Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
21 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. NY7 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v2.0 4 None Ningyou7-v2.0 2019.04 Plant Biotechnology Journal

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1170 994 104,179 19 6,900.00 PacBio; Illumina; Hi-C

References Reference_title
Zou et al. Genome‐wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

Database_name BnPedigome

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
22 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Tapidor Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v2.0 1 None Tapidor-v2.0 2019.04 Plant Biotechnology Journal

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1335 1020 NA 19 806.00 PacBio; Illumina; Hi-C

References Reference_title
Zou et al. Genome‐wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

Database_name BnPedigome

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
23 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. SL-1 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v1.0 1 None SL-1-v1.0 2019.04 Plant Biotechnology Journal

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1175 861 NA 10 331.00 Illunima

References Reference_title
Zou et al. Genome‐wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

Database_name BnPedigome

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
24 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. NY1 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v1.0 1 None NY1-v1.0 2019.04 Plant Biotechnology Journal

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1221 846 NA 19 369.60 Illunima

References Reference_title
Zou et al. Genome‐wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

Database_name BnPedigome

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
25 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. CY2 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v1.0 1 None CY2-v1.0 2019.04 Plant Biotechnology Journal

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1178 870 NA 19 293.20 Illunima

References Reference_title
Zou et al. Genome‐wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

Database_name BnPedigome

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
26 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. ZS11 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 y ZS11-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1270 1008 100,919 19 57,880.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
27 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Gangan Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 None Gangan-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1220 1033 96,843 19 46,680.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
28 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Zheyou7 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 None Zheyou-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1280 1015 96,209 19 50,900.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
29 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Shengli Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 None Shengli-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1200 1001 94,586 19 52,530.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
30 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Tapidor Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 None Tapidor-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1230 1014 96,117 19 52,410.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
31 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Quinta Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 None Quinta-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1210 1003 95,492 19 55,900.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
32 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Westar Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 None Westar-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1270 1007 97,514 19 55,240.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
33 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. No2127 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v0.0 4 None No2127-v0.0 2020.01 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
1220 1011 95,385 19 53,900.00 PacBio; Illumina; Hi-C

References Reference_title
Song et al. Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus

Database_name BnPIR (Brassica napus pan-genome information resource)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
34 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Darmor-bzh Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v10.0 4 None Darmor-v10.0 2020.11 GigaScience

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
862 924 108,190 19 11,486.00 Nanopore; Illumina; BioNano

References Reference_title
Rousseau-Gueutin et al. Long-read assembly of the Brassica napus reference genome Darmor-bzh

Database_name Genoscope

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
35 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. ZS11 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v10.0 4 None ZS11-v10.0 2020.10 Plant Biotechnology Journal

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
NA 921.5 106,059 19 53,200.00 PacBio; Illumina; Hi-C

References Reference_title
Chen et al. A high-quality Brassica napus genome reveals expansion of transposable elements, subgenome evolution and disease resistance

Database_name NGDC (National Genomics Data Center)

Brassica napus ssp.oleifera-AACC

Number Species Family Genus Cultivar Common_name
36 Brassica napus ssp.oleifera-AACC Brassicaceae Brassica B. napus var. Express617 Oilseed rape

Version File_number Aanlyze Genome ID Year Journal
v1.0 4 None Express617-v1.0 2020.04 Front Plant Sci

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
NA 925 99,481 19 4,882.29 PacBio; Nanopore; Illumina; Bionano

References Reference_title
Lee et al. Chromosome-Scale Assembly of Winter Oilseed Rape Brassica napus

Database_name BnIR

Brassica nigra-BB

Number Species Family Genus Cultivar Common_name
37 Brassica nigra-BB Brassicaceae Brassica B. nigra var. YZ12151 Black mustard

Version File_number Aanlyze Genome ID Year Journal
v1.1 4 None YZ12151-v1.1 2016.09 Nature Genetics

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
591 396.9 49,826 8 557.30 Illunima

References Reference_title
Yang et al. The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection

Database_name BRAD (Brassica Database)

Brassica nigra-BB

Number Species Family Genus Cultivar Common_name
38 Brassica nigra-BB Brassicaceae Brassica B. nigra var. Ni100 Black mustard

Version File_number Aanlyze Genome ID Year Journal
v2.0 4 y Ni100_LR-v2.0 2020.08 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
570 506 59,877 8 60,800.00 Nanopore; Illumina; Hi-C

References Reference_title
Perumal et al. A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

Database_name Crucifer Genome Initiative

Brassica nigra-BB

Number Species Family Genus Cultivar Common_name
39 Brassica nigra-BB Brassicaceae Brassica B. nigra var. Ni100 Black mustard

Version File_number Aanlyze Genome ID Year Journal
v1.0 4 None Ni100_SR-v1.0 2020.08 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
570 447 56,331 8 43,900.00 Illumina; 454

References Reference_title
Perumal et al. A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

Database_name Crucifer Genome Initiative

Brassica nigra-BB

Number Species Family Genus Cultivar Common_name
40 Brassica nigra-BB Brassicaceae Brassica B. nigra var. C2 Black mustard

Version File_number Aanlyze Genome ID Year Journal
v1.0 4 None CN115125-v1.0 2020.08 Nature Plants

Estimated Size (Mb) Assembled (Mb) Gene (#) Chr(#) Scaffold N50 (Kb) Sequencer Types
608 537 67,030 8 55,700.00 Nanopore; Illumina; Hi-C

References Reference_title
Perumal et al. A high-contiguity Brassica nigra genome localizes active centromeres and defines the ancestral Brassica genome

Database_name Crucifer Genome Initiative

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS
NONE NONE NONE

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS
NONE NONE NONE

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS
NONE NONE NONE

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS
NONE NONE NONE

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS Annotation

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica napus ssp.oleifera-AACC

Genome Gff Protein CDS

Brassica nigra-BB

Genome Gff Protein CDS

Brassica nigra-BB

Genome Gff Protein CDS Annotation

Brassica nigra-BB

Genome Gff Protein CDS

Brassica nigra-BB

Genome Gff Protein CDS

species Genome Gff Protein CDS
BRO
CCA
CCB
CXA
CXB
MIZ
OIA
OIB
OIC
PCA
PCB
TBA
TCA
TUA
TUE
WTC