ID Class Order Superfamily Length Start End Strand View
Scaffold10937_LTR-Copia_61 RetrotransposonsLTRLTR-Copia8423872470-
Scaffold1097_LTR-Copia_62 RetrotransposonsLTRLTR-Copia2261258312808-
Scaffold10982_LTR-Copia_63 RetrotransposonsLTRLTR-Copia273312733+
Scaffold1099_LTR-Copia_64 RetrotransposonsLTRLTR-Copia5036951197+
Scaffold110_LTR-Copia_65 RetrotransposonsLTRLTR-Copia1742324423417+
Scaffold110_LTR-Copia_66 RetrotransposonsLTRLTR-Copia1243228832411+
Scaffold1111_LTR-Copia_67 RetrotransposonsLTRLTR-Copia134136176136309+
Scaffold1111_LTR-Copia_68 RetrotransposonsLTRLTR-Copia1209136310137518+
Scaffold1111_LTR-Copia_69 RetrotransposonsLTRLTR-Copia177137681137857+
Scaffold11112_LTR-Copia_70 RetrotransposonsLTRLTR-Copia11339151+
Scaffold11199_LTR-Copia_71 RetrotransposonsLTRLTR-Copia5661566+
Scaffold11254_LTR-Copia_72 RetrotransposonsLTRLTR-Copia26439904253+
Scaffold11254_LTR-Copia_73 RetrotransposonsLTRLTR-Copia57483028875+
Scaffold11302_LTR-Copia_74 RetrotransposonsLTRLTR-Copia11318671997-
Scaffold11302_LTR-Copia_75 RetrotransposonsLTRLTR-Copia60022272826-
Scaffold11302_LTR-Copia_76 RetrotransposonsLTRLTR-Copia26130363296-
Scaffold1131_LTR-Copia_77 RetrotransposonsLTRLTR-Copia3098181126+
Scaffold11333_LTR-Copia_78 RetrotransposonsLTRLTR-Copia190754943+
Scaffold11385_LTR-Copia_79 RetrotransposonsLTRLTR-Copia153211532-
Scaffold114_LTR-Copia_80 RetrotransposonsLTRLTR-Copia126112851112976+

< 4 5 6 7 8 > Total 58


Capsella grandiflora (v1.1)

ID:

Scaffold10937_LTR-Copia_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

84

Start:

2387  

End:

2470

Strand:

-

>Scaffold10937_LTR-Copia_61

TTGTGTTATTTTTTTTGCATCAAACGGCTTAACTTCGCATGAGCCTGCACATTTATATTCGACATGTGTTCTAGTCTTCTAGAT

Capsella grandiflora (v1.1)

ID:

Scaffold1097_LTR-Copia_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

226

Start:

12583  

End:

12808

Strand:

-

>Scaffold1097_LTR-Copia_62

AAGACAAGAACAGAAACTGAAATTTTTATTGAACTGAAACTTGTTATTTTTACATGATGATACAATGAGTTTAAATAATAGAAAACTAATAGACACAACAGCACAAAGTGTTGTGTCTCTTCATACTTGAGTCTCTTGGATGAAACAACACAACCGTCACGACTGAAACATTGCGACTCTTAACCAAACTCAATTATCAATAAACATTCTTGACATTATAACATAT

Capsella grandiflora (v1.1)

ID:

Scaffold10982_LTR-Copia_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2733

Start:

1  

End:

2733

Strand:

+

>Scaffold10982_LTR-Copia_63

TTGTACAAGTCACAAGATCTGCAAACCGACTTTACAAAGCTCCAATGGAGATTGGATATTCTAAGTGTTTACTTTCACAAGATGATGACATCACGGAAACTTGGCATGCAAGATTGGGGCATGTTAGTGTTGGTGTTATGAACAATATGGTGAAGAAGGAGATGGTTGTTGGGATGCCACAAACAACACATGAGAAGAGTGtgtgcagcgcttgcttggccgggaagcaaattcgaaattcctTCCCGACTAAAGCAACTTACCGTGCGGCTCAAGCTTTGGAGTTAGTACACGGCGATTTGTGTGGACCAATTTCACCACCTACACCATCAAGTAATCGGTATGTGTTTGTCTTGATTGATGACTTTTCAAGGTatatgtggacgaggttattaagggagaagagcgaggctttcgatcggttcaaaagttttaaggtgATGGTAGAGAAGAGAACCGGACTGAAGCTTAAAACCTTTCGCACCGATAGAGGGGGTGAGTTCACCTCGACTGAGTTTAATACGTTTTGCGACGAGAACGGTATTATAAGGCATCTAACGGCACCATATACACCACAACAaaatggtgtggTAGAGAGGAGAAACCGCACACTTATGGAGATGACAAGAAGCTTGCTTAAAGCTATGAAGATTCCGAATGATATGTGGGGAGAAGCCGTACGTCATTCAACATATCTCATAAATCGAGTTCCAACAAAAGCTTTGCAAGGTCAGACCCCATATGAATGCTTCACATTCAAGAAACCAAACATTGAGCATTTAAGAGTGTTTGGATGTGTAGCATATGCAaaaatcacgggACCACATCTTAAGAAGTTAGATGATAGGTCGAGAACGGTGATTAATCTCGGAACGGAACCGGGTTCGAAAGCTTATAGGCTTTACGATCCAATTACTAAGAAGGTCTTTGTGAGTAGAGACGTGGTGTTTGATGAGAAAAAGGCTTGGGATTGGTCAGCTTCTACAACACAAACCGAAGGTGAACCGGGGAGATTTAAATTAACGTATAGAGGTGATATAGAAGATGGTGCTGGATACAATGATGATGACGTGGAAGAACAAGTTGTTGATGAGCATCACGTTCCAGATCATGAGCCTATACACCACGATGAAGACGTTGAAGAAGAGAACGTAGAAGTGGAAGCTGAAAATCAACCTATAACGACAAGATCTGGTCGTGTCATTACAAAGCCAAGGTATCTCAACGACTACGTTTTACTAGCTGATCTTGAGAGTGAAAAACTCTTACTCACGGTAGATGGAGAACCAGAGAGTCTTATGGAGGCTATGAGTCTAAGAGAATGGGTAGAAGCAATGGAAGTTGAGTTGGattctatcgcaagaaacaagacatgggagttggttaagaagccGGATGGTGTTAAACCCATAGGAGTGAAGTGGGTTTATAAAGTCAAGAGGCATGCGGATGGTTCAGTGAATAAGTATAAAGCAAGACTTGTGGCAAAAGGCTATGTTCAACAAAAGGGTATAGatttcgatgaaGTCTTTGCACCCGTAGCTCGAATTGAAACCATAAGGTTACTCATAGCTATTGCAGCAACAAGCGGCTGGGAGATACatcacctggacGTCAAGACAGCTTTCTTGAATGGAGAGTTGAATGAGCTGGTCTACGTTTCTCAACCCGAAGGTTTTGTTAAGAAAGGCAAAGAGAATCAAGTATACAAGCTCTACAAAGCATTGTATGGGCTACGACAAGCTCCGAGAGCTTGGAATGTGAAACTTGATCGTGTTCTAAAGGAGATGGGCTTTAAGAAGTGTAAGAAAGAACCATCGGTTTATCTTAAAAGAAACAAGGAGAGTTTCTTAATTGTGGCAATTTACGTTGATGACTTGTTTGTGACGGGTACTTCACGAGGAGTCATTGAACAATTCAAGAAGGATATGTCAAAGCAATTTGAGATGTCAGATCTTGGAAAGCTAACTTACTATCTTGGTATAGAAGTAATTCAAGGGGCTGATGGAATTCAAATAAAACAAGAAGGTTATGCTCGAGGAATACTTGAAGATACGAAGATGGAGGAGAGTAACTTGGCTCTTGTGCCGATGGAGCCTAGTACCGTGATCTCAAAGGGTGAGAACGAAGCTGAGATTGATGCCACACGATACCGAAGAACCATAGGCTGCTTAAGGTACCTCATTCATACAAGACCAGACATGGCGTTTGTTGTAGGTGTTCTAAGTCGATACATGCAAAGTCCAAGAGCATCACATGGGCAAGCGCTTAAGCATGTTCTGAGGTATGTGAGAGGAACCACTAACTTTGGGCTAATCTTTAAGAGAGATGGGTCAAGGAAGGTTGTTGGTTATAGTGATAGTAGCCACAAAGCTGACATTGATGACGGTAGAAGCACGGGTGGACATATGTTTTATTTCGGCTCGTCGCTTATAACATGGACATCACACAAGCTCTcatctgtcgctttatcatcgtgtgaagcggagttcatggcggCAACGGAAGCAGCGAAGCAAGCTATATGGCTTAAAGAGTTGTTAAGTGAAGTCTTGAGTTTAGATGAGAAGATCTTGCTGAGGATTGACAACAAGTCAGCCATTGCACTCACTAAGAATCCGGTATTTCATGGAAGGAGTAAGCATATACTCTTGAGATATCATTTTATTCGTGAGTGTGTTGAGAATGAGCAAGTGGATGTAGAACATGTACCCGGTGAGGAGCAGAAGGCAG

Capsella grandiflora (v1.1)

ID:

Scaffold1099_LTR-Copia_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

503

Start:

695  

End:

1197

Strand:

+

>Scaffold1099_LTR-Copia_64

AAATCAATCGGATTGAAATGGGTCTTCAAGATCAAACGAAATGACGATATCACCATTTATAAATAAAAAGCTAGACTCGTGGTAAAGGGTTATGTTCAAAGACATGGAATAGATATTGAAGGTCTTTGCTTTGGTGGCTCGCATTGATACAATTCGGTTTATTATTGCAGTAGCAACATCAATTGGTTGGGAAGTGCATCATTTAGATGTCAAGACTGCTTTTCTACATGGAGATTTGAAGGAAGATGTCTATGTCAACCAACGAGAAGGTTTTATGATCAAATTCAATGAGGAGAAGGTCTACAAACTACACCAAGCTCTATATGGACTAAAGCAAGCACCTTAGGCATGTAAGACTAAGTTAAATAAAATTCTTGCTGAATTGAACTTTGACAAGTGCTCCAAGTAACCCTCAATATACAAAAACAGGAGCAAGAACAACTTTAATTGTGGCAGTCTATGTAGATGATTTGCTTGTTACAGGTTCTAGCTTAGAGTTGATA

Capsella grandiflora (v1.1)

ID:

Scaffold110_LTR-Copia_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

174

Start:

23244  

End:

23417

Strand:

+

>Scaffold110_LTR-Copia_65

CAAGATGAACCTATCATACCACAACTTGTTCGGACTACGGATCAAGTTGCATACATTTTCACTAAAGCTTTTGGGAGTGTTCAATTTCGATATTTACTTAAGCAATTTGAACATTTGTGATCTCCATATTCCAATTTGAAGGGGAGTATCATGGGCAGGATGAGTTATATATTT

Capsella grandiflora (v1.1)

ID:

Scaffold110_LTR-Copia_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

124

Start:

32288  

End:

32411

Strand:

+

>Scaffold110_LTR-Copia_66

TTGATCTGCTTCTTCCTCCTCGTCATCATCCTCTTCGTCATCATCCTCGTCATCCTCATCATCTTCCTCGTCCTCTTCATCATCATCATCTTCATCAATCTCATCATCGTCTTCCTCCATATCA

Capsella grandiflora (v1.1)

ID:

Scaffold1111_LTR-Copia_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

134

Start:

136176  

End:

136309

Strand:

+

>Scaffold1111_LTR-Copia_67

gtatagcttaaTTAGAGTCTGTATAAGTTGAGATTAGCTGGTTTAGAGGCTTTGGTTTAGGCCTGGTCATGTGTATATAAACCCCCAATTGTACATTTTACATAATTAATGAGAATGAGATTCTTTTACTAATa

Capsella grandiflora (v1.1)

ID:

Scaffold1111_LTR-Copia_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1209

Start:

136310  

End:

137518

Strand:

+

>Scaffold1111_LTR-Copia_68

tggtatcagagcgtttacactctcgttctctctaacaaatttttctgatcttccgccggaaaagtttgttacgttaccggagttcttcgattccgatctcgattctttgctgtagtcttcgcttcttctcttctttcgattcctccTCAGATTCAGCTTGATTTCGCCTCTCATCGTTCGATTTCAGCTCATCTGTTCTCCATGGGAAAACGAAAGACGAACTCGAAGTATCGATCCTCTACACCAGATCTACCGGAAAACGATTCTCCGATCTCTCATGACAAGACTCGTAGCTCTTCACCGTCGCGTAATGCTCTTGGCTCTGCGTATCCGGTTTCTAATGCTCGATTCAAGTCATCTACTCCTCATTTTGAAATCTCGAACTCTCCTGACAATATCCACAGTCCTTTTCACCTTCACAGCTCCGATCATCCAGGTCTCGTTCTTGTCCCTGATCTCTTAGATGGAACCAATTATGGCACCTGGATTGTTGCGATAACCACTAGTATCGAAGCTAAGAACAAACTAGGATTTGTGGATGGTTCTCTTGTTCGACCTGATGAATCCGATCCTTACTTTCTGATTTGGAAACGTTGTAATAGCATGGTGAAGTCGTGGCTATTGAATAGTGTCTCGAAACAGATCTACTCCAGCATTCTCTACTTTGCTACAGCAGCAGAGATTTGGAAAGATCTCTACACTCGATATCACAAATCCAATCTCCCACGTCTCTACAAGCTTCGCCAGCAGATACACTCTCTTCGTCAAGGAAGTATGGATTTGTCTTCGTATCACACCAAAACTCAAGCTCTTTGGGAAGAATTGTCTAGTCTTCAGGTGACTGCAAGATCTGTTGAAGATTTACTTGCTGAAAGAGAAACAAACCGTGTCATAGACTTTCTCATGGGACTCAACAACAACTATGACACTGTTCGTAGCCAGATTCTTATGAAGAAAAGCTTGCCTTCTCTATCTGAGGTTTACAATATGCTGGATCAGGATGATTCTCAGAGGTCTGCTTGTCTTCCTCAGACTGCTACTTTAGACTCTACAGCATTTCAAGTCTCTCAGCAAACATCTCAGAGCACATCTTCTGGTGGTTATCAAAAGAAGGATAAACCTGTTTGTACTTTCTGTGGTAGAATTGGACATGTCATGGACAAATGTTACAAGAAAAATGGCTATCCAGTTGGACATCCAAGGTTCAAG

Capsella grandiflora (v1.1)

ID:

Scaffold1111_LTR-Copia_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

177

Start:

137681  

End:

137857

Strand:

+

>Scaffold1111_LTR-Copia_69

ACCTGAAGTTCATGCTGTTTCAGTGTCTTCCCTGCCCTCTTCTTCTTTAACCACTGGCCCAGCACCTGGTACCTTCTTCCCCTCTATCATTTgttcttttaccAGTGCTGATAGGCCTTATGCATATTCTGTCAATAGCAACTTAATAGCTATTAATGCTTGGGTGATAGACACAGG

Capsella grandiflora (v1.1)

ID:

Scaffold11112_LTR-Copia_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

113

Start:

39  

End:

151

Strand:

+

>Scaffold11112_LTR-Copia_70

TGGATGGCAGAGTGATAAGTCTGTATTTCACCACTTTTTGAGCATGTATTCATCATCTTTACAACATCATTCACTTGTTGATTCGCATCATATTGATCACTTTATGCATGTTT

Capsella grandiflora (v1.1)

ID:

Scaffold11199_LTR-Copia_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

566

Start:

1  

End:

566

Strand:

+

>Scaffold11199_LTR-Copia_71

TCTATCCAAAAAATGTAGCTTCTGCTTCTGTTGCTGAAATCAATAAAAACCCTATTGCTTACTTGGTTGAGTTGTTTACTACTTGGCATGAATATTTAGGACATGTAAATTATAAGAAATGCAAAAAATGCAAAATTTGAATTTAATTCTAAAATTCAAAACTAACCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGATGACTACACAAGATATTGCTATGTATATCTGTTACATAGTAAAGATGAAGCACTGGAAAAATTCAAAGAGTTTACACTCGAAGTAGAAAAACAGCTGCAGAGAACTATAAAAGTAGTTCGAAGTGATAGAGGACGAGAATATAATAAGCCGTTTAATGCATTTTGTAGAGAAAAAGACATTATACATCAAACGACCACTCCTTACTAACCAGAATCTAACGGAGTTTTGGAACGAAAGAATCGA

Capsella grandiflora (v1.1)

ID:

Scaffold11254_LTR-Copia_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

264

Start:

3990  

End:

4253

Strand:

+

>Scaffold11254_LTR-Copia_72

TATAAATAAAGAGAAGTCTCTGGAATTTCTGAATTCTGTCAGATTGCAAAGAGCAGCAGACTACCCTTCTCTAGCTCTAGTTATCAAGCTTTACTTCCTTGAGAACGGATGAACTCTTACTTATTGGGACCTGCCCCAGTTACCTCTCCTCTGTTCAAGGTTTGAAGTACTATGTTATTTTCATCGACAATTATTCACAAGGTTCTGTTGGATGTTCCCGTAACTAAGTTTTTCTTTCTTACTTTTTATGTACTTTAGACTTTT

Capsella grandiflora (v1.1)

ID:

Scaffold11254_LTR-Copia_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

574

Start:

8302  

End:

8875

Strand:

+

>Scaffold11254_LTR-Copia_73

AACCTCTATGTTTTGGATTCTGATCCATCTCTTTCAGGTACTACTTTTTTTAGTGCCTCTGTTATTGCAGATTCTCACACTTGGCATAACAGGCTAGGCCATCCTTCTTCTTCTAAAACTGCTATCCTTTCAGATTTACTCCCTACTCATAAGAATAAAAAGGTCAATCAGACCATTTGTAAAATCTGTCCTTTGGCTAAACAAAAACACTTACCTTTTAAATCTCATAATAACATTTGTGATGAACCTTTTGATCTGATTCACATTGACATTTTGGGCCCTTTTTCAGTTGAAACCTCAGAACAGAAGGTTTTCGATATTTTTGAACCATAGTGGATGATCATTCAAGGGCTACTTGGGTCTATCTTCTCAAAAGTCAAAGTGAGGTTCTCACTGTCTTCCCAGGGTTTCTAAAGCTCATAGAAACTCAATACAAAAGGGTAGCCAAAGCTGTTAGAGCCGATAATGCTCATGAACTCAAATTTCACACTCTTTTTCAAGAAAAAGGCATTCTTTCTTATCATTCTTGCCCTGAAACTCCTGAACAAAATTCTGTTGTTGAGAGGAAACCCAA

Capsella grandiflora (v1.1)

ID:

Scaffold11302_LTR-Copia_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1131

Start:

867  

End:

1997

Strand:

-

>Scaffold11302_LTR-Copia_74

CAGCTGCTTTACCCGACAACATCTCTGTAGGTGTCTTGCACTTGATACATGTGTGGGGTCCACGACTGATCAAGTAACATGATGTATTTACAGGTTCAGCCCAAAACCTCTTCTCCAAACCAGGATTagaaagcatacacctcgctctctccaacaAAGTCTGATTCATCCGTTCAGCTACACCATTCTGCTGTGGTGTATGTCTTCCTGTATGATGTCGAGCAACCCCTTCAATCTTACACAACTGATTGAACTCTAATGAACAAAACTCCAGACCATTGTCTGtccgcaaccgcttgatcttctttcctatttgatttttcaccaacgttttccactctCTAAAGTTCTTAAAAGCTTCACTTTTGTTCTGTAGCATGATCACCCACGTCTTCCTAGAGTAGTCATCAATTATTGAAACAAAATATATGTGACCTCCTAAAGACTCAACACGAGctgggccccaacaatcatagtgaatataatctaacgtgcctTTAGTTATATGAACAGCTGTAGTGAACTTACGACGATGAAGCTTCCCAAAAACACAATGTTCACAAAACTCAAGGCTCTTGACATCATGACCACATAGAAGATCTTCCTTTGATAAAATTTGCATCCCTCTCTCACTCATatgaccaagtgtcatatgccataacattTCTGCAGATGCAACATTCACTGAACTTGTAGCTGTGTGGCCTTGTAAGACATATATAGTACCACGTATGACACCCTTCAGAATGACATTAGAACCTTGAAAAACTTTATAACTCCGTCTCCACCTGAATATTTCATACCTCTACTATCAAGCAGACTCAAAGATATCAAATTCTTTTCCATTGACGAGACATGGCTGACATCGTTCAGTGTACAGAATCTACCATCATGAGCCCTGATCTTTATTGAGCCTATCCCAACAACCTGACTAGTAGAACTGTTAGCCATCTTGATGCAACCATTTTCTACCTGTGTATATATTGAGGACTACTCTCTTCTTGGACACATATGATATGACGCTCCAGTATCCATAATCCACacatcagagtcatgattctttccatcagtaaccagagcaaattcatcttcttctgacttggtgtcttgttctgctacagcagcagaccc

Capsella grandiflora (v1.1)

ID:

Scaffold11302_LTR-Copia_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

600

Start:

2227  

End:

2826

Strand:

-

>Scaffold11302_LTR-Copia_75

ctgtgaagatctgatctgagttgttccaaagtaattgtaactttattcactatgaatgactccacaaagttatcatatgatagtggtaaagattccaaaaaaAGCAACGCAACATCTTCATCTTCAACCTTAACATCACTATTACGCAGGTCAAGTAATATTGAGTTCAAGTCATCTAAATGATCTTTGAGTGGCGTACCTTCTTGCATCCTCAATGCAAAgaagcaacgtctaagcagcagcttgtgctttacagactttgtcatatacaaacattctaaccttttccataacttagcagtagtagtttcacctgaaacttcaacaatgacTTCATCTTCAAGGCACAACATGATTGTGGAATGTGCCTTCTCATCCATGAGAGCCATCTCAACATCATCACCCTTCCCCTTGCTGTCTTTCGATAAGGGTGcccataatccCTGTTGCTTTAACAGAGCTTGCATCGTAATGTGCCACAGACTGAAACTGTTTTTCGCAGAAAACTTATCGATCTTCACGTTCATCACAGACATCTTCTCACAAAAATTTCAACAGCGGAATTCCCAAAACCGTAAtctgcactaatcttcttctgca

Capsella grandiflora (v1.1)

ID:

Scaffold11302_LTR-Copia_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

261

Start:

3036  

End:

3296

Strand:

-

>Scaffold11302_LTR-Copia_76

TGTTATAACTGATGTGAGTAAAATAGCATAAACGTAAGAACACAACACAAATTTAACGTGGTTCACCAACACTTGCTGTTGGCTACGTCCACGGGCAAagagagactttTTTACTGGAGAAACAACAAAATATTCAGAATACAATAAGAGGCTAGGTTAAGGAGAATACTTATAGGGAATAGTCTAGGAATAAATCCTAGTTAACCAAAACGGATTGGGCCTAAAGTCAtgggcccaatCCTATTCAAGTCATATCCAACA

Capsella grandiflora (v1.1)

ID:

Scaffold1131_LTR-Copia_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

309

Start:

818  

End:

1126

Strand:

+

>Scaffold1131_LTR-Copia_77

ATCACGTTGGTCTTTTACTGATTGGTGTATTCAGTTAGGTGGTTTAGCAATTTCGTGGAAGTCACATTAACACGAGTGGAATCTCGTTCTTCGTCTGAAGCATGAATACCGTGCAATGGCCGATACAGTGACTGATATTCTCTGGAACAGTGAGTTGTTGGTAATGTTTGGGGTGGATTTTTCTGAGGCAATACATTCACTGATCTTTCAGCAATTCACCTTACTGCAAACTCAGTTTTCTATGAGCTCACCGAACACGTAGAGAAGGATTGCCATTTCATTAAAAACAAGAGTACCCGCGATATTGTT

Capsella grandiflora (v1.1)

ID:

Scaffold11333_LTR-Copia_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

190

Start:

754  

End:

943

Strand:

+

>Scaffold11333_LTR-Copia_78

TGATTCATAAGTTTAATACTCTGTTTATTTGTATTTTTTATCTACAAGTCTAAAAACCAAACAAACAACTATTTTCATTTTAGCTAAGAACGAGTCTCGAAAATCATCACAGTATTTTGCTATTTGTGGATCGATCCCGAATATACTACCTTGCAGTTAAGTGTATCAGTTTAACTACTCGAGCAATCAA

Capsella grandiflora (v1.1)

ID:

Scaffold11385_LTR-Copia_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1532

Start:

1  

End:

1532

Strand:

-

>Scaffold11385_LTR-Copia_79

TGCTTTATTATTACTTATAGGAAAAACCTCTCGAGTTTGTTTTGCTCTAAAACAGATGTCACAAGAGCGAGAACTAAAAGATAATTCAGAACCAGAAATCATAGGTAAAGCCGAAATTGCAGAAAAACTAGGATGACCCAACCGTTGATGCCACAAAGCTTGATCAGAAGAGACACTAACTGTGTGTATTTTTGCAGTCGCAACATCCGTCAAATAATACACCCCATCACGCTCTTCACCTCTTCCAATCAAagtcctcgaaaaacggtcctGTAAAACACAAATTGTATCAGTAAACGTAGCCATACACTTAGTTTGCTTGACAATTTTAGAGACTGAGATCAAAGTGCAATTCAAAGTAGGCACAAAGAGAACATTAGTGAGGGAAACACTATCCGAAAGAGGGAACTCTCCCATGCTCAAAGCAAACGTCTTGCTTCCATCCGCAAACCCAATAGAACAAGGTGGGATGGAGACAACGTTAACCAGAAGTGATAGACGACCAGTCATATGATGAGAAGCCCCTGTATCAAGAATGACATCCCCAAACTGCATCTTACCAGACAATTTGTCAGACGAGGCACTAGACGTTTTCTCTTGAATAAATTGAGAGAGTGCCCGAAGTTGGTCTTGTGTAAACTCTGGAAACGGAACAGAAGAAGGATTTGAACTTGTAGCGTGGGCTGTGGAGACTTGACCCCGACCACGACCAGAACCAGCTCCGCGTCCACCACGACCCCGACCATTAGAGCCTCGACCTCCCCCATTACGTTCAGTCCACCAATCGGGGAAGCCAACAATGGACCAACAATCTTTCTTCTCATGCCCCGTTCGTCCACAATGAGAGCACTCAACCGGACGTGTCTTGATTATAGAAGACTCAGCACGAGGACCAGACGACGAGTcagtgccagagGAGACTTGTCGTGTGACAAAACCAACAGCGTCCTGTCGCTCCTCTTGAAGACGTGAAGAGCCGATCCTTTGTTCTTCTCGAATAACtttagagtaagCAATACCTAGCTTTGGTAGAGGATCCATATTGAGAATACTTGTACAAATTCCCCCAAACCGTGAATCATCAAGACCCATGACAAATTGATGTAGCTTCTCGTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAACTCTTCCCAAAGCTTAGACAACCGGCCGTAATAATCAACCACTGTTTGCCCGTTTTGTCGACAAGAAGCTAATTGGGATTTGATTtgatgaatacGAACATTGTTACTCACAGAGAAACGTTCTTTTAGTTCTTCCCATAAAAGATGTGAATCAGAGATGAAAGTAACTGTTGATTTAACATGAGGTTCAatggaggctcgGATCCAACCAACAATCATGGAATTCACTGTTTGCCAATTCTCATAATCAGGATCTGTTTCGGGTGGTTCTGGGATCGTACCCTTGATAAAACCAGTTTTGCGTTTGGCTTGTAAAGCGTTAAACATCTC

Capsella grandiflora (v1.1)

ID:

Scaffold114_LTR-Copia_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

126

Start:

112851  

End:

112976

Strand:

+

>Scaffold114_LTR-Copia_80

TGTTGTGAAAGTCAAAAGAACGCAacaacatttaaCATATGAGTAAAATGTTTTTCATGTTTTTATTATTTATTATTTATCTGGAACCTATTGTCGCTATGTACACATAATAATTTACTTTTTTAC