ID Class Order Superfamily Length Start End Strand View
Thla_scaffold109_LTR-Cassandra_41 RetrotransposonsLTRLTR-Cassandra116650162650277+
Thla_scaffold109_LTR-Cassandra_42 RetrotransposonsLTRLTR-Cassandra132650278650409+
Thla_scaffold11_LTR-Cassandra_43 RetrotransposonsLTRLTR-Cassandra326152529152854+
Thla_scaffold11_LTR-Cassandra_44 RetrotransposonsLTRLTR-Cassandra327152999153325+
Thla_scaffold11_LTR-Cassandra_45 RetrotransposonsLTRLTR-Cassandra319153482153800+
Thla_scaffold11_LTR-Cassandra_46 RetrotransposonsLTRLTR-Cassandra332508751509082+
Thla_scaffold11_LTR-Cassandra_47 RetrotransposonsLTRLTR-Cassandra332509226509557+
Thla_scaffold11_LTR-Cassandra_48 RetrotransposonsLTRLTR-Cassandra323650759651081-
Thla_scaffold11_LTR-Cassandra_49 RetrotransposonsLTRLTR-Cassandra217651282651498-
Thla_scaffold11_LTR-Cassandra_50 RetrotransposonsLTRLTR-Cassandra332651642651973-
Thla_scaffold11_LTR-Cassandra_51 RetrotransposonsLTRLTR-Cassandra217652165652381-
Thla_scaffold11_LTR-Cassandra_52 RetrotransposonsLTRLTR-Cassandra332652525652856-
Thla_scaffold11_LTR-Cassandra_53 RetrotransposonsLTRLTR-Cassandra328653000653327-
Thla_scaffold11_LTR-Cassandra_54 RetrotransposonsLTRLTR-Cassandra318950607950924+
Thla_scaffold11_LTR-Cassandra_55 RetrotransposonsLTRLTR-Cassandra334951068951401+
Thla_scaffold11_LTR-Cassandra_56 RetrotransposonsLTRLTR-Cassandra301951554951854+
Thla_scaffold11_LTR-Cassandra_57 RetrotransposonsLTRLTR-Cassandra32914112951411623+
Thla_scaffold11_LTR-Cassandra_58 RetrotransposonsLTRLTR-Cassandra26914117721412040+
Thla_scaffold11_LTR-Cassandra_59 RetrotransposonsLTRLTR-Cassandra32817902851790612-
Thla_scaffold11_LTR-Cassandra_60 RetrotransposonsLTRLTR-Cassandra32817907601791087-

< 3 4 5 6 7 > Total 42


Thlaspi arvense (v1.1)

ID:

Thla_scaffold109_LTR-Cassandra_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

116

Start:

650162  

End:

650277

Strand:

+

>Thla_scaffold109_LTR-Cassandra_41

AATGGTATCATAACCTAATCCAAGTGAAAGTGTGAAGTTAAAAGGGCTCACATCATCAGAGGAGGGACCGTCCTGTTACTTAACAAGGACGTTGCGCATTGTGAGTGGAGGTGTAT

Thlaspi arvense (v1.1)

ID:

Thla_scaffold109_LTR-Cassandra_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

132

Start:

650278  

End:

650409

Strand:

+

>Thla_scaffold109_LTR-Cassandra_42

TGTAATATCTCAATTTCAGGAATATGAATATATATGGAGAAACCTAAAAGAATTGATCTGGCTACCTACTTCACCAAAGTATAATTATTTTTTCGATCACTAGTTATTAGAAAAGTCTAAAGTTAATCGTGC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

326

Start:

152529  

End:

152854

Strand:

+

>Thla_scaffold11_LTR-Cassandra_43

CATTTGAATAAGTTTAAATGGATTGATTTGGCTACCTATGTCACCAAAGTGCACTTATCTTTTCGGTTAGTGGGCCCGAGAGAACTCCAGAGTTAAGCGTGCTTGAGCTAGAGTAGGACTAGGATGGGTGACCTTTCGGGAAGTGATTCACGAAACCGTGTGAGTGAGGCCAAAACACGGGGAAATATTATGTGGTGATTGCAGGGTCAGTATAAGTCGGTTGGGCTCCAGAAAAAATAACGCACTGGCCGTCAGTCAGGGGCGGGGCCCACGAGTCTGACGGAGGGATGGGTGACTTGCCGGTAAGGGCGGTCGGGGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

327

Start:

152999  

End:

153325

Strand:

+

>Thla_scaffold11_LTR-Cassandra_44

CATATGAATAAGTTTAAATGGATTGATTTGGCTAGCTATGTCACCAAGGTGCACTTATCTTTTCGGTTAGTGGGCCCGAGAGAACTCTAGAGTTAAGCGTGCTTGAGCTGGAGTAGGACTAGGATGGGTGACCTTTCGGGAAGTGATTTCCGAAACCGTGTGAGTGAGGCCAAAACACGAGGAAATATTATGTGGTGATTGAATGGTCAGTAAATAAGTCGGTTGGGCTCCAGGAAAAATAACACACCAGCCGTCGAACATGAGCAGGGCCCACGAGCCCGACGGAGGGATGGGTGACTTGCCGATAGGGGCGGTCGGGGGGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

319

Start:

153482  

End:

153800

Strand:

+

>Thla_scaffold11_LTR-Cassandra_45

AAGTTTAAATGGATTGATTTGGCTATCTATGTCACTAAAGTACACTTATCTTTCCGGTTAGTAGGCCCGAGAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGTAGGACTAGGATGGGTGACCTTTCGGAAAGTGATTCCCGAAACCGTGTGAGTGAGGCCAAAATACGAGGAAAGATCATGTGGTGATTGCAGGGTCAGAAAATAAGTTGATTGGGCTCCGGGAAAAATAACGCACCGGCCGTCGGACAGGAGCGGGGCCCACGAGCCTGATGGAGGGATGGATGACTCACCGATAGGGGCGATCGGAGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

508751  

End:

509082

Strand:

+

>Thla_scaffold11_LTR-Cassandra_46

GATCCATTTGAATAAGTTTAAATAGATTAATTTGGCTATCTATATCATCAAAGTGCACTTATCTTTTCGGTCACTAATCCCGAGAGAACTCCACAGTTAAGGGTGCTTGAGCTGGAGTAGGACTAGGATAGGTGACCTTTCGGGAAGTGATTTCCGAAACCATGTGAGTGAAGCCAAAACACGGAAAAAGATCATGTGGTGATTGCAGGGTCAGTAAATAAGTCGGTTGGGGTCCGGAAAAAATAACGCACCGGCCGTCGGACAAGGGCGGGGCCCACGAGCCCAACAGAGGGATGGGTGACTCGCCGGTAGGGGCGGTCGGGGACGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

509226  

End:

509557

Strand:

+

>Thla_scaffold11_LTR-Cassandra_47

GGTCTATTTGAATAAGTTTAAATGGATTAATTTGGCTACCTATGTCATCAAAGTGCACTTATTTTTTCAGTCACTAGTCCCGAGAGAACTCCACAGTTAAGGGTGCTTGAGCTGGAGTAGGACTAGGATGGGTGACCTTTCGGGAAGTGATTTCCGAAACCGTGTGAGTAAGACCAAAACATGGAGAAAGATCATGTGGTGATTGCAGAGTCAGTAAATAAGTCGGTTAGGGTCCGGAAAAAATAACGCACCGGCCGTCGGACAAGGGCGGGGCCCACGAACCCGACGGAGGGATGGGTGACTCGCCGATAGGGACGGTCGGGGGCATTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

323

Start:

650759  

End:

651081

Strand:

-

>Thla_scaffold11_LTR-Cassandra_48

TATAACGCCTCCGACCGTCCATTCCGGCGAGTCATCCATTCCTCCGTTGGGCTCGTGGGCCCCGCCTCTGTCCGACGGTTAGTGCGTTATTTTTCCTGGATTCCAACCGATTTATTTACTGACCCTACAATCACCACATGATCTTTCTCTATGTTTTGGTCTCACTTACACGGTTTCGGGAATCACTTCCCGAAAGGTCACCCATCCTAATCCTTCTCCAGCATAAGCACACTTAACTGTGGAGTTCTCTTGGGACAAGTGACCGAAAAGATAAGTACACTTTAATGACATAGGTAGCCCAATTAATCCATTTAAACTTATTC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

217

Start:

651282  

End:

651498

Strand:

-

>Thla_scaffold11_LTR-Cassandra_49

TTACTGACCCTGCAATCACCACATGATCTTTCTCTATGTTTTGGCCTCACTTACACGGTTTCGGGAATCACTTCCCGAAAAGTCACCCATCCTAGTCCTTCTCCAGCATAAGCACACTTAACTGTGGAGTTCTCTTGGGACAAGTGACCGAAAAGATAAGTGCACTTTACTGATATAGGTAGCCCAATTAATCCATTTAAACTTATTCAAATGGGCC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

651642  

End:

651973

Strand:

-

>Thla_scaffold11_LTR-Cassandra_50

TGTAACGCCCTCGACCGCCCATTCCGGCGAGTCATCCATCCCTCCGTCGGGCTCGTGGGCCTCGCTTCTGTCCGACGGTCAGTGCGTTATTTTTCCCGGACCCCAACGGACTTATTTACTGACCCTGTAATCACCACATGATCTTTCCCCATGTTTTGGCCTCACTTACACGGTTTCGGGAATCACTTCCCGAAAGGTCACCCATCCTAGTCCTTCTCCAGCATAAGCACCCTTAACTGTGGAGTTCTCTTGGGACAAGTGACCGAAAAGATAAGTACACTTTAATGATATAGGTAGCCCAATTAATCCATTTAAACTTATTCAAATGGGCC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

217

Start:

652165  

End:

652381

Strand:

-

>Thla_scaffold11_LTR-Cassandra_51

TTACTGACCCTGCAATCACCACATGATCTTTCTCTATGTTTTAGCCTCACTTACACGGTTTCGGGAATCACTTCCCGAAAAGTCACCCATCCTAGTCCTTCTCCAGCATAAGCACACTTAACTGTGGAGTTCTCTTGGGACAAGTGACCGAAAAGATAAGTGCACTTTACTGACATAGGTAGCCCAATTAATCCATTTAAACTTATTCAAATGGGCC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

652525  

End:

652856

Strand:

-

>Thla_scaffold11_LTR-Cassandra_52

TGTAACGCCCCCGACCGCCCATTCCGGCAAGTCACCCATCCCTCCGTCGGGCTCGTGGGCCCCGCCCCTGTCCGACGGCCAGTGCGTTATTTTTCCCGGACCCCAACCGACTTATTTACTGACCCTGCAATCACCACATGATCTTTCCCCATGTTTTGGCCTCACTTACACGGTTTCGGGAATCACTTCCCGAAAGGTCACCCATCCTAGTCCTTCTCCAGCATAAGCACCCTTAACTATGGAGTTCTCTTGGGACCAGTGACCGAAAAGATAAGTACACTTTAATGACATAGATAGCTAAATTAATTCATTTAAACTTATTCAAATGGGCC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

328

Start:

653000  

End:

653327

Strand:

-

>Thla_scaffold11_LTR-Cassandra_53

TGTAACGCCCCCGACCGCCCATTCCGGCGAGTCACCCATCCTTCCGTCGGGCTCGTGGGCCCCACCCCTGTTCGACGGCCAGTGCGTTATTTTTCCTGGACCCCAACCGACTTATTTACTGACCCTGCAATCACCACATGATCTTTCCCCATGTTTTGGCCTCACTTACACGGTTTCGGGAATCACTTCCCGAAAGGTCACCCATCCTAGTCCTTATCCAGCATAAGCACCTTTAACTGTGGAGTTCTCTTGGGACCAGTGACCGAAAATATAAATGCACTTTAATGACATAGATAACTAAATTAATCCATTTAAACTTATTCAAATG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

950607  

End:

950924

Strand:

+

>Thla_scaffold11_LTR-Cassandra_54

TTTAAATGGATTAATTTGGCTATCTATATCATTAAAGTGCACTTACCGATTCCAGTCACTTACCTTGAGAGAACTCCAGAGTTAAGCGTACTTAAGCTGTAGTAGGGTTAGGATGGGTGACCTTCTGGGAAGTAATCTGCGGAATTGTGTGAGTGAGGCCAAAATACGGGGAAATATCATATATTAATTGCAGGGTCAGTAAATAAGTTGGTTGGGATCCGAAAAAAAAAACGCATCGGCCGTCAGACAGGGGTTGGCCCACGAGCTTGAGAGAGGACGTGGGTGTGCTCATCGGTAGGAGCAGTCAGAGGTATTATA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

334

Start:

951068  

End:

951401

Strand:

+

>Thla_scaffold11_LTR-Cassandra_55

GGCCCATTTGAATAAATTTAAATAGATTGATTTGGCTACCTATATAATCAAAGTGCACTTACCTTTTCCAGTCATTTACCTCGAGAGAACTCCAGAGTTAAGCATGCTTAAGCTGGAGTAGGACTAGGATGGGTGACCTTCCGAAAAGTATTATGCGAAACCGTGTGAGTGAGACCAAAACACGGAGAAAAGTCACATGGTGATTGGAGGGTCAGTAAATAAGTTGGTTAGGCTCCAGGAAACATAATGCACCAGCCGTCGGACAGGGGTGGTGCCCACGGGCCCGAGAGGGGACGTGGGTGTGCTCACCTGTAGGGACCCTCGGGGTGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

301

Start:

951554  

End:

951854

Strand:

+

>Thla_scaffold11_LTR-Cassandra_56

GAATAAATTTAAATAGATTGATTTGGCTACCTATATTATCAAAGTGCACTTATATTTTCTCGTCATTTACCTCGAGAGAACTCCAGAGTTAAGCGTGCTTCAGTTGGAGTAGGACTAGGATGGGTGACCTTCTGGAAAATATTCTGCGGAACCGTATGAGTGAGGCCAAAATACGAGGAAAAGCCACGTGGTGATTGCATGGTCAGTAAATAAGTCGGTCGGCCTTTAGATAAAGGTGGAGTCCACAGACCCGAGAGAGGATGTGGGTGTGCTCACCGGTAGGAGCCGTTGGGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

329

Start:

1411295  

End:

1411623

Strand:

+

>Thla_scaffold11_LTR-Cassandra_57

CATTTGAATAAGTTTAAATGAATTAATTTGGTTACTTATGTCATTAAAGTGCATTTATTTTTTCGGTCACAGGCTCCGAGAGAACTCCACAGTTAAGGGTGCTTATGTTGGAGTAGGACTAGGATGGGTGACCTTCCGGAAAGTGATTCCCGAAACCGTATGAGTGAGGCCAAAACACTGGGAAAGATCATGTGGTGATTGCAGGATCAGTAAATAAGTCGGTGGGGCTCCGGAAAAAATAACGCACCGGTCGTCGGACAGGGGCGGGACCCACGAACCCGACAGAGGGATGGGTGACTCGCCGGTAGGGGCGGTCGAGGGGCGTTACA

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

269

Start:

1411772  

End:

1412040

Strand:

+

>Thla_scaffold11_LTR-Cassandra_58

CATTTGAATAAGTTTAAATGGATTAATTTGGCTACCTATGTCATCAAAGTGCACTTATCTTTTCGGTCACAGATCCCGAAAGAGCTCCACAGTTAAGGGTGCTTATGCTGGAGTAGGATTAGGATGGGTGACCTTCCGAGAAGTGATTCCTGAAACCGTGTGAGTGAAGCCAAAACACTGGGAAAAATCATGTGGTGATTACAGGGTCAGTAAATAAGTCGGTGAGACTCCGGGAAAAATAACGCACCGGCCGTCGGACAAAGCTCGGC

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

328

Start:

1790285  

End:

1790612

Strand:

-

>Thla_scaffold11_LTR-Cassandra_59

TGTAACGCCCCCGACCGCCCATTCCGGCGAGTCACCCATCCATCTGTCGGGTTCGTGGGCCCCGCTCCTGTCCGATGGTCAGTGCGTTATTTTCCCCGGTGCCCAACCGACTTATTTACTAACCCTGCAATCACCACATGATCTTTCCCCGTGTTTTGGCCTCACTCACATGGTTTCGGGAATCACTTTTCGAAAGGTTACCCATCCTAGTCCTACTCCAGCATAAGCACCCTTAACTGTGGAGTTCTCTCAGGACATGTGACCAATAAGATAAGTGTACTTTGATGATATAGGTAGCCAAATTAATCCATTTAAACTTATTCAAATG

Thlaspi arvense (v1.1)

ID:

Thla_scaffold11_LTR-Cassandra_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

328

Start:

1790760  

End:

1791087

Strand:

-

>Thla_scaffold11_LTR-Cassandra_60

TGTAACGCCCCTGACCGCCCATTCCGGCGAGTCACTTATCCCTCTGTCGGGCTCGTGCGCCCCGCTCCTGTCCGACGGTCAGTGCGTTATTTTTCCTGGTGCCCAACCGACTTATTTATTGACCCTGCAATCACCACATGATCTTTCCCCGTGTTTTGGCCTCACTCACATGGTTTCGGGAATCACTTTCTGAAAGATCACCCATCCTAGTCCTACTCCAGCATAAGCATCCTTAACTGTGGAGTTCTCTCAGGACATGTGACCGAAAAGATAAGTGTACTTTGATGACATAGGTAGTCAAATTAATCCATTTAAACTTATTCAAATG