ID:

Scaffold10669_LTR-Copia_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

332

Start:

1926  

End:

2257

Strand:

-

>Scaffold10669_LTR-Copia_41

GCATAGAGACACAACAACACACTGATTTTCTCTTAGAACACGCCAAGACAACGCTTTATGTTTGTTCTTATTATTACAATTATCTTTTACAAGGATAATTCTATTTTGGCTATTACACAATCAATTCCTCTCAATAGATTTGTACTCAACTAAGAACCAAACCTAAGCCTACTCTCTTCTCTATCTAAACACACAACCGTGTAGATCTACGAGAATGAAAACCACACTCACCCTTCTAAGCCTTATTTTTGTGGCTTCGAAGTTTACAATTGTATATCAATATTCTAGGAGTGCTAATGAGGCTCGTGGCCAACCCTAGAATATTTATACTA

ID:

Scaffold10702_LTR-Copia_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

125

Start:

41860  

End:

41984

Strand:

-

>Scaffold10702_LTR-Copia_42

GACTTCGTCGAGACGCCTGCCAGTTGAAGATGAGTAGGAATGTGTTTGATCTATAGCTACCATTCCTCAATCTTAGTTATAACCTGACATTAATGTGTCTTGATTGTGAGTTGAGAGCTAGGATT

ID:

Scaffold10717_LTR-Copia_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

143

Start:

10662  

End:

10804

Strand:

-

>Scaffold10717_LTR-Copia_43

TCGTCATCTTCCTTTACTTGCTAATCTTCTTCTCTTCTTCTAGATTTCACCTGTCCATTTTTCTCTTCCTTGTTCTTCATCCCTTTCTTAATGATTGTTTTCTTTCTTCTTTGCATGTTCAATCGAAGAGGCTAATCCCAATA

ID:

Scaffold10733_LTR-Copia_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

285

Start:

8437  

End:

8721

Strand:

-

>Scaffold10733_LTR-Copia_44

GTAAGTGGTTTTGGTCTATCACGATTTATGCGTCCTATGATACAGTCGATCACGAACTAATACTCGAGCACACGAGTAGTAGACTCAAGCGAACTTAATTTACGATATACTCTCGAAACTACTAAAAACCTAATAAGTTACTTTGAATGAAAGCAAGAGAGAGGCGAGATTTTAGAACTGAGAATGCTTTTCTGTTTCAGAGTGTTCGAAATAATGAGAGGTTGCGCCTCTTTATGTTGTAGAAGTAGAAGGAGATAGATCTTCAAGAAAATATCCTCGACATAT

ID:

Scaffold10733_LTR-Copia_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

163

Start:

9000  

End:

9162

Strand:

-

>Scaffold10733_LTR-Copia_45

CCCAAGTGGTTCACTTTACACCCTTATTTCTCATTCAATTTAACTCAGTTTTGACATATGAGTATACCATTTTGTAGTACTCGTTTCCAACTTTCCATTGCACTAAAGACCTGACAATTTCGTTCAGCCGTATGGCCGGAATTTAGCTGGATTGTTGTCGGAA

ID:

Scaffold10733_LTR-Copia_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

377

Start:

9223  

End:

9599

Strand:

-

>Scaffold10733_LTR-Copia_46

ATCCCTCACATGAATAGAAATAAGTCTAAACTTTGAAGACTTAACTGACCCTATGGACTGACTCAACTAGCTAAACTATACAGACCTTTGAGTGTATATGCGAAAACTAACTATATATGAGTTGGTGACGTTTTTCAACTAAACTACTCATTGTTAAGACCTGTCGAGTTTACTCGGCCATACGGTGAACATGATGTCTTGAACTATCCGGAGTTTTATGTAAACTTAGACAGCAAGTATAACACAACTTCGTTTTCTCGTAGAACGAGGTTCTCTATTGTGTTCATATTGGTCGTAAACTTGCGTGGATAATCATGAGTGAACTTGGAGAGTATAGCCTCACATATTTTCCTAGAAACGGCCCCATTTCACATTCA

ID:

Scaffold10733_LTR-Copia_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

169

Start:

9890  

End:

10058

Strand:

+

>Scaffold10733_LTR-Copia_47

GGGAAAGAGACACATTTCTTTACTTGTTGTTGTTGTGTGTATTGTTTAACTATATAACACATTGTAACTCTGATGAAACATACGTTTATCAAACTCAGTAAGAAGTCAGTTTTCTGTTCTATCTCTGTTTTCTCTTTATAGAATTCATCTAAGAAAAACAGAACAATAA

ID:

Scaffold10742_LTR-Copia_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

170

Start:

30  

End:

199

Strand:

-

>Scaffold10742_LTR-Copia_48

CTTAATGTCTAAGAATTCTCTTGCTCTTTTGTGCTAACCTCTATAAAAGCTTAACACCCCTATTTATACATAATAGATCGTGGCCATACAAGCCTAATTTCCTATTCAAATTCTAATAGGAATTGCCAAATCACTTGTGAATTTCCTTTTCTTTTATGGAATAGGAAATT

ID:

Scaffold1076_LTR-Copia_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

223

Start:

7973  

End:

8195

Strand:

+

>Scaffold1076_LTR-Copia_49

AACCTTAAACCTAAAAGATCTCGGTGGTATTGTTTATCTCGGTACTGTTCATCGTAATACTGTTAATCGGCAACACTGTTCATCGTTGGTACTGTTCAACGTCCGTACTGTTTTTCATCGCGGTTCGTTGCAGAATCTTGAATTACCGAGGTCTTTAGCTCCCGGTCCAAATCCATTCAGAATTCAATAGGTgttcaagaggtaaacaccattaaccctaaaa

ID:

Scaffold1076_LTR-Copia_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

170

Start:

9045  

End:

9214

Strand:

+

>Scaffold1076_LTR-Copia_50

TCGGGAGATAATTACTTGCAATGGGCGTtggatgctaaGATCATCCTAAAATCAAAGGGGCTCGGTGAATGTATTGTCTATGGCAATGACGAGCCCGATATGAATAAATATAAGGCAATATTAATTATTCGCCATCACCTTGCAGAGAGTCTCAAGGATCAGTACTTGAC

ID:

Scaffold1076_LTR-Copia_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

361

Start:

10315  

End:

10675

Strand:

-

>Scaffold1076_LTR-Copia_51

TCTTAAACATGGCCGAGTTATATTTGTCCACGGATTTAAAATCCTGGATCCTGAGACTCATCCAATCATACATGGCCTTTGGTAGTAACACCGTACGTTGGTGATCATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATCTTAGCATCCAACACCCATTACAAATAATTATCTCCCGAGAGATTAAGGGCGGTAAAATCCAAATTATTTAGTTTCGACAT

ID:

Scaffold1076_LTR-Copia_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

204

Start:

11646  

End:

11849

Strand:

-

>Scaffold1076_LTR-Copia_52

TTTTAGCGTTCATGGTGTTTACCTCTTGAACacctattgaatTCTGAATGGATTTGGACCGGAAGCTAAAGATCTCGGAAACTCAAGCTTCTTCAATGAACCGCGATGAACAGTACCGACGATGAACAGTATTGACGATGAACAGTATCGAGATGAACAGTATCGAGATGAACAGTACCGCCAAGATCTTTTAGGTTTAAGGTT

ID:

Scaffold1076_LTR-Copia_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1657

Start:

11940  

End:

13596

Strand:

+

>Scaffold1076_LTR-Copia_53

AAATGCATACAACTAATTGCCAGACCATTGCTAATGAGATCAAAATTCCCGATCTCAGCTTGGGGACATGTTGTCTTACATGCAGCtgaataatttgCATCAGGCCATCTAGTGAACATACATATTCCCCAAAACGATTATTAACGGGTCATAAGCCAGAAATATCCGATCTTAAGATATTCGGATGTACCGTATATATATATATCAGTTGCTCCACCACTGAGAACTAAGATGGGTACTCAGAGGAGGATGGGGATATATGTTGGATatgaatctccCATAATAAATAAGTAGCTTGAGCCGACCACATTTGATTTATTCAAGGCCAAATACGCGGATTGTCATTTTGACGGATCCAATTACCCACTATGAGTGGGGGGgagataataataataagctggtaaaggaaattatatggaatcaatcatccttataatggcaagATCCTCGGACTATGAAATATGAATTAGACGTCCAAAGATAATGCAAAAGCCATCTAATTGCCAGATTCCCTTGACCCGAATAGAGTGACTAAGTCACATATACCAGCTATAAATGCACCTATAAGAATtgatgttcaggaaggacataatcaagttgctacaGAGTCTAAAGCCCGTATGAAACGAGGCAGACCAATAAGTTCCAAAGATAAAAACCATCGTAAATAAAGAAAGGTGATAAGAACGAATCCGAGGTTGAGAAACCGTGGTTACCCGAGACATAACCGAACCTCAGTTACCTAACAGTGAGGCTTGGGACGCTAAGCTTCAAGGTACTGATGAAGTTCATGATACTAATGAGATCGCGATCATTGATGTTATGTCCAGGATAAAATTGAACTGAAAAGATGTCGACGTCGACGATATAtttgcatacaAGGTAGCACTTGAAATGAAATTGATAAGCGATGATCTATAACCCACGTCCATAATGAGTGCACTCAATGATCAGATTGGATTAAATATGTGGAGTTGAAATCATAAAAGAAGAGGAATGTATAAGGAAACCTCTCGATATAAAGCCAGTTGGACATAAATGTGTCTTTGTGAGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGATATGCTCCCCTGTGGTGGATGCTAAGTCTGGCTATATAAAAGAAAAAGACTTGATTTGCGGCTAATGGATGTAATGCTTGCATATTTATATAAGTCCACTGGATAATATATGAGATTACCAGAGAGTATTGAGCTCaaagataagaaaggttctcgagaacatcactgcataaggctggacaaatcctttcatggacttagaataaatgggcgtatgaaagattataaaagatcccatcagtccatgtatattcataaagaggtttgcaaacaaaggatttgtaatcataagcagtgtatatgaaCCTCTGGGTAATCGACCAAACAGTTGAAAGACCTAGGCAATAAATAAGTCATGTTTGGAATTACACCTTGAGTACGTGAATAATGGAATCCTTGTGCATCAAATGCATACAATAAAGGGTACTCAAGGAGATTTAATAAGGATTAGGCCCGCCCATTGACCAGGCCCAATGGTGGtgagaagcctaAGATTGGATAGTGATCCATTCAGTCCA

ID:

Scaffold1076_LTR-Copia_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

733

Start:

13999  

End:

14731

Strand:

+

>Scaffold1076_LTR-Copia_54

ATGTATCTGGTGAGCCACACTAGGCCAGATATATGTTTTGCTGTGAATCTATTATCTAGAATTAGCTCATGTCCAACCCAAAGGCactggaacgggATTAAACATATTCTTCGATATCTATAAGGTACGATAGATTTGGGTTTATTTTATACTAACCATCCCAAGGAGGGATTGGTTGGTTTTGCTGATGCAGGTTATCTCTCGGATCCGCACAATGTTCGATCACAAACTAGCTATGTTTTCACGTACGGTGGAACAGCAATATCTTGGCGATCTCAAAAGTAAACGATCGCAGCAACATCGTCCAACCATTCTAAAATTTTGGCGATGCATGAGGCCAACCGTGAATGTGTTTGGTTGAGGTCCATGACTCAACATATTATGATCGATTgtgggatgaccgaaggaaaggcaacaccaacaataatgtatgaggacaatgctgCCTGCATAGCTCAGCTCAAAGATGGATACATAAAAGGAGATAGGACGAAGCACATTTTTGCCGAAGTTCTTCTTCACTCATGAATTACAGAAAGCCGGAGAGGTTCAagtcgaacaagttgaatcatgtgacaactcggcggatctattcaccaagtcgcttccaacctCAACGTTAAAGAAGCTTATAAAGCAAATTGGAATGCGCCGGTTGAAAGATATTTAGTGAGCTTCTAATAAGGGGGAGTAATACGTGTTGTACTCTTTTTCCTTCACCACGGTTTTATCC

ID:

Scaffold1076_LTR-Copia_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

519

Start:

19954  

End:

20472

Strand:

-

>Scaffold1076_LTR-Copia_55

ATCAATAAGAACATCACGTAACCATTGCAATTCACCAACTGTAAGCGACATGGCACGATACTCTGACTCCGCAGAGGACCGAGAGACGACATTTTGCTTCTTACTTTTCAATGAGATGGGCGAAGAACCAAGCGTAATAAACCAAGAACCCAATGAGCGACGAGTTAAACGACAGCCCGCATAGCCAGCATCGCACCATCCTTTGAGCTGTAAATCAGAATCAGACTTCAACAAAATTCCTTTCCCTGGTGTGCCTTTCAAGTAGCGAACAACACGCAAGGCACTCTCCCAATGTTCTTGTCTTGGTTCTTTCATGAACTGAGAGAGTATGTGAACCGAGTACGTTAGATCAGGGCGAGTGGCGAGCAAGTAAACTAAGCGTCCAACCAAACGCCGATAGCACTCCGGATCATCGAGTATACGACCAGTCGCCAAAGCAAGCGTATGTTGTTGTTCAATCGGAGTCATAGCCGGCTTTGAATCAAGAAGTCCTACTTCTGTTATAATATCAAGCGTGTA

ID:

Scaffold10840_LTR-Copia_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

901

Start:

116919  

End:

117819

Strand:

-

>Scaffold10840_LTR-Copia_56

ACCACGTCCTCGACTTTGCGTTGTTCTGCTTCTGGGTCGCTCCCCCCACCATTCCGGGTAACCGATAACAGCAAAACAACTGTCTGAGGAGTGACCACTCCGGTTGCAATGTTTGCACGAAGCCACTTGCTCATCACCACGAACAGAAACACCACCACGGCTTCTCTGCTGAACAGCGTACGCAGTGACTGCAACATCTTCAGTTTTGTgagagttgttcCTCAAGTCTTCTTCTTGACGAACAATATTGTACACCTCTTCCAGAGATTGAATTGGTACACGTGAGACCAAACTCGAGCGCACAGTTGCAAATGACTCATCAAGTCCTGACAAAAAATCATGAACTTTATCCTCTTCACGATCGTGTTCTTGCAACTCATTCAAATTGCAAACACATTTCCCACACTTGCAGATACGCAAAGGACGATGATTAGCCATACTATCCCAAATACGATTCAACTTCCCATAGTATGTCTCAATCGTAAGACCTTTCTGCTTGCAACAAGTAAGTTCAGCCTTGAGTTGTTGAATCCGAGGCCCATTGGTGACAGCAAAGCGTTTCTTCAAGAGATCCCACAAATCCTTGGCAACATCACGATGTGAGATGTTGGAACGCAACACCGGATCGATAGTCATTCGAATCCATGAGATCAACAAGGCCTGGATCGTCCACCAATCCTCCAAGTCGGGTGAACCTTCAGCAGGACGAGAGATGGAGCCATCAAGAAAGCCAAATTTTTTCCGTGAAGACAAGGCTGTTTTCATTCCACATGCCCATTCTTCATAGTTCATCCCTTTTAGCACGGGATGAGAGATCACGGCGCCTGGATTGTCAGCCGCGGTCAAGTCATAAGGTGAGATTGTGCGTCTCACCTCTGTCGTCGTCGTGGTCGGGTTCGGT

ID:

Scaffold10862_LTR-Copia_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

97

Start:

938  

End:

1034

Strand:

-

>Scaffold10862_LTR-Copia_57

TAGCTGGTGATTCTGACTCTGAGAGTGATATTAGTGATGAGGATGACGAAGAAGATGATGATGACGACGATGATGATGATGATGGGGATGAAGAGGA

ID:

Scaffold10869_LTR-Copia_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

110

Start:

10668  

End:

10777

Strand:

+

>Scaffold10869_LTR-Copia_58

TCGGAAGGAATTGCCCATGGTAGATATCTTTGTAACAATTCTCACAATTTGCAATAATTAATAAATTTAAAGACGATAAAAAAAAAGAATAATTAATAAATAGTCTATTT

ID:

Scaffold10869_LTR-Copia_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

116

Start:

20785  

End:

20900

Strand:

+

>Scaffold10869_LTR-Copia_59

TAATATTGTCGGAAGGAATTGCCCATGGTAGATTATCTTTGTAACAATTCTCACAATTTGCAATAATTAATAAATTTAAAGATGATAGAAAAAAAAAGAAAAGAATAATTATCATA

ID:

Scaffold10869_LTR-Copia_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

554

Start:

31934  

End:

32487

Strand:

-

>Scaffold10869_LTR-Copia_60

CACCAAACCGTGAGTCATCAAGACCCATGAAAAATTGATGAACTTTTTCATTATCTCTTTCTTGAACAATTGCAGTCATGATTGAACCATGAGGAAAAATTGCAGTGGCTTGATAATTCTTCAATTCATCCCAACGTTTCGACAACCGGCCAAAATAATCGATAACCTTTTGCCCGTTTTGTCGACACGAGGCGAGTTGAGATTTGATTTGATGAATTCGAACATTGTTGCTCACAGAGAAACGTTGTTTCAGTTCTTCCCATAGAAGATGAGAATTAGAAATAAACGTAACAGTTGACTTAACCTTTGGTTCGATGGAGGCTCGAAGCAACCAACAATCATAGAGTTTACTGTTTTCCAATTCTCAAAATCAGGATCAGTATTGGATGGCTCTGTGATCGTTCCATTGATGAAACCAGTCTTACGTTTGGCTTGTAGAGCATTCAACATCTCTTTAGCCCATTCATTGTAGTTCTCTCCATTCAACAAAACAGAGGTGATAACAGTACTGGGATTGTCGGAACTCGACAAGTTGTATGGTGAAACCACCGtgg