Capsella grandiflora (v1.1)
ID:
Scaffold114_LTR-Copia_81Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
162Start:
113172End:
113333Strand:
+>Scaffold114_LTR-Copia_81
TACTTTTTTACTTTTATATAAATGATCGTATTCAATTGATGAAAAAGANNNNNNNNNNNNGAAATCTTTCTCTCGTCTCTATTTATTATTTAGTACCCCGATCCTTTTGCAGGTGCAAATTTTTTTGTTATTATTAATATTTATATACACCATAAATATAAA
Capsella grandiflora (v1.1)
ID:
Scaffold1150_LTR-Copia_82Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
99Start:
33651End:
33749Strand:
->Scaffold1150_LTR-Copia_82
GAGGAAGACGAGGTAGATGATGATGATGTGGATGAGGTTGACGACAATGTAGATGATGATGATGATGATGTAGATGAGGTTGAGGACGATGATGATTCA
Capsella grandiflora (v1.1)
ID:
Scaffold11531_LTR-Copia_83Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
109Start:
12214End:
12322Strand:
->Scaffold11531_LTR-Copia_83
ATATATGTGCTTCAAAATACTTTGAGTCATCTCCAAGAGCGTTTGTTTACGTCTATCGACTGCTACGTTTGTGCTGAGGATATATATACTAGTTAAATACATCGCTATA
Capsella grandiflora (v1.1)
ID:
Scaffold1157_LTR-Copia_84Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
103Start:
15916End:
16018Strand:
+>Scaffold1157_LTR-Copia_84
TACCATACAATCTTTGTCATCACATCCTCATCGTACTATCATTTTTATCATCATCATAGCATAATGATCACTATAGCATCATGCATCATCAAGATCATCTATA
Capsella grandiflora (v1.1)
ID:
Scaffold1157_LTR-Copia_85Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
89Start:
129010End:
129098Strand:
+>Scaffold1157_LTR-Copia_85
TTCCGGTTACATATAATTGTGACAATATTAGAGATATTTAACAATGTGTGAATCCAATTTTTCACTCGCATATGAAACATGAGACCCTT
Capsella grandiflora (v1.1)
ID:
Scaffold11592_LTR-Copia_86Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
139Start:
633End:
771Strand:
+>Scaffold11592_LTR-Copia_86
TATTGGGCTATAAAGCCTCTTAACATATATGACGGTTTATATAGGTTAATCAGGTCTAAGTACATGTGTATATAAAGCCATTCTATGGCCACAGTAATCAATAAGAAACCTCTTTTACAagttcatatgtttgttgaca
Capsella grandiflora (v1.1)
ID:
Scaffold11592_LTR-Copia_87Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
979Start:
772End:
1750Strand:
+>Scaffold11592_LTR-Copia_87
tggtatcagagcatcaaacctaactactaaaaagttttttttttttgttcttgtggtctctatcttcggctaaagtgatcaaaatttttttttctattcctctctttttcccTATGGCTTCTGAATCAGAATATGAAAACTCTCCTCATCGTACTGAAACACGTTGAACGCTCTCACCATATGATCTTACATCTGGTGATAACCCTGGTATTCTCATTTCCAAACCCTTACTCAGTGGTCCTAACTATGATGAATGGTCCACACATTTGTGTTTGGCTTTGAAAGCAAGAAAGAAGTTTGGATTTGCAGATGGTTCTATTTCACAACCTGTTGAGAGTGACCCTGATTTCAAAGATTGGAGTGCCAACAATGCACTTGTCGTCTCATGGATAAAGCTCACCATTGACTACAGCATCTCCACCTTAATGTCTCACCTTGATGACTCTCATGAGCTTTGGACACATGTTTAAAAACGTGTTGGGGTTAAAAATGGCCAACGAGTTCAACGTCTTAAAACAGAGTTAGCTAACTGTCGTCAACAAGGATTGGCCATTGAAACATACTAAGGTAAGCTGCTCAAATTATGGAGAAGTCTTGCTGATTATCAACAAGCCAAAACAATGGAAGAAGTCCGAAAGGAAAGTGAGGAAGACAAACTCCATCAATTCCTCATGGGCCTCGATGATTCTGTTTTTGGAGCAGTCAATTTTGCTCTTCTTTCGCATACACCACTTCCTTCTCTTGAGGAAGCGTATATTACATTGAATCAAGACGAGAAGCCTAAGTCTTTAAGTCGCTTGACTGAAGCAAGGAGCGACGGTGTTAGCTTTGCTGTTCAGACCACTTCACGTCCTCAATCTTCCACGACAAATAGAGGTTCCTATGATAATCAAATTTGCTCTCACTGTGGGCGTCCTTGTCACATTACTGACAATTGTTTTAAATTAATTGGCTATCCTCTATGGCTTGAAGAAAAATT
Capsella grandiflora (v1.1)
ID:
Scaffold11605_LTR-Copia_88Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
168Start:
924End:
1091Strand:
->Scaffold11605_LTR-Copia_88
TGGACCAATCGGTCCGATGTTGGACCGATCAATTGTCTTGTTTCTAATCTGGTCCGGGCGAGTGGATCGATCGATCCAAGGTGGGGATCAATCGATCTTTTTGCTCCTGGAATGTGTCGTCGGTTTGGATCGATCAGTCTGACATTGGACCGATTGATCTTTGCTCTG
Capsella grandiflora (v1.1)
ID:
Scaffold11801_LTR-Copia_89Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1570Start:
8End:
1577Strand:
->Scaffold11801_LTR-Copia_89
AGGCTCGTTTTGGTAAGGACTTCGTAAAAATGTCAGCCAGTTGAAGAGTTCCTGGAATATGTTGTGTCTCAATTAAGCCCAAAGCAACCTGTTCGCGGATGTAATGATAATCAATGTCGAAGTGCTTTGATCGATTATGCAGGGCAGGATTGGTGCTGAGATATACTGCCGAGAGGTTATCACACTGAACCAAAGTCGTATGCAGCTGAGTAATGCCGAGATCTCGATGAAGAAATGAAAGCCATGTGAGTTCTTGAGCAACCGCAGTAAGTGCTCTATATTCAGCCTCTGTAGATGACTTGGACACTGTTGTTTGTCTTTTAGCGGACCATGATATTAAATTGGGACCAAGGAACACACAAAAACCAGTGGTGGAGCGACGAGTTGCTTTGCAGCCGGCATAATCACTGTCACTGTAAGCAAACAGTGATAAGTTCTGATTTTTCTGGATGCGAAGACCCATGTGGACTGTGCCCTTTATGTAGCGTAAAATTCGTTTCAAGAGGCCAAAATCTGCAGTTGTTGGGGCGTGCATCCTTTGACAGACGAAGTTGACAGCATATTGAATATCTGGTCGAGTAATGGTGAGATATTGAAGCTTCCCGGCTAAACTGCGAAAATATGTTGGTTCTGGAAATAATTCAGAGCTGAGGTTGTCTAGATCTTGCGGTAGAGGAGTTGGCATTGAGTTGCATTCTGACATTGCAGCTTGTTGGAGAATGTCAGATGCGTAAGAGGCTTGATGAAGGAACATGCCTGTTGAGTCTGATTTGATTTCAATGCCCAGAAAGTATTTTGGAAAACCGAGATCTTTCATGGAGAATCGCAAATTGAGTGAGTGTAGCAGAGCTTGAAGGAGAGATTGATCACTTCCAACCAGTAGGATATCATCGACATAGAGAAGTAATACAAGAGTGTTACCATTCTTATAGTATGTAAACAGAGAAGGATCAGATTTGCTGCAGGTGAACCCAAATTCTAGCAGATAGTTACTGAAGGTATCAAACCAGGCTCTAGGAGCTTGTTTAAGACCATAGAGAGCTTTGGTGAGACGACACACGTGGGATGGTTTTTCCGGATCAACAAACCCTGGTGGTTGACTCATAAAGACTGGTTCATTTAGTTCTCCGTGTAAGAAAGCATTTGAGACATCAAGTTGCTTCATGCTCCAGCCTTTTGCTGTAGCCACATCGAGAACAAGACGAATAGTTGCTGTTCTAACAACAGGGCTAAAGGATTCAAGGTAGTCTAACCCCTCTTCTTGATTAAAACCTTTTGCTACAAGTCGAGCTTTAAGCTTGTCAATCGTCCCATCTGGTTTAAACTTTGTTTTAAATACCCATTTGCAGCCCAAGATATTCATATCTTCTGTTGGTGGAACCAGGGACCATGTGTGGAGCATATTTATAGTGTTCATTTCATTCATAACAGCCTCGTTCCATCCTGGATGTTTGAGAGCAGTAACAACAGATTTTGGTTCTTCTGCAGTGTATTTTGAGGCAAGGAGAACATACCTCGAATTTGGCTTGTGAATCCCGGATTTAGCCCTTGTTATCATGGGGTGAGTATT
Capsella grandiflora (v1.1)
ID:
Scaffold11801_LTR-Copia_90Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
2324Start:
1834End:
4157Strand:
->Scaffold11801_LTR-Copia_90
GATTGCCAGGCTTCGAGTAAAGAGGTCTCATATCGTGGAACAAGAGATTGGTACTGCTCTTTGTAAGGAAATTTATTTTCATCAAAGACGACATGTCTTGAGATATAAACTTTTCCAGTTGGAGGATAAAGGCATCTGTATCCCTTATACTGCGAATGGTACCCAAGAAACACACATTGCAGAGAACGTGGATCAAATTTATGAGTTGTGATTGGACGTAAACAAGGATAACAAGCTGAACCAAAAACCCGGAGCATCGAGTAGCTTGGTTTCTGTTTAGTTAGGACTTCAAAAGGGCTGCGATCTTTCAAGACAGAGGATGGAAGGAGATTACTGATGAAGCTAGCTGTGAAGAAGGCTTCTACCCAGAAGTGTAACGGAGCATGGCTGTGGTATAACATAGAAAGACCAAGCTCAATGATGTGACGATGCTTTCTCTCGGCAATACCGTTCTGTTGTGGGGTATAGGGACATGAAATCCTGTGTTGAATACCACTTTCTGCTAAATGTTTCTTCATAGCAATACTTGTAAATTCACCACCTCCATCACTTTGAAACTCTTTGATTTTTGTATTCAGTTGATTCTCTACCAGTCTTTGAAATATAATAAAGGTTGGGAAAAAATCAGACTTCGCTTTCAGAGGATAAAACCAAGAGAACCGAGTGAATTGATCCACAAAAACTGCATAGTATTTGAATCCTTGATTAGATACAATAGGTGAGGGACCCCATAGATCACAGTGTACTCTATCTAAGGGATGATCCACACTAGACTCTGAAGCAAAAAACTGTAATTTAGAACTTTTCCCCATCTGGCAAGGCTCACAAATAGGAGAAATTCTGCTCTTATTGAAATTTATCTCCTTGCTGATCTTGAGTTGATGAAGAACGTTTGAGTTTGCATGTCCTAGCCGGTGATGCCATATCTCCTCAGACGCTGCACATTGCCGGTTGGAATACAGAGCTACAAACTCTTGGTTCTTCAATACATATAGGCCATTACTTCTTAGACCCGTTGACACCACTTTCTGAGTTTTTAAATCAATAATGTAGACCTTATTAGCATCAAAGAACACTCCACACGGAAAATCATCACATAGCTTAGATACTGATAAGAGGGATTTGTGTATATCAGGACAGACCAAGACTTCTTTCAAAGGAATTGTACCTGCAGCAGAAGATATGGTGGCGGATCCAAGATGTGTTATAGGCAGATAAGCACCATCTCCAACCAAAACTGCATCATTGCCTCCATAAGTGACAGACGAGTGAAGGTTGTTGGCGTTAGGAGTAACATGAGCTGTTGCACCAGAATCGGTGACCCAATCATTGCCATCAGACACTTGTAGAGATGAGAAAGCTTGAGCAGGGTCAGGACTTTGGTAATTGTGATCAAACCGGTTGTAACATCTTGCAGCAGTATGACCGACACGTCCACAGATCTGACAGACGGGACGGTCTCCTGAAGTTTGTGGGGTTGATTGATGTTGAGAAAATCCCCTGCCCCGTGAAGAATAGCCACCGCGTCCTCTGTTTTGTCCTGATCTGCCCCGACCTCGATGCCCTCCACGAAAGTTGTTACCATAATCAGTTTTCTGGACTTGAAAGGCTAAGTGAGGTGTAACTGCTTCAGTGGTAGTATAAGAGTGAAGCTTAGTGTCAAAGCTTTCGACTTCAGAGACAACGTCACTGAAAGTTGGTGGTGAGAGCTTGCTTAGAGAACTCTGAATAACAGTCGTGATGGGGTCGTATTCACGACCTAAACCGTTAAGAAACCCAAAGATCTTCATAGATTCATCAATGGGTTTACCAATGGAACTCAAGGCATCACATATAGCAATAAACTCACGACAATAAGCAGCAAGAGACATTTCTTTTTTTTCCAGAACCCACAAATTACGACGAAGAGTAAACTCTCTAGCAATGCTACTCTTGTTGAAATTTTCAGCTAAAGAGACCCAGATTTCTCGAGAAGTTGTGAGATTGTGGACATACCCGAGAACTTCTTCTGACAGCGTGCCAAACAGCCAAGACCGGATGAGTTGGTCTGTGCAGAACCATGATTCATATTGAGGGTTGAGCGTTGAAGTGGTTGTGTCGCCGGATCCGGTGGAAGTGGAGCGTGGTGGAGCTGTGACGGCACCATTCACGAAACCGATGAGCTTTTGGCATGATAAGAGGGACTCAAACTGAGTTTTCCACAAAAGATAGTTGGTGTTATTAAGCTTGATCGTGACTGTACTAGAGACATGAATATTGTCAGGAAAGGGATAGAGATCAGCCATTGAAGCACCTGTTAAGGTTTTACAATAGCTCTGATACCA
Capsella grandiflora (v1.1)
ID:
Scaffold1184_LTR-Copia_91Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4777Start:
329End:
5105Strand:
+>Scaffold1184_LTR-Copia_91
GTTGATCAGTATGATAATCCGTTTTATCTGAATAACAATGATCACGCAGGGTTGAATCTTGTTTCAGATAGGCTTAGCACAGCTTCTGATTTTAATTCTTGGAAGCGTTCTGTTATGATGGCTTTGAATGTTCGTAATAAGAttggttttatcaatggaacgattctaaaacctgctgaggatcatcgtgattatggagcttggtctcgttgcaatgatattgtatctacttggttaatgaactcagtttctaagaagataggacagagtttgcttttcataCCTACTGCTGAGGGCATATGGAAGAATATATTAGCTCGTTTTCAGCAGGAAGATGCTCCTAGGGTATTTGCTATAGAGCAGAAGTTGAGTAAGATTGAGCAGGGATCAATGGATATTTCGACTTATTACACAGAGTTGCAgactctatgggAAGAATATAAAAATTTTGTAGAAGTTCCTGTCTGCACTTGTGGTCGATGTGAATGTGATGCTGCAGTGAAATGGGAAAAACTTCAGCAGAGGAGTCGTGTCACAAAATTCCTTATGGGTCTTAATGAGAGTTATGATCAGACACGCAGACATATTTTGATGTTGAAACCTATCCCTTCTATGGAAGAGGCTTTCAATATTCTTACTCAAGATGAGAGACAGAAGATTATTAAACCCACTACAAGGATTGAGAATGCAGCTTTTCAAGCTTCTGCACCTGTAGATGGTGATATGGAAACTGCTTATATTGCAGCTTATAATACAGCTCGTGGAGCTCAGAAACCGATTTGTACTCACTGTGGGAAGGTGGGACATACGGTTCAGAAATGTTACAAACTCATTGGTTTTCCTCCTGGTTACAAGAATGTTGCTTCTGGTTATAATGTCAAGCCTCCGGCTCCCATTCCGAGTACACAGTTTCAGCCAAGGATACCAATGGCACAATCTCAACCAAGGATGACCTATTACCAACCAAGAGGACAGATGAGTCCCTATGAATCGATGCACAAGGCAAATGCTGTTGCTCAAGTTTACTCAGAGGTGCCTACAATGGTTAATGACTCTGGATCTTATACCCATCCTCAGTATATGCCTCAGCAATCTATGCCTTATGTTGCTTCAGATGGTTCTATCCAGAATTTGCAGAACCTATCATCTCAACAGATTCAACAATTAATACATCAATTCAACTCTCAAGTACAGGTTCCATCTCAGATACAAGATTCTGATGTGCAAATTGCAGCTGTTACTAGTGTTTCTAATAATGCAATGATTACTGAGAATGGTTTCATGGCCGAGTCTTCTTCTTCTGGTACTGTTTCTTTTCCTTCTACTAGTCTTAAGTATGAGAATAGTAATCTCACTTTTCAAAATCATACCCTTTCTTCCTTACAACAATTTTTACCAAAACATGCTTGGATAATAGATAGTGGAGCTTCTAGCCATGTGTGTTCAGACTTAACAATGTTTAAAGAATTAACATCAGTCTCTAATGTCACTGTTACACTTCCAAATGGTACTAGGGTTCCAATTACTCATACAGGCATCATCTGCATATCTTCTGTTTTAGTTTTGCATAATGTGCTACATGTACCGGATTTCAAGTTTAATTTGATAAGTGTTAGTTGTTTAGTTAAAACTTTGTCATGCTCAGCTCATTTTTTTCCTGATTGTTGTTTGATTCAGGAACGTTCTCAGGGCTTGATGATTGGGAGGGGTAAAATTTACAACAATCTTTACATTCTTGATACTGAGAAGCAATCCCTCTCACCATCACTTCCTGTGGTTTGTTCATTGTCTGGTTCTAAGTTGGATGATGGTGTTCTTTGGCATGAGCGTCTTGGGCATCCTTCACCAGCTGTTTTAAATAAACTTGTTAGTGTCATTCCTTCTCTGAAATCTATTTCTTCTACTATTTCTGAGTGTAAAATCTGCCCTTTAGCAAAACAAAAGAGATTAGCTTTTCTATCTCATAATAATCTAGCTTTACATCCGTTTGATTTAGTACATCTTGACATTTGGGGTCCTTTTAGTACTGAATCTGTAGAAGGTTTTAGGTATTTCTTTACTTTAGTTGATGATTGTACTCGTGTAACATGGGTTTATATGTTGAGAAATAAAAGTGATGTTTCAAAGATCTTTCCAGTTTTTCTTAAAATGATCACTACACAATATAATACAAATGTTAAGGCTATAAGATCTGATAATGCTCCTGAATTGGCTTTTACTAATCTTTTACAAGAATATGGAATGCTACACTATTTTTCATGTGCTTATACACCTCAACAGAATTCAGTAGTAGAAAGAAAACATCAACACTTGTTGAATGTGGCTAGATCATTACTATATCAATCAAACATACCTTTGCAATATTGGAGTGATTGTGTTAATACAGCAGTTTTCTTAATCAATAGATTACCTTCTCCTTTGTTAAATGATAAATCACCCTTTGAACTGTTGTTGAATAAGAAACCGGATTACTCTTTGTTAAAGAACTTTGGTTGTTTGTGTTTTGTGTCTACTCATTCACATGATAGACATAAGTTTTCACCTCGTGCTAGTCCTTCTGTTTTCTTAGGGTATCCATCTGGTTACAAAGGATATAAAATCTTGGATTTAGAATCGCATTCTATTTCAATTTCTAGGAATGTAACTTTTCATGAGAATTCGTTTCCTTTTAAAACTAGTGATTTGCTAGCTCAGTCTGTTGATCTGTTTCCAAATAGTATATTACCATTACCTGTACCATTACATTTTGTAGAAACTTTTCCAATTGATGATATTACACCTGCTGGAATTACTAATGCATATGCACCTGCACCTGCATCTTCTGTGCCTGCATCTTCTGTGCCTGCATCTTCTGTGCCTGCATCATTTAGTCATACATTACCTGCTGTACCATCAAGTAATCCTAGTACCATTACTAATAATACAGGGACACATGATACTGTTATTAATCCGATGAACATTGTTAGACCTAAACGTGCTACTAGAGCACCTAGTTATCTGACTGAGTATCATTGCTCTCTTGTCCCATTTATTTCTaatcttccacccacagataatacttctattcctatactaaatactacTATTACTACAGAAAGTATTAAACCTCATACTACACCTTATCCTATCTCATCTTATATCTCTTATGATAAACTCTCTCCCATATATAATTCATATATCTGTTCTTATAGCTTAGAAACAGAACCTAAGAATTTTAGCCAGGCCATGAAGTCAGAAAAATGGACAAAGGCTGCAAATGAAGAACTTCAAGCTTTAGAACAGAATCACACTTGGGATGTTGAGTCTTTACCAGATGGAAAGAATGTAGTAGGCTGTAAATGGGTGTTTACTATCAAGTATAACCCTGATGGTACTGTGGAAAGGTACAAAGCTAGGCTAGTAGCACAGGGGTTTACTCAACAAGAAGGGCTGGATTTTCTAGACACTTTTTCACCTGTTGCTAAACTAACCAGTGTGAGATATATTCTTGCTCTTGCTGCTTCAAAAGGCTGGAGTCTCACACAGATGGATGTTTCAAATGCTTTCTTACATGGAGATTTGGATGAAGAAATCTACATGAGCTTACCACAAGGATACACACCCAAACACAATGCTTTGCCTTCTAATCCGGTATGTCGTTTACGAAAATCTCTATATGGATTGAAGCAAGCATCACGCCAATGGTATAAACGTTTCTCATCAGTTCTATTGGGTGCAAATTACATACAATCGCATGCTGACAATACTCTGTTTGTCAAGATAGTTCCTGGTGCTTTCATTGCAGTTTTAGTATACGTTGATGACATTATGATAGCGAGTGATAATGAGACTGCAGTGGAGAGTTTGAAGACTTTGTTGCGATCAGAATTCAAGATAAAGGATTTAGGTCCAGCTCGTTTCTTTCTTGGTCTGGAAATAGCACGATCAAATGCAGGAATCTCAGTGTGTCAACGCAAATATACTCAGAACTTGCTGGAAGATACTGGTCTGTTGGGATGCAAGCCTAGTTCGATACCAATGGATCCAAATTTGCATTTGACCAAAGAAATGGGAACCTTATTGTCTAATCCAAAGACTTACAGAGAGCTGGTAGGAAGGATGCTATATTTGACTAATACAAGACCTGACATCACCTTTGCTGTTCATCAACTTAGTCAGTTCATCTCTGCTCCTACTGACATACACTTACAAGCTGCATATAAGGTTCTTCGATATCTAAAAGGTAATCCAGGACTTGgcttgatgttctctgctaattctgagatttgtatcaatggttttgctgatGCGGATTGGGCAAATTGCAAAGATACAAGGAGATCTGTTTCTGGTTATTGCATGTATCTTGGCACTTCACTCATTTCATGGAAGTCTAAGAAACAACAAGTTGCGAGTAGGAGCAGCACAGAATCAGAATATAGGAGTCTTGCTAATGCTACTTGTGAGATTATTTGGCTTCAACAACTCCTCAGAGATCTACACATTACTCCTGTTTGTTCAGCCAAATTGTTTTGTGACAACAAGTCAGCTCTTCATATAGCAATGAATCCAGTTTTCCATGAGAGGACTAAACACATAGAGATTGATTGCCATATCGTTCGTGATCAGATAAAAGCAGGGAAACTGAAGACATTACATGTTTCTTCAGGAAATCAACATGCAGACATACTCACCAAGCCTTTACACCCAGGTCCATTTTTCAACATCCTTCAACAAATGTCATTATCAAGTCTATATCTTCCAACAGCAGATGTTCTGAAGATAAAGACTTGAGGGG
Capsella grandiflora (v1.1)
ID:
Scaffold11843_LTR-Copia_92Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
499Start:
607End:
1105Strand:
+>Scaffold11843_LTR-Copia_92
TCAAGATCTGTTGTaccaactggctgcctacaaccaatgatgggtatgtcactcctgacagagccaaattggtctacaaggtgatgcatcagaagccgtttgattttgggaggatggtctttaagctgatcatcaacatgggtttgacccctgtctCAAAGTTGTGCCTGCCGTTTCCCAGTTTGATTTATCAGCTGATCCAGTCATAGCACCTTGTGCATCCGGATGTATCTCAGCCAGTGCCAAAgtccaacaagAAGGGCAAAGCGAAGAGAGGACAGACTGCTGAGATTCCAGTATGCTCTTCAGATGATCGCAAGGCTTTGCGTCGTGCCATTCAGATCATGCAGCGTATCATCGATGCAGGTAAGTGTTTCTTCTTTCAatctgtcattcctgtgatccataagttacttgttttttacttagttgtgcaaacaagcagggggagatgattctgattctgatgatcataggactggttgatttgtgggggagc
Capsella grandiflora (v1.1)
ID:
Scaffold11843_LTR-Copia_93Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
90Start:
1206End:
1295Strand:
+>Scaffold11843_LTR-Copia_93
TTGGGTCTGTAATAAGTTTAAACATGGCATTTTAGGATTTCTATTTTGGGATTTGTGCTAGTTATATTGCTAGATGTTTTCCTTGTTGCT
Capsella grandiflora (v1.1)
ID:
Scaffold1189_LTR-Copia_94Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
100Start:
4003End:
4102Strand:
->Scaffold1189_LTR-Copia_94
GTTTTTTTTTTGAGTTTACTATAAGACTACAGTAATTAAATAAACACACCTTAAAGATCAGATCTCCTATTGAGCAAGCAACTGTATCTTGAGGAATTAT
Capsella grandiflora (v1.1)
ID:
Scaffold11903_LTR-Copia_95Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
382Start:
296End:
677Strand:
->Scaffold11903_LTR-Copia_95
TGTTGAAGAATTTGAGAAGTAAAAGGTTGCAAACTAAAAGAATACACACCCAAATTGTTAACCGAGTTCACTGCCTCTAACCGCGGGAAAAATCTTGCTCCCAAATCCACTATATGAAAGAGATTACACTTACACACACCACACTAATCACTTGTGATGTTATTTGTATTACAGGTTCTCTCTCactcaaggatctaaaattaacaagaagaaacaacaCTCTCTCTTTTAGTGTCTTCTCAGCTTCCTCTCTTCTACCCTCTTGATCCAACGTGACAGCAAATATATAGGTGAGTGGGCTTTAGAACATTTTCATATTGTCTCTCCATGTCCATTTTCATCAGGTCCATTAAGGCCCAATAATTTTGTTTTGTCAAACCCA
Capsella grandiflora (v1.1)
ID:
Scaffold11930_LTR-Copia_96Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
243Start:
4573End:
4815Strand:
->Scaffold11930_LTR-Copia_96
AGAGAAGAGTAACAAATGGTTGTTTGTAAACAAAACAACACACATAAATTGGTAACCGAGTTCACGGCCTCTAACTGCTACGTCACGGGGGAGAACTCTTGTTCCCAAACTCTACTATATGAAGGAAGTTACACCACTAAGATTTTACAGGTTCTCTTACACGGATCTAGACTCAAGATACAACAACAAAGCTTTCTAAAGAACACTCTTTTGTTTCCCTCTCTAGAACTCTCTATTTCCTGT
Capsella grandiflora (v1.1)
ID:
Scaffold1194_LTR-Copia_97Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
83Start:
32591End:
32673Strand:
+>Scaffold1194_LTR-Copia_97
TGTTTTTTTATTTTTTATTTTTCCTTTTTTGTTTCCCCCCGAAGAGAAGAAAAACAAACAAACAAAGAGAGAGAGAGAGAGAG
Capsella grandiflora (v1.1)
ID:
Scaffold12009_LTR-Copia_98Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1295Start:
1End:
1295Strand:
+>Scaffold12009_LTR-Copia_98
TTGCTCCAGTGGCCAGAATTGAAACAATCCGGTTTATTATTGCATTAGCGGCATCAAACGGCTGGGAAGTACATCACTTGGATGTAAAGACTGCTTTTCTTCATGGAGACCTAAAAGAGGATGTCTATGTTAAGCAACCAGAGGGATTTGTGATCAGAGACAAAGAGGAGAAGGTCTACAAATTGCATAAAGCCTTATATGGACTAAAGCAAGCACCTAGGGCATGGAACACTAAGTTGAATAAAATTCTTAGTGAACTGAAATTTGAAAAATGTTCCAAAGAGCCTTCTCTATACAAGAAAAAGGAGCTAAATCATCTTCTAATTGTTGCAGTTTATGTTGACGATTTGCTTGTTACAGGTTCCAACTTGGCTATGATACTTGACTTCAAAGAAAAGATGGCTGGAAAATTTGAAATGAGTGACTTGGGAAAACTTGCTTACTACCTCGGCATAGAAGTTCTTCAAGGAGAAAATGAGATTATCTTAAAACAAGAAAGATATGCGATTAAAATAATGGAAGAAGAAGGAATGAGAGAATGCAACCCAGTTCTTATACCAATGGAATCAAATCTTGAGCTCTCTAAAGGACGAGATCCGAAACGTATCGATGAACAAAGCTTTAGAAGAAAGATTGGTTGCTTGAGATACTTACTTCATACTCGACCTGATCTCTCTTATCCGGTGGGAATTCTAAGTCGATATTTGCAAGAGCCAAGAGAACAACATGGAGCTGCACTCAAACAAATCCTGAGGTATTTACAAGGCACTCTTAACTATGGTCTCTGTTTTCGTCGTGGAGATCAATCTGGCTTAGTAGGGTACAGTGATAGCAGTCATAGTGTGGATGTGGATGATGGAAGAAGTACAGCTGGTCATGTTTTCTATTTCAATGAGTGTCCGATTACTTGAAATTCTCACAAACAGCAGGTCGTGGCACTTTCTTCTTGTGAAGCAGAATTCATGGCTGCTACAGAAGCTGCTAAGCAAGCCATTTGGTTAAAGGATCTCTTCGCTGAAATCATTGATAAATAATGTGAGAAGGTGACAATTCAAGTTGACAACAAATCCGCTATTGCACTTACTAAAAATCCAGTGTTTCATGGGCGTAGCAAGCATATTCATCGAAGGTATCATTTTATACGTGAATGCGTTGAAAATGAACAAGTGGAGGTGATACATGTTCCGGGAGTGGAACAAAGAGCAGACATCTTAACTAAAGCACTTGAGAAGAACAAGTTCAAGGTAATGAGAGATCTCATTGGAGTCCATAGCTTGTCAAAGAAAGACTTCAAG
Capsella grandiflora (v1.1)
ID:
Scaffold12046_LTR-Copia_99Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
288Start:
7070End:
7357Strand:
+>Scaffold12046_LTR-Copia_99
TGTTAGTTTTATAATTGAGTTTGGTCATATTATTTAGTATAAATTAGTGTATATACTAAGTCAAGAGGTATGTATGTAAGGGTAGTGAATGACTTGTCAACTAAGACACAACCATTAATAACAGTTAATTACACTTACGACCGTAGGACATGTATATAAGTATATTCGTGTGGCTGTAACACATTACAGTGTTAGTTTCATAAAAAAAGTTTGGTTCTTGTCTTCTTTACAAGAGAAGAGACAAAAGGTCTCTTACTATGTTTTTTTCATTCTCTCAATATTCCAACA
Capsella grandiflora (v1.1)
ID:
Scaffold12050_LTR-Copia_100Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1846Start:
53End:
1898Strand:
->Scaffold12050_LTR-Copia_100
CCCCCCTCAAACCGAACGATCTTTAGGAGTATAAAGGTTTGAAATCGACATACGACCAAGTAGATTATGAAAAGGACCCGGCTGTAATGGTTTGGTGAGTATATCCGCCAGTTGATTGCAAGAAGACACATGGAAGAGCTTCAAGAacccattcttgatctgatcccttgtcgtatgacaatCAATTTCCACATGCTTTGTTCTTTCATGGAAAACTGGGTTTGTGGCAATGTATACAGCTGACTTGTTGTCACAATAAAGCTTGACTGGTGAATCTTGAGTGATATAAAGATCCTTCAGCATCTGATTGAACCATaacaactcctttgtggtttgtgccatacttctatattCAGCTTCTGTACTACTTGAGCTGACCACATCCTGCTTCTTTGATTTCCATGATATCAAAGAAGAACCAAGAAAGATGCACATACCAGAAACTGACCTTCTTGAGTCTTTACATGTGCCCCAGTCAGCATCTGCGAACCCATTCAAACTCAAATCTGAAGTTGCAGAGAAGAATAAGCCTTgacccggactgttcttcagatacttgagaatgttataaaccgcatgcaagtgaacatcagtagcacatgacaggAATTGACTCAACCTATTCACTGCAAATGTTATGTCAGGCCTAGTGATGCAGAGATACTGTAACCTACCAACCAATTCCCGATAAGGAGTTAGATCAGGTAATAGGGTGCCTGTTTCCTTATTCAATGGTTCTGTTGGATCCATTGgaacaggtttcggTTTACATCCCAACAGACCTGTATCAGCTAACAAGTCCAGGCAATACTTTCTCTGACAAACTGAGATACCAGCTGCACTTCTTGCTATTTCTAAGCCAAGGAAAAACTTTGCTGTACCCAAATCTTtagttttgaaaacattcccaagtgttgtctttaCAGAGTGAACAGCAGCATCATTGTTGCTCACTATTAGTATATCATCTACATATACTAATAATGCAATGAAGGAAGTACCTCTCAGCTTTGTGAAGAGTGTGTTGTCTGCATAAGATTGAACAAAACCATCATCCAGTAGTGCTTTAGATAAACACTTGTACCACTGTCTTGACGCCTGTTTAAGTCCATatattgacttaTGTAGTCTGCACACCGGATTTGGAGGAAGATTGCCATCAGCTGAGGTGTATCCAAGAGGTAAACTCATGTAAATCTcttcgtcaagatcactgtgcagaaaagcactagtgatgtccatttgcgagagactccaattcttcttagctgcacaatctagaataagcttgacactagccagtttagcaacaggagagaatgtctcaaagtaatctaccccttcttgttgagtataaccttttgcAACTAGTCTAGCCTTATATCTTTCTATTGTGCCATCAGCATTATACTTAATAGTATAAACCCACTTGCATCCTACTACATTCTTACCAGGTGGCAATGAAACAATACTAAAAGTCCGATTCGATTCCATAGAATCCAACTCCACATTCATAGCCTTTTGCCACTGAACAGATGCTATAGCTTGGTGAAAAGTTTTTGGTTCTGTTTCTAAGGAAACTGCAAGAATATAATCTTGGTatgtagggtttatgtttgaataagAAAGGTAAGAAGAAATAGGATAGGGAGTAGTTAAAATTTTTGCTGGTGGTGAAGAACTGGGAGTAGAAATTTGAGTAagggaacaatgATAGTCAGAGAGATAACCTGGTGCTTTGGATGGTCGCTTTGGCCTCGCATTAGGCAATGAAACCATGGTTGTCGCTGCAGGCACAGTTTCCACAACAACATTGTCTGCATTGCTAGAGTGTGAAGTATGTGTA