ID Class Order Superfamily Length Start End Strand View
Scaffold1249_SINE-tRNA_21 RetrotransposonsSINESINE-tRNA1425585255993+
Scaffold12715_SINE-tRNA_22 RetrotransposonsSINESINE-tRNA14872317378-
Scaffold1346_SINE-tRNA_23 RetrotransposonsSINESINE-tRNA22768237049-
Scaffold13578_SINE-tRNA_24 RetrotransposonsSINESINE-tRNA1912183822028-
Scaffold13763_SINE-tRNA_25 RetrotransposonsSINESINE-tRNA861019810283+
Scaffold139_SINE-tRNA_26 RetrotransposonsSINESINE-tRNA29891629459+
Scaffold13923_SINE-tRNA_27 RetrotransposonsSINESINE-tRNA1631580115963-
Scaffold1410_SINE-tRNA_28 RetrotransposonsSINESINE-tRNA9839344031+
Scaffold14397_SINE-tRNA_29 RetrotransposonsSINESINE-tRNA165378542+
Scaffold15016_SINE-tRNA_30 RetrotransposonsSINESINE-tRNA1669991164-
Scaffold15087_SINE-tRNA_31 RetrotransposonsSINESINE-tRNA3461303013375-
Scaffold15171_SINE-tRNA_32 RetrotransposonsSINESINE-tRNA1641306413227-
Scaffold15171_SINE-tRNA_33 RetrotransposonsSINESINE-tRNA1481355113698-
Scaffold15187_SINE-tRNA_34 RetrotransposonsSINESINE-tRNA133809941+
Scaffold1536_SINE-tRNA_35 RetrotransposonsSINESINE-tRNA1692626626434+
Scaffold1536_SINE-tRNA_36 RetrotransposonsSINESINE-tRNA1525173251883-
Scaffold15569_SINE-tRNA_37 RetrotransposonsSINESINE-tRNA10666286733+
Scaffold15862_SINE-tRNA_38 RetrotransposonsSINESINE-tRNA282538819-
Scaffold16199_SINE-tRNA_39 RetrotransposonsSINESINE-tRNA10451385241+
Scaffold1670_SINE-tRNA_40 RetrotransposonsSINESINE-tRNA961738017475+

< 2 3 4 5 6 > Total 15


Capsella grandiflora (v1.1)

ID:

Scaffold1249_SINE-tRNA_21

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

142

Start:

55852  

End:

55993

Strand:

+

>Scaffold1249_SINE-tRNA_21

GTGGAAGCACTTTGGCTCAACGATTGATCAAAAGTTAATTAATGCTTCTACGCTATGAGGTCTAGGTTCGAGTCCCAAATAATGCGATTTATTAATATTTTGTAGATTAATGGAGACAAGTTTAAAAGAGGTCTCTAGTGAT

Capsella grandiflora (v1.1)

ID:

Scaffold12715_SINE-tRNA_22

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

148

Start:

7231  

End:

7378

Strand:

-

>Scaffold12715_SINE-tRNA_22

TAGAATCACGGCGAACGGCTCTAACTGCGCATTAGTGGAGATCTTATGTGTACTTGCCTCCATTAATCTACAACAGTATTAATACATCGTATTATATGGGGTTCAAACCCTAGACCTCCTAGTGTAGAAGCATTAATCAACCCTTAAT

Capsella grandiflora (v1.1)

ID:

Scaffold1346_SINE-tRNA_23

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

227

Start:

6823  

End:

7049

Strand:

-

>Scaffold1346_SINE-tRNA_23

TTTAAATTTATTAATTATTGCAGATTATGAAAATTGTTACAAAGATAGATCTACAATGGGCAAATTCTTCCGACCCTATTAGATCGATGCTCTCCATGTTGATCTTGAACACCTTTCTCTCCatgctacatttGGACACCTTCTTCTCCTTCAATAGCTAAAATCATGGTGAACAGCTATAATTGCGTATCACTGCATATCTCTTGTAAATTTATCTCTATTTATCT

Capsella grandiflora (v1.1)

ID:

Scaffold13578_SINE-tRNA_24

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

191

Start:

21838  

End:

22028

Strand:

-

>Scaffold13578_SINE-tRNA_24

tcttgatttattatttattgcaaattatgagaattgttacagtgacgattctactactgacaattctgtccgacccttttagattcaccacagattacaccttttgctgacgacatctccttctccatgcgtagaatcactgCGAACGGCTCTAATTGTGCATTGTTATAGATCTCCTGTAAACTTATCTC

Capsella grandiflora (v1.1)

ID:

Scaffold13763_SINE-tRNA_25

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

86

Start:

10198  

End:

10283

Strand:

+

>Scaffold13763_SINE-tRNA_25

CGAAACCATATAACatgttctggtcTCGGGTCTGAGGGGATGTATGGACTTCGGCCTAGAACCTCTTAGTTATTCGGAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold139_SINE-tRNA_26

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

298

Start:

9162  

End:

9459

Strand:

+

>Scaffold139_SINE-tRNA_26

GTGGAAGCTCTCTTGGTCCGGTGGTTGACCAAAGGTTGTTTAAAACTTCTACACCAAGAGATCGGGGTACGACGTCAAATAATACGATTTATTAATTTGCAGATTAAAGAGACAAGCTTACATGAGATCTACAACAATGCACAACTAGAGCCGCTCGCCGTGATTCTACGCATGGAGAAGGAGGTGTCGTCAGAAAATGATGTAATGTGTGGTGAATCTAATAGGGTTGGAGAGAATTGTCTGTAGTATAATCGTCATTGTAACAATTCTCATTATTTGCAATAATAATAAATCAAGA

Capsella grandiflora (v1.1)

ID:

Scaffold13923_SINE-tRNA_27

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

15801  

End:

15963

Strand:

-

>Scaffold13923_SINE-tRNA_27

TTTTTTTTttgaatatcaaagaggttctgggccgaagcccatacatcccccctcaggcccaaaaccagagcatgttatatggtttcatcccaagcgctaatcgaaccggcgacctctaagattttgccagagatctttaccaattgagctattagcacatggT

Capsella grandiflora (v1.1)

ID:

Scaffold1410_SINE-tRNA_28

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

98

Start:

3934  

End:

4031

Strand:

+

>Scaffold1410_SINE-tRNA_28

TCTATATATAGGGTCGAAAAAAAAATTCATGGTAAAATCATATATGTAACAGTTTTCAACTTTTCATAGTTTTCCATAACTAATAAATCCAAGACGAC

Capsella grandiflora (v1.1)

ID:

Scaffold14397_SINE-tRNA_29

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

165

Start:

378  

End:

542

Strand:

+

>Scaffold14397_SINE-tRNA_29

AAGTGCTAATAGCTCAACTAACAAATGGTAAAGATTTTTGGCAAAAATCTAAAAATCGATGGTTCGAGTAGTGCTTGGGACGAGACTTATAACATGCATTGATCTTGGGTCTGAGGAGACATATGGGCTTCGGTTCAGAACCTCTTAATTATTCAAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold15016_SINE-tRNA_30

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

166

Start:

999  

End:

1164

Strand:

-

>Scaffold15016_SINE-tRNA_30

TTTTTTTTTGTTTTTTTTTATAATCAAAGGTTCTGGGCCGAAATCCATATATTTCTGTAGACCCGAAATCAAAACATGTTATATGGTCTCGTTCCAGTTTTATTCGAACCGGCGACTTTTAAATTTTTGTCAATTTTTTTTACCAATTAAGTTATTAGCACTTAAT

Capsella grandiflora (v1.1)

ID:

Scaffold15087_SINE-tRNA_31

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

346

Start:

13030  

End:

13375

Strand:

-

>Scaffold15087_SINE-tRNA_31

tttaaatttaTTAATTATTGCAGATTATGAGAATCGCTACAAAGATAATCTACCATGGGAAATTCCTTCAGACCCTATATATTAGATTCATTATTACCATCACTTATTCGCTGATCTTGAACGCCTTCCTTCTCCATGCTGATCTTGGACACCATCTTCTCCTTCAAACTAGAATCACGGCTAATGGCTCTAATTGTGAATCACTGGAGATTTCTTGTAAACTTATCTCTATTAATCTGCATAAATATTAATAAATCGCGCTATCTTGGACTTGAATCCCAGACCTTATGGTGTAGAAGCATTACTAAATCCTTGGTCAACACCATTGGGCCAAGGGGGCTTCTAc

Capsella grandiflora (v1.1)

ID:

Scaffold15171_SINE-tRNA_32

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

13064  

End:

13227

Strand:

-

>Scaffold15171_SINE-tRNA_32

TTTTTTTTTTACTTCTTTTGTTTAATAACTAAGAGGTTTTAGGGTGAACTCACACATCTCATATCCGAGACCAGAGCATGTTATGTGGTATCGTCTCAGACGCTATTTAAACCGGCGATTAATTTTTTGCCGAAATTTTTTACCAGTTGAACTATTAACACTTG

Capsella grandiflora (v1.1)

ID:

Scaffold15171_SINE-tRNA_33

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

148

Start:

13551  

End:

13698

Strand:

-

>Scaffold15171_SINE-tRNA_33

TTTGTCTTCTTCTTTTAATAACTACGATGTTTTGAAACGAAACCCATACATCCCCGAAACAAAAGTATGTTATATGGTCTCAAGTGTAACTCAAACCTAGACTTCTAGATTTTTGCGAAAGATCTTTACTAATTGAGCTATTAATACT

Capsella grandiflora (v1.1)

ID:

Scaffold15187_SINE-tRNA_34

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

133

Start:

809  

End:

941

Strand:

+

>Scaffold15187_SINE-tRNA_34

AGTGCTAATAGCTCAATTAGTAAAGATTTCCGGCAAAAGCTTAGAGGTCGCCGGTTCGAGTAGCGCTTAACACAAAACCATATAACATGCTTTGGTTTCGGGTCTGATGGAATGTATAGGTTTCGGCCTGAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1536_SINE-tRNA_35

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

169

Start:

26266  

End:

26434

Strand:

+

>Scaffold1536_SINE-tRNA_35

ACCAAGAGCTAATAGCTTGATTAGTAAAAATATTTTGGCAAAATTCTAGAGGTATCCGGTTTAAATGACGTTTGGGACGAGATGATATAACTGTTCTGGTTTCAAGCTTGAGTGGATGTATGAGTTTTGGTCCAGGACAACCTCTTAATTATTCCAAAAAAAGAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1536_SINE-tRNA_36

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

152

Start:

51732  

End:

51883

Strand:

-

>Scaffold1536_SINE-tRNA_36

TTGTTGTTTTTCTTGAATAACTAAAAAGTTAGATCGAAACTTATATATTCTCTCGTCCCGAAAATGAAAGCAGAGTATATAGTTTTCGTCCCAAATATTATTCAAACCGGCGACTTATAAACTTTTGTAAAATATCTATACGAATTGAGCTA

Capsella grandiflora (v1.1)

ID:

Scaffold15569_SINE-tRNA_37

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

106

Start:

6628  

End:

6733

Strand:

+

>Scaffold15569_SINE-tRNA_37

GTAGCGCTTGGGACGAGACCATATAACATGCTTTGGTCTCGAGCCTGAAGGGATGTATAGGCTTCGGTCCAGAACTTCTTTAATTATTTAAAAAAATAAAATAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold15862_SINE-tRNA_38

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

282

Start:

538  

End:

819

Strand:

-

>Scaffold15862_SINE-tRNA_38

TCTTGAATTATTAATTGGTGCTAATTATGAGAACTGTTACAATGACGATTCCACTATAGACTATTCTCTTTTACCCTAATAGATTTAACACATATTACCCTTCTTCCTCGGATGGACGACACTTCCTTCTACATGTGTAGAATCACGGATAACGGCTCTCATTGTGTATCGTTGTAAATCTTCTGTAAACTTGTTTCCTTAATTTGCAAAATAATTAATAAACCGCATTTTCTAGGTATTAAAACCCCAAATTTATAGGTGTAGAAGCATTAATCAACCCTT

Capsella grandiflora (v1.1)

ID:

Scaffold16199_SINE-tRNA_39

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

104

Start:

5138  

End:

5241

Strand:

+

>Scaffold16199_SINE-tRNA_39

CGTTTGGAACGAAACCTTATAACATGTTTTGGTTTCGGGGCTGAGGGGATGTATGGACTTCGGCCCACAAACTCTTTGATTATTCAAAAAAAAAAATGACAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1670_SINE-tRNA_40

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

96

Start:

17380  

End:

17475

Strand:

+

>Scaffold1670_SINE-tRNA_40

TTCGAGTAGCGTTTGGGACGAAACCATATCACATCCTTTGGTTTCGGGCATGAGGAGATTTATTGGATTCGACCAAAAACCTCTTGATTATTAAAA