ID Class Order Superfamily Length Start End Strand View
Scaffold2342_SINE-tRNA_81 RetrotransposonsSINESINE-tRNA1772114121317+
Scaffold2356_SINE-tRNA_82 RetrotransposonsSINESINE-tRNA1142420224315-
Scaffold2381_SINE-tRNA_83 RetrotransposonsSINESINE-tRNA976529665392+
Scaffold2381_SINE-tRNA_84 RetrotransposonsSINESINE-tRNA1297257172699-
Scaffold2381_SINE-tRNA_85 RetrotransposonsSINESINE-tRNA1608623686395+
Scaffold2400_SINE-tRNA_86 RetrotransposonsSINESINE-tRNA17051585327-
Scaffold2406_SINE-tRNA_87 RetrotransposonsSINESINE-tRNA10529693073+
Scaffold244_SINE-tRNA_88 RetrotransposonsSINESINE-tRNA1611324613406-
Scaffold244_SINE-tRNA_89 RetrotransposonsSINESINE-tRNA1602065920818+
Scaffold244_SINE-tRNA_90 RetrotransposonsSINESINE-tRNA2583365433911-
Scaffold244_SINE-tRNA_91 RetrotransposonsSINESINE-tRNA1544582445977+
Scaffold244_SINE-tRNA_92 RetrotransposonsSINESINE-tRNA895976759855-
Scaffold24468_SINE-tRNA_93 RetrotransposonsSINESINE-tRNA10721692275-
Scaffold24531_SINE-tRNA_94 RetrotransposonsSINESINE-tRNA12311661288-
Scaffold2506_SINE-tRNA_95 RetrotransposonsSINESINE-tRNA23996749912+
Scaffold2584_SINE-tRNA_96 RetrotransposonsSINESINE-tRNA1604582045979+
Scaffold26190_SINE-tRNA_97 RetrotransposonsSINESINE-tRNA104888991-
Scaffold26205_SINE-tRNA_98 RetrotransposonsSINESINE-tRNA121706826+
Scaffold2629_SINE-tRNA_99 RetrotransposonsSINESINE-tRNA1644432944492-
Scaffold27291_SINE-tRNA_100 RetrotransposonsSINESINE-tRNA1499131061-

< 5 6 7 8 9 > Total 15


Capsella grandiflora (v1.1)

ID:

Scaffold2342_SINE-tRNA_81

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

177

Start:

21141  

End:

21317

Strand:

+

>Scaffold2342_SINE-tRNA_81

AGACAAGTTTACACGAGATCTACATCAATGCAATACCCTTTCGCCGTGATTATACACATGGAGAAAGAAATGTCGTCAGGAAATGAATGTAATATGGCGAATTTAATAGAGCCGGAGAGAATTGTTGGTAGTGAAATCGTCATTGTAACAATTCTCATAATTTGCAATAAATAACAA

Capsella grandiflora (v1.1)

ID:

Scaffold2356_SINE-tRNA_82

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

114

Start:

24202  

End:

24315

Strand:

-

>Scaffold2356_SINE-tRNA_82

tttactctttttattttattttaacaattaagagattttgggccgaaactcatatatcctctctcgcccgaaaccagagtatgttatatgatcttgtcttaagtgctattCGAA

Capsella grandiflora (v1.1)

ID:

Scaffold2381_SINE-tRNA_83

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

97

Start:

65296  

End:

65392

Strand:

+

>Scaffold2381_SINE-tRNA_83

TTGAAGTCGTCAATCATCAGCATGAAAAATGTAGTGTTGTCACTCGTGAATTTAATATAGTTGAAAGAAATTGCTGATAGTAAAATCGTCTATGCAA

Capsella grandiflora (v1.1)

ID:

Scaffold2381_SINE-tRNA_84

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

129

Start:

72571  

End:

72699

Strand:

-

>Scaffold2381_SINE-tRNA_84

TTTTTTAGTTTGAATAACAAAAAGGTTCTGGGCCGAAACCTATACAATCCTTTAAATCTGAGATGAGAACATATTATATGGTTTCGTCTCAAATGCTACTTAAACCAACAACTTCTAAGCTTTTTCTAG

Capsella grandiflora (v1.1)

ID:

Scaffold2381_SINE-tRNA_85

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

160

Start:

86236  

End:

86395

Strand:

+

>Scaffold2381_SINE-tRNA_85

ATCAAGTGCTAATAGCTCAATTGgtaaagatatcTGGCAAAAGTTTAGAGGTCGCTGGTTCGAGTAGCGCTTGAGACGAAACCATATAACATGCTTTGGTCTCGAGCCTGAGGGGATGTAAGGACTTCTGCCCAGAACTTCTTTGATTATTCAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold2400_SINE-tRNA_86

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

170

Start:

5158  

End:

5327

Strand:

-

>Scaffold2400_SINE-tRNA_86

TTTTTTTTTTTTTGAATAGTCATAGAGGTTTCTGGGTCGAAGCTCATACATCCTCTCAGGTCCGAGACCAAAGTATGTTATATAGTTTCATCACAAGCGCTTCTCGAATCGGTAACCTCTAAGCTTTTACCGGAAGTCTTTACCAATTGAGTTATATATTAGCACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold2406_SINE-tRNA_87

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

105

Start:

2969  

End:

3073

Strand:

+

>Scaffold2406_SINE-tRNA_87

AGAGACGTTTGATATGAGACCATATAACATATTTTGGTCTCGGTCTGAAAAGATGTATGAGTTTCGACACAGAACCTCTTTGATTATTCCAAAAAAAAACAAAGA

Capsella grandiflora (v1.1)

ID:

Scaffold244_SINE-tRNA_88

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

13246  

End:

13406

Strand:

-

>Scaffold244_SINE-tRNA_88

TTTTTTTTTTAATAATTAAAGAGGTTCTGCGCTAAAGCTCATACATTTCCTCAGACCCGAAACCAAAACATGATATATGGTTTTGTCCCAAGCGCTACTCGAACCGGCGACCTCTGAACTTTTGCTAGAGATCTTTACCAGTTGAGCTATTAGCACTTGAT

Capsella grandiflora (v1.1)

ID:

Scaffold244_SINE-tRNA_89

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

160

Start:

20659  

End:

20818

Strand:

+

>Scaffold244_SINE-tRNA_89

ACCAAGTGTTAATGTCTCATTTGGTAACGATCTTTGAAAAAAATCTAGAGATCGCTGGTTCGAATATCGCTTGAGACAAAACTATATAAACTGCTCCGGTCTTGGACTGAAGAAATGTATGAGGTTTAGCTTAGAACCTCTTAGTTATTCAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold244_SINE-tRNA_90

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

258

Start:

33654  

End:

33911

Strand:

-

>Scaffold244_SINE-tRNA_90

GACGATTCTACTACCAACAATTTTATCCGACCCTATTAGATTCACCACATATTACACATTTTTATGACGACACCTCCTTCTTCATTCGTAGAATCATGGTGAACGGCTCTAATTGTGCATTGTTATAGAATGCATGTAAGCTTGTTTCCTTAATCTGAAAATTAATAAATCGCATTACTTGGGTGTCGAACCCGATACATCTGGGTGTAGAAGTTTTAAACAGCCCTTCGTCAATCACTGGACCAAGGGAGCTTCCAC

Capsella grandiflora (v1.1)

ID:

Scaffold244_SINE-tRNA_91

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

154

Start:

45824  

End:

45977

Strand:

+

>Scaffold244_SINE-tRNA_91

AAGTGCTAATAGCTCAATTGGTGAAGATCTTTGGCAAAAACTTAGAGGTTGCCGGTTCGAATAACGTTTGGGATGAGACCATGCTTCGATTTCGGGGATAAGAGGATGTATGGAATTCGGCCCAGAACTTTTTTGATTATTGAGAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold244_SINE-tRNA_92

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

89

Start:

59767  

End:

59855

Strand:

-

>Scaffold244_SINE-tRNA_92

ACCAAAGCATGTTATATGGTCTTGTCCCAAGCGAACCGGCGACCTCTAAGCTTTTGCCAAAAATCTTTACCAATTGAGTTATCAGCACT

Capsella grandiflora (v1.1)

ID:

Scaffold24468_SINE-tRNA_93

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

107

Start:

2169  

End:

2275

Strand:

-

>Scaffold24468_SINE-tRNA_93

TCTTGATTTATTATTTATTGCAAATTATGAGAATTGTtacaatgacgattccactaccgacaatttgtccgactcTTTTAGATTCACCATAGATTAGACCCTCTCCT

Capsella grandiflora (v1.1)

ID:

Scaffold24531_SINE-tRNA_94

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

123

Start:

1166  

End:

1288

Strand:

-

>Scaffold24531_SINE-tRNA_94

TTTTTTTTTATAAATAATTAAGAGGTTCCCGATGAAAGCTCGTACATCCCCTCAAACCCGAAACTAGACCAGGTTATATGGTTTAGTCCCAAACGCCACTCAAAACCAATGATTTCTAGGCTT

Capsella grandiflora (v1.1)

ID:

Scaffold2506_SINE-tRNA_95

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

239

Start:

9674  

End:

9912

Strand:

+

>Scaffold2506_SINE-tRNA_95

GTGGAAGCTCCTTTAGTCTAGTGGTTGACCAAGAGTTGTTTAAAACTTTTACACCAAGAGATATGGGATTCGACGCCTAGATAGTGCGATTTATTAATTAGAGCCGTTCGCCGTGATTCTACACATGAAAAAAGGGTGTCGCCAGAAAAGGGTGTAATCTATGGTGAATCTAATAGGGTCGGAGAGAATTGTTTGTAATAGAATCGTCATTGTAACAATTCTTATAATTTGCAATACAT

Capsella grandiflora (v1.1)

ID:

Scaffold2584_SINE-tRNA_96

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

160

Start:

45820  

End:

45979

Strand:

+

>Scaffold2584_SINE-tRNA_96

ACCAAAAGCCAATAGTTTAATTAGTAAAGATCTCACGCAAAAGTCTAGTGATTACTGGTTCTAGTATCTCTTGGGATGAGAGCATATAATATGCTCCGTCGGGCCTTAAGGAAAGTATGGGATTAGGCTCAGAACCTCTTAGTTATTTGAAAGAAAGAGA

Capsella grandiflora (v1.1)

ID:

Scaffold26190_SINE-tRNA_97

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

104

Start:

888  

End:

991

Strand:

-

>Scaffold26190_SINE-tRNA_97

TTTATGTTTTTTTTTTTttgaataatcaaagaggttctgggccgaagcttatacatcttttcaggcccgaaaccaaagcatgttATATGGTTTCGTCCCGAGCG

Capsella grandiflora (v1.1)

ID:

Scaffold26205_SINE-tRNA_98

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

121

Start:

706  

End:

826

Strand:

+

>Scaffold26205_SINE-tRNA_98

TTAGAGGTCGCCGGTTCGAGTAGTGCTTGGGACGAAACCATATAACATGCTTTAATTTCGGGCCTGAGGAGATGTATAGACTTCGGCCCAGAACCTCTTTGATTATTCAAAAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold2629_SINE-tRNA_99

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

44329  

End:

44492

Strand:

-

>Scaffold2629_SINE-tRNA_99

TTTTTTTTTTttttgataactcaggagtgatcccaaaggctttctaggcccaaggactaatctcctggagccgggggaaactatgttaaatctcgaactcccgtggccaatgctattcgaacccaagtggcgggacttacctCCCTTTACCACTGGACCAAGGC

Capsella grandiflora (v1.1)

ID:

Scaffold27291_SINE-tRNA_100

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

149

Start:

913  

End:

1061

Strand:

-

>Scaffold27291_SINE-tRNA_100

CATCAAGACATATTACTCAATGCAAATTATAAAAACTGTTATAGAGACTATTTTACAAGAACAATTTATTATGCTCCTACTAGATCCACCAAAGACGCCATTTTTTTCTCTGCAACATTTCATTCTTCATGCTTATGGATACTTACAAT