ID Class Order Superfamily Length Start End Strand View
Scaffold1671_SINE-tRNA_41 RetrotransposonsSINESINE-tRNA18212495241249705+
Scaffold1690_SINE-tRNA_42 RetrotransposonsSINESINE-tRNA3161024910564-
Scaffold1714_SINE-tRNA_43 RetrotransposonsSINESINE-tRNA1645146351626-
Scaffold17192_SINE-tRNA_44 RetrotransposonsSINESINE-tRNA16331843346+
Scaffold17228_SINE-tRNA_45 RetrotransposonsSINESINE-tRNA30146054905+
Scaffold17394_SINE-tRNA_46 RetrotransposonsSINESINE-tRNA14262203+
Scaffold1744_SINE-tRNA_47 RetrotransposonsSINESINE-tRNA1028620886309+
Scaffold1750_SINE-tRNA_48 RetrotransposonsSINESINE-tRNA15665176672-
Scaffold1750_SINE-tRNA_49 RetrotransposonsSINESINE-tRNA10790859191-
Scaffold1750_SINE-tRNA_50 RetrotransposonsSINESINE-tRNA10792339339-
Scaffold1752_SINE-tRNA_51 RetrotransposonsSINESINE-tRNA991836718465-
Scaffold1752_SINE-tRNA_52 RetrotransposonsSINESINE-tRNA1281846718594-
Scaffold17605_SINE-tRNA_53 RetrotransposonsSINESINE-tRNA85425509-
Scaffold18223_SINE-tRNA_54 RetrotransposonsSINESINE-tRNA13562836417-
Scaffold18298_SINE-tRNA_55 RetrotransposonsSINESINE-tRNA16738764042+
Scaffold18326_SINE-tRNA_56 RetrotransposonsSINESINE-tRNA9214991590-
Scaffold18329_SINE-tRNA_57 RetrotransposonsSINESINE-tRNA1618711031+
Scaffold1876_SINE-tRNA_58 RetrotransposonsSINESINE-tRNA1075563255738+
Scaffold1890_SINE-tRNA_59 RetrotransposonsSINESINE-tRNA971172411820-
Scaffold1890_SINE-tRNA_60 RetrotransposonsSINESINE-tRNA981185311950-

< 3 4 5 6 7 > Total 15


Capsella grandiflora (v1.1)

ID:

Scaffold1671_SINE-tRNA_41

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

182

Start:

1249524  

End:

1249705

Strand:

+

>Scaffold1671_SINE-tRNA_41

GTGGAAGCTCCCTTAGTCTAGTGGTTGACGAAGGGTCGTTTAAAGCTTCTACACCAAGAGGTCTGGGGTTCGACGCCCAGGTAATGCgatttatttaatttgcagattaaggagataagcttacaggagatcTATAACAATGCACAATTAGAACCGTTCGCCGTGATTCTACGCATGGAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1690_SINE-tRNA_42

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

316

Start:

10249  

End:

10564

Strand:

-

>Scaffold1690_SINE-tRNA_42

CGTCATTAGATTTATTACTTACTGCAAATTATGAGAACAGTTAAAAAGATAATTCTACCATTGATAATTTCTTCGGACCCTATTAGATTTACTATTGACAACATTCTATGCTGATCTTAAACACCTTCTTCTCCTTCAATAAGTAGAATCACTGCGAACAATTCTAATTGCGCATCACTGGAGATTTCATGTAAATTTGTCTCTTTAATCTAGATAATTATTAATAAATCTCATTATATGAGACTCAAACCACAAAATTCTTGGTTAGAAGCAATATTAAACCCATGGTCAAGCACCGGGAGAAAGGGGCTTCCAC

Capsella grandiflora (v1.1)

ID:

Scaffold1714_SINE-tRNA_43

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

51463  

End:

51626

Strand:

-

>Scaffold1714_SINE-tRNA_43

ttttTTTTTTTTAAATAATCAAAGAGGTTCTGGGCCAAAGCCCGTACATCCCCTCGGGCCCGAAACCAATGCATGTTATATAGTTACGTCCTAATCGCTACTCGAACCGGCGACCTCTAAGCTTTTGACAGAAATCTTTACTAATTGAGCTATTAGCACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold17192_SINE-tRNA_44

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

3184  

End:

3346

Strand:

+

>Scaffold17192_SINE-tRNA_44

ACCAAGTGTTAATAGCTCAATTAATAAAAAATTCTCGCAAAATCCTTGAGGTCGCCAGTTCGAATAACGCTTGGGACGAGACTATATAACATGTCCTGGTCTCGGGTCTCAGAGGATGTATGAAATTCGGCTCAGAACCTCTTAATTATTCAAAAAATAATAA

Capsella grandiflora (v1.1)

ID:

Scaffold17228_SINE-tRNA_45

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

301

Start:

4605  

End:

4905

Strand:

+

>Scaffold17228_SINE-tRNA_45

GTGGAAGCTCCCTTGGTCCAGTGGTTGACGAAAGGTTGTTAAAAGTTTCTACACCTAGAGATCTAGGGTTCGAAGACCAAGTAATACAATATATTAATTTGCAGATTAAAGAGACAAGCTTACAGGAGTTCTATAACAATGCATAATTAGAACCGTTCGCCGTGATTCTACGCATGGAGAAGGAGGTGTCGTCGGAAAAGGGTGTAATCTGTGGTGAATCTAATAGGGTCGGACATAATTATCGGTAGTAGAATCGTCATTGTAACAATTCTCATAATTTGCAATAaacaataaatcaaga

Capsella grandiflora (v1.1)

ID:

Scaffold17394_SINE-tRNA_46

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

142

Start:

62  

End:

203

Strand:

+

>Scaffold17394_SINE-tRNA_46

GGTAAACATTCTTTGGCAAAAGCCTAGTAGTCGCCGGTTCGAGTAGCGCTTAAACGAAACCATATAATATGTTTTGGTCTCGAGCTCGAGGAAATGTATAGATTTCGGCCCAGAATTTCTTAGTTATTCAAAAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1744_SINE-tRNA_47

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

102

Start:

86208  

End:

86309

Strand:

+

>Scaffold1744_SINE-tRNA_47

GGCAAATGTCTAAAGGTCGCCGGTTTAAGTAACGCTTGTGACGAGAGACCTGAAAGGATGTATGGGCTTCGGCCCAAAACCTCTTTGTTATTAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1750_SINE-tRNA_48

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

156

Start:

6517  

End:

6672

Strand:

-

>Scaffold1750_SINE-tRNA_48

TTTTTTATAATAACTAAGTGGTTCTAGGCCGAAACACATACATCCTCTGAGACTAGAGACCAGAGCATGTAATATGGTCTTTTCCAAGCACTACTCGAACTAGCGTCCTCTAAACTTTTGTCAGAGATCTTTAGCGATTGAACTATTAGCATTTGG

Capsella grandiflora (v1.1)

ID:

Scaffold1750_SINE-tRNA_49

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

107

Start:

9085  

End:

9191

Strand:

-

>Scaffold1750_SINE-tRNA_49

TTTTTTTTTTGAATAACTAATAGGTTTTGGACCGAAACTCATATATTACTCAAGTTCGAGTCAAAAACAGATTATGTGGTCTCATTGCAAGCGCTATTCGAACCGAC

Capsella grandiflora (v1.1)

ID:

Scaffold1750_SINE-tRNA_50

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

107

Start:

9233  

End:

9339

Strand:

-

>Scaffold1750_SINE-tRNA_50

TTCTTTTTTTTTAATAACTAAGAAGTTTGGACCAAAACTCATACATTACTCAAGTTCGAGACAAGAACATATTATATAGTCTCGTTGCAAGCGCTACTCGAACCGAC

Capsella grandiflora (v1.1)

ID:

Scaffold1752_SINE-tRNA_51

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

99

Start:

18367  

End:

18465

Strand:

-

>Scaffold1752_SINE-tRNA_51

TTTTTTTTTTttttttaaacaATTAAGAGGTTGTGGGCCAAACCCGTATATCCCCTCAACCCTGAAACCAGAACATGTAATATAGTCTCGTCCCAATCG

Capsella grandiflora (v1.1)

ID:

Scaffold1752_SINE-tRNA_52

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

128

Start:

18467  

End:

18594

Strand:

-

>Scaffold1752_SINE-tRNA_52

TCTTTTTTTCTTTAACTAAGAGGTTTTGGAACAAAGTCCATACTTTCACTCAGACCCGAAACCAGAGCATGTAATATGGTCTCGTGATCTCGTCCCAAACACTACTCGAACCGGCGATCTCTAAGCTT

Capsella grandiflora (v1.1)

ID:

Scaffold17605_SINE-tRNA_53

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

85

Start:

425  

End:

509

Strand:

-

>Scaffold17605_SINE-tRNA_53

TTTTTTTTTTTTGAATAATCAAAGAGGTTCTGGGCCGAAGTCCATACATCCTCTCAGGCCCAAAACCAAAGCATGTTATATGTTT

Capsella grandiflora (v1.1)

ID:

Scaffold18223_SINE-tRNA_54

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

135

Start:

6283  

End:

6417

Strand:

-

>Scaffold18223_SINE-tRNA_54

TTCTTTTCTTTGATTATATTTTTGAATAATGAAATAAGTTCTGGGCCGAAGCCCATACATCTCCTCAAGCCCGAGACCAGAGTATGTTATATAGTCTCGTCCCAGGCGCTACTCGAACCGGCAAACTCTAATCTT

Capsella grandiflora (v1.1)

ID:

Scaffold18298_SINE-tRNA_55

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

3876  

End:

4042

Strand:

+

>Scaffold18298_SINE-tRNA_55

ACCAAGTGTTAATAGCTCGATTGGTTAAGATTTTTGATAAAATACCTAAAAATTATTAGTTCGAGTAGCGTTTGGGGCGAGACATTATAATATGTTCTAGTCTCGGATTTGAGGGAATATATGAGTTTTGATCTAGAATTTCTCGGTTATTACTTCAAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold18326_SINE-tRNA_56

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

92

Start:

1499  

End:

1590

Strand:

-

>Scaffold18326_SINE-tRNA_56

CATGTTATATGATCTTTTTCCAAGCGCTATTCGAACATGAACCTCTAGGCTATTGTCAGAGATCTTTACCAATTGAGCTAGTGACACTCGGT

Capsella grandiflora (v1.1)

ID:

Scaffold18329_SINE-tRNA_57

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

871  

End:

1031

Strand:

+

>Scaffold18329_SINE-tRNA_57

ACCAAATGCTAATATTTCAATTGGTAAAGATCTCTAGCAAAAGTTTAGAGGTCGCCGGTTCGAGTAGCGTTTGAGACGAGACCATATAACATGCTCTGGTTTCGGACTTAAAGGAATGTATAGGCTTTAGTCCAGAACCTCTTTGATTATTCAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1876_SINE-tRNA_58

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

107

Start:

55632  

End:

55738

Strand:

+

>Scaffold1876_SINE-tRNA_58

AAAGAAGTGTCGTTTGCGATAGATTTAACGTGGTCGGAATAAATTGTACGTAATAAAGTCGTTTTAGTAAATTTTTTCATAATTTTTATAAAATAATAAATCCAAAC

Capsella grandiflora (v1.1)

ID:

Scaffold1890_SINE-tRNA_59

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

97

Start:

11724  

End:

11820

Strand:

-

>Scaffold1890_SINE-tRNA_59

gatttATTAATTATTGCAAATTATGAGAATTGTTACAAAGATAATCTACCATGGGAAATTCCTTCCGACCCTATTAGATTCACTATTGACAATTCCT

Capsella grandiflora (v1.1)

ID:

Scaffold1890_SINE-tRNA_60

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

98

Start:

11853  

End:

11950

Strand:

-

>Scaffold1890_SINE-tRNA_60

TAATAATAAATCGCATTATTTGGGTCTCGAACTCCAGACCTCCTGATGTAGAAGCATTACTAAACCCTTGGTCAACAACATTGGACCGAAGAGACTTC