Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_21Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
110Start:
209901End:
210010Strand:
+>Scaffold12302_LTR-Cassandra_21
AGTGGTATCAGAGCAAACCCAGATGAGTGTGGAATTAAGTGAGTTCAAACCGTCTGAGTGATGGTCTTGGTAAGCAACGAGAACATTGCGCTATGTGAGTAGGGGTGAAT
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_22Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
275Start:
210010End:
210284Strand:
+>Scaffold12302_LTR-Cassandra_22
TGTAACACCCAATTTATGAAATATGGTGATACACGAGGAGAGTTTTAAAAATTTGATTTGACTACATATGTCACCAAAGTGTCTTTATCTTTTCGGTCAAACATCTAATCAGTTTAGAGTTAAGTGTGTTGTGCTGGAGCAAATTCAGGATGGGTGACTTACCGGGAAGTGATTTCTAGCACCGTGTGAGTGAGAACAAAACATGAGGAAAGATCCCATGGTGATTTTTAGGATCAGTAAACAATTTTTCGACCCTCTGGAAGTAGCGCATTGAC
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_23Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
131Start:
281423End:
281553Strand:
+>Scaffold12302_LTR-Cassandra_23
TGATAATTTGTAGGATCGGTAAACAACTCTTTCGAGTCTTCCAAAATAGCGCATCGACAATCAAACGAGGGTGAATTCATGAACAGTGAGAGGGTGTGAAACCCACATATGATGGCGGTCGGGATGTTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_24Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
161Start:
282879End:
283039Strand:
+>Scaffold12302_LTR-Cassandra_24
GAGTAGTAAAAAACATGGGAAAATTTTTAATGATGATTTGTAGGATCGGTAAACAACTCTTTCGAATCTCTAAAAATAGCACATCGATAGTCAAACGAGGGTGGGTTCATGAACAGAAAAATGGTGTGGAACCCGCATACGATGGCGGTTAGGGCATTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_25Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
280Start:
343104End:
343383Strand:
+>Scaffold12302_LTR-Cassandra_25
TGTAACACCCCAGGTTGGGAATATGGTGGTACATGAGGAGAGCTTAAAAGAATTGATTTGGCCATCTATGTCACCAAAGTGCACTTATCATTTCAGTCAAATACCTTGAGAGAACTTCAGAATTAAGCGTGCCTGAGCTACCGGGAAGTGATTTCCGGTACTGTGTGAGTGAGGACAAAACACGGGGAAAGATCacgtggtgattTGTAGGGTCGGTAAACAAGTCTTTAAAACCTCCAAAAGTAATGTACCGACCGTCGACCAAGGGTGGGGCCCATGG
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_26Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
113Start:
343409End:
343521Strand:
+>Scaffold12302_LTR-Cassandra_26
TGGTGTAAGAGCGGAACCCAGACGAGTGTGGAGACAAGtgggtggtctCACACCGTTAGGGGGTGACGGTCTGGCTGCGCAACGAGGACGTTGCGGTATGTTAGTTGGGGTGA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_27Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
339Start:
343523End:
343861Strand:
+>Scaffold12302_LTR-Cassandra_27
TGTAACACCCCAGGTTGGGAATATGGTGGTGCATGAGGAGAGTTTAAAAGAATTGATTTGGCCACCTATgtcaccaaagtgcacttaTCTTTTCGGTCAAACACCCTGAGAGAACTCCAGAGTTAAGCGTGCTTGAGGTGGAGTAATTTCAGGATGGGTGCCCTACCGGGAAGTGATATCCGGTACCGTCTGACTGAGGACAAAACACAGGAAAGGATCACGTGGTGATTTGTAGGGTCTGTAAACAAGTCTTAAAGCCTCAGAAGTAATGCACCGACCGTCGGCCGAGGGAAGGGCCCAAGGGCTGGGCCCATGGAAGGTGGCGGTCGGGGCCTTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_28Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
341Start:
496826End:
497166Strand:
->Scaffold12302_LTR-Cassandra_28
TGTAATGCCCCGACCGCCACCTTCAATTGGCTCAGCCCGTGGGCCCCACCCTCGGCCGACGGTCGGTGCATTACTTCTGGAGGCTTTAAAGACTTGTTTACCgatcctacaaATCACCACGTGATCTTTCCCCGTGTTTTGTCCTCACTCACACGGTACCGAAAATCACTTCCTGATAGGTCACCCATCCTTAAATTGCTCCAACTCAAGCACCCTTAACTCTGGAGTTATCTCGGGATGGTTAACCAAAAAGTTAAGTGCACTTTGGTGACATAGGTGGCCAAATCAATTATTTTAAACTCTCCTCATGCACCACAATATTACCAATCTGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_29Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
342Start:
589385End:
589726Strand:
->Scaffold12302_LTR-Cassandra_29
TGTTACGCCCCGACCGCCACCGTCCATGAGTCCAGCCCATGGGCCCCACTCTTAGCCGACAGTTCGGTGCATTATTTCTAGAGGCTTTAAGGACTTGTTTACCGACCCTACAAATCACCACGTGATCTTTTTCCGTATTTTGTCCTCACTCACACGGTACCGGAATCACTTTCCGGTAGGTCACCCATCCTGAAATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCAAGGTGTTTGACCGAAAATATAAGTGCACTTTGGTGACATAGATGGTCAAATCAATTTTTTTTAAGCTCTCTTCATGCACCACCATATTCCCAACCTAGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_30Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
113Start:
589728End:
589840Strand:
->Scaffold12302_LTR-Cassandra_30
TCACCCCCACTAAcagaccgcaacgtcctcgttgcgcaggcagaccgtcaccccctaacggtgtgagaccacCCACTTGTCTCCACACTCGTCTGGGTTCGGCTCTGATACCA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_31Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
143Start:
589843End:
589985Strand:
->Scaffold12302_LTR-Cassandra_31
TGTAACGCCCCGACCGCCACCATCCATGGGCCCATCCCGTGGGCTCAACCCTCGGTCGACGGTCGGTGCATTACTTTTGGAGGTTTTAAAGACTTGTTTACTGACCCTGCAAATCACCACGTGATCTTTTCCCGTATTTTGTC
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_32Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
258Start:
590607End:
590864Strand:
+>Scaffold12302_LTR-Cassandra_32
GGTGCATGAGAAGAACTTAAAAGAATTGATTTGGCtacctatgtcaCCAAAGTGCACTTATCTTTTTGGTCAAATACCCTGAGAGAACTCCAGAGTTAAGCGTGCTTGTGCTGGAGCAATTTCAGGATGGATGACCTACCGGGAAGTGATTCCGGTACCGTGTGAGTGAGGACAAAATACGGGGAAAGATCACGTGGTGatttgtagggTCGGTAAACAAGTCTTTAAAAGCTTCAGAAGTAATGCACCGACCGTCGG
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_33Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
123Start:
1723884End:
1724006Strand:
->Scaffold12302_LTR-Cassandra_33
TTAACTCTGGATTTCTCTTAGGATGTTTGATCGAAAAGTTAAATGCATTTTGGTGACATAGGTAGCCAAATCAATTAAACTCTCTTTATGCACCACCATATTTTCAGATATCGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_34Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
109Start:
1724008End:
1724116Strand:
->Scaffold12302_LTR-Cassandra_34
TCATCCCCACTAACAGATCGCAACATCCTCTTGCGTACCAAGACTGTCACCTCCGACGATGTAAACCCACTTGACTCCACACTCGTTTGGGTTTGGCTATGATATTATT
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_35Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
345Start:
1724117End:
1724461Strand:
->Scaffold12302_LTR-Cassandra_35
TGTAACGCCTTGACCACCACTGTTCGTGCCCCCCCCCCCcccccccccgcCCTCTTTCAGCCTATGGACCCAACTCTCGTCTTATGGTCAATATGCTACTTCCAGAGGTTTTAAATATTTTTTTTACCGACCCTACAGATCACCACGTGATCTTTTTGGAACCATAAATCATTTTCCGACAGGCAACCATCCTAAAATTGTTTCAGCTCAAGCACGCTTAACTTTGAAGTTCTCTCAAAATGTCTGACTGAAAAAATAAATGCATTTTGGTGACATAAGTAGTTGAATCAATTATTTTAACCTTTGTTCATACACCACCATATTTCCAGATATTGGGGTATTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_36Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
338Start:
2138161End:
2138498Strand:
->Scaffold12302_LTR-Cassandra_36
CCCCCATCCGTGGACCCACGCCCACTCTGGCCCATGGGCCCCACGCTCATCCGACGGTCGGTTTGTTACTTCTGGAGGCTTTAAAGACTTGTTTAccgaccctacaAATCACCACGTGATCTTTTCCCATGTTTTGTCCTCGCTCACACGGTACCGGAAATCATTTTTCTATAAGTCACCCATCCTTAAATTGCTCCAACTCAAGCACGCTTAACTCTGGAGTTCTCTCgggatggtcaaCCGAAAAGATAAGTGCACTTTGGTGACATATGTAGCCAAATCAATTCTTTTAAGCTCTCCTCATGCACCACCAAATTTTCAGATTCCGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold124_LTR-Cassandra_37Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
234Start:
636981End:
637214Strand:
->Scaffold124_LTR-Cassandra_37
TACAAAACAACACGACATATTTTACTGTATTTTGTCCTCAATCACACAGTAGTGGAAATCATCTTCTAGTAGATCATCCGTTCTAAAGATATTTCAGTTTAAACACACTTAACTCTGGAATTTTGTGAAGACGTGCTACGAAAAATATATGTGCATTTTGGTGATACAGGTAACCAAATCAATTCTTTTAAAAAATTTTGATGTACCACCATATTTCCTAAAATTAGGGTATTA
Boechera stricta (v1.2)
ID:
Scaffold12722_LTR-Cassandra_38Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
302Start:
275939End:
276240Strand:
+>Scaffold12722_LTR-Cassandra_38
TGTAACACCATGTAATCTAGAAATTTGGTGGTGCATGAGAAGAGTTTAAAAGAATTGATTTGGTCACCTATGTCATCAAAGTGCACTTATCTTTTTCGGTTGACCATCCCAAGAGAACTCAAGAATTAAGCGTGCTTGAGCTGGAGAAATTTAAGATGAGTTACCTATAAGTGAGGACAAAATACGGAAAAAGATCACGTGGTGATTTGTAAGGTTGGTAAACAAGTCTTTAAAGCCTCCAAAATTAACAAACCGACCGTCGGATGAGCGTGGAGCCCATGGGCCAGAGTGGACGTGGGACC
Boechera stricta (v1.2)
ID:
Scaffold12722_LTR-Cassandra_39Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
323Start:
285834End:
286156Strand:
+>Scaffold12722_LTR-Cassandra_39
TGTAACACCATGTAATCTAGAAATTTGGTGGTGCATGAGGAGAGCTTAAAGTAATTGATTTGGCCACCTATGTCACCAAAATGCACTTATCTTTTCGGTTGACCATCCCGAGATAATTCTAGAGTAAAGCGTGCTTGAGTTAGAGCAATTTAAAATGGGTGATCTATCGAGAAGTGATTTCTGGTACCGTGTGAGTGAGGACAAAACCCGGAAAAAGATCAGGTGGTGATTTGTAGGGTTAGTAAACAAGTCTTTAATGCCCCCAGAAGTAACGAACCAACCGTCGGATGAGTATGTGTGGTTCTAATGAGGGCGGTTGGGGC
Boechera stricta (v1.2)
ID:
Scaffold12722_LTR-Cassandra_40Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
171Start:
360579End:
360749Strand:
->Scaffold12722_LTR-Cassandra_40
CTCACTTACATAGTACAGCAAACCACTTCATAATAGGTCATTTATCCTTAAGTTGATCTATCCTAAGGAGATTTAAGTATGGAGTTCTCTATAAGTGAGTTAAAGAAAATATAAGTGCAACTGGTATTATTGACAGTCAAATCAATAATTTTAAATATCTTCACACACTAC