Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_61Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
149Start:
4774399End:
4774547Strand:
+>A01_LTR-Copia_61
TGGGATTAGGATAAATATAAAGTTTCCTATATTGTTGGGATTTAGACGATCTATGTATTTCCTTTTCCTAGCTAGGTTATGCTAAAGATGTTGTATATAAACACCTCTTGGTGAATGAATAAAGGACACACAATTCTACATTATATTCA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_62Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1620Start:
4978498End:
4980117Strand:
->A01_LTR-Copia_62
GAAGGAAGAAAGAGACTTGAGAGAGACATGCGATCAAGTAAAGAGCGGAAAGGTCCAGTATGCAGCGGCTTCGTGAAGATGTCAGCATGCTGATTAGCACTCGAAACGTGCATCAATGTGATGAACCCTCTCTTGACTTGATCACGGACGGTATGGCAGTCTATCTCCACGTGTTTAGTCCGTTCATGAAAGACCGGGTTTGTAGCAATGTACATCGCCGACTTGTTGTCACAGAAAAGCTTGGCTTTGGTGGTTACCTGAATCTTCAGGCTGGTGAGTAGTTGTTGAAGCCATAGAAGTTCACAAGTCGTGTATGCCATGCTACGATACTCAGCTTCAGTGCTACTTCTACTAATCACATCTTGTTTCTTTGATTTCCATGTAATCAATGACGTTCCAAGGTAGACACAATACCCCGTAACAGACCGTCGCGAATCTGGACATGTTGCCCAGTTTGCATCCGAGAACGCATTGAGACAGAGAGGTGAAGCAGCAGAGTAGAACAATCCCTGGCCTGGATTGTTCTTGATATAACGCAGTATGCGATGAGCTGCAGTGAGGTGAACGTCAGTAGGAGAAGACATAAACTGACTCAAGCAGTGCACAGCAAACGTTATATCAGGGCGAGTTATCGTCAAGTAGAGGAGACGACCTATTAGAGCCCGAAAAGAAGTAGGATCAGCAAGAGGTATACCAGATTCACTACTTAATTTCACCAATGGATCCATCGGAACTGGACTTGGCTTGCAAGCCAGAAGTCCTGCATCAGAAAGTAAACTCAACGCATACTTCCTCTGACAATGGACGTATGTCTAGCAATCTCCAAACCAAGAAAGAAGCGAAGAGGACCAAAATCTTTAATCTTGAAATGTTGGTGAAGTGTGTCTTTCAGAAGTTGGATCACAGCATCATCATTACCAACGATCATGATGTCGTCCACATAAACAAGCGCAGCAACAAAGGAAGATCCCATTTGTTTCACAAACAATGTGTTATCAGCTGGTGATTGAACGTAACCAGCAGAGAGAAAGACTGCAGAGAGGCAGTTATACCATTGTCTGGACGCTTGTTTCAAACCATACAGTGACTTGTGGAGTCGACATACCGGATTTGGTGGAAGAGAACCAGAGGCTGAAACATAACCCTGAGGAAGACTCATGAAGATTTCCTCATCCAAATCACTATGCAGAAACGCATTAGAGACGTCCATTTGAGACATACTCTATCCTTGTATCGCAGCAAGAGCCAGAAGGAGCTTGACACTCGCAAGCTTAGCAACAGGAGAAAACGTGTCAGTGAAGTCAACACCTTCTTTCTGTGTGTAACCTTTGGCAACCAGGCGAGCTTTATACCGCTCAATCGTACCATCAGCTTTGTATTTGATAGTATATACCCATTTGCATCCAACTACATTCTTCCCCGGAGGCAATGATTCAACAGTCCAGGTATGATTCGCTTCCATGGCCTGCAGTTCCTCGTTTGTAGCCTTCTTAAAATTGGGGGATAACATGGCTTGTTTAAAAGAGGTGGGTTCTGTTTCAAGGGAGTATGAAAGGATATAGGACTGATAAAGGGGTGTGAAATTGGAATAGGTAATAACAGAGGAAAGAGGATAAGGCG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_63Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1495Start:
4980320End:
4981814Strand:
->A01_LTR-Copia_63
ATGCACAGGAGGAGCACTATCAACAAACATAGGAACAGGCAATGGCAAGATAGTATTGTCAAAGATATTAGGAATGTGAGAGCAATCATGAAGTTTATCATCTGTAAAAGGAAAAATATTTTCATGAAAAATAACATTCCTAGTAATCGAGATCTTATTTGAACCAATATGCAAGACTTTATATCCTTTATATCCCGAAGGATAACCCATGAACACACAAGCATCAGCACGAGCAGTGAATTTGTTTCTATCCTTAGGTAAAGTAGAGACATAACAAAGACAGCCAAAGGATTTTAAGTGAGAGTAATCAGGAACCTTCTTCATCAATAGCTCATAAGGAGACTTGTTAGCTAGTAACACAGAAGGTATCCTATTGATGAGATACACAGCAGTACACACACAATCACTCCAGTAAGCTAAAGGTATTTTAGATTGAAACAACAAGGCGCGAGCAACATTCAATATATGTTGATGTTTACGTTCGACAATGGAGTTTTGTTGAGGTGTATATGCACAAGAGAAGTGATGAATCATACCATGTTGTTTAACAAGTTGAGTGAATGCTAGTTCAGGAGCATTGTCACTGCGGATGACTTTAATAGCAGAATGATATTGAGTAGAAACATGATTAACAAACTCTGGAAAGACAGTTAAAACATCATTTTTATTACGCATCATGTATACCCAAGTCACCCTTGTACAATCATCAACTATCGTAAGAAAATATCGATAACCTTCAACAGACTCGATAGAGAAAAGACCCCAAACATCGAAATGGATCAAGTCAAAAGGTGAAACAGACACTGTACTACTTGACTCAAATGACAATCTCTTTTGTTTTGCTAAAGGACAGACAGAACAATGTTCAGACTTATGAGAACTAGACTCAGTAATACGTAAAGTACCCAGACAGTTGCTTTAACTTGGAAGCTGATGGATGTCCAAGGCGTTGATGCCATAGATTTCCATCGACTTGCAAGGATCCACAGAACGACAAAGGTGCAATGCTATCAGTCTCAAGAACGTATAGATTTTGAAGAAGTTTTCCTCTACCAATCATCAAGCCCTGAATAGACTCCTGTAATAAGCAAAAATCAGGGTAGAAGTGAGCAGAAAATTGACTATCACGAAGAAGACTACATACACTGATCAAATTAAATCTAAAAGATGGAACGTAAAGCACATTTTGTAGTATAATCGAGGAAGAGATATGCACAGTTCCTATATGAGTAATAGGCTCATGGACCCCATTAGGAAGAGAGACTGTAACGCCAAGTACAGATGAAGTATTGGTAAAAAGGTTGAGATCCGAGCACACATGTGTCGTGGCGCCACTGTCAATAATCCAAGCATCACTAGCTAGTGTATTCGAGAGGGTAGAAAGACACTGATTTTGAAAAGTAAGGATATGGTTTTGAAATTTAAGGCTAGTAGATGGAAAAGGAATAATACCAGAGGTAGATTGAGGTGCCATGTATCCATTCTCATTGATAGA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_64Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
904Start:
4982062End:
4982965Strand:
->A01_LTR-Copia_64
TTGTTATACTTGTGACCAGGAGGATATCCATGGACACGAAAGCATTTATCAACGACATGTCCAAGTTGATTACAGTAAGTACATAAAAGCCGTTGTTTGGGACGATAGCCTGAGTTATTGTGAGTAGCAGCAAAGGCAGAGTGATCAGGAGCAACAACAGCAATAGTAGGAAGACTCTCTGCTGGTCCTGAAGCTTGGAGGGCAACAGGTACTGAAGTAGTACTTGGTTTGATCCCTCGTTGACGCTCATCTTGAGTCACCATATTGAACACATCTTCAATGGTCGGTATTGGTTTCAGCATCAAGATGTGACGACGAGTAGACTCATAAGACTCATTAAGCCCCATCAAGAACTTCGTGACTCTGCTTCGCTGTTGAAGACGTTCCCATAGCTCAGCCGCATTACACTCACACTTGCCACAGGAACACACAGGCAATTCAACATAGTTCTTATGCTCTTCCCATAGAGTAACCAAAGCTGTGTAATAGGCACTAACGTCCATTGAACCCTGCTGAATCGAGCTTAGCTGTTGTTCAATCTCATAAACCCGTGGAGCATCATCCTGTTTGAAACGAGAAAGGATGTTCTTCCAAATAGCCTCAGCAGTAGACATGAACAATAGACTCTGACCTATCTTCTTGGAAACAGAATTTAATAGCCAAGTAGCAACCATATCATTGCATCTAGACCAAGATCCCGAATCGCGATGGTTATCAGGGGGTTTAGGAATGCTACCGTCAATGAATCCCAGTTTGTTGCGGACGTTGAGCGCCATTCGAACTGAGCGACGCCATGAATGGAACTCAGCTCCAGATGTAAGACGATCGGAGACAAGCACAAGGCCCGCGTGATCCGAGCTATGAAGATAGTATGGATTTTCGTAATGATCTCTGTTTGCGCGAG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_65Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
231Start:
5082804End:
5083034Strand:
+>A01_LTR-Copia_65
TGGATAAGCTTGAGTTGCAAGTTTCCTTTTCTTTAAAGTTATGATTATCTATAAGGATTAGGATATTATGTTTGTGATAATACTATGAGGATTAGGAGATGTCTAAGTCCTTTATATAGTGTTGCATATTGAGATGCATAAGTGTGTGAGTTTGTGATTGTGATTGCTTGATTGAGCTTTTGATATTGAATAATAAGAGAAGGACTTCTTATTGATATTGTGATTCTAGAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_66Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4060Start:
5083124End:
5087183Strand:
+>A01_LTR-Copia_66
ACAAAGATGTTGGAGCAGCTTCTGTTAAACTTCCGATGCTCACCTCCTCTAACTATACAGTTTGGGCTATGAGGATGAAAATAGCATTAAAAGTAAGCAAAGTCTGGGAAACAATCGACCCTGGGAGCAAAGCAGAAGATAAAAACAACATGGCCATCGCCTTGTTATTCCAATCAATACCTGAAGCTTTGGTCCTTCAAATTGGGGAGTTAGACGACGCAAAATCTGTTTGGGATGCTGTAAAAGCACGACACATTGGAGCAGAACGAGTACGTGAAGCGAGACTACAAACTTTGATGGCAGAGTTTGATAGACTCAAGATGAAAGAAACGGAGACAATTGATGCATTCGTGGGAAAACTTTCGGAGATATCCTCAAAATCAGCTTCCTTAGGGGAAACAATCGAGGAACCTAAAATTGTTAAGAAGTTTTTATCAAGCTTGCCAAGAAAGAAATATATTCACATTGTCGCTTCACTTGAGCAAGTATTAGATCTAAACTCAACAAGTTTCGAGGATATCATTGGGAGATTGAAAGCTTACGAAGAGAGAGTCACCGAAGAAGAAGAAGAAACACCTGAAGACTCTAGCAAACTAATGTACGTAGACTCAAGACAAGAGAGCTATGGCAACAACTACAATAACCGAGGACGTGGTCGTGGTGGTAGATCAAACTTGCGAGGAAGAGGTCGTGCGCGAGGATCGTTTCAACAGCAAAGAGACGCATATCGCCAAGGACGAGGTGGTGGTGGAGATGCGTCTCACATTACCTGTTTCAATTGTGATAAACTAGGACACTACGCCACAGATTGTCCCGATAAACTTTTGAACCTTCAAGAAGCTGTTGAAAAGAAGGATGAAGACACTGAAGAAGCTGATGCTCTCATGATGAATGAGGTTGTTTACCTAAACGAGAACAAGGTAAATCCTAAAAGCTTTGAGGCCGAATCTGACTCAATAGACGTGTGGTATCTTGACAATGGCGCTAGCAACCACATGAGTGGTAATCGATCGTTTTTCTTCGAGTTAGACGACTCAATCACTGGAAAAGTACGGTTCGGAGATAACTCAAGGATTGACATAATGGGAAAGGGTTCAATACGGTTCCTAGTCAAAGGAGGAGAGAAGAAAATCCTAAGAAACGTATACTATATTCCAGCACTACGTAGTAACATTGTAAGCTTAGGACAAGCTACGGAAGTTGGGTGCGAGGTTCGCATGAAAGATAATCAACTAAGCTTACTGGATAGAAACGGACAACTGATGGTCAAAAGCATTAGAGCAAAGAACCGTCTTTATAAGGTAACCCTCCAGGTCGATCTTATACAATGCTTGCAAGTGAGAGGACTTGGAGACAGTACATTGTGGCACGCACGGCTGGGGCATATTAGCAAGGATACAATGCGACTTATGGTCAGTAAAGAGATTGTCAAAGGCGTACCTGACACTGATCGTAGCTCCGAAACTTGTGTGTCGTGTCTGAAGGCGAAGCAAACTCGGAAACCTTTCCCACAAGCAACATCATATCGCGCTAAAGAACTTCTTGAGCTCATACATGCTGACTTATGTGGACCTATCACACCATCAACTCCAGCCAAGAACCGGTATATCTTTGTCCTTATTGACGATTGCTCTCGCTACATGTGGACGGCTTTACTAAAGGAAAAGAGTGAAGCCTTTGAGAAGTTTAAAAACTTTAAAATACTTGCTGAACAAGAAACACAGATGGAGCTAAAGAAACTACGGACAGATAGAGGAGGAGAATTTGTATCACGAGAGTTTCAGGTTTACTGTGAGAAACATAGCATCAAGCGAGACTTAACTGCGCCCTACTCTCCACAGCAAAACGGTGTAGTGGAACGACGAAACAGAACGCTCATGGAGATGACTAGAAGTATCCTAAAGCACATGAACTTACCAAACTACCTCTGGGGCGAAGCAATAAGACACTGCACCTATCTAATCAACCGGGTCGCAACTAGGTCGTTAGACGGAACCACACCATATGAAGCTTTAAGGTCACGCAAACCGAATCTATCGCACGTTAAAGTATTTGGATGTGTTTGTCACGCAAGAACAGAAAAGGCAGGAAGAAAGAAGCTCGATGACAGATCCAGAACTCTTGTGCACCTTGGAACAGAACCAGGATCAAAAGCTTACCGACTACTTGATCCATTGAGTAAGCGCATTGTTGTCAGCAGAGATGTTGTGTTCGAAGAAAATAAATGTTGGAACTGGACAGAACTCGACAACAATGATCCGGGAGAACTTGAAATTGACCTATCACGAATGATCGACATCTATACTGAATCTGTGAATCAAGATACGCCTACAGCGATAGAAGATGAAGAAGAGCTCGACAATAATGGCGATGACAGTGGTGAAGATGAAGATGAACCTCTACCTAGACGATCAACAAGGGCCACAACTAGACCTACATACCTCGACGATTACATTCTTCTTGCAGAAATAGAAGGAGAGCGACTATTGTTGATTATTAATGATGAGCCGTGGGATTACAATGAAGCTAAGAAGATGAAAGTTTGGGTTGATGCCTGCAAAGATGAGATTTCTTCAATAGAGAAAAACAATACTTGGGATCTTGTTGAGCTACCGGATGGCATAAAACCAATAGGCTTAAAATGGGTCTTCAAGATCAAACGCAACGCTGACGGTACTATCAGCAAATACAAGGCACGGTTGGTAGCAAAAGGATATGTTCAACGACATGGAGTGGACTACGATGAAGTATTTGCTCCGGTGGCTCGAATTGAAACTATACGACTGATTATTGCGCTCGCTGCCTCACATGGATGGGAGATACATCATCTCGACGTCAAGACCGCGTTTCTCCACGGAGAGCTAAAGGAGGAAGTCTTTGTGAACCAACCCGAGGGCTTCACGGTCGCAGGAGAAGAACACAAAGTCTACAGACTTAAGAAAGCTCTCTACGGTCTACGACAAGCACCGAGAGCTTGGAATATAAAACTCAACCACATTCTGCGAGGTTTAAAGTTCCAGAGATGCCACAAGGAACCTTCTCTCTATCGTAGAGAGGAAAACAATGTGCTTCTCATTGTGGTAGTCTATGTTGATGACCTACTAGTCACCGGCTCATCCTTACAAGCCATACTTGAGTTTAAAATGGAGATGGGAACTAAATTTGAGATGAGCGATCTTGGAAAACTAACGTACTATCTGGGTATAGAAGTCTTGCAATATGACGGAGGCATTATACTCAAACAAGATAGATATGCTAGGCGTATACTTGAGGAGTGTGGCATGAGCACGTGCAACCTAACACACGTCCGTTTGGATCAGAACGCACAGTTCTGTAAAGCTCAAGACGAAGAGAAAGTAGACGAGAAGGAGTTTCGCAGAAACATCGGCTGTTTACGTTACCTATTGCATACTCGACCAGACCTAGCATTTAGTGTTGGAGTCTTGAGTAGATATATGCAAGATCCTAAGACATCACACGGAGCTGCAATGAAACAAATCCTTAGGTATCTTCGTGGGACTGTCTCTCTTGGGTTGCACTATGAACGAAGAAAAGGGACAGAACTGATAGGCTACTGCGACAGCTCGTGCAATATAGATGTTGATGATGGCAAAGGCACAGCAGGACATATATTCTATTTCGGTGAAAGTCCAGTAACCTGGAGTTCGAGAAAGCAAGAGCTGGTAGCACTCTCGTCATGTGAATCTGAATTCATGGCTGCAACAGAAGCAGCCAAACAAGCTATTTGGTTGCAGGAGTTACTAAGTGAAGCTATTGGAGAAGCTAGTAAACGTGTAGTCATAAAAGTAGATAACAAGTCCGCCATTGCATTGTCAAAGAACCCGGTGTTTCATGGTCGAAGCAAGCACATTCATAGGAGGTTTCACTTCATAAGAGAGTGCGTTGAGAATGAGTTGGTTGAAGTTGAACACATACCAGGAAGTGAGCAAAAGGCGGACATCCTCACCAAGTCACTTGGTCGAAACAAGTTTAAAGAGATGCGTGAACTCATTGGAGTTCAAAATGTGTGTGAAGACAAGTTCAAGCTTAAAGGGGAGAA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_67Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
228Start:
5087187End:
5087414Strand:
+>A01_LTR-Copia_67
TGGATAAGCTTGAGTTGCAAGTTTTCTTTTCTTTAAAGTTATGATTATCTATAAGGATTAGGATATTATGTTTGTGATAATACTATGAGGATTAGGAGATGTCTAAGTCCTTTATATAGTGTTGCATATTGAGATGCATAAGTGTGTGAGTTTGTGATTGTGATTGCTTGATTGAGCTTTTGATATTGAATAATAAGAGAAGGACTTCTTATTGATATTGTGATTCTA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_68Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
143Start:
5662146End:
5662288Strand:
+>A01_LTR-Copia_68
TGAGATTAGGATAACTTCCATTATATTGAGATAATTCCAATTCCGTTAAGGAATATCTTGTCTTTGGAGTTGTATATATACGATGTATTGTCAAACTTGTTCAATAAGAAAGTCTATTCAGAATATCGTTTCCTATCTTTACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_69Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4567Start:
5662289End:
5666855Strand:
+>A01_LTR-Copia_69
TGGTATCAGAGCAGAAATTTTCTGTGACCTAGAATTTTTTTTTTTTTTTTTCTGTTTAAAGTTCTTCGAAGTTCGGAGGCTTGTGTTGTTGTTACTGGTTCTCTGTGAGATTCAGCAAAGATGGTTGAAGGTGATGAATCATCGGCTATCAAGAGTGGAACATCGGATAACGTCAGTGACGTTGGCAACAAGATTGCGACACCTTACTCTCTCCATGCGTCCGATAATCCGGGTGCTATGATCACGTCTGTGACGTTGACAGGAGAGAATTATAATGAGTGGTCTAGTGAAATGACCAATGCTCTTCGTGCCAAACGGAAGCTTGGGTTCATCGATGGATCAATTACGAAACCATCCGCAACCGATTCTAACTTGGAGCTTTGGCTTTCGGTTAACTCGATGATTGTGGGTTGGATTCGAACGTCTATAGAACCGCGTGTGCGGTCTACGGTTACGTTTGTTCAAGATTCTCATAAACTGTGGGAAAATTTGCGCAAACGATTCTCTGTGGGAAATAAGGTGCGAGTGCATCATCTGAAGGAGCAGCTGGCTTCGTGTCGACAAGACGGTCAGCCTGTGATTGAGTTCTTTGGGCGTTTGTCCAAGCTATGGGAGGAGTTGGACATGTATTCACCGCTTCCAAGTTGTACTTGTGCAGCAGCTTCGGAGATTGAGAAAGCTAGAGAAGCTGAGAAGATGCATCAGTTCGTAATGGGCTTAGATGAGGCTCGTTTTGGAGGAATTTGTCAGTCGATCATCTCGTCAGATTCAGATTTGGATATTGGAGAGATATATGCTAAAGTTGTCTGAGAAGAACAACGTCTTAATTCAGCTAAAGAACGGGAGTCTCAGCAGAATGCTATTGGGTTCTTGGCTAAAACCGAAGCAGAGCAAACTACCCCTAGTGCTAACTCCACCGGTTCAGGAAAACGATCACAGTGTGCTCACTGCGGGAGAACTGGTCACGATAAAACAAACTGTTGGCAATTGGTCGGCTTTCCTGACTGGTGGGAAGAACGTTCGTCGGCCAACAGAGGTGGTAATGGAGGAAATAGAGGTGGTTCTCGCGGTGGTCGTGGGCGTGGCTCATCAAATTCTTCGCGTAACACAGGAGCTCGTGTCAACAATGCTCATGCCACTACCTCCAATTCCTCATCCTTCCCAGGTTTCACAGAAGAACAATGGACAGCTCTTACCCAGATGATCCACGAACGAACACGTCCATCTTCTTCTGATAAGCTTTCTGGTAAGAAGAGACATGGTGACCTTATATTGGACACGGGTGCGTCCCATCATATGACGGGCGATTTCTCTCTACTGATTAATGTGTCTGTCATACCACCGTGTCCTGTTGGGTTTGCGGACGGGAACAGAACGTTTGCAACTCACGTTGGCAGTTTGCCATTAACAGATCAAGTCACATTGGAGAAAGCACTATTTGTGCCGAACCTAAATTGTTCTTTGATTTCTGTTTCGAAATTTTTGAGACAGACAAATTGCTTTGCTCTTCTTACTGATACAGTGTGTGTCTTGCAGGACCGTTTTACGAGGACGCTGATTGGAGCCGGTAAAGAGCGAGATGGGGTATACTACTTTCAGGATGTCATGGCTGCAAGGGTTCATCGTGTGACTAGTCCAGTGGTTAGTTCTGCTGATCAGTTCATGTGGCACCAACGGCTAGGGCATCCGTCGTTTTCAGTGTTATCGTCTTTACCTATGTTTTCTACCAATAAAACAGCTTCCCCTAGTCCATGTGACACTTGTTTTAGGGCAAAGCAAACCCGAGAAGTTTTCTTTAACAGTTCAAATAAATCTAAAGAGTGTTTTGATATGATTCATTGTGACGTATGGGGACCATATCGTACTCGTTCCTCCAGTGGAGCAGTTTATTTTTTAACTATTGTTGATGATCACTCAAGGGCTGTATGGACATATCTCCTTCTTGAAAAATCAGAGGTTAAAACCGTACTCCAAAACTTCTGTGCAATGACGTCTAGACAGTTTGGAAAACCAGTGAAGATTGTTCGTTCAGATAATGGGACAGAATTTACTTGTCTTACACGATATTTTCGAGAACAAGGTGTGTTACATCAGACGTCGTGTGTTGCAACGCCTCAGCAGAATGGGCGTGTTGAGAGGAAACACCGACACATTTTGAATGTGTCTCGGGCATTGCTGTTTCAAAGCAAGCTACCAGTTAAGTTTTGGGGTGAAGCCGTCATGACAGCATCCCACTTGATTAACAGAACGCCTACTGAAGTTCTCAAAGGACGTTCTCCTTATGAAATATTGTATGGGATCAAACCGCAGTATGATCACCTTCGTGTCTTTGGAAGCTTGTGTTATACATATCGCCGGTCTCGTGACAAAGATAAGTTTGGGCCAAGAAGCAGGCGATGTATCTTCCTTGGTTATCCGTTTGGTCAGAAAGGTTGGAAGGTTTATGACTTGGATAAGAAGGAATTTCTTATCAGTCGGGATGTTGTTTTCTACGAGAATGAGTTCCCAATGGCCTCTGTTCAAGTTTCCCCACCTGCGCCTGATCCATCTTCGACGATCGTTTCTGATGAGGATTGGTTGCTACAAGCAGAAACGAATTTAGACGAAAGGGGGAGCAGTGATATACCCCCTGCGATCGAACAAGAAACAGAGATGTCTGATCCAGCTCATCTCCCCACCGCAACAGAACACGTTGAGGAACTTCAGGTTTCTTCACCTATAGTATCTGATACTCTTAATACAAGTCCAGAGTCTTCCACTCCAGAAGATCAGCTAGGACGTGGTCAGCGGGTTCGTGTGCCTCCAGCTAAGTTTCAAGATTATATTGCTTACAACACAGTCACCATAAAGAATACCCCTCTCGCTCCTCTTTCCGCTCAATCACTGTCCTCAGATTCGGTTCCTGGTAAGACACCGTATCCCCTGGTTGAATACCTTTCTGATGTTTCCTTCTCACCTGCGCATCAAGTGTTTCTCGCAGCAATAACTGCAGGTATAATACCGAAAAGCTATTCTGAGGCTGTAAAAGAGAAAGTATGGCGAGTTGCTGTTAAAGATGAGGTAGTTGCACTTGAAGACCAGGGCACATGGGATGTGACTTCGCTTCCACCAGGCAAGGTAGCTCTTGGTTGTCATTGGGTCTTTACGATCAAATATAACTCTGATGGGACCATTCGGCGTCACAAAGCACGTCTTGTCGTTCGAGGAAATCACCAAATAGAGGGGGAAGATTTCAATGAAACTTTTGCGCCAGTGGTTAAGATGACCACGGTTCGTGCGCTCCTTCGCATTGCGGCTGCTAAAAAGTGGGAGGTTCATCAGATGGACGTTCATAACGCCTTTCTTCATGGTGATCTCGAAGAAGAAGTTTATATGAGGTTTCCTCCAGGTTTTTCACATTCTGATCCTACAAAAGTGTGTAGGTTACGCAAGTCGTTATATGGGTTACGCCAAGCACCGCGTTGCTGGTTTGCGAAACTTTCTCAGGCTCTTACAAAGTTTGGTTTTGAGCAGTCCTATGAGGATGCCTCTTTGTTTATCTACATCAAAGGTGAAGTTGAGATAAGGGTTCTGATCTACGTTGATGATTTAGTCATTGCGAGCAATTGTTTGGAGCGGCTTGAGAAGTTTAAAACATACTTGGGTACTTGTTTTCATATGAAAGATTTGGGACGATTAAAATACTTCTTAGGCATTGAAGTTGCTAGATCAGATGAGGGTATTTTTTTATCTCAACGGAAGTATGTTCTTGACATCGTTGGTGAAACCGGTTTACATGGATCAAAACCTGCAGGCACACCTATGGAACAAAACCATAAACTCGCATCTGATGATGGTCCTCTGTTCTCGGATCCCGGTCAGTATCGACGTCTGATAGGCCGACTAGTCTACCTCGCTATCTCTCGTCCAGAGTTGTCATACTCCATTCATCTCTTGTCTCAGTTCATGCAGACACCTCGCCAAGCTCACTGGGATGCTGCCTTGCGAGTCGTTCGTTATCTAAAGGGGTCACCTGGTCAGGGGATTCTTTTGCGTGCAGATACCAATCTAGAGTTGTCTATATACTGTGACGCAGATTGGCAATCATGTCCTCTCACTCGTCGCTCTCTCAGCTCGTTTGTAGTGATGATGGGAGGGTCTCCCATTGCTTGGAAAACAAAGAAACAAGATACTGTGTCTCACTCCTCAGCTGAAGCGGAATATAGGGCGATGGCATGTGCGGTTAAAGAAATGAAGTGGATCGTACCTCTTGTCAAAGATCTTGGAGTTATAGCTTCTACACCTGTCTCTTTTTATTGTGATAGCCAAGCGGCTATCCACATTGCTTCAAATCCGGTTTTTCATGAAAGAACAAAACATATTGAGAGGGATTGTCACTGTGTTCGTGATGCTGCTCGTGCTGGTCTAATCTCAATGCGTCATGTTCGTACAAAGGATCAACTGGCGGACATTCTTACAAAGGCCCTCGGTCGACCTCAGTTTGATTTTTTGCTGTCCAAGTTGGGAGTTCAAGATCTTCACTCTCCAACTTGAGGGGGAGTATTAGGGAATAGAATATTCCCATTCT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_70Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
143Start:
5666856End:
5666998Strand:
+>A01_LTR-Copia_70
TGAGATTAGGATAACTTCCATTATATTGAGATAATTCCAATTCCGTTAAGGAATATCTTGTCTTTGGAGTTGTATATATACGATGTATTGTCAAACTTGTTCAATAAGAAAGTCTATTCAGAATATCGTTTCCTATCTTTACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_71Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
218Start:
6384808End:
6385025Strand:
->A01_LTR-Copia_71
TGTAAATCTCAAGACGTTACTTCTGGAAAACTGACTTGTTCATTAAAGAGAAATACAATGGCTATATAGCCTTACAGGAAACAGAGCGTGAAACAGAATGAACCAACTACTCCTAAGAAATAGCAAGCGTGATCCAAACACGATGACCACGTTTGACTGAAACAGAAACAACAAACTTCCTAAAGAATAGGACAAGACAACAACTTAAAACCCCAACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_72Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4226Start:
6385026End:
6389251Strand:
->A01_LTR-Copia_72
TTTCCTCCCCTAAACTAGACAGTCTACTAGTTTATGGTCGAAACATCACACACTCCTAGCTTCTTTCTGAAATCTTCAAATGCCTCCAGCTTGAGTGGTTTGGTAAATATGTCAGCAACTTGATCGCGTGTGCCACAGAACTTCAGCTGAACTTCTCCTTCATTGACCAAGTCCCTTAAGAAGTGAAAACGCACATCAATATGCTTACTCTTACCGTGCATCACCGGATTCTTTGATAACTTTATGGCCGAGCTGTTGTCGCAGAAAATCACTGGACTTGAACTTCCCTCATAACCAATCCTCTTCAATATCCTCTTCATCCATATCAGTTGGCATGTACTTGCAGCAGCTGCGACAAACTCTGCTTCTGTTGTGCTCAAGGTGACGATGGCTTGCTTCCTTGATGACCAAGCTACTGCAGCGTCGCTCAAAATGAAAGCATATCCTGATGTGCTCTTTCTGTCCTCTACACACCCTGCATAATCACTGTCTGTGAACCCAATAAGCTCTGAATTCCCTTTCTTCTGATAGAAGATTCCAAATGCAGTCGTTCCTTGAAGGTATCTGAGAATTCTCTTGGCTGCAGTAAGATGAAGTTCAGTGGGTTTCGACATGTACCTACTGATGAGACTCACAGCATACATCACATCCGGCCTTGTTGCAGTCAAATACATTAGGCTTCCAACCAGCTGCTTGTAGAGTGATTCGTCAACTCTCACGCCGTCGTCGTCTTTATGAATTTTGAATCCAGGAATGATTGGATTCAAAACTGAGTTACTCTCTTCCATTCCAAACCTCTTCAGCACTTCATTCACATACTTCTTCTGGCTTACAAATATTCCTCCATCAACCTGCATCACTTCAAGGCCAAGAAAATACCTCATCTCCCCCAAGTCTGACATATCAAACTCTCTCATCATTGATTCCTTGAACTTTCTCATCATCGTTTCATCACTCCCAGTGTATATCAAGTCATCAACATACAAGCTAATGATGAGAGTGTTACCTTGTTCATTAGTTTTGGTAAACAGCGTTTGCTCACTTGCGTCCTTCTCAAACCCCATCTTTCGAAAATAAGAGTCTATCCTGCTGAACCAGGCTCTTGGTGCCTGCTTGAGACCGTAAAGAGCTTTACGAAGCTTGAGGACTTTACTCTCTGCGTTCCTCCGTTCATACCCCTTTGGTTGCTCAACAAAGACCTCTTCTGTTAGTTCTCCTTGCAGAAACGCTGACTTCACGTCCAGCTGATAGACTGTCCAACCCCTCTGAGCTGATAGAGCTAAGATCATTCTGACTGTATCCAATCGTGCAACAGGAGCATAAACCTCTTCATAATCGATTCCATGTTCTTGAGCATAACCTTTTGCTACGAGCCTGGCTTTGTACTTCTCAACCTCTCCATGTTGATTCAACTTGGTTTTGAACACCCATTTGACTCCTATGCTCTTGGCTCCTTGTGGCAGATCAGTTAGAGTCCAGGTGTCGTTCTTCTCTATTGAGTTTATCTCGGAATCCATGGCTCGTTTCCAGTTTTCACTTTGGATGGCCTCCTCGAAGTTGACTGGATCTGTTCCTGCAAAGAATGCAAACTGAACCATCCCTTCTACAAACAAAGCAAACTGGGCCAGCTCATCTTCTTCATACTGATCTCCAGTGATATAATCACTTAGTCTTACTGGTGGTCTTGTCTGTCGCCTCCCCGACCCTCTTGAACTCTCTGCAACATCAGTTCGTGTAGTAGCAGTAGCCATTGAAGATGAGCCAGCAGTAGCCATTGGAGATGAGCCAGTGTTGGGATTCTCCACGATCTCATTGTCTCCATCTTCTGCTTCTGGTTCCTGACCAGCTACTTCTTCTGCATTCTCTCGACCGGCATCGTCTTGTGATTCTTCATTCTCCCACTCCAAGTCAACTTGAATTGATTCCTCATAAGTCACATCCCAATCCCACTTTTTATCCTCTTCAAAGATCACATCTCTGCTCACAGTTATCTTTTTGCTTGTGGGATCGAAGAGCTTGTATCCCTTTGATTCTGCGCTTAAACCAAACAGAACACCTCTGCGACTCTTGTCTTCAAGCTTTGTTCTGTGTACATCAGGAATGTGAGTATGAGCGATGCAGCCAAAAACTCTCAAGTGTGCCACCGATGGTTTGATTCCACTCCATGCTTCCTCTGGTGTAACATCCTTTACAGAGCTCGTTGGACATCGATTCAGAAGGTAAAATGCCCAGTTTACAGCTTCTGGCCAGAACACTTTTGGAACATTCTTCTCCACCAACATGCTCCTCACCATGTTCATCACTGTTCTGTTCTTTCTCTCTGCGACACCGTTGTGTTGTGGTGTGTATGGCGTCGTTAACTGCCTCTTGATCCCACTGTCTTTGCAGAACTCATTGAACTCACTTGAAGTAAATTCTCCACCACGATCTGTCCTTAAGCACTTGATGCGCAAGCCAGACTGTTTCTCTATGCCGCTCTTGAACTGCTTGAAAGTGGCAAACGCATCTGCTTTGTAAACCAAGAAGTATACCCACGCCTTTCTACTGAAATCATCGATGAAGCAGATCAGATACCTCTTTCCACCATTAGACGTTGGAGAGATCGGACCGCAGATGTCAGAGTAAATAAGCTCAAGTTTCTCTGATGCTCTCCAAATGGCTTTCTTTGGCATGATCTCTCGGTGTTGCTTCCCCTTTAAGCAATCAGTGCAGACCACCTCTGTTTCAGCAAAGTCTGGCAAACCATTCACCATCTCTTTGTTCTTTAGTGTCTTTAGGCCTGAGTAGCCGAGATGGCCATACCTTTGATGCCAGAGCATAAACTTGTCTTGAGCATCAGTTTGAAGACACATCATTGCCAGGTTGGTTTCATTCTTCGAGAATAGTGTAAACATTCTATTTGTTGTCATCTTGCTTTGGATGATGAGACCTCTCGAAGGATGATAGATTCTGCATTCGTTGGACTTTATCAGGATCTCCAACCCCTTCTCCTGAAGTTGTCCAATGCTGAGAAGATTATTCTTCAAGTCTGGAACATAGAGAACGTCTTGCACAAGGTGACTCACTCCTTCAATCGAGAGCCGTATATTTCCTGCTCCCATAACCTTCATTTGTGAGTGATTCCCTAGTCGGACCGTCTTCTTGATCCCTTCATTCAGCTCGCTGAAAAGAGATAACTCTCCACACATATGATTGCTGCAACCTGAATCAAGAAACCACACATCGTTGTGATGTTTCTTTTGTGGTTCCTCAATGTGTGCCATAAGAGACAGCTGAGAGCTCTCTACTTCTTCTACTTCTTGTATTTCTTCAACGTATGCCATGAGTAGCATCTCTTCCACCTCTTCCTCTGCGTAATTTGCTTGACACTCAGACTGAAAGTGACCAAGTTTGTGACAGTTGTAGCATTCAACTGTTGCCTTGTTGAAGATACGACGTCCTCTGCCTCGACCTCTTCCTCCACGGAACGCAAAACCTGATCTTCCTCTTCCTCTTCCTCCATGATAGTCATCTGTTACAGCAAGTGTTTGCTCTTCTCCACCATCCTTCTTGAACTTATGCTCATGCACAAGTAGAGAACTCTGCAAAGCATCAACAGAGAGGCTATCAACATCCTTTGATTCCTCAATGGAACACACAATGTAGTTCCATTTGTCAGTGAGGGTTCTCAGGATCTTCTCAACGATCTTGACATCCGGCATGTCTTCTCCACAGTTTCGCATCTCGTTTGCGATCACCATTACTCGAGTGACGTACACATCAACAGATTCACCTTGTTTCATCACCAAGATCTCGAAATCCCTGCGAAGCCTATTAAGCTGCGCCCTCTGCGCCCTCTGCACCCGAGCGTTCCCCTGGCACTTCATCTTCATCGAGTCCCACAGCTGCTTGGATGTCTCCTTCTGTGTTATTGTTTTGAGAATCGTCCTGTCGATGGATTGAAACAGATAATTCTTCGCCTTCAAGTCCTTAAGCTTCATCTCTTCAAGTGTGCTCCTCTGTGCCGCTGTCATCTCTACTCCAGCTGCTGGTTGTGTGTATCCTGATTCCACAACCGTCCAATACTCCTTGGAGCGCAGGAGATTTTCCATGACCATGCTCCAGTGTTCATAATCCCCATCAAATTTGGGAATTGCAGGCGCAGAGTAACCACCGTTGCCATTGCCTTCTCCACTCATTCTCTCTTTTCTTTCTCTCTCAATTTGAAGTAAGCTCTGATACCAGAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_73Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
220Start:
6389252End:
6389471Strand:
->A01_LTR-Copia_73
TGTAAATCTCAAGACGTTACTTCTGGAAAACTGACTTGTGTTCATTAAAGAGAAATACAATGGCTATATAGTCTTACAGGAAACAGAGCGTGAAACAGAATGAACCAACTACTCCTAAGAAATAGCAAGCGTGATCCAAACACGATGACCACGTTTGACTGAAACAGAAACAACAAACTTCCTAAAGAATAGGACAAGACAACAACTTAAAACCCCAACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_74Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
108Start:
6628142End:
6628249Strand:
+>A01_LTR-Copia_74
TAGGATTAGGATAAATATAAAACCCTATATCTATGGGATTTAGAATATTCATGTGTTTCCTTTTCCTAGCTAGGTTATGCTTCATACGTTGTATATAAATACACTTCT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_75Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4550Start:
6628263End:
6632812Strand:
+>A01_LTR-Copia_75
TTATATAGTATCAGAGCTAAGATCTTACCAAAAATTTCTATAATCAAACTCCTCAACGTTTGATCATATTTTTTTCTACTACTACTAAATCATCGACCAAGATGTCTACTGATTCTTCTACAAACCCGTTAATGGGATCTACTACTACACAAGGAGTTCCTCCTGTGCTTTCACCTTATTATCTACACCCGTCCGACAACCCTGGAGCACTCATTACATCGGTGCTTCTTACTCATGATAACTATCCAGAATGGTCAACGGAGCTTCGCAATTCCTTACAAGCTAAACAGAAATTTGGCTTCATCGATGGGACGATTACAAAACCAACTGATGACAGCCCTGATTCAGCACGGTGGCTTGCGGCGAACTCAATGATAGTCGGATGGATACGTACGTCTATTGATCCTAAAGTGCGTTCAACAGTTACCCATGTACCGGATGCGCACAAACTATGGGAGACTTTGCGGTTTCGATTTTCTGTTACAAACGGAACCAGAGTCCATCAACTTCAGGATGCTATTACCAACTGCAAACAGGATGGTCAATCCGTGCTTGAGTACTACGGAAGGCTAACAAAACTTTGGGAGGAGCTTCAGAATCTCAAAATCTCTCGTACTTGTACCTGTGCTGCAGCTGCAGATATCGAGAAAGAAAAAGAGGATGCGCGGGTTCACAAGTTTCTATTTGGTCTCGATGACTTGCGTTTTCTCTCTATTAGGTCAAGGATCACTGATGAGGATCCGTTACCCGACCTCAATATTGTCAACTCTAGAGTAATCCGTGAGGAACAGAACATGGTAGCTACTCGATCAAAGGAGCAACGGTCTGATGCTTTAGGTTTCTCAGCAAAGACCGAATCTTCTAAAGATCTTGCTGTTCCATCGGATTCTATAGCTTCACGTTCTCGGGATCCAGCTCGTACCTGCACACATTGTGGCAGGAAGGGTCATGACATTACTGAATGTTTCCTCGTTCATGGATATCCAGAATGGTTTCTTGAAAGACAGAACAATGCACCATCTGGAAATCGCGGTGGCCGTGGAGGACGGTTCAACTCGAACAGAGGACGTGGTAGAGGTCGTGCAAATGCAACGCAGGCGTCAACTTCAACTCAGTTCAATTCAGATCAAATTGCTTCTCTGATCACTCTTCTCCAAAACCAACAGAGCAATCTCTCGTCAGAACGGTTGTCTGGTAAAACTACACTTACTGATATTATTATTGATACAAGAGCATCACATCACATGACCGGGGATCTAGCATTACTTCACGATGTTCAGGATATAGCTTCCTCATCGGTTTTGTGTCCCAATGGACGTTATTCTCAGGCCACAAAACATGGCACTTTAAGACTGAGCAAAGACTATGCTTTGCACGAAGTTCTTTACGTCCCCGATTTTAACTGCACGCTGATCAGCGTCTCTAAGTTATTGAAACAAACAGGATGTATAGCGATTTTTACTGATACATTGTGTGTTTTACAGGACCGTTTTTCGAGGACTCTGATTGGAGCAGGTGAAGAACGTGAGGGGGTTTACTACTTTACGGGAGTCAAGGTTGCACGAGTACATGGGGCTACAAAGTCGACGACTAATTCTTCAGCTTTGTGGCACCGGCGTCTTGGACATCCGTCTTACAAAGTTCTTTCTGCATTACCGGCTTTTAAATCTCTTTCTATAGATTTCTCTGATTCTAGTCAATGTGATATTTGTTTTCAAGCTAAACAAACTCGGAAGGTTTTTCCAGACAGTCTTAATAAAGCTTCTTATCCATTTGATCTTATTCACTGTGATGTTTGGGGACCATATCGAACACCAGCTTCGTGTGGCGCAGTCTACTTCCTTACTATAGTAGATGATTTTTCTCGCGCAGTGTGGACTTATTTGATGCTTGAAAAATCTGAAGTTGCAACTTTACTAAAAAGCTTCTGCGCCATGTCTGAACGACAATTTGGTCGTCAAGTTCGCACCATCCGAACAGATAATGGTACGGAATTTACTGTCCTTCGGAAATACTTTCACGAGCATGGGATCTTTCACCAGACTTCTTGTGTTGACACACCACAACAGAATGCCCGAGTGGAACGGAAACATCGGCATATCTTGAATGTGGCGCGTGCTTGCTTGTTCCAGGCTCGACTACCTACTACTTTTTGGGGAGAAAGCATTCTTGCAGCGGCTCATCTGATAAACCGAACACCCACACCTATTCTTGACGGTAAAACACCTTACGAAGTGTTTCATGGAAAACCTCCAGCCTTTGATCAACTACGAGTGTTCGGGTGTCTTGCCTATGCACACCGCCGAGCAAGAGATAAAGATAAATTTGGTGCCAGAAGTCGCAAGTGTCTATTTGTTGGTTACCCATTTGGAAAGAAAGCCTGGCAGTTATACGATATGGATACGAATGAGTTCTTTATCAGCCGTGATGTTACTTTCTGTGAAGACAAGTTTCCCGGCATTGACAATACTACTTATGTGACACCTCCAGTAATGCAAGATAACTCTTTTGATGATTGGCTTGAGTCGACTATGCATTCCAAGGGGAGCACTGTTGTTCCACAAACTGAGACAACAATACCCGTAACAACAAACTCTCCATCGACTGCAACTTCTACTGACATAACGAACTCATCTCCTTCATTGCCGACTCCCATAAATAATACTACACCTCAGGAGTCGACGCCCTCGTCTCCAACTACACCTCCACTTCCAGTCTCTCCTCCTGCGTTACCGAACCCAGAGCGTACAGAACAGAATCAGTCGCCGGGTCTTCTGGAAATACTTGGTCGTGGGCAGCGTGCTAAGAAGCCATCGATTCTTCTCAAGAACTTTGTAACACATGCTACTACCTCTACAAACCCCTCTCACGTTCACACTACATCTAAACAGAGTTCTCTACCAACGGTTTCAGGTAAAACACTGTATCCTATCGCTGATTACTTAACCTCCTCTGTTTTTTCAGCGCAACATCAGGCGTTCCTTGCTAATATTACATCGGAGTATGTTCCGTCCACCTTCCAAGAAGCTATACTTGACGAACGTTTCAAAGGTGCGATGAAATCTGAGGTTACTGCACTAGAAGACAACCACACATGGGATGTCACTACGTTACCTCCAGGGAAAAAGGCAATCACTTGCAGATGGCTTTACTCCAACAAATACAAGGCTGATGGGACAATAGAACGTCCTAAAGCTCGCCTAGTGGCTCATGGAAACAGACAGAAGGAGGGCCGCGACTACAAGGATACATTCGCTCCTGTGGCAAAGATGAACACAGTTCGTTTTCTACTTAAAATAGCAGCAGCAAAACGATGGGAAGTACATCAGATGGACGTCCACAACACATTCTTACATGGGGATCTCGAAGAAGAGATCTATATGCACTTACCACCGGGTTTCAAAACAGACGACCCTACTAAAGTATGCAGGCTTCGGAAATCACTTTACGGTCTGAAACAATCACCTCGCTGTTGGTTTTCTAAACTCAGCAAAACACTCTTGGATTTTGGCTTCACCCAGAGTTATGAGGACTACTCTCTATTCTCATTTATCGAAGGCAATATATGTCTCCACATATTGGTGTACGTGGATGACTTCATAATTGCTGGGAATGACATCTCTACAATTCATCGGTTTAAGACTTATCTCAACAAAAACTTCAAGATGAAAGACTTAGGTAAACTCAAGTATTTTCTTGGTTTGGAAGTGGCAAGAGGACCTGAAGGAATGTTTGTCTCCCAGCGCAAATATGCTTTGGATATTATTGCCGAATGTGGGCTTCTCGGTGCTAAGCCTTCTTCAGTTCCTACTGAGCTCAATCATAAGCTCCCACTCTCTAAAAGTCCGCTGCTTATTGACCCTGGCAAGTACAGGCGTTTAGTGGGTCGCTTGATCTACCTAACCTTTACTAGACCTGAGTTGAGTTATATCGTGCATCTCCTCTCTCAGTTCATGAAGCAGCCTCGTGAGGATCACTGGCTGGCAGCCTTACGGGTTGTTAGGTATCTAAAAGGGACTCCGGATCAAGGCATCATGTTAACCTCTAATGCTGATATGCAACTCACGGCGTACTGCGACGCGGACTGGTCTGCTTGCCCAATTACTCGACGTTCCTTAAGTGCTTATGTTGTTCTTCTTGGAGATTCCATTGTGTCTTGGAAGACGAAGAAACAACGCACAGTTTCCCGCTCGTCAGCTGAAGCCGAATACCGATCTATGGCTGACACTACCTGCGAACTAAAATGGCTCAAACGATTACTTTATCAGCTTGGATTTTCGCATAATCAACCAATGAAGATGTTCTGTGACAGTCAATCTGCGATTCATATTGCAAAGAATCCAGTCTTCCATGAAAGAACTAAACACGTCGAAAATGATTGCCACACAGTTCGTGACGCCGTACAAGCCAAGCTTCTTACTACTGAACATATCTCTACTAAGCATCAACCTGCGGATCTTCTGACCAAGGCTTTGCCTACCCCGACATTTGATTACTTGCTGTCTAAGTTGGGCATTCGGACACTTTCAGCGCCAACTTGAGGGGGAGTA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_76Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
102Start:
6632814End:
6632915Strand:
+>A01_LTR-Copia_76
TAGGATTAGGATAAATATAAAATCCTATATCTATGGGATTTAGAATATTCATGTGTTTCCTTTTCCTAGCTAGGTTATGCTTCATACGTTGTATATAAACAC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_77Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1767Start:
6772316End:
6774082Strand:
->A01_LTR-Copia_77
CTCCCCCTCAAGTTGGAGCGTGTAAATCGCACACGCCAAACTTGGACAACAAGTAACTAAATGCAGAACTTCCCAACGCCTTTGTTAATATATCAGCCAGTTGCTCAGTCGTCCTGACATGTCTCGTAGCAATGAGCTTAGCTTTAACCCCATCTCTTACACTATGGCAGTCCTTTTCAACATGTTTAGTACGCTCATGGAACACTGGGTTTGCTGCAATGTAAATGGCTGACTTGCTGTCACAGAACAAGTCCATAGGTGCATTGTGCTGAACTCCAAGGTCTGCTAACAGCCTCTTCAACCACTGAAGTTCCTTCAAGGCGTCTGACATAGCCCTATACTCTGCCTCCGCCGACGAATGAGACACCGTGTCCTGCTTCTTCGTCTTCCAGGCTATCGGTGAGGTTCCCAACATCACCATATATGCAGATAGAGATCTTCTAGTTCGCGGACATGAGGCCCAATCGGAGTCACAGTATGCTCGTATATGCAAGTCGCAATCTGCTTTCAACATTATACCCTGACCCGGAGAACCTTTTAGATATCTTATAACTCTCATTGCTGCGTCCCAATGTGCTTCTCTTGGCGCATGCATAACCTGAGAAAGAACATGAACTGAATAACACAGGTCTGATCTAGTGATTGTCAAGTAGACCAGACGTCCAACCACTCTCCGAAACTGCGCTGGATTCTTACACAACGGACTCTTATTTCTCAGAAGTTGGTGATTCACTTCCATTGGTGTGGCCACCGGCTTGCTCCCCAACAGACCAGCTTCATTTATAATATCCAATGCATATTTTCTTTGAGATAGATACATTCCCAAAGGTCCTCTTGCAATCTCTATGCCAAGAAAGTACTTTGCCTTACCAAGATCCTTCATGTGAAAAATCTCACTCAACTTCTTCTTGAACTTCTTGATCAGTTCAAGATCATTCCCTGCCACAATTAAGTCATCCACATAGACCAGAACTCTTATACTCTTCTCTCCCTTCACGTAATAGAACAATGAATAATCCTCATAAGACTGCACAAATCCAAGCCTCTCAAGCGCCTTTGATAACTTATCAAACCAACACCTTGGCGCCTGCTTTAACCCGTATAAGGACTTTCGGAGCTTACAAACCTTGTTAGGATCATCTGACTGAAATCCCGGTGGCAATCTCATGTACACTTCTTCTTCCAAGTCTCCGTGCAAGAACGGGTTGTGAACATCCATTTGGTGCACCTCCCAGTTCTTTGCTGCAGCAACTTCCAGCAGTGTGCGCACGGTATCCATCTTTGCAACAGGCGCAAAGGTTTCTTCATAATCTTCTCCTTCAGTTTGCTGATTGCCACAACAAACCAGTCTTGCTTTGTATCTTTCTATTGTTCCATCCGCATTGTACTTAATAGTGAACACCCATTTGCATCCTATAGCTTTCTTTCCTGCAGGAAGATCAACCACATCCCATGTCCTGCTAAGCTCAAGCGCAGTTACTTCTCCTTTCACTGCTTTGTTCCATCTCTTATCTCCAAACGCTTCTTTGTAATTTTTCGGTATCACACCTGCACTGACCGCTGCAAGAAACGCTTGGTGGTGGTCTGAGAAGGAATCATCAGTCACATAATCTGTGATAGGATACACGGATTGTTTCTTACCTGACCAGTTCGTAGAGGCCTCTGACTGCAGACCGGTGACGGTGTTATGTTTATCGGGGCACACTTGAGCATTATATGTAACGTAGTCGCGCAGCTTGACTGATGGGATCGATCTCCTATGTCCTC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_78Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
2266Start:
6774335End:
6776600Strand:
->A01_LTR-Copia_78
CCTCATCGAACACCACATCTCTTGAGACAAAGAACTCATCCCTGTCAAGATCATACAACTTCCAACCCTTCTTTGCGTAAGGATATCCCACAAACACACACCTTGCACTGCGTACTCCAAACTTATCCTTATCTCTCCTTGATTTGTGCGCAAAGCACAAGCACCCAAATATTTTAATATCATCATACAAAGGAGGTTTTCCGTACAAACATTCATATGGTGTTTTACCTTTGAGCAACTTTGTTGGCGTTCTATTTATAAGATGAGCTGCTGTCAACACACTCTCTCCCCAAAACTTTACAGGAAGATTAGCATGAAACAAGATCGATCTTGCCACATTCAAAATGTGACGATGCTTTCTCTCCACACGTCCATTTTGCTGGGGTGTCACCACGCATGAAGTCTGATGCACGATTCCGACCTCTGTGAAGAACTTAGATAGGCACATGAACTCACTCCCATTATCACTTCTCACGATCTTAACTGTCTTGCCAAACTGACGAGTTGCAAGAGCAATGAAGTTCGGGAGAACTGTTTTGACTTCTCTTTTCTCTAGCAGGAGATGAATCCAAACAGCTCTGGAGAAGTCATCCACAATCGTAAGAAAGTAGACTGCTCCACACGAAGATGGTACTCTATAAGGACCCCAAAGGTCTACATGAATCAACTCAAATGATGAAGAACTTTTATTAAGACTTTCAGAAAACATTTCTCTGGTTTGTTTGGATTGAAAGCAAATGTCGCAGCCACCAAACTTATTCAACACATCTTTAACACTAGAAACAAAAGGTAAAAAACTCAAAACACCATAAGCAGGATGTCCCAGACGACGATGCCACACAGCCTGATCCTCTGAAGCTTTAACTCTGTGTCCTCTCGCGACCGTGACATCCCGATAAACATAAACTCCATTTTTGACTTCACCGGCTCCAATCAGAGTCCTCGTAAAACGGTCCTGCAAAATACACAATGTATCTGTAAATACGGCTAAACAACCTGTCTGTCTAAGCAACTTCGCCACAGACAACAGAGTACAATTCAAATTAGGAACAAAAAGAACATTCTCCAAAATCAGTTTCACCGACAACCGCAAACTACCACTCTTGGTCGCCATCACATGACTCCCATCAGCGAAGCTCACAGGACAGGGTATAATACTTCGGACATTGCTCAATAAGAACACATCCCCTGTCATGTGATGCGATGCTCCAGTGTCAATGATAACCTCACCAGTTTGTACCGTACCGTTTAACCTGTCTGGAATAGGTGCTGGCTTCTGGCTTTCAAGCAACGAGGCGAGAGATGCCCACTGCTCTGCACTCAGCTGCGTCACTTGTGATCCTTGATTACCAGACGAAGACGCACTCGGTGTTTGCACTGCATTAGCTCTCGACGAGTTCATTCTTCCTCGTCCTCTGCCTCTGCCACCTCTTCCATTCGCCTGATTCCTCTCAGTAAACCACTCCGGAAAGCCTATAATTTGCCAACACTCCTTCTTCTCGTGTCCGGTGCGACCACAATTCCCGCAGATGATAGAGTTACGACCTCTGGCCACACCTTCGTCTCCTTCTCTCTGTATTGTCTTTGCTACGAACCCCACTGGAGCCTCCTTTGTTTCAAGACGCGCTCCCCCAAGTCTCTTCTCTTCTCGAACTACTCTTTGATATGTCGAGTTAAGATCAGGGAGCACCTCCAAACCAATAATGTTAGCGCAGACATTGCTAAACCTTGCTTCATCTAGGCCCATAAGAAATTGATGAACCTTCTCTTCTTCATATTCCTTGACATACACGTCAGCCGCTTCACACTTACACTTAGGAATCGGCTTGCAACTCAACAGCTCCTCCCACTTTTGAGATAGTCTTCCAAAATAGTCCATAACAGTGGATCCATCTTGTTTACATGAAGCCAACTCCGCCTTGAGCTGATGTACACGCACAGCGCTCCCCACCGAGAAGCGTTTCTTCAGCTCCGACCACATCTTGCACGCATCGGGAGAGAAAGGAACCGTTGATCGCAACACCGGAGAGATCGAAGCCCTGATCCACCCCACGATCATGGAGTTCACTGTCCTCCACATCTCAGCTTCCACCGGCTTCTCCGTTTCATCTGGAATCTTCAAGCTTCCATTGACAAACCCTATTTTTCGCTTGGCACGCAAGGCGTTCTCGAGCTCTAACGCCCACTCAGCATAGTTCTCCCCCGTGAGCACCACTGGAGAGATCGACGTTGCTGGATTGTCCGCAGGCGCGAGATAATACGGGGA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_79Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
247Start:
6846693End:
6846939Strand:
->A01_LTR-Copia_79
ATGTGGCATCATCCTGCATCCTCTAGTGAATCAAGGGCTGCAAATCGGTTGGACAATGCAGGACCACCAGGCGTTCCCATACTTGACGTCGCTATCCTCTTTCCTCTGCTCTTCTCCTGCCATGCTCTGTTTTTGTCCTTGACTGATAGAACCGTTGGAGAAGGTTTCTGAATAGAATTGCGCTTTCCGACAAGACGGGTTTGAGTGGACTTGGGCTTCTTGCTTCTTGAAGCTGCATCGTTTTGAG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_80Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
150Start:
6870517End:
6870666Strand:
->A01_LTR-Copia_80
TGTAAATCTAGCACTCTAGATTCTGAAAAGACTTTCTTATTGAACAAGAATGTACAAGACAATGTATTTATACCAAAAGACTCGACAAAGAATTGTTAAATATTCTACACCGACTTTGAATGTTTCCTAAACAGAAATGGAAACATCCTA