssp.chinensis-AA
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 62 | Brassica rapa ssp.chinensis-AA | Brassicaceae | Brassica | B. rapa var. pakchoi.PC-fu | Chinese cabbage |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | None | Pakchoi-PC-fu-v1.0 | 2022.05 | Horticulture Research |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 514.25 | 411.40 | 52,511 | 10 | 39,600.00 | Nanopore; Illumina; Hi-C |
| References | Reference_title |
|---|---|
| Xu et al. | The reference genome and full-length transcriptome of pakchoi provide insights into cuticle formation and heat adaption |
| Database_name | Figshare |
|---|
Brassica rapa ssp.chinensis-AA
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 63 | Brassica rapa ssp.chinensis-AA | Brassicaceae | Brassica | B. rapa var. pakchoi.XQC | Chinese cabbage |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | None | Pakchoi-XQC-v1.0 | 2023.09 | Horticulture Research |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 457.87 | 466.11 | 47,570 | 10 | 46,203.07 | PacBio; Illumina; Hi-C; Hi-C |
| References | Reference_title |
|---|---|
| Liu et al. | The high-quality sequencing of the Brassica rapa ‘XiangQingCai’ genome and exploration of genome evolution and genes related to volatile aroma |
| Database_name | TBGR |
|---|
Camelina sativa
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 64 | Camelina sativa | Brassicaceae | Camelina | C. sativa | Camelina |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v2.0 | 4 | y | Camelina-v2.0 | 2014.04 | Nature Communications |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 785 | 641.45 | 89,418 | 20 | 2,160.00 | 454; Illumina |
| References | Reference_title |
|---|---|
| Kagale et al. | The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure |
| Database_name | BRAD (Brassica Database) |
|---|
Capsella grandiflora
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 65 | Capsella grandiflora | Brassicaceae | Capsella | C. grandiflora | Capsella |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.1 | 4 | y | Capsella-v1.1 | 2013.07 | Nature Genetics |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| NA | 134.8 | 26,521 | 8 | 98.10 | Sanger; 454; Illumina |
| References | Reference_title |
|---|---|
| Slotte et al. | The Capsella rubella genome and the genomic consequences of rapid mating system evolution |
| Database_name | Phytozome |
|---|
Capsella rubella
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 66 | Capsella rubella | Brassicaceae | Capsella | C. rubella | Red shepherd's purse |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.1 | 4 | y | Red_shepherd's_purse-v1.1 | 2013.07 | Nature Genetics |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 219 | 135 | 26,521 | 8 | 15,100.00 | Sanger |
| References | Reference_title |
|---|---|
| Slotte et al. | The Capsella rubella genome and the genomic consequences of rapid mating system evolution |
| Database_name | Phytozome |
|---|
Cardamine hirsuta
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 67 | Cardamine hirsuta | Brassicaceae | Cardamine | C. hirsuta | Hairy bittercress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | Hairy_bittercress-v1.0 | 2016.10 | Nature Plants |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 225 | 198 | 29,458 | 8 | NA | Illumina |
| References | Reference_title |
|---|---|
| Gan et al. | The Cardamine hirsuta genome offers insight into the evolution of morphological diversity |
| Database_name | Cardamine hirsuta Genetic and genomic |
|---|
Eutrema salsugineum
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 68 | Eutrema salsugineum | Brassicaceae | Eutrema | E. salsugineum | Salt cress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.1 | 4 | y | Salt_cress-v1.1 | 2013.03 | Frontiers in Plant Science |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| NA | 243.1 | 26,531 | 7 | 8,000.00 | Sanger |
| References | Reference_title |
|---|---|
| Yang et al. | The Reference Genome of the Halophytic Plant Eutrema salsugineum |
| Database_name | Phytozome |
|---|
Eutrema salsugineum
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 69 | Eutrema salsugineum | Brassicaceae | Eutrema | E. salsugineum | Salt cress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 0 | None | Salt_cress-v1.0 | 2012.07 | PNAS |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 260 | 233.7 | 28,457 | 7 | 403.52 | Illumina |
| References | Reference_title |
|---|---|
| Wu et al. | Insights into salt tolerance from the genome of Thellungiella salsuginea |
| Database_name | NCBI |
|---|
Heliophila variabilis
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 70 | Heliophila variabilis | Brassicaceae | Heliophila | H.variabilis | None |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | None | H.variabilis-v1.0 | 2023.07 | The Plant Journal |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 334 | 300.50 | 32,351 | 11 | 35,16.00 | Illumina; PacBio; |
| References | Reference_title |
|---|---|
| Cheng et al. | The meso-octoploid Heliophila variabilis genome sheds a new light on the impact of polyploidization and diploidization on the diversity of the Cape flora |
| Database_name | bioinformaticslab |
|---|
Isatis indigotica
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 71 | Isatis indigotica | Brassicaceae | Isatis | I. indigotica | Woad |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | Woad-v1.0 | 2020.02 | Horticulture Research |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 305 | 293.88 | 30,323 | 7 | 36,165.60 | PacBio; Illumina; Hi-C |
| References | Reference_title |
|---|---|
| Kang et al. | A chromosome-scale genome assembly of Isatis indigotica, an important medicinal plant used in traditional Chinese medicine: An Isatis genome |
| Database_name | BRAD (Brassica Database) |
|---|
Leavenworthia alabamica
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 72 | Leavenworthia alabamica | Brassicaceae | Leavenworthia | L. alabamica | Alabama gladecress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | Alabama_gladecress-v1.0 | 2013.06 | Nature Genetics |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 316 | 174 | 30,343 | NA | 70.00 | Illumina |
| References | Reference_title |
|---|---|
| Haudry et al. | An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions |
| Database_name | BRAD (Brassica Database) |
|---|
Lepidium meyenii
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 73 | Lepidium meyenii | Brassicaceae | Lepidium | L. meyenii | Peruvian ginseng |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | Peruvian_ginseng-v1.0 | 2016.05 | Molecular Plant |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 751 | 743 | 96,417 | 32 | 2,421.00 | Illumina |
| References | Reference_title |
|---|---|
| Zhang et al. | Genome of Plant Maca (Lepidium meyenii) Illuminates Genomic Basis for High-Altitude Adaptation in the Central Andes |
| Database_name | NCBI |
|---|
Microthlaspi erraticum
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 74 | Microthlaspi erraticum | Brassicaceae | Microthlaspi | M. erraticum | Microthlaspi erraticum |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | Microthlaspi_erraticum-v1.0 | 2020.07 | Front. Plant Sci |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 211 | 170.42 | 51,309 | 7 | NA | Illumina; PacBio |
| References | Reference_title |
|---|---|
| Mishra et al. | The Genome of Microthlaspi erraticum (Brassicaceae) Provides Insights Into the Adaptation to Highly Calcareous Soils |
| Database_name | NCBI |
|---|
Raphanus sativus
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 75 | Raphanus sativus | Brassicaceae | Raphanus | R. sativus var. Aokubi | Radish |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.1 | 4 | None | Radish-v1.1 | 2014.05 | DNA Research |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 402 | 305 | 61,572 | 9 | 46.00 | Illumina |
| References | Reference_title |
|---|---|
| Kitashiba et al. | Draft sequences of the radish (Raphanus sativus L.) genome |
| Database_name | BRAD (Brassica Database) |
|---|
Raphanus sativus
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 76 | Raphanus sativus | Brassicaceae | Raphanus | R. sativus var. WK10039 | Radish |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | Radish-v1.0 | 2016.04 | Theoretical and Applied Genetics |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 553 | 426.2 | 46,514 | 9 | 1,220.00 | Illumina; PacBio; Sanger; 454 |
| References | Reference_title |
|---|---|
| Jeong et al. | Elucidating the triplicated ancestral genome structure of radish based on chromosome-level comparison with the Brassica genomes |
| Database_name | RadishGD (Radish Genome Database) |
|---|
Schrenkiella parvula
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 77 | Schrenkiella parvula | Brassicaceae | Schrenkiella | S. parvula | Saltwater cresses |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | Saltwater_cresses-v1.0 | 2011.08 | Nature Genetics |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 140 | 137 | 30,419 | 7 | 5,290.00 | 454;Illumina |
| References | Reference_title |
|---|---|
| Dassanayake et al. | The genome of the extremophile crucifer Thellungiella parvula |
| Database_name | BRAD (Brassica Database) |
|---|
Sisymbrium irio
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 78 | Sisymbrium irio | Brassicaceae | Sisymbrium | S. irio | London rocket |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 4 | y | London_rocket-v1.0 | 2013.06 | Nature Genetics |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 262 | 259 | 28,917 | NA | 135.00 | Illumina |
| References | Reference_title |
|---|---|
| Haudry et al. | An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions |
| Database_name | BRAD (Brassica Database) |
|---|
Thlaspi arvense
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 79 | Thlaspi arvense | Brassicaceae | Thlaspi | T. arvense | Field pennycress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.0 | 3 | None | Field_pennycress-v1.0 | 2015.04 | DNA Research |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 539 | 412.25 | 27,390 | 7 | 140.82 | Illumina; PacBio |
| References | Reference_title |
|---|---|
| Dorn et al. | A draft genome of field pennycress (Thlaspi arvense) provides tools for the domestication of a new winter biofuel crop |
| Database_name | Pennycress Genomics |
|---|
Thlaspi arvense
| Number | Species | Family | Genus | Cultivar | Common_name |
|---|---|---|---|---|---|
| 80 | Thlaspi arvense | Brassicaceae | Thlaspi | T. arvense | Field pennycress |
| Version | File_number | Aanlyze | Genome ID | Year | Journal |
|---|---|---|---|---|---|
| v1.1 | 4 | y | Field_pennycress-v1.1 | 2015.04 | DNA Research |
| Estimated Size (Mb) | Assembled (Mb) | Gene (#) | Chr(#) | Scaffold N50 (Kb) | Sequencer Types |
|---|---|---|---|---|---|
| 539 | 412.25 | 27,390 | 7 | 140.82 | Illumina; PacBio |
| References | Reference_title |
|---|---|
| Dorn et al. | A draft genome of field pennycress (Thlaspi arvense) provides tools for the domestication of a new winter biofuel crop |
| Database_name | BRAD (Brassica Database) |
|---|
Eutrema salsugineum
| Genome | Gff | Protein | CDS |
|---|---|---|---|
| NONE | NONE | NONE | NONE |