Boechera stricta (v1.2)
ID:
Scaffold18351_LTR-Cassandra_81Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
341Start:
293492End:
293832Strand:
+>Scaffold18351_LTR-Cassandra_81
TGTAACACCCTAGGTTGGAAATATGGTGGTATATGATGAAAGCTTAAAAGAATTGATTTGGCTACCAATGTCATCAAAGTGCACTTATCCTTTTGATCAAACACCCTGGGAGAACACCAGAGTTAAGCGTGCTTGAGCTGGAGCAATTTCATGATAGGTGACCTCCCGGGAAGTGATTTTCGGTACCATATGAGTGAAGACAAAACACAGAAAAATATCACGTGGTAATTTGTAGGGTCGGTAAACAAATCTTTAAAGCCTCCAGAAGTAATGCATCGACCGTCAGCCGAGGATGGGGCCCACAGGCTGGGCCCATGAATAGTGGCGGTCGGGGCATTACA
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR-Cassandra_82Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
353Start:
463074End:
463426Strand:
+>Scaffold18351_LTR-Cassandra_82
TATAACATCCCGATTTCAGAAAATATGGTGGTGTATGAGGAGAAATTAAAAAAATTGATTGTCTACTTATGTCACCAAAGTGCACTTATCTTTTCGGTCAAACATCCTGAAAGAACTCCATAGTTAAGCGTGCTAGAACTGGAACAGTTTTAAGATGGGTGACCTACCGGAGAGTGATTCCCAATACCGTATGAATGAGAACAAAACATTGGAAAAGATATTGTGGTGATATTTAGGATTGGTAAATAAATATTTATAGTCTCTCGTAAGGTGCACACCGACCGTTGGACGAGGATGGTGATAGCCCATATAGGACATGATGATCCACATCTAGTGGTTGTCAGGACATTACA
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR-Cassandra_83Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
339Start:
1582367End:
1582705Strand:
+>Scaffold18351_LTR-Cassandra_83
TATAACACCCCATTTTCTGGAAATATGATGGTGCATGAGGAGAACTTAAAAGAATTGATTTGGCTACCTATGTCACCAAAAGATACTTATCTTTTCGGTCAAACATCTCAAGTTAAGCGTGTTTGAGCTGGAGCAATTTCAGGTGACCTATCAGGAAGTGATTTCCGGTACCGTATGAATGAGGACAAAACACGAGGAAAGATCACGTGGTGATTTGTAGGGTTGGTTAATAAGTCTTTAAAGCCTCCAAAAGTAGCAAACCGACCGTCATATGAGGGTGGAACCCATAGACCGAGAGAGTGTGTGGGGCCCACAGACGATGGCGGTCGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR-Cassandra_84Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
341Start:
2023713End:
2024053Strand:
->Scaffold18351_LTR-Cassandra_84
TGTAACGCTCCGACCGCCATCGTCCATAGGCCCAGCCCGTGGGCCCTCACCCTCGGCCGACGGTCGGTGCATtacttctagaGGTTTTAAAGACTTGTTTACCGACCTTACAAATCACCACATGATATTTTTCCTGTTTTGTCCTCACTCACACGGTACCGGAAATCACTTTCCGGTTGATCACCCATTCTGAAATTGCTCCAGCTCAAGCACGTTTAACTCTGGAGTTCTCTCATAGTGTTTGACCGAAAAGATATGTGCATTTTGGTGACATAGATGACCAAATCAATTCTTTTAACTTCTCCTCATGCACTACCATATTCCCAACCTGGAGTGTTATA
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR-Cassandra_85Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
336Start:
2403323End:
2403658Strand:
->Scaffold18351_LTR-Cassandra_85
TGTAACACTCCGACCGCCATTATCAGTGAGTTCCCATGTCTTCTCTCGGCCTGTGGGATCCACCTTCGCTAGATGACCGGTACGCTATATTCGGAGGTTTTAAAGACTTGTTTACCGACCGTATCACCAAAGTGCACTTATCTTTTCCTGTGTTTTTCCTTGCTCATACGGTACCAGAAATCACTTTTTGGTAGGTCACTCATCCTGAAATTGCTCTAGTTCAAGTACGCTTAACTCTGAAATTCTGACAAGATGTTTCACTGAAAAGATAAGTGCACTTTGGTGATATAGATAACCAAATCAAATTTTTTATATTCTCTTTATGCACCACCATAT
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR-Cassandra_86Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
110Start:
2412044End:
2412153Strand:
+>Scaffold18351_LTR-Cassandra_86
AGTGGTATCAAAACCGAGCTCAAACAAGTGTGGATTCAAATGTGTTCACACTGTTGGAGTGGCGATCTGGTTTGCAACAAGAACCTTTGTGATCTGTTAGTGTGGGTGAA
Boechera stricta (v1.2)
ID:
Scaffold18351_LTR-Cassandra_87Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
103Start:
2412155End:
2412257Strand:
+>Scaffold18351_LTR-Cassandra_87
GTAATACCATGATATTTGAAACTACGGTGGTGCATAAGAAGAATTTAAAATAATTGAATTGGCTACTTATGTCATCAAAAATGCACTAATTTTTTCGGTCAAA
Boechera stricta (v1.2)
ID:
Scaffold18901_LTR-Cassandra_88Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
334Start:
63718End:
64051Strand:
->Scaffold18901_LTR-Cassandra_88
TATAATACCCTGACCTCCACCTTGCGTGGGCACCACGTCTTCTCTTAGTCCGTGGGTCTCATCCTCGTCTAACGGCCGGTTCGCAGCTTCCATAGGCTTTAATGACTTGTGTACTGACCCTATAAATCACCATGTGATTTTTCCCTTGTTTTTTCCTAACTCGCACGGTACCGGAAATCACTTTTCGATAGGTCATCAATCTTGAAATTGTTTCAGTCCAAGCACGCTTAAGTTTGGAGTTCTCTGAGGATGTTTGATCTAAAAGATAAGTGCACTTTAGTGATATTGTTATCCAAATCAATTCTTTTAAGTTCTCTCCATATACCACCATATT
Boechera stricta (v1.2)
ID:
Scaffold18901_LTR-Cassandra_89Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
87Start:
64071End:
64157Strand:
->Scaffold18901_LTR-Cassandra_89
CAATGTCCTCGTTGCGTACGAAGACCATCACCCAAACGATGTGAGCCCGCCTGACTCCACACTTGTTTGGTTTTGGCTGTGATACCA
Boechera stricta (v1.2)
ID:
Scaffold18901_LTR-Cassandra_90Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
354Start:
64162End:
64515Strand:
->Scaffold18901_LTR-Cassandra_90
TGTAATGCCCGACCTCCACTTTCTGTGGGCCCTAAGCTCTCTCTCAGCGTGTGGGCCCCACCCTCGTCCGTTGGCCGGTTCGCTATTTCTGGAGGTTTTAAAGACTTGTAACCGACCCTTTAAATCACCACGTGATCTTTCCCCATGTATTTTCTTCACTCCTACGGTATCGGAAATCACATTCCGACAGGTCACCCATCCTAATTTGCTCCAGCCTAAGCACGCTTAACTCTGGAGTTATCTAAGGATGTTTGACCAAAAAAATTAAATGCATTTTGATGACATAGGTAGCTAAATCAATTCTTTTATGCTCTCCTCATACACCACCATATTTTCATATATCGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR-Cassandra_91Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
283Start:
552181End:
552463Strand:
->Scaffold19424_LTR-Cassandra_91
TGCAACGCCCCGACCGCCACCGTCCATGGGCCTAGCCCGTGGGCCCCACCCTCGGCCGACGGTCGGTGCATTACTCCTGGAGGCATTAAAGACATGTTTACCGACCCTACAAATCACTACGTGATCTTTTCTCGAGTTTTTTCCTCACTCACATGGTATCGGAAATCACTTCCCGGTAGGTCACCCATCCTGAAATTGCTCCAGCTCAAGCATGCTTAACTCTGGAGTTCTCTCAgggtgtttgaCCGAAAAGATAAGTGCACTTTGGTGACATAGGTGGTCA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR-Cassandra_92Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
261Start:
553421End:
553681Strand:
->Scaffold19424_LTR-Cassandra_92
GAGGCTTTAAAGACCTGTTTACCAACCCTACAAATCACCACGTGATATTTCCCCTTGTTTTGTCCTCACTCACACGGTACCGGAAATCACTTCCCAGTAAGTCACCCATCCTGAAATTGCTCCAGCTCAAGCACGCTTAACTCTGAAGTTCTCTCAGGGTGTTTGATCGAAAAGATAAGTGCACTGTGGTGACATAGTTGGCCAAATCAATTCTTTTAACTCTCCTCATGCACCGCCATATTCTCAATCTGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR-Cassandra_93Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
115Start:
2584003End:
2584117Strand:
->Scaffold19424_LTR-Cassandra_93
AGCTCAAAACACATTTAACTGTGAAGTTATCGTATGATTAGTTACAAAATTAGATAGATGTTTTTTTGGGTGAGATATGTAGTGAGATCGATTCTTTTTAACATTTTCACGTGCA
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR-Cassandra_94Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
324Start:
2834733End:
2835056Strand:
->Scaffold19424_LTR-Cassandra_94
AACGCCCCGACCGCCACCGTCCATGGGTCCAGCCTGTGGGCCCCAACGGTCGGTGCATTACTTCTGAAGGCTTTAAAGACTTGTTTACCGCCTACAAATCACCACGTGATCTTTTCCCGTATTTTGTCCTCACTTACACGGTACCGAAAATCACTTCCCGGTAGGTCACCCATCCTGAAATTGCCCCAGCTCAAGTACGCTTAACTTTAGAGTTCTCTCAGGGTGTTTGACCGAAAAGATAAGTGCACTTTGGTGATATAGGTAGCCAAATGAATTTTTTTAAGCTCTCCTCATGCACCACCATATTCCAACCTGGGGTGTTAC
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR-Cassandra_95Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
341Start:
4100094End:
4100434Strand:
->Scaffold19424_LTR-Cassandra_95
TGTAGCGATCCAACCATCGTCATCTGTGAACCATGCATGCTCTCTCGACTTGTGGGTTCTATCTCGTATGACAGCTAGTACGCTATTCCAAGAATTTTAAAAGATTTATTGACTATCTCTACATATCACCAACAAGATATTTTCTCGAGTTTTGTTTTCACTTACATAATACTTAAAATTACTTATTTGGTAATCTATTATGAAATCGCTCCAACAGGAAAATGTTTATATGTGAAGTTCTCTCATAATGACTTATACAAAAAAGTGTAATTTGCTGATATAGGTAAGTCAATCAATTTTAGTAAACTCACTTTGTACACCATCATATTCCATAAACCAGG
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR-Cassandra_96Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
261Start:
5077551End:
5077811Strand:
->Scaffold19424_LTR-Cassandra_96
AAAGACTTGTTTACCAAACCTACAAATCACCACGTGATCTtttttcgtgttTTGTCCTCACTCACACGGTACCGGAAATCACTTTCCGATAAGTCACTCATCCTTAAATTGCTCCACCTCAAACACTCTTAACTCTGGAGTTGGAGTTCTCTCAGGATGGTCAACCGAAAAGATAAGTGCATTTTGGTGACATGGGTACCCAAATCAATTATTTTAAACTCTTCTCATGTACCATCAAATTTCCAGATTCCGGGATATTAC
Boechera stricta (v1.2)
ID:
Scaffold19424_LTR-Cassandra_97Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
327Start:
6834368End:
6834694Strand:
->Scaffold19424_LTR-Cassandra_97
TGTAACGCCCCACTGCCCCCACCCCACGCCCACTCTGCCCCATGGGGATCCACGATCGTCTGATGGCTGGTTTGTTACTTTTGGAAGTTTTAAAGATTTGTTTACCGACCTTACAAATCACCACGTGATCTTTTCCCGTGTTTTGTTCTCACTCACACGGTATCGAAAATCACTTCCCGATAGGTTATTCATCCTGAAATTGTTCCAACTCAAACACCTTTTAACTCTGGAATTCTCTTGGGATGGTTAACTGAAAAGATAAGTGCACTTTGATGACATAGGTAGCCAAATCAATTCTTTTAAACTCTCCTCGTGCACCACCAGATT
Boechera stricta (v1.2)
ID:
Scaffold20055_LTR-Cassandra_98Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
103Start:
226144End:
226246Strand:
+>Scaffold20055_LTR-Cassandra_98
TGTAATATCCCAAATTATAGAAAATTAGTGGTGTGTGTTAAGAAAGTTAAAAGAATTATTGATTTGACTATATATCTCACTATTGTATACTTGTTTTTTCTGT
Boechera stricta (v1.2)
ID:
Scaffold2021_LTR-Cassandra_99Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
352Start:
117188End:
117539Strand:
->Scaffold2021_LTR-Cassandra_99
TGTAACGTCCCAACCGTCCCCGTCCGTGGTCTCATGTCCACTATGTCCCATGGGCCCCATGGTCATCCGACGGTCAGTTCGTTACTTCTGGAGGCTTTAAAGACTTGTTTACcgaccctacaAATCACCACGTGATCTTTTCCCGTGTTTTGTCCTCACTCACACGGTACCGAAATCACTTCCGATAGGTCACCCATCCTTAAATTGCTCCAGCTCAAACATGCTTGACTGTGGAGTTCTCTCGGGATGGTTAACCGAAAAGATAAGTGCACTTTGgtgacataggtAGCCAAATCAATTCTTTTAAGCTCTCCTCATGCACCACCAAATTTACAGATTCCGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold2021_LTR-Cassandra_100Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
183Start:
501915End:
502097Strand:
->Scaffold2021_LTR-Cassandra_100
GTTCGATGGCTAGTACGCTATTTCGAAATATTCGAAAGATTTGTCCAACGACTCTACAGATCATTTTGAGATTTTTTTTCCATATATTGTTATCACTCAAATTATACTGAAAATCAGTTCTCAGTAAGTAATACATTCTTAAATATTTGTTCAAACTCAAGCTAGATTAATTTTGGAGTTCTC