ID Class Order Superfamily Length Start End Strand View
scaffold11540|size399_rRNA_81 RetrotransposonsRet_otherrRNA3991399-
scaffold11546|size399_rRNA_82 RetrotransposonsRet_otherrRNA3951395-
scaffold11548|size399_rRNA_83 RetrotransposonsRet_otherrRNA1122113-
scaffold11550|size399_rRNA_84 RetrotransposonsRet_otherrRNA3991399+
scaffold11558|size399_rRNA_85 RetrotransposonsRet_otherrRNA3991399+
scaffold11559|size399_rRNA_86 RetrotransposonsRet_otherrRNA3982399-
scaffold11569|size399_rRNA_87 RetrotransposonsRet_otherrRNA3991399-
scaffold11572|size399_rRNA_88 RetrotransposonsRet_otherrRNA3961396-
scaffold11576|size399_rRNA_89 RetrotransposonsRet_otherrRNA3991399+
scaffold11582|size399_rRNA_90 RetrotransposonsRet_otherrRNA3961396+
scaffold11602|size399_rRNA_91 RetrotransposonsRet_otherrRNA3991399-
scaffold11612|size399_rRNA_92 RetrotransposonsRet_otherrRNA3991399+
scaffold11613|size399_rRNA_93 RetrotransposonsRet_otherrRNA1003102+
scaffold11613|size399_rRNA_94 RetrotransposonsRet_otherrRNA98269366+
scaffold11619|size399_rRNA_95 RetrotransposonsRet_otherrRNA3991399+
scaffold11624|size399_rRNA_96 RetrotransposonsRet_otherrRNA3991399+
scaffold11641|size399_rRNA_97 RetrotransposonsRet_otherrRNA3991399-
scaffold11655|size399_rRNA_98 RetrotransposonsRet_otherrRNA3041304+
scaffold11663|size399_rRNA_99 RetrotransposonsRet_otherrRNA3991399+
scaffold11664|size399_rRNA_100 RetrotransposonsRet_otherrRNA3955399+

< 5 6 7 8 9 > Total 165


Boechera retrofracta (v1.0)

ID:

scaffold11540|size399_rRNA_81

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11540|size399_rRNA_81

CCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCATAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCATGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGAC

Boechera retrofracta (v1.0)

ID:

scaffold11546|size399_rRNA_82

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

395

Start:

1  

End:

395

Strand:

-

>scaffold11546|size399_rRNA_82

AGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCTGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGCTGACTGTTCGACGCCCGGGGGGAAAGCTCCCGAGAGAACCGTTCCCAGTC

Boechera retrofracta (v1.0)

ID:

scaffold11548|size399_rRNA_83

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

112

Start:

2  

End:

113

Strand:

-

>scaffold11548|size399_rRNA_83

GACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCG

Boechera retrofracta (v1.0)

ID:

scaffold11550|size399_rRNA_84

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11550|size399_rRNA_84

CTGGGCGTCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGTAAGGCGCAAGGAAGCTGATTGGCGGGATCCCTCGCGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAGAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGGACGCGAGTTCTATCGGGTAAAGCCAAT

Boechera retrofracta (v1.0)

ID:

scaffold11558|size399_rRNA_85

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11558|size399_rRNA_85

CTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGGACGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGGGCGGCTGCTTTGTTGAGCCGTCCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGACGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTC

Boechera retrofracta (v1.0)

ID:

scaffold11559|size399_rRNA_86

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

398

Start:

2  

End:

399

Strand:

-

>scaffold11559|size399_rRNA_86

GCCAACACAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGACCAGGAGCGTATCGCCGACCGAAGGGACGAGCCGACCGGTGCACACCGAAAGGCGGACCGGGCGACCCATCTCAAGGTTCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGG

Boechera retrofracta (v1.0)

ID:

scaffold11569|size399_rRNA_87

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11569|size399_rRNA_87

GGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGCTGACTGTTCGACGCCCGGGGGGAAAGCTCCCGAGAGAACCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCGCAGACAGCCGACGGGTTCGGAACTTGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCA

Boechera retrofracta (v1.0)

ID:

scaffold11572|size399_rRNA_88

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

396

Start:

1  

End:

396

Strand:

-

>scaffold11572|size399_rRNA_88

GCCGAAGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGACTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGCTGACTGTTCGACGCCCGGGG

Boechera retrofracta (v1.0)

ID:

scaffold11576|size399_rRNA_89

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11576|size399_rRNA_89

AAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGCCCGCGTCCCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGATGCGACGCATGCGCCCGCCGCCCGATTGCCGACCCTCAGTAGGAGCTTCGGCTCCCAAAGG

Boechera retrofracta (v1.0)

ID:

scaffold11582|size399_rRNA_90

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

396

Start:

1  

End:

396

Strand:

+

>scaffold11582|size399_rRNA_90

GAAAGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAGAGTCAGAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGTCCCGGTCGGATGCGGAACGGAGCAATCCGGTCCGCCGATCGATTCGGGGCGTGGACCGACGCGGATTACGGCGGCGGCCTAAGCCCGGGCTTTTGATACGCCCGCGGAGACGTCGCTGCCGTGATCGTGGTCTGCAGCACGCGCCT

Boechera retrofracta (v1.0)

ID:

scaffold11602|size399_rRNA_91

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11602|size399_rRNA_91

TAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGGACGGCTCAACAAAGCAGCCGCCCCGTCCTGCCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCG

Boechera retrofracta (v1.0)

ID:

scaffold11612|size399_rRNA_92

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11612|size399_rRNA_92

AGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAATCGGAGGCGGGGTACAACCCCTGTTTTTGGACCCAAGGCTCGGTTCGGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTACCGATCCT

Boechera retrofracta (v1.0)

ID:

scaffold11613|size399_rRNA_93

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

100

Start:

3  

End:

102

Strand:

+

>scaffold11613|size399_rRNA_93

ACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAA

Boechera retrofracta (v1.0)

ID:

scaffold11613|size399_rRNA_94

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

98

Start:

269  

End:

366

Strand:

+

>scaffold11613|size399_rRNA_94

CAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGT

Boechera retrofracta (v1.0)

ID:

scaffold11619|size399_rRNA_95

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11619|size399_rRNA_95

GTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGGACGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGGGCGGCTGCTTTGTTGAGCCGTCCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTAGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGG

Boechera retrofracta (v1.0)

ID:

scaffold11624|size399_rRNA_96

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11624|size399_rRNA_96

CATTTATTAGATAAAAGGTCGACGCGGGCTTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCATGGCCTTTGTGCTGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTAAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGC

Boechera retrofracta (v1.0)

ID:

scaffold11641|size399_rRNA_97

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11641|size399_rRNA_97

TACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAGATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAAT

Boechera retrofracta (v1.0)

ID:

scaffold11655|size399_rRNA_98

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

304

Start:

1  

End:

304

Strand:

+

>scaffold11655|size399_rRNA_98

CCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGTGGTTCGCCGCCAGCGACGTCGCGAGAAGTCCACTAAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGT

Boechera retrofracta (v1.0)

ID:

scaffold11663|size399_rRNA_99

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11663|size399_rRNA_99

CCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGTCCCGGTCGGATGCGGAACGGAGCAATCCGGTCCGCCGATCGATTCTGGGCGTGGACCGACGCGGATTACGGCGGCGGCCTAAGCCCGGGCTTTTGATACGCCCGCGGAGACGTCGCTGCCGTGATCGTGGTCTGCAGCACGCGCCTTAACGGCGTGCCTCGGCATCTGCGTGCTCTGGGCGTCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGC

Boechera retrofracta (v1.0)

ID:

scaffold11664|size399_rRNA_100

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

395

Start:

5  

End:

399

Strand:

+

>scaffold11664|size399_rRNA_100

GCGAACTTCGAAAGGGGATCCGGTTAAAATTCCGGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTATCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCGCTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCAGTT