Capsella grandiflora (v1.1)
ID:
Scaffold10291_LTR-Copia_21Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
350Start:
3074End:
3423Strand:
+>Scaffold10291_LTR-Copia_21
AAGACAATGATGATTGTGTCGCTGAGATAAAAGGAGGTTATATCAAGAGTGATAGGACAAAAAATCTTCTTCTGAGATTTTCTCCTATACTCAAGAACTTAAAGAAAAGAAGGAAGTTGAAATCCAAAACATTCGTTTAAGCGACAATGTTGCAGAACTTCTTACAAAGTCACTTCCCTCCACGACATTTAAGAAGTATATTCAAAGTATCGGAAAGCATCGTGTACGAGACGTTTGAAGAAAGAAGATATATCTTTTCCAGGGGGAGCGTTACTGCACTATCTTTCCCTTAACATGGTTTTTACCCCGAACGGGTTTTTCCATGATAAGATTTTTAACGAGGCAGTATA
Capsella grandiflora (v1.1)
ID:
Scaffold10293_LTR-Copia_22Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
985Start:
1End:
985Strand:
+>Scaffold10293_LTR-Copia_22
GTAAGTAGATCTTTAAGACCAAACTCGATTGTAATGGCAATATTAAACGATATAAAGCTAGACTTGTAGCTAAAGGGTTTAATCAAAAAGAAGGTATCGACTATAATGAGACTTTTTCTCCCGTGTCAAGGAAAGATTCTCTCAGAATTATCATGgcattagtagctcagtatggtctcaaactacattaaatggatgtgaaaactgcctttcttaatggtgacttagaagAAGAAGTCTATATGCGTCAACCTGAAGGCTTCATAATCGAAGGTCAGGAAGACATGGTCTGCAAGTTAAAGAAATCAATTTATGGACTAAAACAAGCTTTGAGACAATGGTATCTAAAGTTTGATGAAACCattacgaaattCGGTTTTAAAGAAAACATTGTAGATCCATGTATATACCTCAAGATCAGTGGGAGTAAGTTCATAGTTTTGGTTTTGTATGTTGATGATATTTTACTGGCTAGTAGTGATCTTGGTctattacatgagactaagggttatctctctaggAATTTCGAAATGAAAGATATGGGTGAGGCATCCTACGTGATCGGTACTGAAATATTTCGTGATAGATCCCTTGGAGTTTTAGGGTTGTCTTAGAAAGCTTATATTGATAAAATTCTTGAGAGATTTGGCATGATGGCATGTTCTCATAGTATTGTTCCTCTGCATAAAGGTGACAAATTTATTCTTAAGCAATGTCCGCAGAATGAATTGGAACGTCTAGAAATGCAAAAATATCCTTATGCATCTTTGGTGGGAAGTTTGATGTATGCACATGTTTGCACCAGACCTGATATTAGCCATGTAGTTGGCATGCTGGGTAGATTTCAGAGTAACCCAGGACTCGCTCATTGGCAAGCTGCAAAGAAAGTATTAAGATACCTCAAAGGACCAAGAAACTACATGCTTACATACAGAAAATCAACACATCCACAGATGGTTGCATTTTCGGATTCAGATTATGGTGG
Capsella grandiflora (v1.1)
ID:
Scaffold10303_LTR-Copia_23Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
196Start:
30244End:
30439Strand:
+>Scaffold10303_LTR-Copia_23
CCAATTTTTTTAATTGATAAGTTTAATCTCTTTTACTTGCATTTTTATTTACAAAACTGAAAACCAAACAACAAATATTTTCCGCTTTAGCTAAGAACGAGTCTCGCAAGTATTTAGTATAACCTTGCTCCTTGTGATCGATCCCGCATATACTTTACTTTCGGTTAAGTTATCGGATTAAATACTCGAGTAATCA
Capsella grandiflora (v1.1)
ID:
Scaffold10335_LTR-Copia_24Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1319Start:
27End:
1345Strand:
+>Scaffold10335_LTR-Copia_24
TGGTATCAGAGCATTTCATCTTCGTCATCATGCTTCATTCATCTTCTTCCGCAAGCTCGTTTTCTTCGAATCTCTGATTGTTTCTTCTGATTTCTTCATATTCTTCTTCTCTGTTTCATTCTCTTCATTTTCATAGCTCAATTTCTCAAATCGGTTTTGTTTTACTTCCGATCGTGTTTCCTTCCGATCGCGTTTCTTCGATTTTATTTCAATCCGGTCCAAATTTGTCTTCGCGATGTCGAATCCATCAAATCCACCGAATCCGCCGTCTCACAGTTCCGATCCATATGAAAATCCGTTATATCTTCATGCTGCTGACAATTCCGGTGTGAATCTGGTGCTTGATAAGCTCACCGGTGAATCCAACTATCATACATGGCGTCGCTCGATCGTTCAAGCTCTAAATGCGAAAAACAAGCTTGGATTCATCTATGGCACCACTGTCAAACCTGCTCCGGCGCATACTGATTACGGATCGTGGACTCGTTGTAATGACATGGTATGTACTTGGATTACGAACTCTGTCTCGAAGGAAATTGGATCTGGTACAGTCTACTTTGATGATGCTCGTTTGCTGTGGTTGAATCTAGAAGGGAGATTTAAACAAAGTAATTTGTCCAAGATCTATAGTGTTCAGGATCAGTTGGATCGTTTACATCAAGGTTCTTTAGATCTAAGTGCTTACTACACTAAACTCACAACTCTATGGGAAGAGCTGAAGAATTTTGAGGAATTGCCTTCCTGTACGTGTGGTAATTGTACTTGTGGTTGTAACGATCGATGGATCCAGCTCTATGAGAAACGCAACATTGTTAGATTCTTGATGCGTTTAAATGAATCATTCACTCAAGCTCGTAGACAGATTATTATGATGGAACCACTTCCAGAGTTCACCAAGATTTACAACTTCATTGCTCAAGATGAACAACAAAGAGGTTTTAATTGTTCAATGCCTGCACCTGAACCTGTTCCAGAATCTGCAGTGTTTCAAGCTTCCATGAATTATCAGAAAAACAAGGGATATCAACAGGGGCGTCCTCGTCCTCTGTGTACTCATTGTGGGATGCTTGGTCACACTGTCACACGTTGTTATAAGCTCCATGGATATCCTCCAGGTTACAAAGTGCCATCTACTACATGTTACAATGCAGACAAGTCTAAAGGGCAATATAATCCACAGAATGGTGTTCACATGGTGTATTCTCAACCTCAAGAACAGATGTCCCATCAACAATCTTCAGATTACTATCCACAGGCTCAGTTACAAATGCCAGATAATCATCTCATCTCTTACAATGGCATTCCCTATGCACCTGTTG
Capsella grandiflora (v1.1)
ID:
Scaffold10335_LTR-Copia_25Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
3490Start:
1405End:
4894Strand:
+>Scaffold10335_LTR-Copia_25
TCTGTTGGAAACAATACTGGTGAATCTTCACAAGTCAATCATTCAGTCAATATGGTGAATTCTGGAAGGAACTTTTATGTGGGAAGTAACTCCAACAGTGGAGAACAGGTTAATCAGTTAGTTACTCAGTTGAACAGACAGCTTCAAGGTTCTCCGTATCAAGTCATACGTCCACCACCTGCCTCTCAACATCATGGTTCTATTTCAGCTCAAGGTACACAATCTGTGCCTTCTCACTATATTTCTGCTTTCGAACCAGGCCTTATTATTTCACCAAATGTCTGGATTCTTGATACTGGAGCTAGTTGTCATATTTGCAGTGATCTGCGTATGTTCTCTAATGTCTACCGAGTTGATCATGTCACAATAACACTCCCAAACAAAAACACAATTCCTATTCACACAGCTGGAACAGTTAAACTTAGTGATAGTCTCATACTTCATCATGTTTTCTATGTTCCTTCTTTTGCTTTTAATCTCATTAGTGTTAGTTCTTTGACAAAAACAAACAAAAACTTATCTGTGCATTTCTATCATGATGCTTGTTTTATTCAGGATCATACTCAGGCATGGATGATTGGTAAAGGGGATCAGTCAAATGATCTTTATCTCTTAAACCAACAGGACCTCCCTGATACACATCATGTTGCTTTTGTTGCTATTTCTCCTGAGCTTTGGCATCAGCGTTTAGGACATCCTTCTATTTCTAGAGTCCAAACAATGTCTTTCAATTTAAATCTTCCTCTGAAAATTTCAGATTTCCATTGTAAGATTTGTCATTTGTCAAAACAAAAACGTTTACCTTTTCCTTCAAATATTAATAAAAAGATTTCTGAGGAACCTTTCTCTTTGATTCATATTGATGTTTGGGGTCCTTTTCATATTACTTCTGTTCAAGGTTTTAGATATTTTCTTACAATTGTTGATGATTGCACTCGTATGACTTGGATTTATTTTTTGCGTTTAAAGAGTGATGTTTCTAAGGTGTTTTCAGAATTTATAAGTCTTGTTAAAAATCAATATGGTTTCAAAATCAAAAGCATACGATCTGATAATGCACCTGAATTGCAATTTACAGAATTACTTAGAAAACTTGGTATTTTTCACTATCATTCTTGTGCTTATACCCCCCAACAAAACTCAGTAGTGGAAAGAAAACATCAACATCTATTGAATGTGGCTAGATCTTTATATTTTCAATCTAATGTACCTCTTGCATACTGGCCTGAATGTGTTTCTACTGCTGCATTTTTGATTAATAGAACCCCATCCCCTGTTTTACAAGATAAAAGTCCTTTTGAAGTACTATATAAGAAAATTCCAGATTATTCTTTTCTTAGGGTCTTTGGTTGTCTTTGTTATGCATCTACACAACAACATGATAGGCATAAATTTACTGAGAGAGCTAGGCAATGTGTCTTCCTTGGTTATGAATCAGGTTTTAAAGGATATAAGGTTTTAGATATTGAATCTAATGTTACTTCTATTTTTCGTAATGTTGTCTTTCATGAAAATATATTCCCATTCTTTAAAAATTCAGTTAGTCCTACTTTGCCTTTCTTTGATGATTCTATGGTTCCTGTTTTACAAAATCAAAACTCACAGAATTTTCAAATTTATGATGATCTTAATGCTGAAAATAGTGAAGTTGGTCCTATCACTGAGGTAGACACTGTTCTAGATCACACACACACACCACCAAATACAGAAACTAGAACTGATCATACTCGGGATGACATGGGAAACACACTCAGACCACGCAGAGAGACACGAGCTCCAAGTTATCTAAAACAGTACCATTGCTCTAACATCACCACAGAGCCTTCTTCCTCTTCTTCTTTTCATGGTACTGCTCATCCTCTCTCTGCTTATTTGTCCTACGATAAACTCTCTCCTGAGTATCGTCTGTTCTGTTTTGCCATTATTTCTGAAAAAGAACCAAACACTTTCAAAGAGGCAGTGTTGTTGCAACATTGGCTTGATGCGATGAACATGGAATTGGATGCTCTTGTGAGTACATCTACCTGGATAATCTGTTCTTTACCTGAAGGAAAACATGCCATTGGCTGTAAATGGGTGTATAAGATCAAATATAAGTCTGATGGATCAATAGAAAGGTATAAGGCTCGTCTAGTGGCTAAAGGATACACACAACAAGGAGTTGATTACTTGGACACCTTTAGCCCTGTAGCCAAGCTAACAACAGTTAGGTTGCTGTTTGCTTTATCTGCAATTCACAACTGGAGCATCAACCAAATGGATGTGACAAATGCCTTTCTACATGGAGACTTAGAAGAAGAGATATATATGTCATTACCACAGGGATACACTCCAAGACATGGGGAGTCTTTACCTGAGAAACCAGTTTGCAGACTCATTAAATCTCTATATGGGTTAAAGCAAGCTTCTCGTCAATGGTTTCACAAGTTCTCAACTGTTTTGCTTCAAAATGGTTTCATTCAATCACCATTTGATCCAACACTATTTGTGAAATCAGATACTGACGGTTTTCTTGCTCTGCTGGTTTATGTGGATGACATAATGTTAGTGAGTAACAGGGATTCTGCAGTTGCCAAGACAAAAGATTTTCTTGCTAGAGAATTTAAACTAAAGGATTTGGGCAGGATGAGATATTTTTTGGGCTTGGAGATTGCTAGATCAAAAGAAGGAATCTCTGTTTCTCAACGGAAGTATGCATTGGAACTACTTGAAGAATTTGGTTTTCTTGGTTGCAGACCAGATCCTACGCCAATGGAGTTAGGTTTGAAGCTCAGTGATGAGAGTGGCGAGCTTCTTCCGGATCCTTCTGATTATAGAAGACTTATTGGCAAGCTGGTTTATTTAACAGTCACAAGACCTGACATTTGTTTTGCAGTAAACAAACTCAGTCAATATGTTAAAGCACCAAGAGAGCCTCATTTGATTGCTGCATACAGGATCTTAAGATATTTGAAGAATGATCCAGGTCAGGGAGTCTTTTACTCTACAAAATCGACTCTTACTCTTCGTGCCTTTGCAGATGCTGATTGGGGAAACTGTCCTGAAACAAGTAGATCCATCTCTGGATTCTGTGTCTTTCTTGGTGACTCTTTAATCTCCTGGAAATCCAAGAAACAGGACATTGTTAGTCGCAGTTCTGCAGAAGCCGAGTACAGAAGTATGGCCAATACCACTTGTGAGCTGCTCTGGATCAATTCTCTGCTTGAAGATTTGCATGTTCCTCTTGCTGATACAATTGTGATGTATTGTGACAATCAAGCTGCTCTGCATATTGCTAAGAATTCAGTATTCCACGAGCGCACCAAACATGTTGAAAGAGATTGCCATGTAGTGCGGGAAAGGGTGGCTTCTGGATTCATGAAAGTTCTTCACATTGGCACACAACATCAGCTCGCTGACATGCTTACCAAGCCTCTCACAGCCATTCAATACAATCATCTCTTATCCAAGATGGGATTACATCATCTGTATTCTCCATCTTGAGGGGGAG
Capsella grandiflora (v1.1)
ID:
Scaffold10335_LTR-Copia_26Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
130Start:
4904End:
5033Strand:
+>Scaffold10335_LTR-Copia_26
ATATATATCGGTACACTCGGTTAAGTATTTGATCCGGTTATgtcccggttatattgattgtatttaagcaaacctatggttgtattattcacttaatgaagcgtttatcaaaagttagttacatctgaaa
Capsella grandiflora (v1.1)
ID:
Scaffold1036_LTR-Copia_27Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
107Start:
151649End:
151755Strand:
+>Scaffold1036_LTR-Copia_27
TCCTTCTCATCGTCATCTCCATCAACTTCATCTTCATCATCAGTATCATCATCTGTATCATCATCAGTATCATCATCCGTATCAACATCATCACCATTCTGTCCATC
Capsella grandiflora (v1.1)
ID:
Scaffold10421_LTR-Copia_28Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
477Start:
29672End:
30148Strand:
->Scaffold10421_LTR-Copia_28
TGATTTCTTGTAGTATGACAATCAACCTTTGTTTTCTTAATTTCTTTCTATGAAAGTTAGGATCAGAAGTAATCAGACGGCTGATTTATGGTCACTATACAATTAATTCATAATGAACTAATTTGAATTTCCAAATCTTTAAGAAGTTGTTGTAACATGAGAAGTTCACATGTATGTACTAAGAGTTAAATTTTTATATTCAATCTAGTTACTAGCAATATGTTGTTTATTTAATTTTAAGAAATAAAAAATGTGTATCAAGATAGAGACAATAACCACTAATAATTTAGAATAAGACAAGTGTTTTAATCCACATCAGCAAAAGCTTTAATACATAATTTTGTATAATCATCATTGAAAATACTATGACCTTGATTATTTTTGAGATACCGTAAAACATGTTGAGCCGTTTGATAGTGTTCATTTGTTGCACATGATAAGAACTAACTCAAACTATTTACAATTCATGTAATATCA
Capsella grandiflora (v1.1)
ID:
Scaffold10495_LTR-Copia_29Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
172Start:
1676End:
1847Strand:
+>Scaffold10495_LTR-Copia_29
TTTGTTGCTTTTATTCGTAAGTCATCGATTCTTTGAAATATCTTGTAGCATAATGCTTTAATACATAATTTTTAAATCAGTTTATTTTTCATTTTAATTTACAAGTCTAAAAACCAAACAAACAACCTTTTTGCTTTAGCTAAGAATGAGTCTCACAAATCTTTAGAGTATC
Capsella grandiflora (v1.1)
ID:
Scaffold10504_LTR-Copia_30Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
630Start:
1125End:
1754Strand:
+>Scaffold10504_LTR-Copia_30
AAATTCAACCGATTCTTCCATTGTTTCCGCACATTCTGAGCTTGATTCTTCGATTTTTCTTCTCAATTGAATCTATTTTATTAGATTTGTATTCTTCACGGTCGTCTCCGCCATGAATCAATTATTTTTTTCCGATGGTGACTACTCGCAAAATGAATTGTTGCATGGTCAGAGCAGTTTCGTCACCTCGTCGATCGGTGAATCGTGATGATTCTTCTCCAGAGGTCTTGCCACCAAATCAACCGATTCATGCGGTTTCGTCAGCTCCTCAAGTTTTCATCCCTTCGATTGAGTCTCCCGATAACATTCATTCTCCGTTCTATCTCACAAACAACGACAATCCATGTATCTCTATCATTTTTGATGTTCTTGATGGTACGAATTACGATGATTGGAGTATCGCGATGAAAATAGCTTTAGATGCGAAAACAAAGTCGCGTTTATTGATAGATCCGTTTCACGACATGTTGAATATGATCGTATGTTTTGGATTTGGTCACGGTTTTAAAGTCTAGTGAAGTCTTGGCTTCTAAACTCAGTATCGAAGCAAATCTATAAAAGTATTCTTCGTTTTGATGATGCATCAGAGATTTGGAAAGATCTGTTGACTCGATTTCAGATCAACAATCT
Capsella grandiflora (v1.1)
ID:
Scaffold10504_LTR-Copia_31Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
151Start:
5625End:
5775Strand:
->Scaffold10504_LTR-Copia_31
GTATTTCGATGTATTCATCAAGATGATTACAAGAAGTATTTATAGATTGTACAGAGGAACATTCTAGGTTAAACGTATTAAAAGACATATCTACAAAAGAGGAAAGAGTATATTGTGATGATCAAGTGATGATATCTCAATATCTTTAACA
Capsella grandiflora (v1.1)
ID:
Scaffold10504_LTR-Copia_32Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1288Start:
5778End:
7065Strand:
->Scaffold10504_LTR-Copia_32
CCCCCTCAAGATGGAGGGGATTTGCTTCACTCCAATCTTGTTCCGAAGGTGAAGGAAGTGAGCTCTTGGAAGTGGTTTTGTAAGAGCATCCGCTAGTTGATCTCTTGTTTTGACATGACAGACCCAGAGAAGACCATTCTGAACTTGACCACGAATGAAGTGGTAGTCAATAGCGATGTGTTTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCGATAATCTGCTTCAGTTGACGATCTCGCAACGCCATTCTGTTTCTTAGCTGACCAAGATATCGGATTCCTACCAAGGTAGACAATGTAAGCGTTCGTCGAGATATAATCATGTGAGTCACCAGCCCAGTCAGCGTCAGAGAATGCATGAAGACTCAATGGATTCTTTGCTGAGAAGAAAACACCATGTGTTGTTGTCCCTGCAAGGTAGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGCTTCCTACCAGTTTTCTGTAAGGAGTTGGATCAGTGAGCGGTTGACCAGTCGTGAGAGTGATCTGTGGAGAATGTCGAGGATATACTTTCGCTGAGAGAGGTGCAAGCCATGTGTTGTGCGATGAGCTTCAATCCCCAGAAAATAATTGAGATCCTCAGCATCTTTAACTGAGAACCGAGCAGTGAGGAGAGCAAGGATTTGATTAATGGTGGATGTGTTGCTACCAGTAATGAGGATATCGTCCACATATACCAACAAGTAGACAAAGTCATTGTTGCGGCGAAGAATGAACAGCGACGTGTCCGACAATGAGTTTGTGAAGCCTATGGTGAGAAGGAAATTCTTCAGCTCAGTGTACCAGGCGCGTGGAGCCTGTTTCAAACCATATACAGCTTTGCGGAGTTTGCACACGAACGTCGGGTTGTCCGGATCAACGAACCCTGGTGGTTGTTCCATGTAGACTTCTTCCTTCAGTGTTCCTTGTAAGAAGGCATTATTGACATCGAGTTGTTTGATAGGCCATGCACGAGACACCGCAACATCAAGCCCTAGACGAATTGTCGTGGATTTGATCACGGGGCTAAATGTTTCTGTGTAGTCCCGACCGTGTTCTTGATTGTATCCCTTGGCCACGAGTCTCGTT
Capsella grandiflora (v1.1)
ID:
Scaffold10514_LTR-Copia_33Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
3779Start:
1End:
3779Strand:
->Scaffold10514_LTR-Copia_33
GGAACATGTATCACTTCTACTTGTTCATTTTCAACGCATTCACGTATAAAATGATACCTTCGATGAATGTGCTTGCTACGTCCATGGAAGACCGGATTTTTGGTGAGTGCGATAGCAGACTTGTTATCAACTTGTATTGTCACCTTCTCACATGTTACTCCAACAATTTCAGCAAAGAGATCTTGGAGCCAAAtagcttgcttcgctgcttctgTGGCAGCCATGAATTCAGCTTCACAAGATGATAAAGCAACAACTTGTTGTTTCTGTGAGCACCAAGTGATAGGACAGTCGTTGAAATAGAATACATGACCTGCTGTACTCCTTCCATCATCGATGTCAACACTGTGACTACTATCACTAAAGCCCACCAGCCCGGATTGCTTACCACGCTTGAAAAACAGACCATGACTAATGGTTCCTCGAAGGTACCTCAGTATTTGCTTCAATGCAACACCATGTGATTCTCTCGGTTCCTGCAAATACCTAGTCAAAATACCGACGGGATAAGAAAGGTCTGGCCTTGTATGCAGTAAGTACCTAAGACAACCAATTCTTCTTCTATATGTTCTTTCATCAATGTGTCTTGGATCACGTCCTTTAGAGAGTTCCAGTCCAGGCTCCATTGGTATGAGGACCGGGTTACAGTCACTTAAACCAGCTTCTTCTAGTATTCTTTTACCATAACTCTCTTGTTTTAACACAATCCCATTATTCTCTTGCAGTACTTCAATTCCGAGGTAGTAAGTAAGCTTCCCTAGATCACTCATCTCAAATTTTCCAGCCATTCCTTTCTTGAAAGCTTGTATCATCTCTAAACTGGAACCAGTCACAAGCAAATCATCAACATAGACCGCCACAATAAGAATATGCTCCTTCTCTTGCTTCTTGTACAAAGACGCTTCTTTAGAACATTTGATGAAACTTAGTTCACCAAGAATCTTGTTTAGCTTAATGTTCCATGCTCTAGGCGCTTGCTTGAGTCCATATAGCGCCTTGTGTAATTTATAAACCTTCTCCTCATTATCTTTAGCAACAAATCCCTCAGGTTGGGTCACATATACATCTTCTTTCAAGTCTCCATGGAGAAACGCTGTTTTGACATCTAAGTGATGAACTTCCCACCCATTTGATGCAGCCAAAGCAATAATCAATCGAATTGTCTCGATACGGGCTACTGGAGCGAACACCTCATCGAAGTCTATACCATGCCTTTGCACATAACCTTTCGCCACAAGCCTAGCTTTATACTTGCTGATGCTATTATCTGAGTTTCTCTTCACTTTAAAGACCCATTTCAACCCGATTGGTTTAACTCCAAGTGGCAGATCGACTAAGCTCCATGTCTTGTTCTTTGTAATCGACATGATCTCTTCATCACATGCTTCTCTCCATACTTTCTGTTTTGTtgcttcttgaaAATCCCATGGTTCATCATTAACTGCTAGCAAGAGTTGTTCTCCTTCAATTTCTGCCAAAAGAACATAATCGCTTAAGTATCCTGGCATCCTTGCTTGTCTTTGTGATTTTCTCAATGGTGGTATATCTTGAGATTGCTCCTCATCCTCCTCATCGTGTTCTTCCTCAACTGCATATTCGTCGTGATGGTCGTGATTATCACCATTGTCATCGTTTCCATCTTCACCTCTGTTTTCCTCTGTTTCGTCAATGATTTCATTTCTCCTAATTCCATTGTTTCCAAATTCAGAGAAGGTGAGCGTGAAGGTTCCTGATTCCATAGACCTGTTCTCTGAATTGTTCCATTTCCAGGATTTGAGTTCTTCAAAGAcgacatctctgctgaccaccactttccggtttgttggatctaagagacgataggctttggaaccgGGTTCCGTTCCAAGATGAACCAGCATCCTTGATCGATCATCCAATTTTCTGAGGTGTGGGGCTTCAGTTTTAGCATAGCATACACAGCCAAATACTCGCAAGTGATCAACCCTTGGTTTCTTCTTCTTGTAAACTTCATATGGGGTTTGATTATCTAAAGATCTCGTCCCAACTCGATTGATGATGTAGCTTGCATGCCTTACCGCTTCTCCCCACAAATAATTTGGCATGTTCATATGCTTTAAAATGCTTCTAGTCATCTCCAGCAATGTCCTATTACGTCTCTCGACAACACCGTTTTGTTGTGGTGTGTAGGGTGCGGTTAAATGCCTATTGATGCCCTCTTGTGCACAAAAATCTTGAAACTCTTGAGAGACAAACTCACCTCCTCTATCGGTCCGGAATGTTTTGATGGTAGCACCAGTTTCTTGCTCGACTAATGCTCTAAATCTTTTAAACTTCTCGAACGCTTCACTCTTCTCTTTCAACAAGATTGACCACATGTAACGAGAGTGATCATCGATCAATACGAAGACGTATCTCTTGTTTGCAGCTGTTGAGGGTGAGATTGGTCCGCACAAATCACCATGTATGAGCTCCAATACTTGTGATGCACGAAAAGACGTTGCTTTTGGAAAAACTTGTCTTGCTTGTTTTCCAAGTAAGCATGATGCACAAGTTTCCTTCTCTTTTGTTATACTTGTTATCCCAATAACTAGCTCTTTGTTCACCATTGTTTTGATGGtgtcaaggctaatatgtcctagccgagcatgccacaagcttgactcgtttgctgtaACTTGGTTTAGACTCTCCATGTTTGCAACTTCCAAGTTTACTTTATACAACCGGTTGAGTGATCGACTTGCTTTCAACAATAGGTTCCCATCTTTATCACATAGAGTGAGATAGTTTTCTCTCATTCTAATATCACAACCAGACTCAGTAGCTTGCCCTAAGCTTATGATATTGCTTCTAAGATCTGGTATGTAGTAGACATCATCAAGTACCTTTCTATCTCCTCCTTTTGTTAAGAACAAAATCGACCCTTTTCCCTTTATATCTATGCGAGAATCATCACCAAACCTTACTTTTCCCGTAACCATCGGATCAATCTTGTGAAACCAAGCATGATTTCCAGTCATGTGATTGCTAGCACCGTTGTCaaggtaccacaCTTTCTCGGAGCATTGTTCAAATTCTTGTGGTTTCACGTTCTTCTCGTTTAGGTACACAATCTCATGAACCATTAGGGACTCTGCTTCACGCGTATCGTCTTCCTCCTTCTCTTGGGTTTCTTGTGCCTTGATTAACTTCAGAAGACGATCGGGACAATCAGACGCATAATGTCCAAGTTTATCGCAACGATAGCATGTAACCTTAGAAGTGTCTCTTTGGTAGTTAGAGCGACCTCGTCCTCTTCCTCGTCCACGATACCAGCCTCGTCCTCTTCCTCCTCTTTGAGTATACTCTTGTGATTGCGAATCATCATTGGCATACATAAGCTTCCCTTGCTCGTCCGGTGACTCATCTTCTTCACGGATTCTCTCCTCATACGCCTTCAATCTCCCAACAATGTCTTCGAAAGTCGTTGTTTTGAGATCGAGTAGTTGTTCAAGCGAGGCAGTCATATGTACGAACTTCTTTCTTGGCAAACTCTTGAGGAACTTCTTAACTATTCTAACCTCATCAATAGTTTCTCCTAACAGGGCTGATTTCGTTGATATCTCTGAGAGCTTTCCCGCAAAGTCGTCAATGGTGTCTGTCTCCCTCATCTTCAACCTATCAAACTCGGTCATGAATGTTTAGATTACCCACTTGCAAAAGCATTGACTCTGGGATCGATTGAAACAAAAGAGCCCTCGCCAAATTGTTTTTCTCGATGTCGTCGGATCCAGGATCAATGGTGTCCCACACCTTAT
Capsella grandiflora (v1.1)
ID:
Scaffold10519_LTR-Copia_34Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
171Start:
11677End:
11847Strand:
->Scaffold10519_LTR-Copia_34
ATATAAAGGTTCTTGTAGAAGTGATAATCTTATTATTACATAGAGAAGAGTATATATACACCtagagatagctagggtattacaatcatagttaatgagaagatactactatacatatacagagacgtaattgacgtaatcacagatatgaggaTATCTCAATCATATCCT
Capsella grandiflora (v1.1)
ID:
Scaffold10519_LTR-Copia_35Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4490Start:
11852End:
16341Strand:
->Scaffold10519_LTR-Copia_35
CGCCCCCTCAAGATGGAGGGGGGCTTTGCTACTCCCATATTGCTTACAAAAGTCTGAAACGTGCTTCGTGGTAGTGGCTTGGTGAGAATATCAGCGAGCTGATCTTTGGTTGAGACATGTACCACACGTAACTCTACCGACTGCACTTGATTACGAATGAAATGATAGTCGAGAGCCACATGCTTCATTCGGGAGTGAAAAACGGGGTTAGCACACAAGTACGTTGCACCCACATTATCACAATAAATAACCGGAACTGCTGGAAGCCGAATACCAAGTTCACCCAATAACGAACATATCCAGGTTATTTCCGACGACGTGTTTGCAACTGACCTGTACTCGGCCTCTGTGGAAGAACGAGAAATGCTTTTCTGTTTCTTTGACGACCATGAGACCGGATGCGTGCCGAGATAAACAATGTAACCATTAGTAGACAAGTAGGTATCACTATCACCCGCCCAATCGGCATCAGAATAAGCATGTAGAGATAACGAACCACCACGGCGAAGAAAGATGCCATGATCAAACGTACCAGCCAAGTATCGGAGAACTCTTTTCACCGCACTCCAGGGATCGACCGTTGGGGCATGCATAAATTGGGAGAGCCGTTTCACCGCATACGACGTGTCAGGTCGTGTGAGCGCTAGATATTGAAGACTCCCTACAACTGCTCTATATTCAGTAGGATCAGAAAGTCTCGTACCCGTGTGAAGAGAGAGCTTTGGTGTGGTGGCCATTGGAGTAGTTACCCGTTTTGCACCTAACATCTTCGTCCTCTCTAAAAGATCAATTATATATTTTCGTTGACAAATGTGCATTCCTGAGGCACTACGCTTAACTTCAATACCCAAAAAATAATGCAAATCTTCATGTTCCTTCACCGAGAAACGCTTGGCTATGGCATCTAACGTGTGTTGTAGTAGCTTATTGTCATTGCCAGTGACTAGTATGTCATCCACATAAACAAGCATGTATACTATGGATTTTCCTGTCTTGAGAATAAAGAGAGAAGTATCAGCCACTGAATTGACAAAACCAAGTGTTAGAAGAAAATTACGCGACTCCATGTACCAAGCCCGAGGTGCTTGTTTGAGACCATATAAAGCTTTCCTCAAGCGACAGACGTGATTCGGACGATCCTTATCAACAAAACCCGGCGGTTGCATCATGTAGACTTCTTCTGTGAGAGTGCCTTGGAGGAAGGCATTGTTTACATCCAATTGACGAATTGGCCATGAAGAATCAACAGCGACTCCAAGAACAACACGAATAGTTGTGGCTTTGATGACAGGACTGAAGGTTTCTTCGTAATCTAAGCCATGTCTCTGATTATACCCCTTTGCAACAAGACGAGCTTTGTAACGATTGACTGAACCATCTGGATTATACTTGGTTGTAAATATCCACCGGCAGCCAATAATTCTAGTGTGTGGAGATGGAGGAGGAACAACATCCCATGTGTGATTGTGAATTTGTGCATTCATCTCAGAACAACAAGCTTGACGCCACCGTTCATCTTTAAGAGCTTGGTTAGCTGTTCGTGGTTCGGACGTGGTAACAGCCATGAGGTACTTGTTGTTTGGTCTGGAAACACCGGTCTTCGCACGAGTAGCCATCGGGTGATGATTATTGGGATTGACATTGATTTGAGGAACAGAACCTGTCGAGCTTGATGAAGACGAAGAAGAAGAATGAGGAACTGGGGATAGTGTTTGGTCACGTGGCTGGGTAGTGGATTGTGTTTGGGTTTCAGTAGAGGGCCTTTGTTCATGGGCCGAGTTTTGTGTTTGCATGGATAAAGTGTTTGATGTGTTTGAGTGGGCTGGTTCTGTTTGTGTTAATAGGCTAGGTTGCTGGGCCGTGGGTGTCAGCCCATTTTCAGTTGGAGCAGTGGGCTCAGAGGAGGGAGAAACAGAATTGGATTGAGAGGAAGAAGAAGACAATACCTGAGACGTGGCTGGAACTGGATTTGGTGGCGATGGAACCGGACTGTTCACGTGGTGAAAGATCGCACTTGGGGGTTCCGATAACGGCAGAGGTAGAGCTAAATGAGGTGACGACGATGCTTCTGTTGCATTGTCCATGGGTGACAACAATACATGTGTTGCAGCAAACGGGAACGACATCTCATCAAATTGAACATGTCGAGAGACATAAATTCGATTCGATGGAATATGCAGACATAAATAAGCACTCTGAGTTAATGAGTATCCTAAGATCACACATCGGAGAGAACGGTCTTGAAGTTTGTGACTGGTATACGGGCGTAACCATGGGAAACAAGTACATCCAAATATGCGTAACTTGGCATAGTTTGGAGACCGTTTAAACAGCTTATGAAACGGAGAGGCCATATTCAACACCGGTGTTGGAAGACGATTAATGAAATACACCGCGACAGCAAACGCATATGGCCAATAGCTTTTCGGTACGGATGCGTGAGAAAGTAGAGTGAGCCCTGTCTCAACAATGTGTATATGCTTGCGTTCGGAGATGCCATTATGTTCTGGAGTATGCAGAGGAGAGGTAAGGTGTGAGATACCATTTGCCACAAAGTAAGCTCTTAATGCCACAAACTCGCCGCCATTATCTGAATAAAAATTGCTGATCCGTGTTTGGAACTTATTTTCGACCAGAGTTTTGAAAGCAACGAAGGTTTCTCTTACTTGGGATTTTTGTTTAAGTGGGTAAAACCATGTATAACGAGTATAATGATCTATAAGAACAAGGTAATATTTGTAATTTTCAGTGGAAAGGATTGGGGAACTCCAAACATCAGAAAATATATACTCAAGAGGCCGAGAAGAAGTAATTGTGGATTGCGAGAAAGGAAGCTTATGGCTTTTATTGATTAAACAGTCATGACAAGACAAGAGTTTTTGTTTAGGGGAGATAACAGGAAGAGAAAAATTTGAAAGAACTGTGTTTAAAATAGAAGAAGAGGGGTGATCCAAACGAGAGTGCCAAGAAGAGAGAGTAGCTTTCAAACTAGGTGAAGCCATCATAGCTTTTATTGGTGGTGGTGTCTTCGGCCACTCATATAGCTCAGCTCTAGTTCTGCCGTGGAGTAACGGAACCCCCGTGTTGAGATCCTTCACCTGAAAGGAAGAGGGGAAAAATTCCACCGAAACTCGATTAGTATTACATAAACTATACACCGAGATCAAGTTATTACGAATATCGGGAACGTATAAAACATTATGTAAGTTTATCTGTCGAGTATTTGTGGAAAAAGAGACAGAACCGGTGTGTGTAATGGGAACGGTGGAACCATCAGCTACAACAACATCATCACCACCATGATAGGGCTGGTAAAGCGACAGATTGTGGAGATCCGAGGTGATATGATGAGTCGCCCCACTGTCCATGAACCATCCGTTTTGTGGATACGGTGAAGCAACGGCCATGTTCGCACGAGGGTTCCATGGTGCAAATGGAGTGGTCTGTGGTGGTGGAGCAGTTTGGTATTGTTGGAGCTGAGCACATCTCCTTGCACTGTGCCCTTGAACCCCACAAATCTGACACTTTCCCAAGTATGGTTTCTGTCCACGTGAATCTGATTTGTTGGAATGCTGCCAAGTGGACTGTGATGAGGAGGACCACGAGGCGTTGTCATTCTTGGACTTGTATTGACTACGCTGGTTTGTGGAATTGGTACGGTGTTGAATCACATTGGCCGTGATTGGGAGAGTCGGTGAGGCCATGACGGCTGCGGCTAGCAACCGGGCTTCATGATTGCGGAGACGTTCGTGTACATCAGTAATGGTTGGAGGAGAGTCTTTCCCTTCAACTTGATCAACAACGGGCTTGTATTCTTCTGGAAGCCCTTCCAAGATGACTTCTATTTGATCTTCATGATCAAGTGGTTTCCCCAAAATTGCAAGCTGGTCCATGCGAGTAGTGAGGCCTTGGACATAGTCATCAACAGATCTATCACCTTTGACCCACTGCTTGAGCTGAGCTTTGAGTTGATTGATGTGACCACGGCTGGGCTTCGCAAAGGTGGAGGCTAAGGTTTCCCAGATCTTCGCCGTGGTGGTAGCACGAGCCACCAAAGGTTGAACAGACGGCGAGATAGCTCCTAACACGGCACTGTAGAGAAGCTGGTCTTGTCGAGTCCAAAAGGTGAAGTCAGGATTGACCTGAACAACATTAGCGACAGTGATTGTGGCTGGAGGAGCAACAGTGGAACCATCGAGGTATCCACGGAGCGCATAACCAGCAAGGAGAGCGTTCACTTGAAGACTCCACATGAGATAATTGGTGGAGTTAAGCTTGGTAACACTTGATGTGTTAACACTGAACAACGTTGGAGTGGTTGTCACAATAGGATCAGCCACGGTGGGAGCAGAACTATTgatggcagagtTTGAGGCCATTGAAAAGAAGAGAGATAAACAAAAAAAGGAGAGAAGCGGAAGCTAGAGAAGAGAGACAGAGAGAAAAAAATAAAATTGCAGGTTTTAGAAACGTTTATTGCTCTGATACCA
Capsella grandiflora (v1.1)
ID:
Scaffold10519_LTR-Copia_36Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
181Start:
16329End:
16509Strand:
->Scaffold10519_LTR-Copia_36
TGCTCTGATACCATAAAGGTTATTGTAGAAGTGATAATCTTATTATTACATAGAGAAGAGTATATATACACCtagagatagctagggtattacaatcatagttaatgagaagatactactatacatatacagagaCGTAATTGACGTAATCACAGATATGAGAATATCTCAATCATATCCT
Capsella grandiflora (v1.1)
ID:
Scaffold10519_LTR-Copia_37Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
399Start:
20033End:
20431Strand:
+>Scaffold10519_LTR-Copia_37
CTAGATATTGAATCAAAAGTTACTTCTGTTACTCGTAATGTGGTCTTTCATGAAAATATATTTCCATTCATTAAAATTCAGTTACTCCTAGTTTACCTTTCTTTGATGATTCTATGATTCCTGTTTTACAAAATCAAAATAGTCAGAATTTTCAAATATATGATGATTTTAATATTTTCAACAATGAGGTTTGTCCTGTCACTGAGACTGATACTGTTCTAAAGCACACACAAGCACGCACCCAAAATCCATCAAACAATGATACTATAACTGATCAATCTCGGAGACTCGGACTGACATGGAAAACATGCCTAGACCACGCAGAGAGACACGTGCTCCTAGTTATCTTCAACAGTACCATTGCTCTATTGTTACAACAGAGCCTTCTTCTTCTTCTTC
Capsella grandiflora (v1.1)
ID:
Scaffold10519_LTR-Copia_38Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
162Start:
20445End:
20606Strand:
+>Scaffold10519_LTR-Copia_38
GATATTGTCACATGGTTCGTGAAAGCGTAGCTTCTGGATTCATGAAGGTTCTTCACAttggtacacaACATCAACTTGCAGACCTGTTAACTAAGCCAGTACTTACAGCTATTCACTTATTATCCAAGATGGGATTACATCACTTGTACTCTCCATCTTGAG
Capsella grandiflora (v1.1)
ID:
Scaffold1060_LTR-Copia_39Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
219Start:
3658End:
3876Strand:
->Scaffold1060_LTR-Copia_39
TGCTCCTAAACCAAGCCTGAACACGTTTCCAGTTGTTGATCGACGCGTGTCGTGATCACCAGCATAGTCGGCGTCACAATAGCCAACTATCTTACACTGTTCTCCTTTCTTATACAGAAGACCATAGTCAAGTCTTCCTTTCATGTACCTCAATATTCGTCGAAAGTGAGGTTTCTTTGGATTTTGCATGAATCGACTAACCACTCCAACTGCATATGC
Capsella grandiflora (v1.1)
ID:
Scaffold10656_LTR-Copia_40Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1258Start:
6End:
1263Strand:
+>Scaffold10656_LTR-Copia_40
AATGTAGTCGGGTGTAAGTGGTTGTACAAGAACAAGTTCAACTCCAATGGATCACACCAACGGTGCAAAGCGCGTCTCGTAGCTAAAGGCTACAATCAACAGTTGGGTCGCGATTACACAGCCACATTCAGCCCTGTTATCAAATCGACAACAATCCGCATTGTTCTTGACATCGCCGTGTCTAAAGGCTGGCCCATTCAGCAGCTAGATGTCAACAATGCATTCCTCCAGGGAACTCTAAAGGACGAAGTGTACATGGAGCAACCCCCGGGTTTTGTTGACTCTGACAAGCCAGACTTTGTCTGCCGTCTCAACAAGGCGGTTTATGGTCTCAAGCAAGCTCCTCTCGCTTGGTACACGGAGCTCAAGGCGTATCTCCTCACCATTGGCTTCACGAATTCTCTAGCAGACACGTCTCTGTTCATCCTTCACCGTGGCTCCGACTACATCTATCTTCTTGTCTATGTCGACGATATCCTCGTCACCGGTAACAATAAAAGCCTGATCGCTCACATACTCACCTCACTGGCTGACCGATTCTCAATCAAGGATGCTGAAGATTTGAACTACTTCTTGGGCATAGAAGCTCGTCGCACGATGAAAGGCTTGCATCTATCTCAACGGAAATATATCTTAGACCTTCTTCATCAACAGGACATGCTTGCGTGTAAACCGGTACACTCCCCAATGGCTTCGTCCCCAAAACTCACGCTTAATTCCGGCACACCACTCCCTGACCCGCGAGAATATCGAAAAGTCGTGGGTAGCCTCCAATATCTCAGCTTCACACGACCGGATATTGCTTACGCTGTGAATCGACTTTCGCAATTCATGCACAGTCCCACAACGGATCATTGGCAAGCTGCAAAGCGCATTCTGCGCTACCTTGCAGGCACCTCTTCTCATGGCCTTTTCTTCTCGGCAAGAAACCTACTCTCCCTTCATGCTTATTCGGATGCCGACTGGGCAGGTGATACGGATGATTACGTATCGACCAATGCTTACATATCCTATCTCGGCCAACACCCAGTCTCGTGGTCTGCGAAGAAACAGAATGGGGTCGCAAGATCTTCAACCGAGGCCGAATATCGAGCTGTTGCCAACACTGCCTCAGAAATCCGATGGATATGCAACATCCTCACCGAACTTGGAGTGCCTCTCCCGCATAAACCTGTGGTCTATTGCGACAATGTTGGTGCGATGTTCTTATGTGCAAACCCAGTGTTTCACTCTCGCATGAAACATATCGCCATTGACT