ID Class Order Superfamily Length Start End Strand View
Scaffold114_LTR-Copia_81 RetrotransposonsLTRLTR-Copia162113172113333+
Scaffold1150_LTR-Copia_82 RetrotransposonsLTRLTR-Copia993365133749-
Scaffold11531_LTR-Copia_83 RetrotransposonsLTRLTR-Copia1091221412322-
Scaffold1157_LTR-Copia_84 RetrotransposonsLTRLTR-Copia1031591616018+
Scaffold1157_LTR-Copia_85 RetrotransposonsLTRLTR-Copia89129010129098+
Scaffold11592_LTR-Copia_86 RetrotransposonsLTRLTR-Copia139633771+
Scaffold11592_LTR-Copia_87 RetrotransposonsLTRLTR-Copia9797721750+
Scaffold11605_LTR-Copia_88 RetrotransposonsLTRLTR-Copia1689241091-
Scaffold11801_LTR-Copia_89 RetrotransposonsLTRLTR-Copia157081577-
Scaffold11801_LTR-Copia_90 RetrotransposonsLTRLTR-Copia232418344157-
Scaffold1184_LTR-Copia_91 RetrotransposonsLTRLTR-Copia47773295105+
Scaffold11843_LTR-Copia_92 RetrotransposonsLTRLTR-Copia4996071105+
Scaffold11843_LTR-Copia_93 RetrotransposonsLTRLTR-Copia9012061295+
Scaffold1189_LTR-Copia_94 RetrotransposonsLTRLTR-Copia10040034102-
Scaffold11903_LTR-Copia_95 RetrotransposonsLTRLTR-Copia382296677-
Scaffold11930_LTR-Copia_96 RetrotransposonsLTRLTR-Copia24345734815-
Scaffold1194_LTR-Copia_97 RetrotransposonsLTRLTR-Copia833259132673+
Scaffold12009_LTR-Copia_98 RetrotransposonsLTRLTR-Copia129511295+
Scaffold12046_LTR-Copia_99 RetrotransposonsLTRLTR-Copia28870707357+
Scaffold12050_LTR-Copia_100 RetrotransposonsLTRLTR-Copia1846531898-

< 5 6 7 8 9 > Total 58


Capsella grandiflora (v1.1)

ID:

Scaffold114_LTR-Copia_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

162

Start:

113172  

End:

113333

Strand:

+

>Scaffold114_LTR-Copia_81

TACTTTTTTACTTTTATATAAATGATCGTATTCAATTGATGAAAAAGANNNNNNNNNNNNGAAATCTTTCTCTCGTCTCTATTTATTATTTAGTACCCCGATCCTTTTGCAGGTGCAAATTTTTTTGTTATTATTAATATTTATATACACCATAAATATAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1150_LTR-Copia_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

99

Start:

33651  

End:

33749

Strand:

-

>Scaffold1150_LTR-Copia_82

GAGGAAGACGAGGTAGATGATGATGATGTGGATGAGGTTGACGACAATGTAGATGATGATGATGATGATGTAGATGAGGTTGAGGACGATGATGATTCA

Capsella grandiflora (v1.1)

ID:

Scaffold11531_LTR-Copia_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

109

Start:

12214  

End:

12322

Strand:

-

>Scaffold11531_LTR-Copia_83

ATATATGTGCTTCAAAATACTTTGAGTCATCTCCAAGAGCGTTTGTTTACGTCTATCGACTGCTACGTTTGTGCTGAGGATATATATACTAGTTAAATACATCGCTATA

Capsella grandiflora (v1.1)

ID:

Scaffold1157_LTR-Copia_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

103

Start:

15916  

End:

16018

Strand:

+

>Scaffold1157_LTR-Copia_84

TACCATACAATCTTTGTCATCACATCCTCATCGTACTATCATTTTTATCATCATCATAGCATAATGATCACTATAGCATCATGCATCATCAAGATCATCTATA

Capsella grandiflora (v1.1)

ID:

Scaffold1157_LTR-Copia_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

89

Start:

129010  

End:

129098

Strand:

+

>Scaffold1157_LTR-Copia_85

TTCCGGTTACATATAATTGTGACAATATTAGAGATATTTAACAATGTGTGAATCCAATTTTTCACTCGCATATGAAACATGAGACCCTT

Capsella grandiflora (v1.1)

ID:

Scaffold11592_LTR-Copia_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

139

Start:

633  

End:

771

Strand:

+

>Scaffold11592_LTR-Copia_86

TATTGGGCTATAAAGCCTCTTAACATATATGACGGTTTATATAGGTTAATCAGGTCTAAGTACATGTGTATATAAAGCCATTCTATGGCCACAGTAATCAATAAGAAACCTCTTTTACAagttcatatgtttgttgaca

Capsella grandiflora (v1.1)

ID:

Scaffold11592_LTR-Copia_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

979

Start:

772  

End:

1750

Strand:

+

>Scaffold11592_LTR-Copia_87

tggtatcagagcatcaaacctaactactaaaaagttttttttttttgttcttgtggtctctatcttcggctaaagtgatcaaaatttttttttctattcctctctttttcccTATGGCTTCTGAATCAGAATATGAAAACTCTCCTCATCGTACTGAAACACGTTGAACGCTCTCACCATATGATCTTACATCTGGTGATAACCCTGGTATTCTCATTTCCAAACCCTTACTCAGTGGTCCTAACTATGATGAATGGTCCACACATTTGTGTTTGGCTTTGAAAGCAAGAAAGAAGTTTGGATTTGCAGATGGTTCTATTTCACAACCTGTTGAGAGTGACCCTGATTTCAAAGATTGGAGTGCCAACAATGCACTTGTCGTCTCATGGATAAAGCTCACCATTGACTACAGCATCTCCACCTTAATGTCTCACCTTGATGACTCTCATGAGCTTTGGACACATGTTTAAAAACGTGTTGGGGTTAAAAATGGCCAACGAGTTCAACGTCTTAAAACAGAGTTAGCTAACTGTCGTCAACAAGGATTGGCCATTGAAACATACTAAGGTAAGCTGCTCAAATTATGGAGAAGTCTTGCTGATTATCAACAAGCCAAAACAATGGAAGAAGTCCGAAAGGAAAGTGAGGAAGACAAACTCCATCAATTCCTCATGGGCCTCGATGATTCTGTTTTTGGAGCAGTCAATTTTGCTCTTCTTTCGCATACACCACTTCCTTCTCTTGAGGAAGCGTATATTACATTGAATCAAGACGAGAAGCCTAAGTCTTTAAGTCGCTTGACTGAAGCAAGGAGCGACGGTGTTAGCTTTGCTGTTCAGACCACTTCACGTCCTCAATCTTCCACGACAAATAGAGGTTCCTATGATAATCAAATTTGCTCTCACTGTGGGCGTCCTTGTCACATTACTGACAATTGTTTTAAATTAATTGGCTATCCTCTATGGCTTGAAGAAAAATT

Capsella grandiflora (v1.1)

ID:

Scaffold11605_LTR-Copia_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

168

Start:

924  

End:

1091

Strand:

-

>Scaffold11605_LTR-Copia_88

TGGACCAATCGGTCCGATGTTGGACCGATCAATTGTCTTGTTTCTAATCTGGTCCGGGCGAGTGGATCGATCGATCCAAGGTGGGGATCAATCGATCTTTTTGCTCCTGGAATGTGTCGTCGGTTTGGATCGATCAGTCTGACATTGGACCGATTGATCTTTGCTCTG

Capsella grandiflora (v1.1)

ID:

Scaffold11801_LTR-Copia_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1570

Start:

8  

End:

1577

Strand:

-

>Scaffold11801_LTR-Copia_89

AGGCTCGTTTTGGTAAGGACTTCGTAAAAATGTCAGCCAGTTGAAGAGTTCCTGGAATATGTTGTGTCTCAATTAAGCCCAAAGCAACCTGTTCGCGGATGTAATGATAATCAATGTCGAAGTGCTTTGATCGATTATGCAGGGCAGGATTGGTGCTGAGATATACTGCCGAGAGGTTATCACACTGAACCAAAGTCGTATGCAGCTGAGTAATGCCGAGATCTCGATGAAGAAATGAAAGCCATGTGAGTTCTTGAGCAACCGCAGTAAGTGCTCTATATTCAGCCTCTGTAGATGACTTGGACACTGTTGTTTGTCTTTTAGCGGACCATGATATTAAATTGGGACCAAGGAACACACAAAAACCAGTGGTGGAGCGACGAGTTGCTTTGCAGCCGGCATAATCACTGTCACTGTAAGCAAACAGTGATAAGTTCTGATTTTTCTGGATGCGAAGACCCATGTGGACTGTGCCCTTTATGTAGCGTAAAATTCGTTTCAAGAGGCCAAAATCTGCAGTTGTTGGGGCGTGCATCCTTTGACAGACGAAGTTGACAGCATATTGAATATCTGGTCGAGTAATGGTGAGATATTGAAGCTTCCCGGCTAAACTGCGAAAATATGTTGGTTCTGGAAATAATTCAGAGCTGAGGTTGTCTAGATCTTGCGGTAGAGGAGTTGGCATTGAGTTGCATTCTGACATTGCAGCTTGTTGGAGAATGTCAGATGCGTAAGAGGCTTGATGAAGGAACATGCCTGTTGAGTCTGATTTGATTTCAATGCCCAGAAAGTATTTTGGAAAACCGAGATCTTTCATGGAGAATCGCAAATTGAGTGAGTGTAGCAGAGCTTGAAGGAGAGATTGATCACTTCCAACCAGTAGGATATCATCGACATAGAGAAGTAATACAAGAGTGTTACCATTCTTATAGTATGTAAACAGAGAAGGATCAGATTTGCTGCAGGTGAACCCAAATTCTAGCAGATAGTTACTGAAGGTATCAAACCAGGCTCTAGGAGCTTGTTTAAGACCATAGAGAGCTTTGGTGAGACGACACACGTGGGATGGTTTTTCCGGATCAACAAACCCTGGTGGTTGACTCATAAAGACTGGTTCATTTAGTTCTCCGTGTAAGAAAGCATTTGAGACATCAAGTTGCTTCATGCTCCAGCCTTTTGCTGTAGCCACATCGAGAACAAGACGAATAGTTGCTGTTCTAACAACAGGGCTAAAGGATTCAAGGTAGTCTAACCCCTCTTCTTGATTAAAACCTTTTGCTACAAGTCGAGCTTTAAGCTTGTCAATCGTCCCATCTGGTTTAAACTTTGTTTTAAATACCCATTTGCAGCCCAAGATATTCATATCTTCTGTTGGTGGAACCAGGGACCATGTGTGGAGCATATTTATAGTGTTCATTTCATTCATAACAGCCTCGTTCCATCCTGGATGTTTGAGAGCAGTAACAACAGATTTTGGTTCTTCTGCAGTGTATTTTGAGGCAAGGAGAACATACCTCGAATTTGGCTTGTGAATCCCGGATTTAGCCCTTGTTATCATGGGGTGAGTATT

Capsella grandiflora (v1.1)

ID:

Scaffold11801_LTR-Copia_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2324

Start:

1834  

End:

4157

Strand:

-

>Scaffold11801_LTR-Copia_90

GATTGCCAGGCTTCGAGTAAAGAGGTCTCATATCGTGGAACAAGAGATTGGTACTGCTCTTTGTAAGGAAATTTATTTTCATCAAAGACGACATGTCTTGAGATATAAACTTTTCCAGTTGGAGGATAAAGGCATCTGTATCCCTTATACTGCGAATGGTACCCAAGAAACACACATTGCAGAGAACGTGGATCAAATTTATGAGTTGTGATTGGACGTAAACAAGGATAACAAGCTGAACCAAAAACCCGGAGCATCGAGTAGCTTGGTTTCTGTTTAGTTAGGACTTCAAAAGGGCTGCGATCTTTCAAGACAGAGGATGGAAGGAGATTACTGATGAAGCTAGCTGTGAAGAAGGCTTCTACCCAGAAGTGTAACGGAGCATGGCTGTGGTATAACATAGAAAGACCAAGCTCAATGATGTGACGATGCTTTCTCTCGGCAATACCGTTCTGTTGTGGGGTATAGGGACATGAAATCCTGTGTTGAATACCACTTTCTGCTAAATGTTTCTTCATAGCAATACTTGTAAATTCACCACCTCCATCACTTTGAAACTCTTTGATTTTTGTATTCAGTTGATTCTCTACCAGTCTTTGAAATATAATAAAGGTTGGGAAAAAATCAGACTTCGCTTTCAGAGGATAAAACCAAGAGAACCGAGTGAATTGATCCACAAAAACTGCATAGTATTTGAATCCTTGATTAGATACAATAGGTGAGGGACCCCATAGATCACAGTGTACTCTATCTAAGGGATGATCCACACTAGACTCTGAAGCAAAAAACTGTAATTTAGAACTTTTCCCCATCTGGCAAGGCTCACAAATAGGAGAAATTCTGCTCTTATTGAAATTTATCTCCTTGCTGATCTTGAGTTGATGAAGAACGTTTGAGTTTGCATGTCCTAGCCGGTGATGCCATATCTCCTCAGACGCTGCACATTGCCGGTTGGAATACAGAGCTACAAACTCTTGGTTCTTCAATACATATAGGCCATTACTTCTTAGACCCGTTGACACCACTTTCTGAGTTTTTAAATCAATAATGTAGACCTTATTAGCATCAAAGAACACTCCACACGGAAAATCATCACATAGCTTAGATACTGATAAGAGGGATTTGTGTATATCAGGACAGACCAAGACTTCTTTCAAAGGAATTGTACCTGCAGCAGAAGATATGGTGGCGGATCCAAGATGTGTTATAGGCAGATAAGCACCATCTCCAACCAAAACTGCATCATTGCCTCCATAAGTGACAGACGAGTGAAGGTTGTTGGCGTTAGGAGTAACATGAGCTGTTGCACCAGAATCGGTGACCCAATCATTGCCATCAGACACTTGTAGAGATGAGAAAGCTTGAGCAGGGTCAGGACTTTGGTAATTGTGATCAAACCGGTTGTAACATCTTGCAGCAGTATGACCGACACGTCCACAGATCTGACAGACGGGACGGTCTCCTGAAGTTTGTGGGGTTGATTGATGTTGAGAAAATCCCCTGCCCCGTGAAGAATAGCCACCGCGTCCTCTGTTTTGTCCTGATCTGCCCCGACCTCGATGCCCTCCACGAAAGTTGTTACCATAATCAGTTTTCTGGACTTGAAAGGCTAAGTGAGGTGTAACTGCTTCAGTGGTAGTATAAGAGTGAAGCTTAGTGTCAAAGCTTTCGACTTCAGAGACAACGTCACTGAAAGTTGGTGGTGAGAGCTTGCTTAGAGAACTCTGAATAACAGTCGTGATGGGGTCGTATTCACGACCTAAACCGTTAAGAAACCCAAAGATCTTCATAGATTCATCAATGGGTTTACCAATGGAACTCAAGGCATCACATATAGCAATAAACTCACGACAATAAGCAGCAAGAGACATTTCTTTTTTTTCCAGAACCCACAAATTACGACGAAGAGTAAACTCTCTAGCAATGCTACTCTTGTTGAAATTTTCAGCTAAAGAGACCCAGATTTCTCGAGAAGTTGTGAGATTGTGGACATACCCGAGAACTTCTTCTGACAGCGTGCCAAACAGCCAAGACCGGATGAGTTGGTCTGTGCAGAACCATGATTCATATTGAGGGTTGAGCGTTGAAGTGGTTGTGTCGCCGGATCCGGTGGAAGTGGAGCGTGGTGGAGCTGTGACGGCACCATTCACGAAACCGATGAGCTTTTGGCATGATAAGAGGGACTCAAACTGAGTTTTCCACAAAAGATAGTTGGTGTTATTAAGCTTGATCGTGACTGTACTAGAGACATGAATATTGTCAGGAAAGGGATAGAGATCAGCCATTGAAGCACCTGTTAAGGTTTTACAATAGCTCTGATACCA

Capsella grandiflora (v1.1)

ID:

Scaffold1184_LTR-Copia_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4777

Start:

329  

End:

5105

Strand:

+

>Scaffold1184_LTR-Copia_91

GTTGATCAGTATGATAATCCGTTTTATCTGAATAACAATGATCACGCAGGGTTGAATCTTGTTTCAGATAGGCTTAGCACAGCTTCTGATTTTAATTCTTGGAAGCGTTCTGTTATGATGGCTTTGAATGTTCGTAATAAGAttggttttatcaatggaacgattctaaaacctgctgaggatcatcgtgattatggagcttggtctcgttgcaatgatattgtatctacttggttaatgaactcagtttctaagaagataggacagagtttgcttttcataCCTACTGCTGAGGGCATATGGAAGAATATATTAGCTCGTTTTCAGCAGGAAGATGCTCCTAGGGTATTTGCTATAGAGCAGAAGTTGAGTAAGATTGAGCAGGGATCAATGGATATTTCGACTTATTACACAGAGTTGCAgactctatgggAAGAATATAAAAATTTTGTAGAAGTTCCTGTCTGCACTTGTGGTCGATGTGAATGTGATGCTGCAGTGAAATGGGAAAAACTTCAGCAGAGGAGTCGTGTCACAAAATTCCTTATGGGTCTTAATGAGAGTTATGATCAGACACGCAGACATATTTTGATGTTGAAACCTATCCCTTCTATGGAAGAGGCTTTCAATATTCTTACTCAAGATGAGAGACAGAAGATTATTAAACCCACTACAAGGATTGAGAATGCAGCTTTTCAAGCTTCTGCACCTGTAGATGGTGATATGGAAACTGCTTATATTGCAGCTTATAATACAGCTCGTGGAGCTCAGAAACCGATTTGTACTCACTGTGGGAAGGTGGGACATACGGTTCAGAAATGTTACAAACTCATTGGTTTTCCTCCTGGTTACAAGAATGTTGCTTCTGGTTATAATGTCAAGCCTCCGGCTCCCATTCCGAGTACACAGTTTCAGCCAAGGATACCAATGGCACAATCTCAACCAAGGATGACCTATTACCAACCAAGAGGACAGATGAGTCCCTATGAATCGATGCACAAGGCAAATGCTGTTGCTCAAGTTTACTCAGAGGTGCCTACAATGGTTAATGACTCTGGATCTTATACCCATCCTCAGTATATGCCTCAGCAATCTATGCCTTATGTTGCTTCAGATGGTTCTATCCAGAATTTGCAGAACCTATCATCTCAACAGATTCAACAATTAATACATCAATTCAACTCTCAAGTACAGGTTCCATCTCAGATACAAGATTCTGATGTGCAAATTGCAGCTGTTACTAGTGTTTCTAATAATGCAATGATTACTGAGAATGGTTTCATGGCCGAGTCTTCTTCTTCTGGTACTGTTTCTTTTCCTTCTACTAGTCTTAAGTATGAGAATAGTAATCTCACTTTTCAAAATCATACCCTTTCTTCCTTACAACAATTTTTACCAAAACATGCTTGGATAATAGATAGTGGAGCTTCTAGCCATGTGTGTTCAGACTTAACAATGTTTAAAGAATTAACATCAGTCTCTAATGTCACTGTTACACTTCCAAATGGTACTAGGGTTCCAATTACTCATACAGGCATCATCTGCATATCTTCTGTTTTAGTTTTGCATAATGTGCTACATGTACCGGATTTCAAGTTTAATTTGATAAGTGTTAGTTGTTTAGTTAAAACTTTGTCATGCTCAGCTCATTTTTTTCCTGATTGTTGTTTGATTCAGGAACGTTCTCAGGGCTTGATGATTGGGAGGGGTAAAATTTACAACAATCTTTACATTCTTGATACTGAGAAGCAATCCCTCTCACCATCACTTCCTGTGGTTTGTTCATTGTCTGGTTCTAAGTTGGATGATGGTGTTCTTTGGCATGAGCGTCTTGGGCATCCTTCACCAGCTGTTTTAAATAAACTTGTTAGTGTCATTCCTTCTCTGAAATCTATTTCTTCTACTATTTCTGAGTGTAAAATCTGCCCTTTAGCAAAACAAAAGAGATTAGCTTTTCTATCTCATAATAATCTAGCTTTACATCCGTTTGATTTAGTACATCTTGACATTTGGGGTCCTTTTAGTACTGAATCTGTAGAAGGTTTTAGGTATTTCTTTACTTTAGTTGATGATTGTACTCGTGTAACATGGGTTTATATGTTGAGAAATAAAAGTGATGTTTCAAAGATCTTTCCAGTTTTTCTTAAAATGATCACTACACAATATAATACAAATGTTAAGGCTATAAGATCTGATAATGCTCCTGAATTGGCTTTTACTAATCTTTTACAAGAATATGGAATGCTACACTATTTTTCATGTGCTTATACACCTCAACAGAATTCAGTAGTAGAAAGAAAACATCAACACTTGTTGAATGTGGCTAGATCATTACTATATCAATCAAACATACCTTTGCAATATTGGAGTGATTGTGTTAATACAGCAGTTTTCTTAATCAATAGATTACCTTCTCCTTTGTTAAATGATAAATCACCCTTTGAACTGTTGTTGAATAAGAAACCGGATTACTCTTTGTTAAAGAACTTTGGTTGTTTGTGTTTTGTGTCTACTCATTCACATGATAGACATAAGTTTTCACCTCGTGCTAGTCCTTCTGTTTTCTTAGGGTATCCATCTGGTTACAAAGGATATAAAATCTTGGATTTAGAATCGCATTCTATTTCAATTTCTAGGAATGTAACTTTTCATGAGAATTCGTTTCCTTTTAAAACTAGTGATTTGCTAGCTCAGTCTGTTGATCTGTTTCCAAATAGTATATTACCATTACCTGTACCATTACATTTTGTAGAAACTTTTCCAATTGATGATATTACACCTGCTGGAATTACTAATGCATATGCACCTGCACCTGCATCTTCTGTGCCTGCATCTTCTGTGCCTGCATCTTCTGTGCCTGCATCATTTAGTCATACATTACCTGCTGTACCATCAAGTAATCCTAGTACCATTACTAATAATACAGGGACACATGATACTGTTATTAATCCGATGAACATTGTTAGACCTAAACGTGCTACTAGAGCACCTAGTTATCTGACTGAGTATCATTGCTCTCTTGTCCCATTTATTTCTaatcttccacccacagataatacttctattcctatactaaatactacTATTACTACAGAAAGTATTAAACCTCATACTACACCTTATCCTATCTCATCTTATATCTCTTATGATAAACTCTCTCCCATATATAATTCATATATCTGTTCTTATAGCTTAGAAACAGAACCTAAGAATTTTAGCCAGGCCATGAAGTCAGAAAAATGGACAAAGGCTGCAAATGAAGAACTTCAAGCTTTAGAACAGAATCACACTTGGGATGTTGAGTCTTTACCAGATGGAAAGAATGTAGTAGGCTGTAAATGGGTGTTTACTATCAAGTATAACCCTGATGGTACTGTGGAAAGGTACAAAGCTAGGCTAGTAGCACAGGGGTTTACTCAACAAGAAGGGCTGGATTTTCTAGACACTTTTTCACCTGTTGCTAAACTAACCAGTGTGAGATATATTCTTGCTCTTGCTGCTTCAAAAGGCTGGAGTCTCACACAGATGGATGTTTCAAATGCTTTCTTACATGGAGATTTGGATGAAGAAATCTACATGAGCTTACCACAAGGATACACACCCAAACACAATGCTTTGCCTTCTAATCCGGTATGTCGTTTACGAAAATCTCTATATGGATTGAAGCAAGCATCACGCCAATGGTATAAACGTTTCTCATCAGTTCTATTGGGTGCAAATTACATACAATCGCATGCTGACAATACTCTGTTTGTCAAGATAGTTCCTGGTGCTTTCATTGCAGTTTTAGTATACGTTGATGACATTATGATAGCGAGTGATAATGAGACTGCAGTGGAGAGTTTGAAGACTTTGTTGCGATCAGAATTCAAGATAAAGGATTTAGGTCCAGCTCGTTTCTTTCTTGGTCTGGAAATAGCACGATCAAATGCAGGAATCTCAGTGTGTCAACGCAAATATACTCAGAACTTGCTGGAAGATACTGGTCTGTTGGGATGCAAGCCTAGTTCGATACCAATGGATCCAAATTTGCATTTGACCAAAGAAATGGGAACCTTATTGTCTAATCCAAAGACTTACAGAGAGCTGGTAGGAAGGATGCTATATTTGACTAATACAAGACCTGACATCACCTTTGCTGTTCATCAACTTAGTCAGTTCATCTCTGCTCCTACTGACATACACTTACAAGCTGCATATAAGGTTCTTCGATATCTAAAAGGTAATCCAGGACTTGgcttgatgttctctgctaattctgagatttgtatcaatggttttgctgatGCGGATTGGGCAAATTGCAAAGATACAAGGAGATCTGTTTCTGGTTATTGCATGTATCTTGGCACTTCACTCATTTCATGGAAGTCTAAGAAACAACAAGTTGCGAGTAGGAGCAGCACAGAATCAGAATATAGGAGTCTTGCTAATGCTACTTGTGAGATTATTTGGCTTCAACAACTCCTCAGAGATCTACACATTACTCCTGTTTGTTCAGCCAAATTGTTTTGTGACAACAAGTCAGCTCTTCATATAGCAATGAATCCAGTTTTCCATGAGAGGACTAAACACATAGAGATTGATTGCCATATCGTTCGTGATCAGATAAAAGCAGGGAAACTGAAGACATTACATGTTTCTTCAGGAAATCAACATGCAGACATACTCACCAAGCCTTTACACCCAGGTCCATTTTTCAACATCCTTCAACAAATGTCATTATCAAGTCTATATCTTCCAACAGCAGATGTTCTGAAGATAAAGACTTGAGGGG

Capsella grandiflora (v1.1)

ID:

Scaffold11843_LTR-Copia_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

499

Start:

607  

End:

1105

Strand:

+

>Scaffold11843_LTR-Copia_92

TCAAGATCTGTTGTaccaactggctgcctacaaccaatgatgggtatgtcactcctgacagagccaaattggtctacaaggtgatgcatcagaagccgtttgattttgggaggatggtctttaagctgatcatcaacatgggtttgacccctgtctCAAAGTTGTGCCTGCCGTTTCCCAGTTTGATTTATCAGCTGATCCAGTCATAGCACCTTGTGCATCCGGATGTATCTCAGCCAGTGCCAAAgtccaacaagAAGGGCAAAGCGAAGAGAGGACAGACTGCTGAGATTCCAGTATGCTCTTCAGATGATCGCAAGGCTTTGCGTCGTGCCATTCAGATCATGCAGCGTATCATCGATGCAGGTAAGTGTTTCTTCTTTCAatctgtcattcctgtgatccataagttacttgttttttacttagttgtgcaaacaagcagggggagatgattctgattctgatgatcataggactggttgatttgtgggggagc

Capsella grandiflora (v1.1)

ID:

Scaffold11843_LTR-Copia_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

90

Start:

1206  

End:

1295

Strand:

+

>Scaffold11843_LTR-Copia_93

TTGGGTCTGTAATAAGTTTAAACATGGCATTTTAGGATTTCTATTTTGGGATTTGTGCTAGTTATATTGCTAGATGTTTTCCTTGTTGCT

Capsella grandiflora (v1.1)

ID:

Scaffold1189_LTR-Copia_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

100

Start:

4003  

End:

4102

Strand:

-

>Scaffold1189_LTR-Copia_94

GTTTTTTTTTTGAGTTTACTATAAGACTACAGTAATTAAATAAACACACCTTAAAGATCAGATCTCCTATTGAGCAAGCAACTGTATCTTGAGGAATTAT

Capsella grandiflora (v1.1)

ID:

Scaffold11903_LTR-Copia_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

382

Start:

296  

End:

677

Strand:

-

>Scaffold11903_LTR-Copia_95

TGTTGAAGAATTTGAGAAGTAAAAGGTTGCAAACTAAAAGAATACACACCCAAATTGTTAACCGAGTTCACTGCCTCTAACCGCGGGAAAAATCTTGCTCCCAAATCCACTATATGAAAGAGATTACACTTACACACACCACACTAATCACTTGTGATGTTATTTGTATTACAGGTTCTCTCTCactcaaggatctaaaattaacaagaagaaacaacaCTCTCTCTTTTAGTGTCTTCTCAGCTTCCTCTCTTCTACCCTCTTGATCCAACGTGACAGCAAATATATAGGTGAGTGGGCTTTAGAACATTTTCATATTGTCTCTCCATGTCCATTTTCATCAGGTCCATTAAGGCCCAATAATTTTGTTTTGTCAAACCCA

Capsella grandiflora (v1.1)

ID:

Scaffold11930_LTR-Copia_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

243

Start:

4573  

End:

4815

Strand:

-

>Scaffold11930_LTR-Copia_96

AGAGAAGAGTAACAAATGGTTGTTTGTAAACAAAACAACACACATAAATTGGTAACCGAGTTCACGGCCTCTAACTGCTACGTCACGGGGGAGAACTCTTGTTCCCAAACTCTACTATATGAAGGAAGTTACACCACTAAGATTTTACAGGTTCTCTTACACGGATCTAGACTCAAGATACAACAACAAAGCTTTCTAAAGAACACTCTTTTGTTTCCCTCTCTAGAACTCTCTATTTCCTGT

Capsella grandiflora (v1.1)

ID:

Scaffold1194_LTR-Copia_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

83

Start:

32591  

End:

32673

Strand:

+

>Scaffold1194_LTR-Copia_97

TGTTTTTTTATTTTTTATTTTTCCTTTTTTGTTTCCCCCCGAAGAGAAGAAAAACAAACAAACAAAGAGAGAGAGAGAGAGAG

Capsella grandiflora (v1.1)

ID:

Scaffold12009_LTR-Copia_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1295

Start:

1  

End:

1295

Strand:

+

>Scaffold12009_LTR-Copia_98

TTGCTCCAGTGGCCAGAATTGAAACAATCCGGTTTATTATTGCATTAGCGGCATCAAACGGCTGGGAAGTACATCACTTGGATGTAAAGACTGCTTTTCTTCATGGAGACCTAAAAGAGGATGTCTATGTTAAGCAACCAGAGGGATTTGTGATCAGAGACAAAGAGGAGAAGGTCTACAAATTGCATAAAGCCTTATATGGACTAAAGCAAGCACCTAGGGCATGGAACACTAAGTTGAATAAAATTCTTAGTGAACTGAAATTTGAAAAATGTTCCAAAGAGCCTTCTCTATACAAGAAAAAGGAGCTAAATCATCTTCTAATTGTTGCAGTTTATGTTGACGATTTGCTTGTTACAGGTTCCAACTTGGCTATGATACTTGACTTCAAAGAAAAGATGGCTGGAAAATTTGAAATGAGTGACTTGGGAAAACTTGCTTACTACCTCGGCATAGAAGTTCTTCAAGGAGAAAATGAGATTATCTTAAAACAAGAAAGATATGCGATTAAAATAATGGAAGAAGAAGGAATGAGAGAATGCAACCCAGTTCTTATACCAATGGAATCAAATCTTGAGCTCTCTAAAGGACGAGATCCGAAACGTATCGATGAACAAAGCTTTAGAAGAAAGATTGGTTGCTTGAGATACTTACTTCATACTCGACCTGATCTCTCTTATCCGGTGGGAATTCTAAGTCGATATTTGCAAGAGCCAAGAGAACAACATGGAGCTGCACTCAAACAAATCCTGAGGTATTTACAAGGCACTCTTAACTATGGTCTCTGTTTTCGTCGTGGAGATCAATCTGGCTTAGTAGGGTACAGTGATAGCAGTCATAGTGTGGATGTGGATGATGGAAGAAGTACAGCTGGTCATGTTTTCTATTTCAATGAGTGTCCGATTACTTGAAATTCTCACAAACAGCAGGTCGTGGCACTTTCTTCTTGTGAAGCAGAATTCATGGCTGCTACAGAAGCTGCTAAGCAAGCCATTTGGTTAAAGGATCTCTTCGCTGAAATCATTGATAAATAATGTGAGAAGGTGACAATTCAAGTTGACAACAAATCCGCTATTGCACTTACTAAAAATCCAGTGTTTCATGGGCGTAGCAAGCATATTCATCGAAGGTATCATTTTATACGTGAATGCGTTGAAAATGAACAAGTGGAGGTGATACATGTTCCGGGAGTGGAACAAAGAGCAGACATCTTAACTAAAGCACTTGAGAAGAACAAGTTCAAGGTAATGAGAGATCTCATTGGAGTCCATAGCTTGTCAAAGAAAGACTTCAAG

Capsella grandiflora (v1.1)

ID:

Scaffold12046_LTR-Copia_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

288

Start:

7070  

End:

7357

Strand:

+

>Scaffold12046_LTR-Copia_99

TGTTAGTTTTATAATTGAGTTTGGTCATATTATTTAGTATAAATTAGTGTATATACTAAGTCAAGAGGTATGTATGTAAGGGTAGTGAATGACTTGTCAACTAAGACACAACCATTAATAACAGTTAATTACACTTACGACCGTAGGACATGTATATAAGTATATTCGTGTGGCTGTAACACATTACAGTGTTAGTTTCATAAAAAAAGTTTGGTTCTTGTCTTCTTTACAAGAGAAGAGACAAAAGGTCTCTTACTATGTTTTTTTCATTCTCTCAATATTCCAACA

Capsella grandiflora (v1.1)

ID:

Scaffold12050_LTR-Copia_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1846

Start:

53  

End:

1898

Strand:

-

>Scaffold12050_LTR-Copia_100

CCCCCCTCAAACCGAACGATCTTTAGGAGTATAAAGGTTTGAAATCGACATACGACCAAGTAGATTATGAAAAGGACCCGGCTGTAATGGTTTGGTGAGTATATCCGCCAGTTGATTGCAAGAAGACACATGGAAGAGCTTCAAGAacccattcttgatctgatcccttgtcgtatgacaatCAATTTCCACATGCTTTGTTCTTTCATGGAAAACTGGGTTTGTGGCAATGTATACAGCTGACTTGTTGTCACAATAAAGCTTGACTGGTGAATCTTGAGTGATATAAAGATCCTTCAGCATCTGATTGAACCATaacaactcctttgtggtttgtgccatacttctatattCAGCTTCTGTACTACTTGAGCTGACCACATCCTGCTTCTTTGATTTCCATGATATCAAAGAAGAACCAAGAAAGATGCACATACCAGAAACTGACCTTCTTGAGTCTTTACATGTGCCCCAGTCAGCATCTGCGAACCCATTCAAACTCAAATCTGAAGTTGCAGAGAAGAATAAGCCTTgacccggactgttcttcagatacttgagaatgttataaaccgcatgcaagtgaacatcagtagcacatgacaggAATTGACTCAACCTATTCACTGCAAATGTTATGTCAGGCCTAGTGATGCAGAGATACTGTAACCTACCAACCAATTCCCGATAAGGAGTTAGATCAGGTAATAGGGTGCCTGTTTCCTTATTCAATGGTTCTGTTGGATCCATTGgaacaggtttcggTTTACATCCCAACAGACCTGTATCAGCTAACAAGTCCAGGCAATACTTTCTCTGACAAACTGAGATACCAGCTGCACTTCTTGCTATTTCTAAGCCAAGGAAAAACTTTGCTGTACCCAAATCTTtagttttgaaaacattcccaagtgttgtctttaCAGAGTGAACAGCAGCATCATTGTTGCTCACTATTAGTATATCATCTACATATACTAATAATGCAATGAAGGAAGTACCTCTCAGCTTTGTGAAGAGTGTGTTGTCTGCATAAGATTGAACAAAACCATCATCCAGTAGTGCTTTAGATAAACACTTGTACCACTGTCTTGACGCCTGTTTAAGTCCATatattgacttaTGTAGTCTGCACACCGGATTTGGAGGAAGATTGCCATCAGCTGAGGTGTATCCAAGAGGTAAACTCATGTAAATCTcttcgtcaagatcactgtgcagaaaagcactagtgatgtccatttgcgagagactccaattcttcttagctgcacaatctagaataagcttgacactagccagtttagcaacaggagagaatgtctcaaagtaatctaccccttcttgttgagtataaccttttgcAACTAGTCTAGCCTTATATCTTTCTATTGTGCCATCAGCATTATACTTAATAGTATAAACCCACTTGCATCCTACTACATTCTTACCAGGTGGCAATGAAACAATACTAAAAGTCCGATTCGATTCCATAGAATCCAACTCCACATTCATAGCCTTTTGCCACTGAACAGATGCTATAGCTTGGTGAAAAGTTTTTGGTTCTGTTTCTAAGGAAACTGCAAGAATATAATCTTGGTatgtagggtttatgtttgaataagAAAGGTAAGAAGAAATAGGATAGGGAGTAGTTAAAATTTTTGCTGGTGGTGAAGAACTGGGAGTAGAAATTTGAGTAagggaacaatgATAGTCAGAGAGATAACCTGGTGCTTTGGATGGTCGCTTTGGCCTCGCATTAGGCAATGAAACCATGGTTGTCGCTGCAGGCACAGTTTCCACAACAACATTGTCTGCATTGCTAGAGTGTGAAGTATGTGTA