ID Class Order Superfamily Length Start End Strand View
scaffold10850|size403_rRNA_21 RetrotransposonsRet_otherrRNA116259374+
scaffold10853|size147810_rRNA_22 RetrotransposonsRet_otherrRNA116161276-
scaffold10934|size402_rRNA_23 RetrotransposonsRet_otherrRNA162203364-
scaffold11020|size401_rRNA_24 RetrotransposonsRet_otherrRNA243159401+
scaffold11070|size400_rRNA_25 RetrotransposonsRet_otherrRNA4001400+
scaffold11092|size147951_rRNA_26 RetrotransposonsRet_otherrRNA16271232+
scaffold110|size209998_rRNA_27 RetrotransposonsRet_otherrRNA994526145359-
scaffold110|size209998_rRNA_28 RetrotransposonsRet_otherrRNA1136724467356+
scaffold110|size209998_rRNA_29 RetrotransposonsRet_otherrRNA139168211168349+
scaffold11108|size400_rRNA_30 RetrotransposonsRet_otherrRNA116101216-
scaffold11110|size400_rRNA_31 RetrotransposonsRet_otherrRNA116182297+
scaffold11126|size400_rRNA_32 RetrotransposonsRet_otherrRNA1056110-
scaffold11168|size400_rRNA_33 RetrotransposonsRet_otherrRNA3981398-
scaffold11222|size399_rRNA_34 RetrotransposonsRet_otherrRNA290110399-
scaffold11232|size399_rRNA_35 RetrotransposonsRet_otherrRNA3991399+
scaffold11238|size399_rRNA_36 RetrotransposonsRet_otherrRNA3991399+
scaffold11239|size399_rRNA_37 RetrotransposonsRet_otherrRNA3991399-
scaffold11241|size399_rRNA_38 RetrotransposonsRet_otherrRNA3991399-
scaffold11245|size399_rRNA_39 RetrotransposonsRet_otherrRNA3973399+
scaffold11268|size399_rRNA_40 RetrotransposonsRet_otherrRNA3991399+

< 2 3 4 5 6 > Total 165


Boechera retrofracta (v1.0)

ID:

scaffold10850|size403_rRNA_21

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

116

Start:

259  

End:

374

Strand:

+

>scaffold10850|size403_rRNA_21

GGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAA

Boechera retrofracta (v1.0)

ID:

scaffold10853|size147810_rRNA_22

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

116

Start:

161  

End:

276

Strand:

-

>scaffold10853|size147810_rRNA_22

TTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCC

Boechera retrofracta (v1.0)

ID:

scaffold10934|size402_rRNA_23

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

162

Start:

203  

End:

364

Strand:

-

>scaffold10934|size402_rRNA_23

ATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATAGATAGATCACCCAGGTTCGGGTCCATAAGCA

Boechera retrofracta (v1.0)

ID:

scaffold11020|size401_rRNA_24

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

243

Start:

159  

End:

401

Strand:

+

>scaffold11020|size401_rRNA_24

GCGACCCCAGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATAGCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACGTCTTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGACCGGGCCCAAGTTCCCTGGAAAGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCG

Boechera retrofracta (v1.0)

ID:

scaffold11070|size400_rRNA_25

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

400

Start:

1  

End:

400

Strand:

+

>scaffold11070|size400_rRNA_25

ACTCGACGGATCGCATGGCCTTTGTGCTGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACAGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAACCTTGGGATGGGTCGCCCGG

Boechera retrofracta (v1.0)

ID:

scaffold11092|size147951_rRNA_26

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

162

Start:

71  

End:

232

Strand:

+

>scaffold11092|size147951_rRNA_26

TGCTTATGGACCCGAACCTGGGTGATCTATCTATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACCCGAACCCAGAGCTAGCTGGTTCTCCCCGAAAT

Boechera retrofracta (v1.0)

ID:

scaffold110|size209998_rRNA_27

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

99

Start:

45261  

End:

45359

Strand:

-

>scaffold110|size209998_rRNA_27

TCGTTACGCCTTTTGTGCGGGTCAGAACTTACACGACAAGGAATTTTGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACTGGGACTTCGGTCG

Boechera retrofracta (v1.0)

ID:

scaffold110|size209998_rRNA_28

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

113

Start:

67244  

End:

67356

Strand:

+

>scaffold110|size209998_rRNA_28

GGGGAGTATGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCACACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAAGCAAAGAACCTTACCAGGGCTTGACAT

Boechera retrofracta (v1.0)

ID:

scaffold110|size209998_rRNA_29

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

139

Start:

168211  

End:

168349

Strand:

+

>scaffold110|size209998_rRNA_29

AACCCCGACTTTTGGAAAAGATGCATTTATTAGATAAAAGGTCAACGCGGACTTCTGTCTGTTGCTCTGATGATTCATGATAACTCGACGGATCGCATGGCCTTTGTGCTGGCGACGCATCATTCAAATTTCTGCCCTA

Boechera retrofracta (v1.0)

ID:

scaffold11108|size400_rRNA_30

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

116

Start:

101  

End:

216

Strand:

-

>scaffold11108|size400_rRNA_30

TTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGCTGTCTCTTGCCTGCCC

Boechera retrofracta (v1.0)

ID:

scaffold11110|size400_rRNA_31

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

116

Start:

182  

End:

297

Strand:

+

>scaffold11110|size400_rRNA_31

GGGCAGGCAAGAGACAACCAGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAA

Boechera retrofracta (v1.0)

ID:

scaffold11126|size400_rRNA_32

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

105

Start:

6  

End:

110

Strand:

-

>scaffold11126|size400_rRNA_32

TAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCC

Boechera retrofracta (v1.0)

ID:

scaffold11168|size400_rRNA_33

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

398

Start:

1  

End:

398

Strand:

-

>scaffold11168|size400_rRNA_33

CCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCCGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGGACGGCTCAACAAAGCAGCCGCCCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGG

Boechera retrofracta (v1.0)

ID:

scaffold11222|size399_rRNA_34

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

290

Start:

110  

End:

399

Strand:

-

>scaffold11222|size399_rRNA_34

ACAGGTTTCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTCCTCGCGACGTCGCGGGCGGCGAACCACCCACGTCGCCGCGATCCGAACACTTCACCGGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT

Boechera retrofracta (v1.0)

ID:

scaffold11232|size399_rRNA_35

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11232|size399_rRNA_35

GGAACGGAGCAATCCGGTCCGCCGATCGATTCGGGGCGTGGACCGACGCGGATTACGGCGGCGGCCTAAGCCCGGGCTTTTGATACGCCCGCGGAGACGTCGCTGCCGTGATCGTGGTCTGCAGCACGCGCCTTAACGGCGTGCCTCGGCATCTGCGTGCTCTGGGCGTCGGCCTGTGGGCTCCCCATTCGACCCGTCTAGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGTAAGGCGCAAGGAAGCTGATTGGCGGGATCCCTCGCGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGG

Boechera retrofracta (v1.0)

ID:

scaffold11238|size399_rRNA_36

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11238|size399_rRNA_36

GTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTCAACGTTATTTTACTTACTCCGTGAATCGGAGGCGGGGTACAACCCCTGTTTTTGGACCCAAGGCTCGCTTCGGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAG

Boechera retrofracta (v1.0)

ID:

scaffold11239|size399_rRNA_37

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11239|size399_rRNA_37

GACCACGATCACGGCAGCGACGTCTCCGCGGGCGTATCAAAAGCCCGGGCTTAGGCCGCCGCCGTAATCCGCGTCGGTCCACGCCCCGAATCGATCGGCGGACCGGATTGCTCCGTTCCGCATCCGACCGGGACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAATCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGAACTTGGGCCCG

Boechera retrofracta (v1.0)

ID:

scaffold11241|size399_rRNA_38

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

-

>scaffold11241|size399_rRNA_38

TGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGGATCCCCTTTCGAAGTTCGCGCATAGGCGCTATCAGACGGGTTTCCCCCGACTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCGCCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTC

Boechera retrofracta (v1.0)

ID:

scaffold11245|size399_rRNA_39

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

397

Start:

3  

End:

399

Strand:

+

>scaffold11245|size399_rRNA_39

TTCTTTCTTTCCTTAGCGTTAGCGAGAATGTGGCGGGGAATTGCTGTGATCGATGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACGAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTAACTACTATTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCATGGCCTTTGTGCTGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGAT

Boechera retrofracta (v1.0)

ID:

scaffold11268|size399_rRNA_40

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

1  

End:

399

Strand:

+

>scaffold11268|size399_rRNA_40

AGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGCCCGCGTCGCGATAGTAAATCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGATGCGACGCATGCGCCCGCCGCCCGATTGCCGACCCTCAGTAGGAGCTTCGGCTCCCAAAGGCACGTGTCGT