ID Class Order Superfamily Length Start End Strand View
Scaffold19084_SINE-tRNA_61 RetrotransposonsSINESINE-tRNA16949715139-
Scaffold1914_SINE-tRNA_62 RetrotransposonsSINESINE-tRNA88113750113837+
Scaffold19576_SINE-tRNA_63 RetrotransposonsSINESINE-tRNA1471316413310+
Scaffold19878_SINE-tRNA_64 RetrotransposonsSINESINE-tRNA16291309291-
Scaffold20383_SINE-tRNA_65 RetrotransposonsSINESINE-tRNA16311371299-
Scaffold20592_SINE-tRNA_66 RetrotransposonsSINESINE-tRNA16951175285-
Scaffold2087_SINE-tRNA_67 RetrotransposonsSINESINE-tRNA3332197422306-
Scaffold2104_SINE-tRNA_68 RetrotransposonsSINESINE-tRNA2996836068658+
Scaffold21102_SINE-tRNA_69 RetrotransposonsSINESINE-tRNA10131903290+
Scaffold2111_SINE-tRNA_70 RetrotransposonsSINESINE-tRNA15914461604+
Scaffold21206_SINE-tRNA_71 RetrotransposonsSINESINE-tRNA13412491382-
Scaffold21903_SINE-tRNA_72 RetrotransposonsSINESINE-tRNA153100252+
Scaffold2192_SINE-tRNA_73 RetrotransposonsSINESINE-tRNA1641727617439-
Scaffold2192_SINE-tRNA_74 RetrotransposonsSINESINE-tRNA1358759287726-
Scaffold22115_SINE-tRNA_75 RetrotransposonsSINESINE-tRNA88701788+
Scaffold22115_SINE-tRNA_76 RetrotransposonsSINESINE-tRNA3198531171+
Scaffold23087_SINE-tRNA_77 RetrotransposonsSINESINE-tRNA2711416814438-
Scaffold2310_SINE-tRNA_78 RetrotransposonsSINESINE-tRNA15065236672+
Scaffold2314_SINE-tRNA_79 RetrotransposonsSINESINE-tRNA167761927-
Scaffold2329_SINE-tRNA_80 RetrotransposonsSINESINE-tRNA31855375854-

< 4 5 6 7 8 > Total 15


Capsella grandiflora (v1.1)

ID:

Scaffold19084_SINE-tRNA_61

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

169

Start:

4971  

End:

5139

Strand:

-

>Scaffold19084_SINE-tRNA_61

TTTGTTTCATTTTTTTTAATATTCAAAGAGGTTCTGGGCCGAAAGCCCATACATCCCCTCAAGCCCAAGACCAGAGCATGTTATATGGTCTTGTCCCAAGCGCTATTCGAACCGGCGACCTCTAAGCATTTGCCAAAGATCTTTACCAATTGAGCTATTAACACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold1914_SINE-tRNA_62

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

88

Start:

113750  

End:

113837

Strand:

+

>Scaffold1914_SINE-tRNA_62

GAGGAAAAAGTGTAATCTATAGTGAATTTAATAGGGTCGGAGAGAATTGTCTATAGTATAATCGTCATTGTAACCGTTCTCATAATTT

Capsella grandiflora (v1.1)

ID:

Scaffold19576_SINE-tRNA_63

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

147

Start:

13164  

End:

13310

Strand:

+

>Scaffold19576_SINE-tRNA_63

GTTCAGTTGATTAAAATCTTTAGCAAAAGCTTAGAGGTCGCCGATTCGAATAGCGTTTGGGACGAAACCATATAACATGCTCTGGTTTTGGGCCTGAAAGAATGTATGAACTTCGCTCCAGACTTTTTTAATTATTCCAATAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold19878_SINE-tRNA_64

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

9130  

End:

9291

Strand:

-

>Scaffold19878_SINE-tRNA_64

tttttttttaagaactaagaagttctggactaaaacttatatgtttcctcaagcccgaaactagagcatgttatatgcatggtttggttccaaacgctatcgaatcgacaACTTCCAAGATTTTGCTTTAAATTTTTACCAATTGAACTATAAGCACTTAGT

Capsella grandiflora (v1.1)

ID:

Scaffold20383_SINE-tRNA_65

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

1137  

End:

1299

Strand:

-

>Scaffold20383_SINE-tRNA_65

TTTTTTTAAAAAAATAATCAAAAAAGTTGTGGATCAAAATCCATACATCCTTTTAGACCCGAGACCAGAACATGTTATATGGTCTCGTCTCAAATGCTACTCGAACCAACGACCTCTAAACTTTTGCCAGAAATCATTACCAGTTAAGCTATTAACACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold20592_SINE-tRNA_66

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

169

Start:

5117  

End:

5285

Strand:

-

>Scaffold20592_SINE-tRNA_66

TTCTTtattttttttttgaataatcaaagagattctgggccgaatcccatacatcccctgaggcctgaaaccaaaacATGTTATATGGTTTCGTCTCAAACGCTACTCGAACCGGCGACCTCTAAACTATTGCCAGAGATCTTTACAAATTGAGCTATTAGCACTTAGT

Capsella grandiflora (v1.1)

ID:

Scaffold2087_SINE-tRNA_67

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

333

Start:

21974  

End:

22306

Strand:

-

>Scaffold2087_SINE-tRNA_67

TTTAGATTTATTAATTATTGCAAATTATGAGAACTGTTACAGAGATAATTCTATCATGGCAGTTCCTTTCGACCCTATTAGATTCAAAATTGACAACACTCTTTTTTTAGCTTAAATACCCCCTTCTTCAAGCTGATCTTGGACACGTTCTTCTTCTTCAATAGCTTGAATCCCGCCGACCGGCTTTAATTGCGCATCACTGGAGATTTCCTGTAAATTTGTCTCCTTTAATCTGCATAATTGTTAATAAATCTCATTTTTTGGGACTCGAACCCCAGACCTCTTGGTGTAGAAGTATTACTAAAGCCTTAGTCAACATCACTAGTACAGGGG

Capsella grandiflora (v1.1)

ID:

Scaffold2104_SINE-tRNA_68

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

299

Start:

68360  

End:

68658

Strand:

+

>Scaffold2104_SINE-tRNA_68

gtggaagctccttagtctagtggttgacgaaaggttgtttaaagcttctacaccaagagttctggggttcgacgcctacgtaatgcgatttatttaatttgcagattaaggagataagcttataggaaatctataacaatacacaattagagccgttccgtgattctacgcatgaagaaggaggtgtcgtcaggaaaagatgtaatatgtggtgaatctaaaagggtcGGACAGAATTGTCGGTAGTAAAATCGTCATTGTAACAATTCTCATAATTTACAATAAATAATAAATCAAGA

Capsella grandiflora (v1.1)

ID:

Scaffold21102_SINE-tRNA_69

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

101

Start:

3190  

End:

3290

Strand:

+

>Scaffold21102_SINE-tRNA_69

ACCAAGTGCTAATAGCTCAATTGGTAAAGATCTCTGGCAAAAGCTAAGAGGTCGCCGGTTCGAGTAGCGTTTGGGACGAAACCATTTAACATGCTTTGGTT

Capsella grandiflora (v1.1)

ID:

Scaffold2111_SINE-tRNA_70

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

159

Start:

1446  

End:

1604

Strand:

+

>Scaffold2111_SINE-tRNA_70

ACCAAGTGTTAATAGATCAATTGGTAAGATCTCTGATAAAAGCTTAGAGGTCACTAGTTCAAGTAGCGCTTAGAAAGAGACCATATAACATGCTCTGGTTTCAGTTTGAGAGGATGTATGGGCTTCGGCCCAGAACGTCTTAGTTATTCAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold21206_SINE-tRNA_71

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

134

Start:

1249  

End:

1382

Strand:

-

>Scaffold21206_SINE-tRNA_71

TTTTTTTGAATAATCAAAGAggttctagaccAAGCCCATACATCCCTTCAAGCACGAAACCAGAGCATGTTTTATGGTTTCGTCTCAAGCGCTACTTGAACCGGTGACCTCTAAGCTTTTGCCAGTGATCTTTA

Capsella grandiflora (v1.1)

ID:

Scaffold21903_SINE-tRNA_72

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

153

Start:

100  

End:

252

Strand:

+

>Scaffold21903_SINE-tRNA_72

ACCATGTGTTAATACCTCAATTGGTaaagatctctggcaaaagcttagaggtcgccggttcgagtagcgcttgggacgagaccatataacatgctttggtctcgagggggtgtatgagtttcggcccagaacctctttgattattaaaaaaaa

Capsella grandiflora (v1.1)

ID:

Scaffold2192_SINE-tRNA_73

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

17276  

End:

17439

Strand:

-

>Scaffold2192_SINE-tRNA_73

tttttttttttttaaataatcaaagaagttctgggccgaaactcatacatcccctcaggtccgaaaccaaagcatgttatatggtttcgtccaagcgctactcgaaccggcgacctctaagcttttgccagagatctttatcaatTGAGCTATTAGCACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold2192_SINE-tRNA_74

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

135

Start:

87592  

End:

87726

Strand:

-

>Scaffold2192_SINE-tRNA_74

TTTTTCTTTTTTTTTTTAATAACTAAGACGTTTTAGACTTCGCAAAACCCATACATTAATTCTTTCAGACCCGAGACCAAAGCATATTATATGGTCTCGTCCCAAGTGCTACTCGAGCCGATGACCTCTAAACTT

Capsella grandiflora (v1.1)

ID:

Scaffold22115_SINE-tRNA_75

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

88

Start:

701  

End:

788

Strand:

+

>Scaffold22115_SINE-tRNA_75

TGGGACGAGACCGTATAACATGCGATTTCGGGCTTGAGGGGATGTATGAGTTTCGGCCTAGAACATCTTATTTATTAACAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold22115_SINE-tRNA_76

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

319

Start:

853  

End:

1171

Strand:

+

>Scaffold22115_SINE-tRNA_76

GTGGAAGCCCCTTTGATCCAGTGGTTGACCAAGAGTTTAGTAAAGCTTCTACACCAAAAGGTCTGGGGTTCAAATCCCAGATAATGCCATTTATTAATAATTATGCCAGATTAAACAAAGTTTATAGGAGATCTCCAGTGATGCGCAATTATTGGCGTTCGCCTTGATTGTAGCTATTGAAGAAGAAGAAAGTGTTCAAGATCAACTTGGAGAAGGAGGTGACCAAGATAAATATGGAGTGTTGTCAATAGTGAATCTAATTGGGGTTGGAAGGATATTTTTACTTTGGTTGATACAATTCTTTAGGTAAGAGCCCTCA

Capsella grandiflora (v1.1)

ID:

Scaffold23087_SINE-tRNA_77

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

271

Start:

14168  

End:

14438

Strand:

-

>Scaffold23087_SINE-tRNA_77

taaatttattaacagttgcttataagaattgttagaaagaTGATTCAGGACAATTCCTTCCTACCCTATTAGATTTTAGACGGAAGAAACGTCTGTTTCATGTGATTTTGGTACGATTCTTGTTGTAGAAAACAATATATTGGACAATTTCTTTTCCTTCGATACTCTAGAATTACGGCGAATAGTTCTAACTGCGCATCATTGGAAATTTCCTGTAAACTTGTATTCATTAGTCTCCAAATTATTAATAAATCGCATATCTGAGGCTTGA

Capsella grandiflora (v1.1)

ID:

Scaffold2310_SINE-tRNA_78

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

150

Start:

6523  

End:

6672

Strand:

+

>Scaffold2310_SINE-tRNA_78

TAAAGATCTCTAACAAATGCTTAGAGATAGTCGGTTCGAGTAGCGTTTGGGATGAGACTATACAATATATTTTGATCTCGGGTTTGAAGTGATATATGGATTTTGATCTAGAACTTCTAATTATTTATTAAAAGGAAAAAAGGAATAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold2314_SINE-tRNA_79

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

761  

End:

927

Strand:

-

>Scaffold2314_SINE-tRNA_79

tttttttttttttttttttgaataatcaaagagattctgggtcaaagcccatcccctcaggcccgaaaccaaagcatgttatatggtttcgtcctaagcgctactcgaaccggcgacctctaagcttctgccagagatctttaccaattgagatATTAGCACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold2329_SINE-tRNA_80

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

318

Start:

5537  

End:

5854

Strand:

-

>Scaffold2329_SINE-tRNA_80

TTTAAATTAATTAATTATTGGAAATTATGAAAATTGTTACATCGATGATTTTACCATGGAAAATTCCTTCCGCCCCTATTAGATTCACGATTGAGAACATTTCATCTTCAACCTAACGACACTTTTTTCTTCTTCAATACCTAGAATCATAGTGAATAGCTCTAATTACGCATCATTGAAGATCTCATATAAACTTGACTTTATTAATCTGCATAATTATTAATACATCGCGTATTATTTGGGACTCAAACCTCGGACTTCCTGGTGTAGAAACATTAGATAACCTTTGGTCAACCATAAGACCAAGAAGACTTCCAC