ID Class Order Superfamily Length Start End Strand View
scaffold11402|size399_rRNA_61 RetrotransposonsRet_otherrRNA3991399-
scaffold11406|size399_rRNA_62 RetrotransposonsRet_otherrRNA2531253-
scaffold11414|size399_rRNA_63 RetrotransposonsRet_otherrRNA3991399-
scaffold11419|size399_rRNA_64 RetrotransposonsRet_otherrRNA3991399+
scaffold11428|size399_rRNA_65 RetrotransposonsRet_otherrRNA3991399+
scaffold11434|size399_rRNA_66 RetrotransposonsRet_otherrRNA35615370+
scaffold11451|size399_rRNA_67 RetrotransposonsRet_otherrRNA3991399+
scaffold11468|size399_rRNA_68 RetrotransposonsRet_otherrRNA3991399+
scaffold11473|size399_rRNA_69 RetrotransposonsRet_otherrRNA3991399+
scaffold11483|size399_rRNA_70 RetrotransposonsRet_otherrRNA12576200-
scaffold11488|size399_rRNA_71 RetrotransposonsRet_otherrRNA3991399+
scaffold11493|size399_rRNA_72 RetrotransposonsRet_otherrRNA3991399-
scaffold11510|size399_rRNA_73 RetrotransposonsRet_otherrRNA3991399+
scaffold11518|size399_rRNA_74 RetrotransposonsRet_otherrRNA99209307-
scaffold11521|size399_rRNA_75 RetrotransposonsRet_otherrRNA35347399-
scaffold11523|size399_rRNA_76 RetrotransposonsRet_otherrRNA114212325-
scaffold11530|size399_rRNA_77 RetrotransposonsRet_otherrRNA3991399+
scaffold11533|size399_rRNA_78 RetrotransposonsRet_otherrRNA3981398-
scaffold11535|size399_rRNA_79 RetrotransposonsRet_otherrRNA3991399-
scaffold11537|size399_rRNA_80 RetrotransposonsRet_otherrRNA3991399-

< 4 5 6 7 8 > Total 165


Boechera retrofracta (v1.0)

ID:

scaffold11402|size399_rRNA_61

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11402|size399_rRNA_61

CTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATATTCCCTCTAAGAAGCCGGCCGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTG

Boechera retrofracta (v1.0)

ID:

scaffold11406|size399_rRNA_62

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

253

Start:

1  

End:

253

Strand:

-

>scaffold11406|size399_rRNA_62

CCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGAACTTGGGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAAGACGTCCGATTTTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTGCGCTTATTGATATGCTTAAACTCAGCGGGTGATCCCGCCTGACCTGGGGTCGC

Boechera retrofracta (v1.0)

ID:

scaffold11414|size399_rRNA_63

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11414|size399_rRNA_63

CGAACACTTCACCGGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGAACTCGTTGAGTACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCCGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGA

Boechera retrofracta (v1.0)

ID:

scaffold11419|size399_rRNA_64

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11419|size399_rRNA_64

CGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAGGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAATCGGAGGCGGGGTACAACCCCTGTTTTTGGACCCAAGGCTCGC

Boechera retrofracta (v1.0)

ID:

scaffold11428|size399_rRNA_65

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11428|size399_rRNA_65

TCCGTGAATCGGAGGCGGGGTACAACCCCTGTTTTTGGACCCAAGGCTCGCTTCGGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGACTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGT

Boechera retrofracta (v1.0)

ID:

scaffold11434|size399_rRNA_66

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

356

Start:

15  

End:

370

Strand:

+

>scaffold11434|size399_rRNA_66

GGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCCCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATG

Boechera retrofracta (v1.0)

ID:

scaffold11451|size399_rRNA_67

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11451|size399_rRNA_67

GGCCGGCGATGCGTCCCGGTCGGATGCGGAACGGAGCAATCCGGTCCGCCGATCGATTCGGGGCGTGGACCGACGCGGATTACGGCGGCGGCCTAAGCCCGGGCTTTTGATACGCCCGCGGAGACGTCGCTGCCGTGATCGTGGTCTGCAGCACGCGCCTTAACGGCGTGCCTCGGCATCTGCGTGCTCTGGGCGTCGGACTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGTAAGGCGCAAGGAAGCTGATTGGCGGGATCCCTCGCGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAAC

Boechera retrofracta (v1.0)

ID:

scaffold11468|size399_rRNA_68

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11468|size399_rRNA_68

ATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCAGTTCCGAACCCGTCGGCTGTCTGCGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGCACGGACTGGGAACGGTTCTCTCGGGAGCTTTCCCCCCGGGCGTCGAACAGTCAGCTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACG

Boechera retrofracta (v1.0)

ID:

scaffold11473|size399_rRNA_69

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11473|size399_rRNA_69

AGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGTCGGGGGAAACCCGTCTGATAGCGCCTATGCGCGAACTTCGAAAGGGGATCCGGTTAAAATTCCGGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCAGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCGCTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAAT

Boechera retrofracta (v1.0)

ID:

scaffold11483|size399_rRNA_70

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

125

Start:

76  

End:

200

Strand:

-

>scaffold11483|size399_rRNA_70

TTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCG

Boechera retrofracta (v1.0)

ID:

scaffold11488|size399_rRNA_71

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11488|size399_rRNA_71

GGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCAGCGGATGTTGCTTTTAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAGTTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGGCCGGCTTCTT

Boechera retrofracta (v1.0)

ID:

scaffold11493|size399_rRNA_72

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11493|size399_rRNA_72

CGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCGCAGACAGCCGACGGGTTCGGAACTGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACAACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGC

Boechera retrofracta (v1.0)

ID:

scaffold11510|size399_rRNA_73

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11510|size399_rRNA_73

AAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCAGTTCCGAACCCGTCGGCTGTCTGCGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGGACGGTTCTCTCGGGAGCTTTCCCCCCGGGCGTCGAACAGTCAGCTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAAC

Boechera retrofracta (v1.0)

ID:

scaffold11518|size399_rRNA_74

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

99

Start:

209  

End:

307

Strand:

-

>scaffold11518|size399_rRNA_74

TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCG

Boechera retrofracta (v1.0)

ID:

scaffold11521|size399_rRNA_75

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

353

Start:

47  

End:

399

Strand:

-

>scaffold11521|size399_rRNA_75

ACAGGTTTCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTTCTCGCGACGTCGCGGGCGGCGAACCACCCACGTCGCCGCGATCCGAACACTTCACCGGATCAATCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGAACTCGTTGAATACATCAGTGTAGCGCGCG

Boechera retrofracta (v1.0)

ID:

scaffold11523|size399_rRNA_76

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

114

Start:

212  

End:

325

Strand:

-

>scaffold11523|size399_rRNA_76

GAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCG

Boechera retrofracta (v1.0)

ID:

scaffold11530|size399_rRNA_77

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11530|size399_rRNA_77

GGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGCCCGCGTCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGTTAGATGCGACGCATGCGCCCGCCGCCCGATTGCCGACCCTCAGTAGGAGCTTCGGCTCCCAAAGGCACGTGTCGTTGGCTAAGTCCGTTCGGCGGAAGCGCCGTTCGGACCGCCTTGAAATATAATTACCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTG

Boechera retrofracta (v1.0)

ID:

scaffold11533|size399_rRNA_78

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

398

Start:

1  

End:

398

Strand:

-

>scaffold11533|size399_rRNA_78

ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGTCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATCGGCCCGCCGAAGCGAGCCTTGGG

Boechera retrofracta (v1.0)

ID:

scaffold11535|size399_rRNA_79

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11535|size399_rRNA_79

AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTCCTCATAAGGTGCCAGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAAT

Boechera retrofracta (v1.0)

ID:

scaffold11537|size399_rRNA_80

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11537|size399_rRNA_80

CACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG