ID Class Order Superfamily Length Start End Strand View
scaffold11275|size399_rRNA_41 RetrotransposonsRet_otherrRNA3991399-
scaffold11278|size399_rRNA_42 RetrotransposonsRet_otherrRNA3991399+
scaffold11288|size399_rRNA_43 RetrotransposonsRet_otherrRNA2381238+
scaffold11290|size399_rRNA_44 RetrotransposonsRet_otherrRNA3991399+
scaffold11294|size399_rRNA_45 RetrotransposonsRet_otherrRNA3991399+
scaffold11311|size399_rRNA_46 RetrotransposonsRet_otherrRNA3991399-
scaffold11322|size399_rRNA_47 RetrotransposonsRet_otherrRNA38713399+
scaffold11328|size399_rRNA_48 RetrotransposonsRet_otherrRNA3991399+
scaffold11341|size399_rRNA_49 RetrotransposonsRet_otherrRNA3991399-
scaffold11345|size399_rRNA_50 RetrotransposonsRet_otherrRNA3991399+
scaffold11351|size399_rRNA_51 RetrotransposonsRet_otherrRNA3991399-
scaffold11363|size147900_rRNA_52 RetrotransposonsRet_otherrRNA116180295-
scaffold11366|size399_rRNA_53 RetrotransposonsRet_otherrRNA3991399-
scaffold11368|size399_rRNA_54 RetrotransposonsRet_otherrRNA3991399+
scaffold11372|size399_rRNA_55 RetrotransposonsRet_otherrRNA114250363+
scaffold11378|size399_rRNA_56 RetrotransposonsRet_otherrRNA987104+
scaffold11378|size399_rRNA_57 RetrotransposonsRet_otherrRNA154246399+
scaffold11383|size399_rRNA_58 RetrotransposonsRet_otherrRNA3991399+
scaffold11391|size399_rRNA_59 RetrotransposonsRet_otherrRNA3991399-
scaffold11392|size399_rRNA_60 RetrotransposonsRet_otherrRNA3991399-

< 3 4 5 6 7 > Total 165


Boechera retrofracta (v1.0)

ID:

scaffold11275|size399_rRNA_41

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11275|size399_rRNA_41

ATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCGGGTACAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTG

Boechera retrofracta (v1.0)

ID:

scaffold11278|size399_rRNA_42

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11278|size399_rRNA_42

TTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCACACCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCGTCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGTGGTTCGCCGCCCGCGACGTCGCGAGAAGTCCACTAAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGA

Boechera retrofracta (v1.0)

ID:

scaffold11288|size399_rRNA_43

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

238

Start:

1  

End:

238

Strand:

+

>scaffold11288|size399_rRNA_43

AATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGTGGTTCGCCGCCCGCGACGTCGCGAGAAGTCCACTAAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGT

Boechera retrofracta (v1.0)

ID:

scaffold11290|size399_rRNA_44

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11290|size399_rRNA_44

GCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGTAAGGCGCAAGGAAGCTGATTGGCGGGATCCCTCGCGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGATCTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGGACGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGC

Boechera retrofracta (v1.0)

ID:

scaffold11294|size399_rRNA_45

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11294|size399_rRNA_45

TTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCGCTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCTATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCAGTTCCGAACCCGTCGGCTGTCTGCGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTTCTCTCGGGAGCTTT

Boechera retrofracta (v1.0)

ID:

scaffold11311|size399_rRNA_46

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11311|size399_rRNA_46

GAAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGACCAGGAGCGTATCGCCGACCGAAGGGACGAGCCGACCGGTGCACACCGAAAGGCGGACCGGGCGACCCATCCCAAGGTTCAACTACGAGGTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTG

Boechera retrofracta (v1.0)

ID:

scaffold11322|size399_rRNA_47

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

387

Start:

13  

End:

399

Strand:

+

>scaffold11322|size399_rRNA_47

GCGACCCCAGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACGTCTTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAG

Boechera retrofracta (v1.0)

ID:

scaffold11328|size399_rRNA_48

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11328|size399_rRNA_48

GTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGGCCGGCTTCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGATCACACCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGCGAAGTGTTCGGATCGCGGC

Boechera retrofracta (v1.0)

ID:

scaffold11341|size399_rRNA_49

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11341|size399_rRNA_49

GGCGGCGGGCGCATGCGTCGCATCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATCGCGACGCGGGCATCAGTAGGGTAAAACTAACCTGTCTCACAACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACTCCTCTAGCTTCAAATTCCGAAGGTCTAAAGG

Boechera retrofracta (v1.0)

ID:

scaffold11345|size399_rRNA_50

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11345|size399_rRNA_50

GTTTTACCCTACTGATGCCCGCGTCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGATGCGACGCATGCGCCCGCCGCCCGATTGCCGACCCCCAGTAGGAGCTTCGGCTCCCAAAGGCACGTGTCGTTGGCTAAGTCCGTTCGGCGGAAGCGCCGTTCGGACCGCCTTGAAATATAATTACCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCG

Boechera retrofracta (v1.0)

ID:

scaffold11351|size399_rRNA_51

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11351|size399_rRNA_51

CCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGGTGAATTACTATCGCGACGCGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGTATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTT

Boechera retrofracta (v1.0)

ID:

scaffold11363|size147900_rRNA_52

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

116

Start:

180  

End:

295

Strand:

-

>scaffold11363|size147900_rRNA_52

TTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCC

Boechera retrofracta (v1.0)

ID:

scaffold11366|size399_rRNA_53

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11366|size399_rRNA_53

CGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGGATCCCCTTTCGAAGTTCGCGCATAGGCGCTATCAGACGGGTTTCCCCCGACTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAGTATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAG

Boechera retrofracta (v1.0)

ID:

scaffold11368|size399_rRNA_54

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11368|size399_rRNA_54

ATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATAGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAACCTTGGGATGGGTCGCCCGGTCCGCCTTTCGGTGTGCACCGGTCGGCTCGTCCCTTCG

Boechera retrofracta (v1.0)

ID:

scaffold11372|size399_rRNA_55

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

114

Start:

250  

End:

363

Strand:

+

>scaffold11372|size399_rRNA_55

CGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTC

Boechera retrofracta (v1.0)

ID:

scaffold11378|size399_rRNA_56

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

98

Start:

7  

End:

104

Strand:

+

>scaffold11378|size399_rRNA_56

CAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGT

Boechera retrofracta (v1.0)

ID:

scaffold11378|size399_rRNA_57

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

154

Start:

246  

End:

399

Strand:

+

>scaffold11378|size399_rRNA_57

TGCTTATGGACCCGAACCTGGGTGATCTATCTATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTC

Boechera retrofracta (v1.0)

ID:

scaffold11383|size399_rRNA_58

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11383|size399_rRNA_58

CCCCAGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACGTCTTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGACCGGGCCCAAGTTCCCTGGAAAGGGGCGTCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTG

Boechera retrofracta (v1.0)

ID:

scaffold11391|size399_rRNA_59

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11391|size399_rRNA_59

GTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATCCCATGCCAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGACCAGGAGCGTATCGCCGACCGAAGGGACGAGCCGACCGGTGCACACCGAAAGGCGGACCGGGCGACCCATCCCAAGGTTCAACTACGAGCTTTTTAACTGCAACAACTTAAATAT

Boechera retrofracta (v1.0)

ID:

scaffold11392|size399_rRNA_60

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11392|size399_rRNA_60

CAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCCGTGAAGGGATGCCTCTACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGT