ID:

Thla_scaffold115_LTR-Cassandra_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

288

Start:

458858  

End:

459145

Strand:

-

>Thla_scaffold115_LTR-Cassandra_81

TGTAACGCCCCCCCGACCGCCCTTACCGGCGAGTCACCCATCCCTCCGTCAGGCTCATGGGCCCCGCCCCTGTACGACGGCCGGTGCGTTATTTTTTTTCCGGAGCCCAACCGACTTATTTACTGACCCTACAATTATCACATGATCTTTCCCCGTGTTTTGGTCTCAATCACACGGTTTCAGAAATCACTTCCCGAAAGATCACCCATCCTAGTCCTGTTATAGCTCAGGCACGCTTAACTCTGGAGTTCTCTCAGGCCCACTAACCGAAAAGATAAGTTCACTTTG

ID:

Thla_scaffold115_LTR-Cassandra_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

330

Start:

459594  

End:

459923

Strand:

-

>Thla_scaffold115_LTR-Cassandra_82

TGTAACGCCTCCGACCGCCCCTACCGGCGAGTCACCCATCCCTCCGTCGGGCTCGTGGGCCCCGTCCTTGTCCGACAGCCGGTGCGTTATTTTTTTCTCATAGCCCAACCAACCTATTTACCAACCTTGCAATCACCACATGATCTTTTCCCGTGTTTTGGTCTCACTCACACGGTTTCGGGAATCACTTCCCAAAATTCCCAAAAGGTCACCCACCCTAGTCCAGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCAGACCCACTAACCGAAAAGATAAGTGCAATTTGATGACATAGGTATCCAAATCAATTCATTTTAATCC

ID:

Thla_scaffold115_LTR-Cassandra_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

184

Start:

461108  

End:

461291

Strand:

-

>Thla_scaffold115_LTR-Cassandra_83

CACATGATCTTTCCCCGTGTTTTAGTCTCAATCACACGGTTTCGGAAATCACTTCCCGAAAGATCACCCATCCTAGTCCTGTTCTAGCTCAGGCACGCTTAACTCTGGAGTTCTCTCAGGCTCACTAACCGAAAAGATAAGTTCACTTTGATGACATAGGTAGCCAAATCAATCCATTTAAATC

ID:

Thla_scaffold115_LTR-Cassandra_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

330

Start:

461459  

End:

461788

Strand:

-

>Thla_scaffold115_LTR-Cassandra_84

TGTAACGTCTCCGACCGCCCCTACCGGCGAGTCACCCATCCCTCCATCGGGCTCGTGGGCCCCGTCCTTGTCCGACAGCCGGTGCGTTATTTTTTTCTCATAGCCCAACCAACCTATTTACCAACCTTGCAATCACCACATGATCTTTTCCCGTGTTTTGGTCTCACTCACACGGTTTCGGGAATCACTTCCCAAAATTCCCAAAAAGTCACCCACCCTAGTCCAGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCAGCCTCACTAACCGAAAAGATAAGTGCACTTTGATGACATAGGTATCCAAATCAATTCATTTTAATCC

ID:

Thla_scaffold115_LTR-Cassandra_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

327

Start:

680319  

End:

680645

Strand:

-

>Thla_scaffold115_LTR-Cassandra_85

TGTAACGCCTCCGATCGCCCATTCGGCGAGTCATCCATCCCTCAGTGGGGTTTGTGGGCTACGCCCCTGTCCGACGGCCGGTGCGTTATTTTTTCTGGAGCCCAACTGACTTATTTACTGACCCTGCAATCACCACATAATCTTTCCCCGTGTTTTGGCCTCACTCACACAGTTTCGGGAATCACTTCCCGAAAGGTCATCCATCATAGTCCTACTCCAGCTCAAGCACCCTTAACTGTAGAGTTCTCTTGGGACCAGTGACCGAAAAGATAAGTACACTTTGATGACATAAGTAGCCAAATCAATCCATTTAAACTTATTCAAATG

ID:

Thla_scaffold115_LTR-Cassandra_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

327

Start:

680814  

End:

681140

Strand:

+

>Thla_scaffold115_LTR-Cassandra_86

CATTTGAATAAGTTTAAATGGATTGATTTGGCTACCTATGTTACCAAAGTGCATTAATCTTTTCGGTCACTGGTCCCGAGAGAACTCCACAGTTAAAGGTGCTTGAGCTGGAGTAGGACTAAGATGGGTGACCTTTCGGAAAGTGATTCCCGAAACCGTGTGAGTGAGGCCAAAACACGGGGAAAGATCATGTGGTGATTGCAGGGTCAATAAATAAGTCAGTTGGGCTCCGGAAAAAATAACGCACCGGCCATCGGACAGGGGCGGGCCCACGAGCCCGACTGAGGGATGGGTGACTCGTCGGCAGGGGCGGTCGGGGGCGTTACA

ID:

Thla_scaffold116_LTR-Cassandra_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

268082  

End:

268399

Strand:

+

>Thla_scaffold116_LTR-Cassandra_87

CATTTGAATAAGTTTAAATAGATTAATTTAGCTATTTATGTTATTGTGCAGTTATTTTGTTGGTTAGTAAGTCTGAGAAAACTCCAGAATTAAGCAGGCTTGAGCTAGAGTAAGATTAGGATAGGTGATTTTTCGGGAAGTGATTCTCCAAACCGTATGAATAAGGCTAATCTCTAGAAAAAAAATCATATGATGATTGAATGGTTAGTAAATAAGTCGGTTGAGCTCCGAGAAAAATAACGCACCGGCCGTCGAAAAAGCTCACAGATCCGAGAAAGAAAGTGGGTGTGCTCACCAGAGACGGTCAGAGGTGTTACA

ID:

Thla_scaffold116_LTR-Cassandra_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

318

Start:

879729  

End:

880046

Strand:

-

>Thla_scaffold116_LTR-Cassandra_88

TGTAACACCTCCGACCGCCCCTACCGGCGAGTCACCCATCCCTCCATCGGGCTCGTGGGCCCTGTCCCTGTCCAACGATTGGTGAGTTATTTTCCCTGGAGCCCAACCGACTTATTTACTGACCCTGCAATCACCACATGTTATTTCCCCATGTTTTGACCTCACTCCCACGGTTTCGGGAATCACTTCTCGAAAGGTCACCCATCCTAGTCCTGCTCCAGCTCAAGCACCTTTAATGTGGAGTTCTCTCGGGACTAGTGACCGAAAAGATACGTGCACTTTGGTGACATATGTAGCCAAATTAATCCATTTAAACTT

ID:

Thla_scaffold116_LTR-Cassandra_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

281

Start:

880202  

End:

880482

Strand:

-

>Thla_scaffold116_LTR-Cassandra_89

TGTAACACCTCCGACCGCCCCTACCGGCGAGTCATCCATCCCTCTGCCGGGCTCGTGGGCCCCGTCCCTGTCCGACGGTCGGTGAGTAATTTTTTCCGGAGCCCAACTGACTTATTTACTGACCCTGCAATCACCACATGATATTTCCCCGTGTTTTGACCCCACTCCCACGCTTTCGGAAATCACTTCCCCAAAGGTCACTCATCCTAGTCCTGCTCCAGCTCAAGCACCCTTAACTGTTGTGGAGTTCTATCGGGATCAGTGACTGAAAGGATAAGTGC

ID:

Thla_scaffold117_LTR-Cassandra_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

320

Start:

239982  

End:

240301

Strand:

+

>Thla_scaffold117_LTR-Cassandra_90

GAATAAGTTTAAATAGATTGATTTGGCTACCTTATCATCAAATTACACTTATCTTTTTGGTTAGTGGATCTGAGAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGCAGAACTATGATGTGTAATCTTTTGGAAAGTGATTCCCGAAACCGTGTGAGTGAAGCCAAAACACGGAGAAATATTATGTGGTGATTGCAGGGTCAGTAAATAAGTCGCTTGGGCTCGAGAAAAATAATGCACTGGCCGTCGAACAGGGGCGGGGCCTACGAGCCCGATAGAGGGATGGGTGACTTGCTGGTATGGGCGGTCGGGGTGTTACA

ID:

Thla_scaffold117_LTR-Cassandra_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

329

Start:

240445  

End:

240773

Strand:

+

>Thla_scaffold117_LTR-Cassandra_91

GGCCCATCTGAATAAGTTTAAATGGATTGATTGACTATCTATGTCATCAAAGTGCACTTATCTTTTCGGTTAGTGGACCTGAGAGAACATCAGAGTTAAGCGTGTTTGAGCCCGAGCAGGACTAGGATGAGTGACCTTTCGGGAAGTGATTCCCGAAACCGTGTGAGTAAGGCCAAAACACAGAGAAATATCATGTGGTGATTGCAGGATCAGTAAATAAGTCGGTTGGGCTCGAGAAAAATAACGCACCGACCGTCGGACAGGGGCGGGGCCCACGAGCTCGACGGAGGGATGGGTGACTCGCCGGTATGGGTGGTCGAGGTGTTACA

ID:

Thla_scaffold117_LTR-Cassandra_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

298

Start:

715827  

End:

716124

Strand:

+

>Thla_scaffold117_LTR-Cassandra_92

ATTCGAATAACTTTAAATGGATTGATTTAGCTACCTATGTAACCAAAGTGAATTTATCTTTTCTGTTAGTGAGCCCCAGAAAACTCCAGAGTCAAGCGTGCTTGAGCTGGAGCAGGACTATGATGGGTGACCTTTCGGGAAGTAATTCCCGAAACCGTGTAAGTGAGTCAAAAACACGGAGAAAAATCATGTGGTGATTGCAGGGTTAGTAAAAATATCGGTTGGGTTCCAAAAAAAATAACACACCAGCTGTCGGACAAGGGCGGGGTCCACAAGCCCGACGGATGGGGGGGTGGGG

ID:

Thla_scaffold117_LTR-Cassandra_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

274

Start:

775963  

End:

776236

Strand:

+

>Thla_scaffold117_LTR-Cassandra_93

TTTTAATGGATTAATTTGGCTACCTATGTCACCAAAGTGCATTTATCTTTTCGGTTAATGAGCTTGAGAGAACTCCAAAGTTAAGCATGCTTGAGCTAGAGCAGCACTAGGATGGGTGACCTTCAAGGAAGTGATTCCCGAAACTGTGTGAGTGAGGCCAAAACACGGGGAAAGATCATGTGGTGATTGCAGGTTGGTAAATAAGTCGGTTGGGCTCCAGTAAAAATAACACACCGGCTGTCGGACAAGGGCGGGGTCCACGAGCCCGACAAAG

ID:

Thla_scaffold118_LTR-Cassandra_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

319

Start:

503225  

End:

503543

Strand:

-

>Thla_scaffold118_LTR-Cassandra_94

CAACCGCCCATTCCGGCAAGTCACCCATCCCTCTGTCGGGCTCATGGACCCTGCCCCTGTCCGACGGCTGGTGCATTATTTTTTTTTTAGATTCCAACCGACTTATTTACTGACCCTGCAATAACCATATGATTTTTCCTCGTGGTTTGACTTCACTCACACGGTTTCAGGAATCACTTCCCGAAAAGTCACTCATCCTAGTCCTACTCCAGCATAAGCACCCCTAACTATGGAGTTCTCTCGGAACCTGTGACCGAAAAAATAAGTGCACTTTGATGACATAGATAACCAAATTAATCCATTTAAACTTATTCAAATG

ID:

Thla_scaffold119_LTR-Cassandra_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

176

Start:

336173  

End:

336348

Strand:

+

>Thla_scaffold119_LTR-Cassandra_95

TGTAACATCCTGATATCAGGAATATGAATGTATATATAGAGTCTTAAGATAATTGATTTGGGTATCTATATCACCAAAGTGCATTTATCTTTTCGATCACTGGTCTCAAGAGAACTCCAAAGTTAATCGTGCTTGAGCTGGAGTAGCACTAGGATGGGTAACCAATCAGGAAGTGA

ID:

Thla_scaffold119_LTR-Cassandra_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

354

Start:

336374  

End:

336727

Strand:

+

>Thla_scaffold119_LTR-Cassandra_96

TGTAACATCCTGATATCAGGAATATGAATGTATATATAGAGTCTTAAGATAATTGATTTGGGTATCTATATCACCAAAGTGCATTTATCTTTTCGATCACTGGTCTCAAGAGAACTCCAAAGTTAATCGTGCTTGAGCTGGAGTAGCACTAGGATGGGTAACCAATCAGGAAGTGAATTCTGATATCGCGTGAGTGAGGAAAAATCACGGGAAAAGATCACATGGTGATTGCAGAGTCGGTATTTCATGACTTTCGAGCCTCCTGACTAACATACTGCTATCGGACAGGAGCGAAACCCACATTCTCGAGAGAGGACGTAGGTGTTCACTGGTAGGAGTGGCCGGGGCGTTACA

ID:

Thla_scaffold119_LTR-Cassandra_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

176

Start:

370645  

End:

370820

Strand:

+

>Thla_scaffold119_LTR-Cassandra_97

TGTAACATCCTGATATCAGGAATATGAATGTATATATAGAGTCTTAAGATAATTGATTTGGGTATCTATATCACCAAAGTGCATTTATCTTTTCGATCACTGGTCTCAAGAGAACTCCAAAGTTAATCGTGCTTGAGCTGGAGTAGCACTAGGATGGGTAACCAATCAGGAAGTGA

ID:

Thla_scaffold119_LTR-Cassandra_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

354

Start:

370856  

End:

371209

Strand:

+

>Thla_scaffold119_LTR-Cassandra_98

TGTAACATCCTGATATCAGGAATATGAATGTATATATAGAGTCTTAAGATAATTGATTTGGGTATCTATATCACCAAAGTGCATTTATCTTTTCGATCACTGGTCTCAAGAGAACTCCAAAGTTAATCGTGCTTGAGCTGGAGTAGCACTAGGATGGGTAACCAATCAGGAAGTGAATTCTGATATCGTGTGAGTGAGGACAAATCACGGGAAAAGATCACATGGTGATTGCAGAGTCGGTATTTCATGACTTTCGAGCCTCCTGACTAACATACTGCTATCGGACAGGAGCGAAACCCACATTCTCGAGGGAGGACGTAGGTGTTCACTGGTAGGAGTGGCCGGGGCGTTACA

ID:

Thla_scaffold12_LTR-Cassandra_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

66689  

End:

67019

Strand:

+

>Thla_scaffold12_LTR-Cassandra_99

GATCCATTTGAATAAATTGAAATGGATTGATTTGGCTATATATGTCATTTAAGTACATTTATTTTTTCGGTTAGTGGGCATGAGAGAACTCCAAAATTAAGCGTGTTTTAACTAGAGCAGAACTAAGATGAGTGACATTTCAGAAAGTGATTCCCGAAACAGTGTGAGTGTGGCTAAAACACGAGGAAAGATCATGTGGTGATTGCAGTGTCAGTAAATAAGTCAGTTGGGCTCCGGAAAAAATAACGCACCGACTGTCGGACAGGGGCGAGGCCCACGAGCCCGACGGAGGGATGGGTGACTCGCCGGTAGGGGTGGTCGGGGTGTTACA

ID:

Thla_scaffold12_LTR-Cassandra_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

327

Start:

67163  

End:

67489

Strand:

+

>Thla_scaffold12_LTR-Cassandra_100

GGCCCATTTGAATAAGTTTAAATGAATTGATTTGACTATCTATATCACTAAAGTGCACTTGTCTTTTTGGTCACTGGTCTCGAGAGAATTCCACAGTTAAGGATGCTTGAGCAGAGTAGGACTAGAATAGGTGACTTTTCGGGAAGTGATTTCCAAAACCATGTGAGTGAGGGCAAAACATGAGGAAAAATCATATGATGATTACAGGATTAGTAAATAAGCCGGTTAGACTCCGAAAAAATAACGCACCGGCCGTCGGACATAGACGGGCCCACAAGCCCGACAGAAAGATGGATGACTCGCCGGTAAAGACGGTCCGGGTGTTAC