Boechera stricta (v1.2)
ID:
Scaffold13129_LTR-Cassandra_41Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
157Start:
100202End:
100358Strand:
->Scaffold13129_LTR-Cassandra_41
GTCACACATCCTGAAAAGTGAAGTTATTCTACCTCAAACATGCTTAGATGTGAACTTTTCTTAGGAAAAGTTTTTAAAAAAAAAGTGCAATTCAATAATATATGTAGCCAAGTAACCTCTTCTTATGTACTACTATATTTCTTATTAATCGGGGTAT
Boechera stricta (v1.2)
ID:
Scaffold13158_LTR-Cassandra_42Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
353Start:
1144956End:
1145308Strand:
->Scaffold13158_LTR-Cassandra_42
TGTAACGCCCCAACCGCCCCCGTCCGTGAACCCACGACCACTTTGGCCTATGGGCCTACGGTCATCCGACGGCCGGTTCGTTACTTCTGGAGGCTTTAAAgacttgtttaCCGACCCTACAAATCACCACGTGATCTTTTCCCGTGTTTGGTCCTCACTCACACGGTACCGGAAATTACTTCCCGATAGGTCACCCGTCTTTAAATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCGAGATGGTCAACCGAAAAGATAAGTGCACtttggtgacatAGGTAGCCAAATCAATTCTTTTAAGCTCTCCTCATGCACCACCAAATTTCCCGATTCCGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold13158_LTR-Cassandra_43Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
339Start:
1531272End:
1531610Strand:
+>Scaffold13158_LTR-Cassandra_43
TGTAACACCCCATGTTGGAAATATGGTGGTGCATGAGGAGAGTTTAAAAAAATTGATTTAGCCACCTATGTTACCAAAGTGCATTTATCTTTTCGGTTAACCATCCCATGAGAACTCCAGAGTTAAACGTGCTTGAGTTGGAACAATTTAAGAATGAGTAATCTATCGGGAAGTGATTTCCGATGCCGTGTGAGTGAGGACAAAAcacagaaaaagATCACGTGGTGATTTGTAGGGTCGGTAAACAAGTCTAAAGCCTCCAAAAGTAATGCACCGATCGTCGGCCGAGGGTAGGACCCACGGGCTGGGCCCATAGACGGTGGCGGTCGGGGCGTTACA
Boechera stricta (v1.2)
ID:
Scaffold13223_LTR-Cassandra_44Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
321Start:
437End:
757Strand:
->Scaffold13223_LTR-Cassandra_44
TGTAATGCCCCAACCACCACAATCTGTGGGTCCTCACGTTCTCTTTCGTCCCGTGAACTCCACCTGTTAGTGCGCTATTCTAAGAGGCTTAAAACAATTGTTTATTGTCCCTATGCTATATTTTCCTGTATTTTTTTCTCACTTGCACGGTCCTGAAAGTCAGTTTTCACTATGTCACATATCCTTTCTTTACTCGAGTTCAAACTCACAAGTTTTTAAGGACAAATTACATAAAATACCAGTGCACTTTGGTAACATAATTAGCCAAATAATTTGTTTTAAGTCTCTCCACATGTTCCACCTTAAAATCGGGGAGTTGCA
Boechera stricta (v1.2)
ID:
Scaffold13223_LTR-Cassandra_45Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
105Start:
757End:
861Strand:
->Scaffold13223_LTR-Cassandra_45
ACTCACCCTGACTCAAAGAGCGCAATATCCTCGTTTCTTACCAAGTTCGTCACAGTGTGAGGCGACATGTCTCCACACTCGTCTGGTTTTGGCTCTGATACCACT
Boechera stricta (v1.2)
ID:
Scaffold13223_LTR-Cassandra_46Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
314Start:
896End:
1209Strand:
->Scaffold13223_LTR-Cassandra_46
CTCTCTCAGCCTATGGGCCCAACCCTCGTTCGACGTCTAGTCTGCTATTTTGTAAGGCTCGAAAGACCTATTAAACTACCCTGAAAATCAACACGAGATCTTTCCCCATGTTTTCTCCTCACTTGTACGGTACTCGAAATCAATTCCTAGTATCATCCAACCTCCATTACTCTTACTTCATACACGTTAAACTCTGGATGTTTGTTAAGACAAATTAAGAAAAAGATAAGTATACTTTGTCACATAGTTAACCAAATCAACTCTTTCAAACCTCTCCACATGCACCACCATATTTTAGAAAACAGGGTGCTGCA
Boechera stricta (v1.2)
ID:
Scaffold13223_LTR-Cassandra_47Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
262Start:
1237End:
1498Strand:
->Scaffold13223_LTR-Cassandra_47
GTGGACCTCCTTGTCCTCCCTCTCCTTATGGTCTTATCCTCTTATAACGGATGGTGCGCTAATCTAGAAGGCTTGAAAGAATTGTTTATTCTCCATACAAATCACCACACGATTTTCTCCGGACTTTTGTCCTCGCATGGTACAGGAAATCACTTCTTATTAGGTCAACCATCCTTCCGTTACTCCATTTCAACCTTGGTTTTAATCTTGAATTTTGTCAGGATGCATTACGGAAATGATAAGTGCAATTTGGTGACATTGG
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_48Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
338Start:
139630End:
139967Strand:
->Scaffold13404_LTR-Cassandra_48
TAAGGCCCCGACCGCCACCGTACATGGGCCCAGCCCGTGGGCCCCATCCTAAGCCGACGGTCGGTGCATTACTTCTGgaggctttaaaGACTTGTTTACCGATCCTACAAATCTTCACGTGATCTTTCCCCGTGTTTTGTCCTCACTCACACGGTACCGGAAATCACTTCCTGGTAGGTCACCCATCCTGAAATTGCTCCAGCTTAAACACGCTTAACTCTGGAGTTCTCTCAAAGTGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGCGACCAAATCAATTCTTTTAAGCTCTCCTCATGCACCACCATATTCCCTACCTGAGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_49Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
113Start:
139969End:
140081Strand:
->Scaffold13404_LTR-Cassandra_49
TCACCCCTACTAACAGACCGCAACGTCCTCATTGCGCAGCCATACCGTCACCCCTTAACGGTGTGAGACCACCCACTTGTATCCACACTCGTCTGAGTTCGGCTCTAATACCA
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_50Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
343Start:
264919End:
265261Strand:
->Scaffold13404_LTR-Cassandra_50
TGTAACGCCCTAACAGCCCCCGTCCGTGGTCCCATGCCCACTCATGCCCACTCTCGCCCATCGGCCACACGCTCATTTGACGGCCAGTTCGTTATTTCTGGAGGCTATAAAGACTTGTTTACCGACCCTACAAATCACCATGTGATCTTTCCCCGTGTTTTGTCCTTACTTATACGGTACCGGAAATCACTTTCCAATAGGTCACCCATCCTTAAACTGCTCTAGCTCAAGCACGCTTAACTCTGGATTTCTCGGTTGACCTACTTTGGTGACATAGGTAGATAATTCAATTATTTTAAACTCTCCTCATGCACCACCAAATTTCTAGATTACGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_51Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
108Start:
265263End:
265370Strand:
->Scaffold13404_LTR-Cassandra_51
TCACCCACACTAACAGATCGCAACGTCCTCGTTGCATACCAAGACAGTCACCCTCGATAGCATGAGCCCTCTTGACTCCACGTTTGTTTGGGTTTGGCTCTGATACCA
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_52Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
224Start:
265373End:
265596Strand:
->Scaffold13404_LTR-Cassandra_52
TGTAACGCCCCAACCTCCCCCGTCCATGGTCCCATGCCCACTCTCGCTCACGGGTCCCACGCTCATTCGACGGCTAGTTCGTTACTTCTAGAGGCTTTATAGACTTGTTTACCAATCCTACAAATCACCACGTGATTTTTTCCCGTATTTTGTCATCACTCACACGGTACCGGAAATCACTTTCCGATAGATTACCCATTCTTAAATTGCTCCAGCTCATGCAC
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_53Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
340Start:
691261End:
691600Strand:
->Scaffold13404_LTR-Cassandra_53
AATGTCCCAACCACCACCGTCCGTGGACTCTCACACCCTCTCTCGGCCTGTGGATTGTCTGATGACCAATGTGCTATTTTAGGAGGTTCCAAAAAATTATTTGCTATTCCTATAAATCACCACAAGATATTTTTTCATGTTTTGTCCTCGCTTAAATGCTACTAGAAATTACTATCTAGTAGGTCGCTCATCCTGAAATTACTCCAACTCAAACAATTGAGGAATTTTGTGAAAATATTTGACCGAAAAAATAAGTGCAATTTGATAATATATGTAGCCAAATCATATATCTTAAGCGCTCCTCATACACCACCATATTTCCAGAAATTGAGATATTACA
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_54Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
107Start:
691602End:
691708Strand:
->Scaffold13404_LTR-Cassandra_54
TCATCCCAGTCACAAATCGCAAAGTCTTTGTTGCATACCAAGACCGTCACGTTCGATGGTGTGAACCCACATGTCTACACATTCGTCTGGGTTTGGCTCTAATACCA
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_55Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
294Start:
692402End:
692695Strand:
->Scaffold13404_LTR-Cassandra_55
CATGTGCCCTCACACCAGTAGTGGGCGGTGTGCTACTCTCGAAGACTCAAAAGACTTATTTATAATCACCACTAGATCTTTTCCCATATTTTATCTTCATCCATATGGTACTAAGAATCACTTTCTGACATATCATCCATTATAAAAACGCTCAGTTGAAGCACGTTTAACTGTAGAATTCTGTTAGGATGATTGACGGAAAAGATAAGTCTACTTTAGTGACATATTTAACCAAATCTTTTCTCTTAAACTCTTCTCATGGACCTTCATATTTTCTGAAATCGAAATATTACA
Boechera stricta (v1.2)
ID:
Scaffold13404_LTR-Cassandra_56Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
325Start:
780788End:
781112Strand:
->Scaffold13404_LTR-Cassandra_56
TGTAACGCCCCGACCGCCACCGTCCATGGGCCCAACCCGTGGGCCCACTCTCGGCTGGCGGTCGGTGCATTATTTATGGAGGCTTTTAAGACTTGTTTACTGACCCTACAAATCACCACGTGATCTTTCTCCGtgttttgtccTCACTCACACGGTACCGGAAATCACTTTCCAGTAGGTCACCCATCCTGAAATTGCTCCAGCTCAACCACACTTAACTCTGGAGTTCTCTCAGAGTTAAGTGCACTTTGGTGACATAGGTGACCAAATCAATTCTTTTAAGCTCTCTTCATGCAACACCATATTCCCAACCTGAGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold13671_LTR-Cassandra_57Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
325Start:
738584End:
738908Strand:
+>Scaffold13671_LTR-Cassandra_57
GAAATTTGGTGGTGCATGAGGAAAGCTTAAAAGAATTGATTTGGCTAcctatatcacCAAAGTGCACTTATCTTTTCGGTTATCCATCCCGAGAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGCAATTTAAGGATGGGCGACCTATCGGAAAGTGATTTCTGATACCGTGTGATTGAGGACAAAACACGGGAAAAGATCACGtggtaatttgtAGGGTCGGTAAACAAGTCTTTAAAGCCTCTAGAAAGAACGAACCGGCCGTCGGATGAACGTGGACCCATGAACGAATGTAGGCGTGGGACCGGGAAGGGGGGGATGGGG
Boechera stricta (v1.2)
ID:
Scaffold14419_LTR-Cassandra_58Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
104Start:
188636End:
188739Strand:
->Scaffold14419_LTR-Cassandra_58
TCAGGATGCATTACGGAAATGATAAGTGCAATTTGGTGACATTGGTTGTCAAATTAATTCTTTTAAACCTACATGCATCACCATATTTCAGAAATCAAGGTGTT
Boechera stricta (v1.2)
ID:
Scaffold14419_LTR-Cassandra_59Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
304Start:
188747End:
189050Strand:
->Scaffold14419_LTR-Cassandra_59
GTAACGCCCCATCACCACTGTTTGTGGGCTCCTACGCCTTCTCTCAGACTGTGGACCCCACGACCAATGTGCTATATTGGAAGGCTCGATTTTACTTTCCCTACAAATAACTACAAGATACTTGTGTTTTGTTCTCACTCATACGATACTTAGATCACTTCCCAGTAGGTCACACACTCGTTTATTACTCCAGCTCAAACACACTTAGCTCAAAAGATCAGTGCACTTTCGTAACATTGATAGCCAAATCACTTCTTTTAAGCATCTTCATATGGGCTATTATATTTTCGTAATCGGGATGTTA
Boechera stricta (v1.2)
ID:
Scaffold14419_LTR-Cassandra_60Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
84Start:
189073End:
189156Strand:
->Scaffold14419_LTR-Cassandra_60
AACATCCTCGTTGCGTACCACGACTGTTATCCTCGACGATGTGAGTCTACATGTCTCCACGCACTCATTTGCATTTGGCTCTGA