ID Class Order Superfamily Length Start End Strand View
Scaffold8111_LTR-Cassandra_261 RetrotransposonsLTRLTR-Cassandra1074034440450+
Scaffold8111_LTR-Cassandra_262 RetrotransposonsLTRLTR-Cassandra3564045240807+
Scaffold8819_LTR-Cassandra_263 RetrotransposonsLTRLTR-Cassandra341291780292120+
Scaffold8819_LTR-Cassandra_264 RetrotransposonsLTRLTR-Cassandra96292123292218+
Scaffold8819_LTR-Cassandra_265 RetrotransposonsLTRLTR-Cassandra341292220292560+
Scaffold8819_LTR-Cassandra_266 RetrotransposonsLTRLTR-Cassandra341969175969515-
Scaffold8819_LTR-Cassandra_267 RetrotransposonsLTRLTR-Cassandra113969517969629-
Scaffold8819_LTR-Cassandra_268 RetrotransposonsLTRLTR-Cassandra340969632969971-
Scaffold8819_LTR-Cassandra_269 RetrotransposonsLTRLTR-Cassandra35311605961160948+
Scaffold9638_LTR-Cassandra_270 RetrotransposonsLTRLTR-Cassandra3518421484564-
Scaffold9638_LTR-Cassandra_271 RetrotransposonsLTRLTR-Cassandra1078456684672-
Scaffold9638_LTR-Cassandra_272 RetrotransposonsLTRLTR-Cassandra3348467685009-
Scaffold9638_LTR-Cassandra_273 RetrotransposonsLTRLTR-Cassandra108225862225969+

< 10 11 12 13 14 > Total 14


Boechera stricta (v1.2)

ID:

Scaffold8111_LTR-Cassandra_261

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

107

Start:

40344  

End:

40450

Strand:

+

>Scaffold8111_LTR-Cassandra_261

TGGTATTAGAGCCAAACCTAGACAAACATGGAGTCAAGAGGGCTCAAGCTGTCGGGGGTGACGGTCTTAGTGCGCAATGAGGACGTTGCGATATGTTAGTGGGGTGA

Boechera stricta (v1.2)

ID:

Scaffold8111_LTR-Cassandra_262

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

40452  

End:

40807

Strand:

+

>Scaffold8111_LTR-Cassandra_262

TGTAACACCCCATAATTTAGAAATTTGGTGGTGCATGAGGAGAGTTTAAAAGAATTGATTTGGCTACCTATGTCACCAAAGTACACTTATCTTTCCGGTTAACCATCTAAAAAAAACTTTAGAGTTAAGTGCTTGAGCTGGAGCAATTTAAGGATGGTAACCTATTGAGAAGTGATTTCCTGTATTGTGTGAGTGATGACAAAACACGGAAAAGATCACGTGGTGATTTGTAGGGTCGCTAAACAAGTTTTTAAAATCTCCAGAAGTAACGAGTAACGAACAGGTCGTCGGATGAGCATGGAGCCCATGAGCGAAAGTGGCCGTGGGACCACATATGGGGGCGATTGGGGCGTTAC

Boechera stricta (v1.2)

ID:

Scaffold8819_LTR-Cassandra_263

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

341

Start:

291780  

End:

292120

Strand:

+

>Scaffold8819_LTR-Cassandra_263

TGTAACACCCCAGGTTCGGAATATGGTGGTGCATGAAGAGAGTTTAAAAGAATTGATTTGACcacctatgtcACCAAAGTGCACTTATCTTTTCGGTCAAAAACCCTAAGAGAACTCCAAAGTTAAGCATGCTTGTGCTAGAGCAATTTCAGGATGGGTGACCTACCGGAAAGTGATTTCCGGTACTGTGTGAGTGATTACAAAACTCACAAAAAGTTCACGTGGTGTTTTGTAGGGTCCGTAAACAAGTCTTTAAATCCTCTAGAAGTAATGTGCCGACCGTCGGCCGAGGGTGGGACCCACGGGCTGGGCCCATGGATGGTGGCAGTCGGGGCGTTATA

Boechera stricta (v1.2)

ID:

Scaffold8819_LTR-Cassandra_264

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

96

Start:

292123  

End:

292218

Strand:

+

>Scaffold8819_LTR-Cassandra_264

TGGTATCATAGCTGAACCTAGATGAGTGTCTCACACCGTTAAGGGGTAATGGTCTGGTTGCGCAACGAGGACGTTGCGATATGTTAGTGGGGGTGA

Boechera stricta (v1.2)

ID:

Scaffold8819_LTR-Cassandra_265

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

341

Start:

292220  

End:

292560

Strand:

+

>Scaffold8819_LTR-Cassandra_265

TGTAAcaccccaggttGAGAATATGGTGGTGCATGAACAGAGTTTAAAATAATTGATTTGGCCACCTATGTCAACAAAATGCACTTATCTTTTCGGTCAAACACCCTAAGAGAACTCCAGAGTTAAACGTGTTTGAGCTGGAGCAATTTCAGGATGGGTGACCTACCGAGAAGTGATTTCCAGTACCGTGTGAGTGAGAACAGAACTCGGAAAAAGATCACGTGGTGATTTGTAGGATCGGTAAACAAGTCTTTAAAAACTCCAGAAGTAATGCACCAACCGTCGGCCGAGGGTGGAGCCCACAGGGTGGACCCATGGATGGTGGCAGTCGAGGCGTTACA

Boechera stricta (v1.2)

ID:

Scaffold8819_LTR-Cassandra_266

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

341

Start:

969175  

End:

969515

Strand:

-

>Scaffold8819_LTR-Cassandra_266

TGTAACGCCTCGACCGCGACCATCCATGAGCCCAGCCCGTGGGCTCCACCCTCGGCCGACGGTCGGTGCATTACTTTTGGAAGCTTTAAAGATTTGTTTATCGACCCTACAAATAACCACATGATCTTTCTCCATGTTTCGTCCTCACTCACACGGTACCTGAAATCACTTCCCGGTAGGTCACCCATCCTTAAATTGTTCTAGCTCAAACACGCTTAACTCTCGAGTTCTCTCATGGTATTTAACCGAAAAGATAAGTGCACTTTGGTGACATaagtggccaaaTCAATTCTTTTAAACTCTCCTCATGCACCAACATATTTCCAACATGGAGTGTTACA

Boechera stricta (v1.2)

ID:

Scaffold8819_LTR-Cassandra_267

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

113

Start:

969517  

End:

969629

Strand:

-

>Scaffold8819_LTR-Cassandra_267

TCACCCCCACTAACAGATCGCAACGTACTCGTTGCGCAGCCAGACTGTCACCCCCTAACGGTGTGAGACAACCCACTTATCTCCATATTCGTCTGGGTTCGGCTCTGATACCA

Boechera stricta (v1.2)

ID:

Scaffold8819_LTR-Cassandra_268

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

340

Start:

969632  

End:

969971

Strand:

-

>Scaffold8819_LTR-Cassandra_268

TGTAATGCCTCGACCGCCACCGTCCATGGGCCCGCAACTGGACCCCACCCTCGGTCGACGGTCGGTGCATTACTTTTAGAAGCTTTAAAGACTTGTTTACCGACCTTACAAATCACCACGTGATCTTTCTCCGTGTTTTGTCCTCActcacacggtACCGGAAATCACTTCCCGGTAGGTCACCCATCCTGAAATTTTTCGAGCTCAAGCACGCTTAACTCTGGAATTCTCTCAGAGTGTTTGACCGAAAAGATAAGTGCActttggtgacATAGGTGGCCAAATTAATTCTTTTAAACTATCTTCATGCACCACCATATCTCCAACCTGGGGTGTTACA

Boechera stricta (v1.2)

ID:

Scaffold8819_LTR-Cassandra_269

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

353

Start:

1160596  

End:

1160948

Strand:

+

>Scaffold8819_LTR-Cassandra_269

TGTAACACCCCGAAATCTAGAAATTTAGTGGTGCATGAGGAAAGTTTATAAGAATTTATTTGACTATCTATTCACCAAAGTGCACTTATCTTTTCggttaaccatCCCGAGAGAACTCCAGAGTTAAGTGTGCTTGAGCTGAAGCAATTTAAGGATATGTGACCTATCGAGAAGTGATTTCTGGTACCGTATGAGTGAGGACAAAACACGGAAAAAGATCACGTGGTGATTTGTAGGATCGGTAAACAAGTCTTTAAAGCCTCTAGAAGTAACGAACCGGCCGTCGGATGAGCATGAGACCCATAGGAGAGAGTACGTGTGGGACCATGGACGAGAGCGATTGAGGCGTTACA

Boechera stricta (v1.2)

ID:

Scaffold9638_LTR-Cassandra_270

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

351

Start:

84214  

End:

84564

Strand:

-

>Scaffold9638_LTR-Cassandra_270

TATAACGCCCCAACCACCCCCCGTCCGCGGTCCCACGCCCACTCTCACCCATGGGCCCCACGCTCATCTGACAGTCTGTTCGTTACTTCTGAAGGTTTTAAATACTTATTTACTGAACCCTACAAATCACCACGTGATCTTTTCTCGTGTCTTCACTTACACGGTACCGGAAATCACTTTCCAATAGGTCATCCATCTTTAAATTGCTCCAACTCAAGCACGCTTAACTTTGGATTTCTCTCGGGATGGTTAACCGAAAAGATAAgtgcactttgGTGACATAGGTAGCCAAATCAATTCTTTTATGCTCTCCTCATGCACCACCAAATTTCCAAATTCCGGGGTGTTACA

Boechera stricta (v1.2)

ID:

Scaffold9638_LTR-Cassandra_271

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

107

Start:

84566  

End:

84672

Strand:

-

>Scaffold9638_LTR-Cassandra_271

TCACCCCCACTAACAGATcgcaacgtcctCGTTGCGCACCAAAACCGTCACCCCGACAGCATGAGCCCTCTTGACTCCACGTTTGTCTAGCTTCGGCTATGATACCA

Boechera stricta (v1.2)

ID:

Scaffold9638_LTR-Cassandra_272

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

334

Start:

84676  

End:

85009

Strand:

-

>Scaffold9638_LTR-Cassandra_272

TGTAACGCCCCAACCACCCCCATCTGTGGTCCCAAGCCCACTCTTGCCAATGGGCCCCATGCTCATCCGACGGTCGGTTCGTTACTTCTGGAGGCTTTAAAGACTTGTTTATCGAACCCTACAAATCACCACATGATCTTTTCTCGTGTTTTGTCCTCACTTACAAGGTATCAGAAATCACTTCCCGATAGATCATCCATCCTTAAATTGCTCAAGCTCAAGCACGCTTAACTTTAAAGTTCTTTCGGAATGGTTAACTGAAAAGATAAGTGCACTTTGGtgacataggtAGTCAAATCAATTCTTTTAAGTTCTCCTCATGCACCACCAAATT

Boechera stricta (v1.2)

ID:

Scaffold9638_LTR-Cassandra_273

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

108

Start:

225862  

End:

225969

Strand:

+

>Scaffold9638_LTR-Cassandra_273

CATGTTGTGATTTGTAAGATCGCTAAATAAGTATTTTGAGCCGGAGCAGTGCACCGCCAATCAGAAAAGGGTAAAGGCTACGGGCCGAGAGCAGGTTTGCAGGCCTAC