ID Class Order Superfamily Length Start End Strand View
A01_LTR-Copia_41 RetrotransposonsLTRLTR-Copia32642256814226006-
A01_LTR-Copia_42 RetrotransposonsLTRLTR-Copia12742422724242398+
A01_LTR-Copia_43 RetrotransposonsLTRLTR-Copia435642423994246754+
A01_LTR-Copia_44 RetrotransposonsLTRLTR-Copia12742467554246881+
A01_LTR-Copia_45 RetrotransposonsLTRLTR-Copia16543368274336991-
A01_LTR-Copia_46 RetrotransposonsLTRLTR-Copia16143370354337195-
A01_LTR-Copia_47 RetrotransposonsLTRLTR-Copia16243380214338182+
A01_LTR-Copia_48 RetrotransposonsLTRLTR-Copia22344082164408438-
A01_LTR-Copia_49 RetrotransposonsLTRLTR-Copia164044085264410165-
A01_LTR-Copia_50 RetrotransposonsLTRLTR-Copia225244104024412653-
A01_LTR-Copia_51 RetrotransposonsLTRLTR-Copia22344126834412905-
A01_LTR-Copia_52 RetrotransposonsLTRLTR-Copia20146343404634540+
A01_LTR-Copia_53 RetrotransposonsLTRLTR-Copia413746345754638711+
A01_LTR-Copia_54 RetrotransposonsLTRLTR-Copia20146387144638914+
A01_LTR-Copia_55 RetrotransposonsLTRLTR-Copia416746538784658044+
A01_LTR-Copia_56 RetrotransposonsLTRLTR-Copia26346650834665345+
A01_LTR-Copia_57 RetrotransposonsLTRLTR-Copia416946653464669514+
A01_LTR-Copia_58 RetrotransposonsLTRLTR-Copia26346695154669777+
A01_LTR-Copia_59 RetrotransposonsLTRLTR-Copia14947696994769847+
A01_LTR-Copia_60 RetrotransposonsLTRLTR-Copia455147698484774398+

< 3 4 5 6 7 > Total 876


Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

326

Start:

4225681  

End:

4226006

Strand:

-

>A01_LTR-Copia_41

GCTCTGATACCAAATATTGAAACTTAGTATCCGATTGTTCTCTGTGTATGCGAATGAAGATTAAGAATAACTCTCTTATATTAAGCTCTTAAGGCAAAACTCACTCAAAACCTTTTGTTCCTCAAACTCATACAATCACATCATAACTCGATGGATGTATATATATATAGCTAAACACAAATCCTAATCCTACTAGTAAAGATATGCTTATAGATAACTCCTAAAACATCTTTATCTTAATCCCCAACATTATCGGATTAGAACTTTGCTTAGCTTGGCCGGCAAGTCTTCACGCTTGATCCAATAACTTCATGCTTACTCCAACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

127

Start:

4242272  

End:

4242398

Strand:

+

>A01_LTR-Copia_42

TGTATATATATGTAAATATAAATAGTAGAGGATCTCTATGTAATTAGTCTACTCCTAAACCCTACTCTCTATGTATATAAATACTCTACAAAGGCTCTAATAATATTATCACTTTCCATAATCTACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4356

Start:

4242399  

End:

4246754

Strand:

+

>A01_LTR-Copia_43

TGGTATCAGAGCTTATGCTCCTAAACCTAGCAAAACTTTTCTAATCTCAAACTCAAGTCGTCATGAGTTCTTCCACCAACACCACCGAGGCAATCTCGCTCAACCCCAACACGCTGCTGCATATCAACATGTCAAACGTTTCTAAACTCACAAGCACCAACTACCTCATGTGGAGCTTGCAAGTTCATGCCCTCCTGGATGGTTATGCTCTCGCAAAGCACCTTGACAGTTCCCCTGTTGTCCCACCACCAACACTCACCACTGGAGATGATGTCACAGAGAACCCTGAGTTCGTATGCTGGAATCGCCAAGACAAACTCATTTACTCTGCTCTCCTTGGTGCCATAACTCAACCGATCCAGCCAACCGTGTCACGCACGACAACTGCGTCACAAATCTGGGAGAAGTTAGCTTCGATCTATGCCAAGCCAAGCCGTGGACATATCAAACAACTCAAAGATCAACTGAAGAACTACACTAAAGGTACTAAGTCCATTGACGAGTACCTTCAAGGCGCCGTCACCAAGTTTGATGAACTTGCACTCTTAGGCAAGCCTTATGATCATGAGGATCAAATTGAACTGCTACTTGGAGGCTTACCTGAGGAGTACAAGAATGTGGTTGATCAGATTGAAGGCAAAGACGTTGCTCCGAGTGTCACTGAGGTCCATGAACGCCTGTTGAACCATGAAGCAAAACTCCTTGCTGTTCGTGATACCACAGCATCGGTGATCCCTACATCGGCCAATGCGGTTCAACATCGACATAATTACTCCACCAACCGCAACAACAACAACAACAATAACAGGCGCTACAACAACAACTCCTACAACAGCGACACCACTCAGCAACGTTCGGATACACGCCCATTCAAACCTTACTTGGGTAAGTGTCAGTTCTGTAACACTCAGGGACACAGCGCCAGACGTTGTCCTCAGCTTCAGGGTCTCCAACCTGCTCTCAACCAACAAGCAACCAGTCCTTTCCGTCCTTGGCAGCCGCGTGCTAACCTCGCTATGAACTCGGGTTATCCAGCAGCGAACTGGCTCTTGGATTCTGGTGCTACCCACCATATCACCTCTGATCTCAACAACCTTGCTTTCCACAACCCGTATCAAGGAGGAGATGATGTCCTCATTGCTGATGGGTCAGGTCTACCCATAACCCATACTGGTTCATCTACTCTCTCAACCCCTACTCGCGATTTATCATTGAAAAACATTCTATGTGTTCCTCATGTTGATAAAAATCTCATCTCTGTATATCGTTTATGCAACACTAATGGTGTTTCGGTGGAATTTTTCCCTGCTGCATTTCAGGTGAAGGATCTCAGCACGGGGGTCCCATTGCTCCAAGGAAAGACTAAGAATGACTTGTATGAATGGCCGGTTCACAACTCCTATCCAATGGCCATGCTCACATCGTCCAACCCCAAAACATCTATCTCTTCGTGGCATTCTCGGCTCGGCCACCCTTCTTCTTCTATTTTAAACACTATTGTTTCTCAGTTTTCTCTTCCTATTGCTTCCAGTACTCAAAAACACTTGTCTTGTTCTGATTGTTTAATTAATAAGAGCCATAAACTGCCTTTCACAAACTCCTCTATTCTCTCATTTCGACCTCTTGAATACATTTTTAGTGATGTCTGGTCCTCACCAATTCTTTCAGTTGATAACTACAAGTACTATGTGGTTTTTATTGATCACTACTCGAGATATACATGGCTCTATCCTCTGAAACTAAAATCGCAGGTGAAAGAGGTGTTCATTGCTTACAAAGCACTGGTTGAAAACAAGTTTCAGACCTCCATTGGCACACTGTTCTCGGATAATGGGGGTGAATACATTGCCTTAAGAAGTTTTCTTTCTACTCACGGCATCACACACCTGACCTCACCGCCTCACACACCACAACACAATGGTCTCTCGGAGAGAAAACACCGCCATATTGTTGAGACTGGCCTTACCTTGCTGTCCACGGCATCGATACCAAAGAAATACTGGACGTTTGCCTTCTCTACGGCCGTGTACTTGATCAACCGTCTCCTCACCCCTACTCTCTCGATGCAATCGCCGTTTCAGATATTGTTTGGAGTAGCACCAAACTATGAGAAGCTGAGAGTGTTTGGGTGCTTATGCTTCCCTTGGTTGAGACCATACAATGCTCATAAGCTTCAAGACAAATCTCAACCTTGTGTCTTTCTTGGATATTCACCAACTCAGAGTGCTTACTTCTGTCTTGATCGCACTACAAACCGCATATATACATCTCGCCATGTCCAGTTTGTCGAGACATTGTTTCCATTCCAAGAAAAAGTACCGGTTAGTGATCCACAACCCACGAGCACACCTCCTGCTCCAGCCTCTGTTGCTACAACGATTCCGGTCAACAATGTCATGCCACAGCAACAAATGGGACCCGTGCCTGAGACTCTTCACCCCACTGCTCCTCCTCCACCGCAACCTCAGGTATTACCTTCTCACTCTTCACCTACATCATCTTCTTCCTCCTCAGAGCCCACTGCTCTTTCTCAAAATGAATCACAAACCCCGATTCAGCCAAACCTTGCTCCTTCCAATGAGCCCACTGCTCAAGAACAAAATTAGTTGCAACCCCCAACTCAGCAAACACAACAAGAAAATATATCCCAAACACAATCACCCATGTCAGTTCAACCTATTGAACCAGAAAATCCAGCTCCTGAAAACCACCAAAATATCCATAAAATGAAAACCAGGGCCAAAAATAACATTACAAAACCTATCCAAAAGTTAACTCTTCATCTTGCAGGACCCAAGCATCAATCTCCAGAACCAACAACAATTATTCAAGCTATGAAAGACAAAAAGTGGCGAGATGCTGCCATTGCAGAGTTTGATGCACACATTGTCAATCACACGTGGGATCTTGAACCACCATCACCGGATCAAAATGTGATTGGATGCAGATGGCTCTTTACAACCAAGTATCTCTCTAATGGCCAGGAAGAACGTCGCAAAGGAAGACTTGTTGCCAAGGGATATACACAACGATATGGAGTAGATTATTCAGAAACATTCAGTCCTGTTATCAAGTCTACCACCATCAGACTTGTCATCGAAGTTGCAGTAACAAAATCATGGACCTTGAAACAGCTGGACATTAACAATGCATTCCTCCAGGGTGATCTCACTGAAGTCGTCTATATGATGCAGCCACCCGGTTTTGTTGATAAAGATCGTCCTGATCATGTCTGTCGCTTGAGGAAACCAATCTATGGTCTTAAGCAAGCCCCACGCTCGTGGTATCTCTCGCTCAGACATCATCTTCTCACTATCGGCTTTATAAACTCCACTGCTGATGCCTCGCTCTTTGTTCATACACATGGCCATATTGTCACATATGTTCTTGTATATGTTGATGATATACTTGTGACTGGAAGCGACCCTGCTGTTGTTCAACAAGTTCTACAATCTTTTGCTGAAAGATTCTCCATCAAAGACCCGGTTGATCTACACTACTTCTTGGGCATTGAAGCAGTTAGGACTCCTCAAGGACTCCATCTCATGCAAAGAAAATACGTCAATGATCTCCTCAGTAAACAGAACATGGTAGACGCCAAGCCAGTGTCGACTCCATTACCAACCTCACCGAAGTTGACACTTTCTGGTGGAACTCTTCTCACTGATGCGGCTCCTTATAGATCGCTTGTTGGTAGTCTCCAGTACTTGGCATTTACTAGACCGGACATCTCCTATGCTGTAACTCGTCTCTCACAATTCATGCATCAGCCGACTATGGAGCATTGGCAGGCAGCTAAACGTGTACTCAGATACCTTGCCGGTACTCGCAGTCATGGTATCTTCTTTCACAAGAACTCTCCACTGGCACTACATGCTTTTTCCGATGCAGACTGGGCCGGTGACACTGATGATTACGTCTCCACTAATGCCTACATCATTTATCTAGGACGAAACCCGATTTCTTGGTCATCTAAGAAACAGAATGGTGTTGCTCGCTCATCAACGGAAGCAGAATATCGAGCTGTTGCCAACACAGCTTCAGAGGTAACATGGCTTTGTTCCTTACTTTCTGATCTTCGCATCGACCTTCCCACTACACCGGTTATCTACTGTGACAATGTTGGTGCTACCTATCTCTGTGCCAACCCGGTTTTTCATTCTCGTATGAAACATATTGCATTGGACTATCACTTCACGCGTAACATGATACAAGCTGGCCAGTTGCGGGTTGCTCACGTTTCCACTAGAGATCAACTCGCAGACGCATTAACCAAACCACTCCCGAGGAATCATTTTCATCAAGCTTGCAGCAAGATTGGAGTGACTACAGCCCCTCCATCTTGAGGGGGCGTAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

127

Start:

4246755  

End:

4246881

Strand:

+

>A01_LTR-Copia_44

TGTATATATATGTAAATATAAATAGTAGAGGATCTCTATGTAATTAGTCTACTCCTAAACCCTACTCTCTATGTATATAAATACTCTACAAAGGCTCTAATAATATTATCACTTTCCATAATCTACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

165

Start:

4336827  

End:

4336991

Strand:

-

>A01_LTR-Copia_45

ACTGGGAAAAGTGCCAATTTCGACCCAAACTATTTCAGTCGTGCCAAATACGACCCGAACAATTGATCAGTGCCAAATACGACCTCAACTCAATTATAATTCAAAAAAACTACCTGAACTTCTTAAAACGTGCTTAAATCTACATTGACTCTAACAGAAGTTAGT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

161

Start:

4337035  

End:

4337195

Strand:

-

>A01_LTR-Copia_46

AAAGTGCCAATTTCGACCCCAACACTCTTAATCGTGCCAAATAAGACCCGAACAAATAGTCAGTGCCAAAAACGACCTCAACTCAATTATAATTTAAAAAAAAATTATCCAATTTTTTCTAAAACGTGTCTAAATCTACATTAACTCTAACAGACGTTAAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

162

Start:

4338021  

End:

4338182

Strand:

+

>A01_LTR-Copia_47

ACTAACTTCTGTTAGAGTCAATGTAGATTTAGGCACGTTTTAAGAAGTTCGGGTAGTTTTTTTGAATTATAATTGAGTTGAGGTCGTATTTGGCACTGATCAATTGTTCGGGTCGTATTTGGCACGACTGAAATAGTTTGGGTCGAAATTGGCACTTTTCCC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

223

Start:

4408216  

End:

4408438

Strand:

-

>A01_LTR-Copia_48

TGAAGAAGATAACGTTTTATTCAAAGTTTCTTGCTTGATTACAATGGTTACATAACATCTGAATATATAGTAAAGCTGAGAGACCAACTAGGGAACAGCTCAGCATGTGACAGCACATAGCTTTAAGGAATCAAATCTGTTACACAGCTGTGTGACGTGAGCTGGAGCAGCCGTACGGAGACCGTAGTTTGGCGTCATCTGCTTTGGTCCTCTGTTACCGTTG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1640

Start:

4408526  

End:

4410165

Strand:

-

>A01_LTR-Copia_49

CACCCCCGCAAACTTGTGGTGGGAGCTGCCACAACACCAAGTTTGTCCCTCAGTCTACAGAAGGGCTGTTGCGCAAGGGACTTAGTGAAGATATCAGCCAGTTGTTGAGCCGCTGGAATCTGATTCACAACCAAAGCACCTAACGCCACTCGTTCGCGAACATAATGAAAATCTGTGTCAAAGTGTTTTGAACGAGTGTGAAGAGCTGGGTTCGCAGTTAGGTAGACTGCAGACAAATTATCACAGAATAGCTGAGGAGTGTCCGGAAGCGAAATACCCATTTCACCGAGGAGAGATGCCAACCACTTTAACTCAGTTGCAGTAATCGAGAGAGTACGGTACTCAGCTTCTGTGGACGATCGTGAGACCGTAGGATGGCGTTTTGCTGACCAGGAGATGATATTGGAACCGAGGAAGGTGCACATTCCTCCAGTTGATCGTCGAGTCTCTCGACACCCTGCCCAGTCGCTATCACTGAAACCATAGAGTAGAAATCCTGTCTTTGCATTTATCGTAAGACCTAGGTGAGACGTGCCCTTTAAGTAACGCAGTATGCGGCGAAGGTTGTGAAAATCTGCCACTGTCGGAGCATGCATCTTCTGACAGACGTAGTTAACTGCAAACTGACTGTCCGGTCGCGTTAGTGTCAGATACTGAAGCTTACCAGCGAGGCTCCGAAAGTAAGTAGGTTCATCAAACAGTTTATCTTGACCAACAACACGATCAAGCTGAAGAGGCAGAGGAGTAGAAGTAGAATCACAACCCGCCATGCCAGCTGTTTCAAGTAGATCCTGAGTGTACTTCTCTTGGCATAAGAACAGACCCTCTGAATAATTCTGGACTTGAATGCCAAGGAAGTAATGGACTGGACCCATATCTTTCATGCGGAAAGTTCCGTTAAGGGTAATCATCAGCCTTTTGATCAATTCTTCATTGTTCCCCGTCAGTAGCATATCGTCGACGTACAAAAGCAAGTAGATAACATCTCTGCCATGAAGATAGACGAACAGAGAAGGGTCACCATGTGTACATTTGAAGCCAAACTCGAGCAAGAATGTACTAAACTTGTCGAACCAAGCTCGTGGTGACTGTCGCGGACCATATATTGATTTACGAAGCTTATAGACGTAATGTGGTCGAGTCTTGTCTTCAAATCCCGGGGGTAGCTTCATGTAGACTGTCTCTTTGAGATCCCCGTGGAGATAGGCACTTTCAACATCTAACTGACGGATGTTCCAACCTTTGACGGAGGCAATATGAAGAACAGAGCGTATTGTTGCAGTGCGAACAACGGGGCTATAGGTCTCAACAAAATCAACACCCTCTTCTTGTTGGTTTCCTCTTGCCACCAGACGCGACTTGCGGTTCTTCAAGCTACCATCAGCGTTAAATTGAGACTTAAAAACCCATCCACAGCTTATCGGTGCAGCGTTCTCTTCAGGAGGGACTAGGTCCCATGTATGAGTGACTTCCATGTTATTAATTTCTTTTCCCATGGAAGCTGTCCATTTTGGATCTTTCAGAGCCGCAACCACTGACTTCGGCTCAGGATAACCGTTCTTGACACTCATTAGTACGTAACGCGGGTTGGGTTTCCTGATACCATCCTTTCCTCTAGTGACCATAGGATGAACAGGAGC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2252

Start:

4410402  

End:

4412653

Strand:

-

>A01_LTR-Copia_50

TCTCATATGGAAACGTTTTCTCATCAAACAGGACATGTCTACTGACGTAGACTCTAGCAGTAGGTGGATGCAAACATCTATAACCTTTGTATTTTTCACTGTATCCAAGAAAAACACAGTGTAGACTCTTTGGATCAAACTTGTTCTTCCCGTAAAGACGAAGAAAGGGGTAACAACTGCTCCCAAACACGCGGAGGCTCGTGTAGACAGGCTGTGTGCCGACAAGCACTTCATAAGGACTGATATTACGAGGGAGAGTCGACGTAGGAAGCAAGTTCAAAAGATATACAGCAGTGAGAAACGCATCAACCCAAAGTTGCTGAGGTACTTTGCTCTGGAACATGAGAGACAAACCGAGTTCAGTCACATGTCGATGCTTCCTCTCAGCAACGCCATTTTGCTGAGGGGTATGAGGACATGACATGTGATGCTTGATGCCACAAGAAGATAGATACTGAGTGAACTGATTACTTGTAAATTCTCCACCTCCATCACTTTGAAAAATTTTAATATCTGATTCTAACTGATGTTCCACTGATTTCTTAAAGCTCAAGAACACGGAAAAGAAATCTGATTTCATTCTCAAAGGGTACAACCAAGTGTATCTTGAAAAATGATCGACAAACACAGCATAAAACCTGAACCCTTGAGTCGACGCAACGGGAGAAGGACCCCATAGGTCACAATGTACTCGTTCTAATGGTTTGGTTGCTACAAACGCTGAAGTAGAAAAAGGTAAACGACTAGATTTTCCAAGCTGACACGCCTCACAGAACGAAGAGCTGGATTTATTCAAGACGATGGCTTTATTCTGAGATAGACGCTGGAGAACTTTATGATGAGGATGACCGAGCCTCAAGTGCCAAACATCATCAGGTGCGGCTTGCTGTCTGTGAGAAAAGAAAGCCATGAACTGCAGGTTCTCCAAGACGTATAGATTCTTCTGCCTAGTACCTCTGGTGAGAGGTTGCCTTGTCTGTTTGTCCTTCACAACAACACTATCAGCATCAAACTCAATAGTACAGGGATAATCAGAAGTGAGTTTCGAGACAGATAACAGAGATTTCGTTATAGACGGACAAACAAGAACATCATTGAGCTTTATGTTACCTTGAAGACTAGGCAACACTGCAGTACCAACATGTGAGATAGGGAGATAATCACCATTACCAACAAGGACAGTGTCATCACCTCTGTAGGTCTGAGCCGACTGCAAGTGAGCGCTATCATTAGTGATGTGAGCTGTAGCACCAGAGTCAGCACACCACTCGTGACCAGGCACCGCGGAAAGCTCTTGACCTCTGTAAGCAGCTAAAGCGTTGTGATACTCTTCTGCTTGAAACGAGTGGTCAAAACGCTTGTAACACTTGTAGGCTGGATGACCAAACTTGTTGCAGATCTGACATGTTGGTCTGTTCTCTGAAGAAGAAGAACCACGGCCCGAACCTTGACTGATTTGTTGATGAAAGCCTCTGCCTTGAGTCGAGTAACCACCACGACCACGAGAGGATCCTCTACTCGAGCCGCGACCCCTGTTTGAGTAGCTCCCTCTGTTACCGTAAAAGGCTTGATTCGTAGCGACGTCAGAAGAAGTCTCGTAAGCAGCAAGCTTGTCGTGGAAACCGATAAGTTTGAAGACAACATCGTCGAAGTTCGGACCAGGGAACACATCCATGGAGCTCTCTATCACAGTCGTGATAGACTCATATTCACGACCCAGTCCACGAAGAACACCATAGATCTTCTCGTGCTCAGACAGAGGAGCTCCGATTGAGTCGAGTTGGTCGCAAATCAACTTCATTTCGGAGATGTATTCCGATAGAGATTTACCGCCCTTCTGAGTAGACTGAAGACGACTCTGAAGCTCGAGCTTGCGAGTAGGAGAGACACGGTTGTACTTCTGACCAAGATACACCCACAACTCCTGCGACGAGCGAAGACCATAGACACATTTGATGACGTCTTCAGAGAGAGATCCAACGAGCCACGCCATGATACGTTGATCGGTGCGAATCCATTTAGCGTAGGCAGGGTTCGGAGTCTCGACATCTTCTTCACCGGTACGGACAGTAAGGGTCAGAGAGGGCCGGGGTTCAGAGCCATTGACGTAGCCGAGAAGAGATTGGCTGTTTAAGAACTGTTCGAACTGAAACTTCCAAGAGAGGTAATTTTTGTCATTTAGCTTGAGAGTAACGCAGTGGGCGATGGTTAAAGGAGAAGTAAACGGATCACCATCCATGGTTCTGATACCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

223

Start:

4412683  

End:

4412905

Strand:

-

>A01_LTR-Copia_51

TGAAGAAGATAACGTTTTATTCAAGGTTTCTTGCTTGATTACAATGGTTACATAACATCTGAATATATAGTAAAGCTGAGAGACCAACTAGGGCACAGCTCAGCATGTGACAGCACATAGTTTTAAGGAATCAAATCTGTTACACAGCTGTGTGACGTGAGCTGGAGCAGCCGTACGGAGACCGTAGTTTGGCGTCATCTGCTTTGGTCCTCTGTTACCGTTG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

201

Start:

4634340  

End:

4634540

Strand:

+

>A01_LTR-Copia_52

TGGATAAGCTTCAATAAAAATAGCTTAGGATACAAGTTATTCATTAAGGAAAGTAGAATAACTTATAGATTAGGATAAAGATAAGATTCCTAGTCTCAATTGTATTAGGACAAGTTAAGAGCTCCTATATAAAGAGATCTATAATGTAAGTTGATCTCATAAGTTAAGAAAGAAATAAAACGAAGGTACTGTTTTATTAAG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4137

Start:

4634575  

End:

4638711

Strand:

+

>A01_LTR-Copia_53

CTAGATTTGGTATCAGAGCTCCAGGTTATTGTGAGTGCAATGGCTGATACGAAAGCATTGACAGATATGAAAGCACTAGGAAGAAGAGAAGACGTTCCGCGTGCAGTAGTCTGTCCGATGCTCAACTCGTCCAACTATACCGTTTGGGCGAAGAGGATGAAAGTCCTACTAAAAGTTCATAAGGCTTGGGAGACAATCGATCCTGGTACAGATGAAGAAGAGAAGAATGATATCGCAACTGCACTTCTGTTTCAGTCAATACCTGAAAGCTTGATCTTACAGGTAGGAGATGATGACTCCCCTAAAGTTATTTGGGAAGCCATTAAAACCAGAAACCTTGGTGCCGAACGCGTGAAAGAAGCTCGTCTACAAACCTTAATGAATGAGTTCGACCGTCTAAGAATGAATGACTCGGACACCATTGATACTTTCTCTGGAAAGATATCTGAGCTTGCATCAAAAGCAGCCTCGTTAGGTCAAAACATCGATGAACCTAAAGTCGTGAAGAAATTTCTGAATAGCTTACCTCGGAAATTTATTCACATGACTGCATCTTTGGAGCAGTTGCTAGACTTAAATAAAACTCCTTTTGAAGATATTATTGGGAGACTTAAAGCTTATGAAGAACGCATTAAAGATGAAACATCGTATGATCAACAAAGCAACCTTCTATTCTCAAGTTCAGAGAGCTCGTCTGATCAGAACTCGAGAGGACAAGGGAGAGGATCAAATCGCGGTCGTGGTCGAGGAAACAGAGGAAGAGGACGCGGGAAAAGCAGTTCCGGTGAGTGGAACAAAGAAAAGAGGGACTACTCGCAAATCACCTGCTTTAACTGCAAGAAGAAAGGCCACTTTAAATCAGTTTGCCCTGAGAAGAAAGAAGAAAATCAAGAACTCAACAAGACCGAAACAGAGAATGCAGATGTTGCGCTCTATCTACATGAAATAGTTTTCCTTAATGAAGAAAAGGTGCTACCAAAAACACTTGAACCGAGCAAGAGAGAAGAAGGAATGTGGTACTTAGACAATGGCGCAAGTAATCACATGACTGGTGAGAAATCTTTCTTTTCAGAACTCAATGAAAACATTAAAGGAAGGGTAAAGTTTGGAGATGGTTCATGTGTGGAGATAAATGGCAAAGGATCAATCCTCTTTGAAGCAAGAACAAGGGAACAAAAGCTACTGACTGATATATATTACATACCTGAGTTGAAAAGTAATATAATCAGTTTGGGTCAAGCAACGGAACAAGGCTGCGACGTTAGAATGAAGGATAACTATCTAACGGTGCGAGATCCAAGTGGGAAATTATTGACAAAAGTACTAAGGGCTTCTAACAGACTCTATAAAGTCTTTCTCAAGGTTGGAAGCCCTATCTGTCTACTCACAAAGATCAAAGAGGAACCGTGGAGATGGCACGCCAGACTCGGACACATCAACTTCAAAACCATAAGGAACATGTCGGCTCAACAGATGGTAGAAGGATTGCCCGAGATTACAGAAGTAAAGCAAATTTGTAACTCTTGCTTGGTTGGCAAGCAAACAAGAAAATAGTTTCCCTCTACAACGTCTTTCAGAGCGACTCGTGCACTAGAGTTGTTACACGCAGATCTCTGTGGCCCAATTTCTCCTGCAACGCCATCACATAACAGATATACCTTTGTTATAATTGATGATCACACAAGGTACATGTGGTCTATCTTGTTAAGAGAGAAGAGTGATGCTTTTGAGAGATTTAAGATGTTTAAGAACCTTGTGGAGAAGGATGTCGATAAGAAAATATTAACGCTTCGTACAGACAGAGGAGGTGAGTTCACTTCTAAGGAGTTTCAGGATTACTGCAATAAAGAAGGCATCAAGCGTCAGCTAACAGCTCCTTACACACCGCAGCAAAACGGTGTGGTTGAAAGGAGAAACCGTACGCTAATGGAGATGACAAGGAGCATGTTAAAAGCAATGAATGTTCCAAACTACATGTGGGGTGAATCCGTTCGTCACACAACTTATCTTATCAACCGTGTGCCTACTAGGGCTTTAAAGAATCAAACGCCATATGAAAGCTTGAAGGGAAGAAAGCCTAGTATAGGCCACATAAGGGTTTTTGGATGCGTTGCACACGCAAAAGTGGACTCTGTTCACTTAAAGAAGTTAGACGATCGATCACATACCCTTGTTCATCTTGGCATCGAGCCTGGCTAGAAAGCCTATCGACTCTATAATCCCAACACTAAAAGGATTATAGTAAGCCGAGACGTAATCTTTGACGAGAAACAAGCTTGGGGTTGGAAGGGAGCTGATGAAGAAGACAAACGTCCTGGTGGCTTTCACATGACGTGGGGATCAATACTCGATGAAGGGAGTGGTCCGTTTGTGTTAGGCTCACATCAAGAAGAAGAAGTTGCCGCAGACAGCGATCAACAAGATGATCCAGAGCCAACACAAGAAGAAGAAACTAATGATCAGAACTCAACTCAAGCAACAAGACGTTCAACACGTCAGACAAACAAACCAAGCTACCTTGAAGATTACATTCTATTTGCAGAGTTAGAATGTGAGATGTTGCTACTCTCTATCAACGATGAACCTATCAATTTTCAAGAAGCCAAAGCTGACAAGAGGTGGACAAACGCCTGTGAAGATGAAATCGATTCTATCTACAAGAATAATACATGGAAACTAATAGACAAGCCAGCCGGTGTAAAGATCATTGGTCTCAAGTGGGTTTTCAAACTTAAGAGAAACGCAGACGGATCAATCAACAAATTCAAGGCTCGACTTGTAGCAAAAGGATATGTACAAGAGCATGGAATTGATTTCGATGAAGTTTTTGCTCCAGTGGCTCGACTAGAGACTATAAGGTTTCTAATTGGTTTGGCTGCAGCAAATAAATGGGAAATCCATCACCTAGACGTCAAGACAGCTTTCTTGCACGGAGAGTTAAATGAAGATGTCTATGTATCACAGCCTGAAGGGTTTGAAAAGAAGGGAGAAGAGCATAAAGTTTTCAAACTCTCAAAGGCTTTATATGGTTTAAAGCAAGCTCCGCGTGCTTGGAATACAAAGCTCGACCAGATTCTAAAGAAGCTGAAGTTCAAGAAGTGCACAAAAGAGAGTTCAGTGTATCGAAAGGAAGATGGAGATAGACTACTTATTGTAGCTATATATGTGGATGATCTATTTGTTACCGGGAACTCTATCAAGGCAATTAAGGACTTCAAAGTGGCAATGTCTCAACAGTTTGAGATGTCCGACTTGGGTATATTAACATATTACCTAGGTATGGAAGTAAAACAGAGTTCACAAGGCATCACAATCAAGCAAGAAGCATATGCACTACGGATACTAAAGGAAGCTGGCATGGACGATTGCAATTCAACTCATATACCGATGGAGTTTGGTCTACAACTTTCCAAGGCACTAGATGAACCAGAGATCGATGCAACCTTATACAGAAGAAGGATAGGATGCTTGAGATATCTAATGCATTCCAGACCAGACTTGGCATTCGCTATTGGAATTCTCAGCAAGTATATGCATTCACCGCTCAAGGCTCATGGTGACGCATTAAAACAAGTACTGAGGTATCTGAAAGGAACTCACGGGTATGGACTGGTGTTTAAGTGTAGTGGATCTCAGAAACTCATTGGATACAGCGACAGTAGCCATAACACAGATCCAGACGATGGTAGAAGCACGACAGGACACTTGTTCTGTTTCGGAGATACACCTATAACTTGGTGTTCAGAAACAAGACACAGTGGCTCTATCCTCTTGTGAAGCTGAATTCATGGCGGCAACAGAAGCTGCAAAGCAAGCCATATGGCTTCAAGATCTTTTGAGCGAGATCACCGGAAGAAAGACTGAGAAGACATTGATCCGTGTAGACAATAAATCAGCCATAGCATTAGCCAAGAACCCAGTGTTTCATCGTCGAAGCAAGCACATTCAGAAACGTTTTCACTTTATCAGAGAGTGTGTAGAGAGAGATCTTATTGACGTGGAGCATGTACCCGGAACAGAGCAGAAAGCGGACATCTTAACTAAAGCATTAGCAAAGATCAAGTTCAAGGAGATGAGGGAGAAGATACAAGTTCAAGACCTAAGTGAAAATGCTTTGAAGCTTAGAAGGGAGAATGT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

201

Start:

4638714  

End:

4638914

Strand:

+

>A01_LTR-Copia_54

TGGATAAGCTTCAATAAAGATAGCTTATGATACAAGTTATTCATTAAGGAAAGTAGAATAACTTATAGATTAGGATAAAGATAAGATTCCTAGTCTCAATTGTATTAGGACAAGTTAAGAGCTCCTATATAAAGAGATCTATAATGTAAGTTGATCTCATAAGTTAAGAAAGAAATAAAACGAAGGTACTGTTTTATTAAG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4167

Start:

4653878  

End:

4658044

Strand:

+

>A01_LTR-Copia_55

TGGTATCAGAGCATAGCTCTTTTTGATCCTTCTCCTCTGTTCGAATTTCTTTTTCCTTTCTCACGTTTGTTATCTCACCACTGTCTCGTCTGCAATGGCACAAGTTGCGCAAGTTGAGCGAGCTTTTGGAGTAACAAACATAAAAACGCACATTCCTATTGTGCTAGATTTAGACGTTTTCAATTACGACGCTTGGAGGGAATTGTTCCAAACCCACTGCCTCACGTTCGACCTATTGGGGCATATTGACGGTTCCTCTACTCCTACCGGAGACGATGATACCCCATGGCTGAAGCGCGATGGACTGGTGAAACTTTGGATCTACGGAACGTTGGCCCCGCCGCTTTTCAAATCATCCTTCAAAACAGGAGGAACAGCCAGGGACATTTGGCTTCGGATTGAAAACCAGTTCCGCAACAACAAAGAATCTCGGGCGATTCAGCTTGATAATGATCTTCGCACCAAGGAGATTGGAGATCAGACGATTCAGAAATACTCTCAGGAACTGAAATCCATCGCTGATCTCTTGGAGAATGTCGACGCTCCAGTCAGTGACAAGACGCTAGTAATGTATTTACTAAATGGTCTCAATGAGAAGTTTGACCATATCATAAACGTCATCAAACATCAGAAACCTTTCCCAAGTTTCGAGGAGGCTCGCAATATGCTGGAGCTAGAGGAGACTCGACTGAAAAAGACTACCAAGACGTCAGCTAGCCACACTGACACTTCGTCGTCTTCAACGGTTCTGATCACAACACACCGTGATGCTAAAACTGACACTCAACCACGCAATCAGGGAAGAAACAACAGAGGTAACAGACGCGGTAACAGAGGTCGAGGCAGGAACAACTACGGCTACAACAGACCTCAGTACATGTCTTGGAATGGTCCGCAACAATACTGGAATGGAGCCTACAACAATTGGCAGCAATACCCTACTCCACCATGGATGGCTTACCCCTCTGCACCTGCTTCTCACGGCATGTTCCAGACGCGACCATCAACACCTCAACAACAAGAAGCTCACATGGTTCAGCCGACCCGAGACTTTCAGGATATGTTCAGTACCATGAGCTTGGCGGAACCTACATCAAACTGGTATATGGACTCGGGTGCCTCATCTCACATCTCATCATCACCAGGTAACCTCCAGTCTGTTGTTAACTTGCGCACCGGAAACTCAATCGTTGTTGGTAATGGATCTAAAATTCCTATACACTGTTCCGGAAACACTTCTGTTCCTACTAAGTCCAGACCTTTACACCTCCAAAATGTTCTGGTCGCACCTGAAATTGTTAAAAATCTTATATCTGTCCGTCGTTTTACAAAAGATAACTGGTGCTCTGTCGAATTTGATCCATTTGGTTTTTCTGTGAAGGACCTTCAGACACGGAAAACCATTCTCCGCAGTAACAGCTCAGGCGATCTTTACTCCCTTCCATCGCCTCTCCATCAAGCTCACACTGCTCTTGTTGCTGTTTCGCCTACTTTATGGCATAAGCGTCTTTCACACGCAAATAATGAGGCTATACGCTCTCTTGTTTCTTCTTGTTCTATCAATTGTAATAAGGAAAGCTTGCAATTTTGCAATGCTTGCCAATTGGGTAAACATCTCAAACTCTCATTTTCGAAATCTCTTAATAAAAGCTCTCAGCCGTTTGAACTGATTCACTCTGACCTCTGGACTTCACCCATTCCTAGTCTTAGTGGTATTCGTTATTATGTGCTGTTTCTAGATGATTTCTCACATTATCTTTGGGTTTACCCTATGCGACAGAAGAGTGAAACGTTCTCTAAATTCTTACACTTCTCTTCTTATGTTCAGAAACAACATGGAAAAACAATTAAATCACTTCAATGTGATAATGGAGGGGAGTACAACAATTCTCAATTTCAAAAACATTTTTCTGAAAATGGGATTGTTTTTCGGTTCTCTTGTCCTCATACCTCGCAACAAAACGGTAAAGCCGAGAGGATGATAAGAACCATCAATAACTCTATTCGTTGCCTTCTTTTTCAGGCCCAGATGTCACCAGCATATTGGGTTGAAGCTCTTCATGTTGCAGCCCACAACACAAATATCCTTCCTTCTTCTGCAACAGAACGTAAAACACCTTACTCCATTCTGTTTGGTCATCCCCCGACATACGACAGTTTGCGTGTGTTCGGTTGCCTATGTTTTCCAAACCTAAACCACTCAAATCTTCACAAACTCTCTCCTAGATCGACACCTTGTCTGTTTCTAGGATATCCATCAAATCACAGAGGCTATCGGTGTCTTGATCTCAGGACAAACCGAATCATAATCTCTCGTCATGTCATCTTTGACGAGACGACCTTTCCGGCTGCTCAGAAACAATCCTCTCCATCCAATTCGTACAACTTCCTGGATGGTTCTGACTATACTTCACCGATGTTTCAATCAATCCTGCAGTCACAAACTATTCCTGTTGCTGGTACAAATTCCCCAGTAGCGCCCACTGCCTCTGAAACACAACCTCTTGCTCCTGTTGCATTACCAACAGCTCCTGCTCCTGTCCAGCGAATGACTACTCGAGGTCAGTCTGGCATCGTTAAACCTAAAAAGATTTTTAGCCTTTACAGCTCTTCAGTTTCTCGAATTCCTACAACTCATCAAAAAGCTTTGTTAGATCCAAATTGGAAACCATCAATGTTTGAAGAGTACGATGCTCAAATTAAAAATAAGACATGGAGGCTGGTTCCAAGGCCTAAAGGTGCTAACATTATTAATTCAATGTGGTTGTACAAGCACAAGTTTGATGCAGATGGAACTCCAACTCGTCACAAATCGCGGCTGGTGGCTAATGGCAAGACACAGGAGGAGGGCGTCGACTATGCTGAGACTTTCAGCCCTGTTGTCAAGCCGGCGACAATAAGGTCTGTTCTGGATATCGCTTTAAATCATGGATGGTCGATAAGGCAACTGGACGTAAAGAACGCCTTCCTCCATGGTACAATCGAAGAAGATATCTACATGCATCAGCCTCCAGGCTTTGTTGATAAGACAAAACCCCACTATGTATGCAAGCTGGAGAAAGCATTATATGGCCTCAAGCAGGCTCCAAGAGCCTGGAATGCCAGAATGAGTCAATACCTACATCGACTTGGTTTTCTAACATCAAAATCCGATGCCTCTCTTTTCGTTTACAAAAATAAAAGGGATCTTGCATACTTACTTTTATATGTAGACGACATAATCTTAACAGGTTCCAGCCCCGCTTTGATCCAGCGGATCACAGACAGTCTCAAAACAGAGTTTCCAATGTCAGATATGGGGACATTAAGCTACTTTCTCGGTATCAAAGTCGATCACAACAAAGCCGGTCTTTTCTTGTCTCAGCGTCAATATGCAACGGACATCATTGAGAGAGCAGGCATGTCCGATTGCAAACCAATCTCAACTCCAGCAGACGTCAATGCAAAGTTATCAGCTGAAGGTGGGGAACGTGTAAGCAATCCAACAGCATACAGAAGCCTAGCAGGAGCACTTCAATATCTGACCTTCACACGGCCAGACATTACCTATGCAGTTCAACAAGTATGTCTCTTCATGCATGATCCACGCCAAGCACATCTCACTGCTCTGAAACGGATTATCAGATATGTGCAAGGGACAAAGGACCATGGCTTGCAGATGTACCGATCGCAAAACTCTTCATTGACAGCTTACTCCGATGCTGACTGGGCCGGATGTCCAGACACTCGCCGCTCCACTTCAGGCTACTGTGTTTACCGAGGTAACAACTTGATATCGTGGTCATCGAAACGTCAAGACACAGTATCACGATCAAGTGCCGAGGCCGAATACAGAGGTGTCGCAAACACAGTCGCAGAAACATGCTGGATCAGAAACTTGCTTCTTGAGCTTCATCAACCGGTTTCCAAGGCAACTCTGATCTTCTGCGACAACATCAGTTCAGTATATCTGTCCGCCAACCCTGTAAAGCATCAGCGGACCAAGCATGTGGAACTCGATATTCATTTTGTCAGAGAAAAAGTGGCTCTCGGACAAGTAAAGGTACTGCACGTTCCGTCCTCTTCGCAGTACGCGGATATCTTCACCAAAGGACTCCCTTCATCACTGTTCTTGGAGTTTCGCTCCAGTCTAACCGTCCGTTCACCTACCGATTCGACTGAGGGAGG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

263

Start:

4665083  

End:

4665345

Strand:

+

>A01_LTR-Copia_56

TGTTGGGATAAGCTTGAGTTAGCTTGGAGATCAAGCTAAATATATAAATAGGAAAGTCCTTGATAATTAGGAGTTATCTAGTTATCCTATGTCTTGTGTTGTTAGGACTTTATATTTATATATATATGGAGATGTCAAAGTGTGAGATAACATATGAGTTGTGTGATTGAGAGAGCTTAAGTTTTGAGGAGTTTCTTAAGCCTTAATAAGAGAGTATTCTTATTGAATTTGTGATCCTTGATTCATACGTTTGTGATTCTACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4169

Start:

4665346  

End:

4669514

Strand:

+

>A01_LTR-Copia_57

CTTGGTATCAGAGCATTCTAGGCGAGATACATAAACGTGTGTGACTGATTTATTTCTGCAAACATGAGTGACGTAAAAGATGAAGACGAAGCAATCTCTAAAGGAACCGGACCATCCACCATAAAGTTTCCCATGTTAAATTCATCAAACTACACTGTATGGGCTATGCGGATGAAGATTGCCCTCAAGGTTAACAAAGTATGGGAAGTCATTGACCCAGGAACCAAACACGAAGAGAAGAACAACTTGGCAATAGCCTTGCTGTTCCAATCAATCCCCGAAGCCTTGACATTACAAGTTGGTGACCTTGATACAGGAAAAGCAGTATGGGAAGCCATTAAAGCGAGGCATGTTGGAGCTGAACGTGTGAGAGAAGCAAGACTGCAAACATTAATGGCGGAGTTTGATAGACTAAAGATGAAGGACACTGACACGATTGATACTTTTGTTGGAAAACTATCCGAAATCTCTTCAAAGTCTGCATCGTTGGGAGAAATATTAGAAGAACCAAAGCTTGTAAAGAAGTTCTTGAAGAGCTTACCAAGAAAAAAATATATTCACATTGTAGCATCTCTTGAGCAGGTTCTTGATCTGAATACTACTAGCTTCGAAGATATCGTCGGGAGATTGAAAGCTTACGAAGAGAGGATATGTGAAGATGAGGAAGAACAAACTGACGATCAAGAAAAACTAATGTATGTTAACTCCACGACAGAATCTCACCAAGAGAATTATGGCGGAACCAGAGGAAGAGGTCGCGGAGGACGAAACGGATGGAGAGGAAGAGGCCGCAGACGCTACGGCAACTTCCATACGCAGAGAGAAGCGTACAGACAAGGTCAAAACAGAGACACATCGCATATAACTTGTTTTAGATGCGATAAGACTGGACATTATGCACAAGACTGTCCCGACAGATTACTGAAACTTCAAGAGACCACAGAGAAGAAAGATGAAGAAACTCACGAAGCTGACGAGTTGATGATGCATGAAGTGGTTTATCTTAACGAACAGAAGGTAAATCCAATGATTTTCGAGAGCGAACAAGACACAAAGAACGTATGGTATCTTGATAACGGAGCGAGTAATCATATGAGTGGAGATCGTATGTTCTTCGTGACTCTTGATGAGAATGTAACAGGAAAAGTTCGCTTTGGTGATGATTCACGCATCGACATAAAAGGAAAAGGATCTGTTCGTTTTATATTTGATGGAGGCGAGAAGAAGATTTTAAAAGATGTCTACTACACACCGGGTTTAAGGAGCAACATTGTCAGTTTAGGACAAGCAACGGAAGCTGGATGCGAGGTAAGAATGAAAGACAACGAACTCCTTCTCTTTGACAGACAGGGTTACCTAATGGTCAAAACAACACGCTCAAGGAATCGTCTGTATAAGGTTGCTCTACAAGCTGATACAGTTCAACTTCTTCAAGTCTCCACAAGCTCGGAGTCTTCTAAGTGGCATGCTCGTCTTGGCCATGTTAACATGGATACAATGAAACTGATGATCAATAAAGAACTGGTCGAAGGAATTCCTCATATCGAGGTAAAGAAAGAAACCTGTGTAGGCTGCTTGCTTGGCAAGCAAGCTCGTGTACCCTTCCCAAAAACAACTCTGTTCCGAGCCACTCAACCGCTGGAATTAGTTCATGGAGACCTATGCGGACCGATTACACCCATCACACCTGGACAGAAACGTTATGTTTTTGTCCTAATAGACGACTACTCTCGATATATGTGGATAATCTTGTTAAAGGAGAAGAGTGAAGCTTTCGAAAAGTTTAAACACTTCAAGAAGATAGCAGAACTTGAAACCAGAGCTGTAATAAAAACGTTCAGGACAGATAGAGGTGGAGAATTCGTGTCTCACGAATTCAATCTATACTGCGATAAGAATGGAATCTCGAGACACCTAACAGCTCCATACTCTCCTCAACAAAACGGAGTTGTTGAGCGACGTAATCGAACCTTGCTCGAGATGACGAGAAGCATACTTAAACATATGAATGTTCCAAGTTGGCTATGGGGGGAAGCAACAAGACACGCCACTTATTTGATAAACCGTATTGCCACAAGATCACTAACCGGTGAAACTCCATATGAAGCTCTACGAAAGAAGAAACCAAACTTGAAGCATCTGAAGGTATTTGGCTGTGTATGTTACGCTAGAACAGAGGTTGCAGGGAGGAAGAAGCTCGACGATCGATCCAGATTTCTTGTACACTTGGGTACAGAACCCGGATCTAAAGCTTACCGCTTAATTGATCCCGTGAGTAAAAGGATTGTGGTGAGCCGAGATGTTGTATTTGATGAAAGTAAAGCTTGGATATGGAACGTGAGTGACCAGATAAGAGAACCTAACTCGTTCTCTATTGACGTTCGAGGTTTTGACGACAATGACAAAACAAAACCTGGAGCTACTATCGATGAACCTGAAAACGAAACAGAGTATGAAGCAGAGGATGATGGAGACAACAACGATGAAGAAGACGATGGAGAACATACACAACTAAGGAGATCATCGAGGATAAGCTCAAAACCGGCATACCTTGACGATTACGTTCTTCTTGCAGAAGCTGAAGGAGAGAGACTATTGATGGTTCTAAACGAAGAACCTTGGGACTACAATGAAGCTAAGGAACTTAAGGTTTGGGTTGATGCGTGCAAGGATGAAATCTTTTCAATAGAAAAGAATAAAACTTGGAGTCTCGTTGATCTTCCATTGGGAGTAAAGCCTATCGGCCTGAAGTGGATCTTTAAAGTAAAAAGGAATGCGGATGGAAGCATTAGTAAATTCAAAGCACGATTGGTCGCAAAAGGCTATGTTCAAAGACACGGAGTTGATTATGACGAAGTCTTTGCGCCGGTCGCTCGTATTGAAACCATCCGGTTGGTTATTGCTATAGCAGCATCAAATGGATGGGAGATCCACCATCTTGACGCCAAGACAGCTTTCCTTCATGGCGAGCTAAAGGAGGACGTGTACGTTACCCAACCTGAAGGTTTCATAGTCGAAGGAAAAGAAAATAAAGTGTACAAACTGAAGAAGGCGTTGTACGGGTTGAGACAAGCACCTAGGGCTTGGAATGTGAAGCTGAATGGGATACTCCGGGAACTTGGCTTTACTAGGTGTCCTAAGGAACCTTCACTGGATCGAAAAGACGAAAGGAAAGGCATTCTCATTATCGTGGTCTATGTGGACGACCTTCTTGTTACAGGTTCCTCGGTTTAAGCAATCCTAGAGTTCAAGAAAGAAATGTCAAGAAAGTTTGAGATAAGTGATCTAGGGAAGCTAACCTATTACTTGGGTACTGAAGTACTACAAACAGAGGAAGGTATCGTGTTGCGGCAAGATAGATATGCGATTAAAATCCTGGAGGAAGCTGGAATGAATGAATGTAACTTAACTCATGTTCATATGGATGTCAACGTGAAACTTTCAAGATCAGCACAAGAAAGGAGCATCAACGAGCGTGATTATAGAAGAAGCATAGGCTGTCTTCGCTACCTGCTCCATACTCGACCTGATCTCTCATATAGTGTTGGCGTGCTAAGTCGTTACATGCAGGAACCGAAGGAGTCTCATGGAGCAGCATTGAAGCAAATTCTTAGATATCTACGAGGAACAACTTCACTAGGTCTTCGCTACTCAAGATCAAGGAAGCAAGAGATAAGAGGCTATAGTGATAGCTCACATAATGTAGATATAGATGATGGAAGGAGCACGCATGGTCATGTGTTCTATCTTGATGAAAGCCCTATCACTTGGTGCTCACAGAAACAAGAGATTGTTGCGCTCTCATCATGCGAAGCTGAGTTCATGGCAGCAACTGAGGCAGCCAAGCAAGCCGTGTGGCTTCAGGAGTTACTTAGCGAGGTTGTTGGACGAGATATTGTCAAGGTCGCCATTCGGGTTGATAACAAATCAGCCATCGCCTTGACCAAAAACCCTGTCTTCCACGGACGAAGTAAGCACATTCATAGGCGTTTCCACTTCATAAGAGAATGTGTAGAGAGTGAGCAGATTGAAGTTGAGCACATCCCGGGAACTGAGCAAAAGGCCGACATATTGACAAAGTCACTTGGAAGGCTAAAGTTTAAAGAGATGAGAAGTTTGATTGGAGTTCAAAATGTTGGAGAAAATGAATTCAAGCTTAAAGGGGAGAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

263

Start:

4669515  

End:

4669777

Strand:

+

>A01_LTR-Copia_58

TGTTGGGATAAGCTTGAGTTAGCTTGGAGATCAAGCTAAATATATAAATAGGAAAGTCCTTGATAATTAGGAGTTATCTAGTTATCCTATGTCTTGTGTTGTTAGGACTTTATATTTATATATATATGGAGATGTTAAAGTGTGACATAACATATGAGTTGTGTGATTGAGAGAGCTTAAGTTTTGAGGAGTTTCTTAAGCCTTAATAAGAGAGTATTCTTATTGAATTTGTGATCCTTGATTCATACGTTTGTGATTCTACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

149

Start:

4769699  

End:

4769847

Strand:

+

>A01_LTR-Copia_59

TGGGATTAGGATAAATATAAAGTTTCCTATATTGTTGGGATTTAGACGATTTATGTATTTCCTTTTCCTAGCTAGGTTATGCTAAAGATGTTGTATATAAACACCTCTTGGTGAATGAATAAAGGACACACAATTCTACATTATATTCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4551

Start:

4769848  

End:

4774398

Strand:

+

>A01_LTR-Copia_60

TTATATGGTATCAGAGCTAAGATCTTACCAAAATTTCTTCTAAATCAAACTCATCAACGTTTGATCTAATTCTTCTTCTACTTCTAAATTCATCGTTCTAGATGTCTATTACTACTACTCCTACTTCCGCAACTACAGGCGTTCCTCCGGAGCTATCTCCTTATCACCTCCATCCATCCTATAACCCCGGGGTTCTTATCACATCTGTTCTTCTCACTCATGAAAATTACCAGGAGTGGTCGACAGAGCTTCGGAATTCTTTACAAGCTAAGCAGAAACTTGGCTTTATTGATGGAACAATATCAAAACCATCGGAGGATAGTCCTGATTTAGCACGGTGGCTGGCAGCAAATTCAATGATCGTCGGATGGATTCGTACGTCGATTGATTCAAAAGTTCGTTCGACGGTGGCACACGTACCGGATGCTCATAAACTATGGGAATCTTTGAGACTGCGTTTCTCTGTCAAGAATGGGACTAGAGTTCATCAACTCCAGGATGCTATTACTAACTGCAAGCAGGATGGACAATCAGTTCTGGAATACTACGGCAGGCTCACGAAACTATGGGAGGAACTCCAGAATCTCAAAACCATACGTACGTGTACCTGTGCTGCGGCTGCTGATATTGAAAAAGACAAAGAAGATGCTCGAGTTCACAAGTTCCTCTTCGGGCTAGATGACTCACGCTTTATGTCTATTAGGTCACGGATCACAGACGAGGATCCTTTACCTGATCTTAACCTAGTCTACTCCAGAGTAGTTCGTGAGGAGCAGAACATGATCACAACTCGATCTACAGAACAACGAACCGATGCTTTAGGCTTCTCTGCTAAAAACGAGACCTCAAAGGATCTGTCGTTGTCGGTCAATAACTCTACACCTTCGCGCTCTAGGGATCCAGCTCGTACGTGCACACATTGTGGCAGGCCAGGGCATGATATTTCTGAGTGCTTTCTAGTACATGGGTTTCCCGAATGGTATCTTGAGAGACAAAACAACTCTACCTCGGGTACTCGTGGTGGACGTGGAGGACGTTCCAACTCAAACAGAGGCCGTGGCGGACGCGGTCGAGCAAATGCAACTCATGCATCAACTTCTATCAATGCTGATCAGATTGCTTCTTTGATCACGCTTCTACAAAACCAGCAGAGCAACCTCTCGTCCGAACGTTTGTCTGGTAAAACTACACTCACTGACGTTATTATTGACACAGGTGCATCGCACCACATGACCGGCGATCTCGCCCTACTACATGACGTACATGACATAGCTACTTCATCAGTTCTATGCCCTAATGGTCGTAACTCTCCGGCCACTAAACAGGGAACTTTGCGACTTAGCAAAGATTACATGTTGCATGATGTCCTATACGTGCCCGACTTTCATTGCACTCTCATCAGTGTTTCCAAATTATTAAAGCAAACGGGGTGTATCGCGATATTTACTGATACATTATGTGTTTTACAGGACCGTTTTTCGAGGACTCTGATTGGAGCAGGTGAAGAACGTGAGGGGGTGTACTACTTTACGGGAGTCAAAGTTGCACGAGTTCATGGGGCTACAAAGTCTTCAGATTCTTCAGTTCTGTGGCATCGTCGTCTTGGGCATCCGTCATACAAAATTCTATCTTCATTACCGGCTTTTAAATCCCTTATTATAGATTTTTCTGATTCTAGTCAATGCGATATTTGTTTTCAAGCTAAGCAAACTCGACGGGTTTTTCCCGATAGCCTTAATAAAGCTTCTGCACCTTTTGAACTTATTCATTGTGATGTTTGGGGACCATATCGCACACCAGCATCATGTGGTGCCGTATACTTTCTTACCATCGTTGATGATTTCTCTCGCGCAGTATGGACGTATTTGATGCTTGAAAAATCAGAAGTTGCTACTTTACTTAAGAACTTTTGTGCCATGTCGGAAAGGCAATTCGGACGTCCCGTTCGAATGATTCGCACGGATAATGGAACAGAGTTTACAGTCCTTCGGAAATATTTTCAGGAGCAGGGGATTGTACATCAAACTTCTTGCATTGATACACCACAACAAAATGCTCGTGTGGAACGGAAACACAGGCATATACTTAATGTGGCTCGTGCTTGCCTCTTCCAAGCACACCTTCCTTCCACGTTTTGGGGAGAAAGTATTTTAGCAGCTGCTCATCTTATTAACCGTACTCCTACAAAAGTTTTAGATGGCAAAACGCCATATGAAGTGCTTCACGGTAAACCTCCAGTCTTTGATCAACTTCGCGTTTTTGGATGTCTTGCATATGCACATAGGCGTGCGCGAGATAAAGATAAATTTGGGGCTAGGAGTCGCAAGTGTTTGTTTGTTGGTTACCCCTTTGGCAAGAAAGCATGGAGACTCTATGATCCAGAAACAAATGAATTCTTCATAAGCCGCGATGTTCTTTTCTTCGAAGACAAGTTTCCAGGGCTTCCTGATACAGAGTATGTTACACCACCAGTTATGCAAGAGGACGTAATAGACGATTGGCTACTCCCGACGGTGACATCTAGGGGGAGCACGCCAGCATCGCCACCTATTCCCTCTCTTGTGCCAACAGACTCGTCCATTCCATCTACAACAACTCAAAATCCTACAAACGCTTCTCCTACTACTGAGACTCTACCTTCATCGACGTCTCCTACTTCTATACCTTCTGATCCACTGCCTTTGTCTCCAACTACATCTCCGACTCAGGCTGTGTTACCTACGACATCAACGTCAGAATCAGAACAGCCTGACCACACTAAATCTCCAGGTCTATTGGAAGTACTTGGTCGTGGTCATCGTGCTAAAAAGCCGTCCATTCTACTCAAAAATTTTGTTGCTCATACTACAGAATCTACAAACCCCTCTCACGTTCTATCTTCTTCTGATCAGAGTTCTCTTCCACCGGTCTCAGGTAAGACACTGTATCCTATCGCTGACTACTTGTCTTCCTCTGTTTTTTCAGAGAAACATCAGGCTTTTCTTGCTCAGATCACCTCGGATTATGTTCCTGCAACCTTTAATGAAGCTATCCTTGATGAACGCTTCAAAGGTGCTATGAAAACCGAGGTCACTGCCTTAGAAGACAATCATACTTGGGACGTCACTACTTTACCCCCGGGGAAGAAGGCCATTAGCTGCCAATGGCTTTATTCCAACAAATATCGAGCTGATGGTACAATAGAGCGACCCAAAGCTCGACTGGTGGCGCATGGAAATAGACAAAAGGAAGGTCGAGACTACAAAGATACATTTGCTCCTGTCGCAAAGATGAATACTGTTCGTTTTCTACTTAAGTTAGCAGCAGCAAAGCGTTGGGAGGTACATCAGATGGATGTTCACAATGCATTTTTACATGGGGACTTAGAGGAGGAAATCTACATGGAATTACCACCAGGCTTCCGATCTTCTGATCCATCCAAAGTCTGCAGGCTTCGCAAATCACTCTATGGTTTGAAACAATCTCCTAGGTGTTGGTTTTCAAAGCTCAGTACTACACTTCTTGCCTTTGGTTTTACTCAGAGTTATGAAGACTATTCTCTTTTCTCACTTATCCAAGGAAATATATGTCTTCACATACTCGTCTATGTCGATGACTTCATTATTGCAGGCAACGATATTTCTACGATTCAGCGGTTTAAAACCTACCTTAACAAGCACTTCAAGATGAAAGATTTGGGAAAAATCAAGTACTTCCTTGGTCTCGAAGTTGCTAGAGGACCTGAGGGTATTTTTGTGTCACAGAGAAAATATGCTTTAGACATTGTTGCAGAATGTGGTCTCCTCGGTGCTAAACCATCTCCTGTCCCTACGGAGCTTAATCACAAGCTTCCATTGTCTAAAAGCCCGTGGCTTACTGATCCCGGCAAATATAGACGCCTAGTTGGTCGTCTCATCTATTTGACGTTTACTCGGCCTGAGCTAAGTTATATTGTTCATCTCCTTTCTCAGTTTATGCAAAGGCCTCGCGAAGATCATTGGCTGGCGGCCTTGAGGGTTGTACGTTACTTGAAAGGGACTCCGGACCAGGGTATTATGCTATCCTCTTCGTGTGATTTGCAGCTTACTGCTTACTGCGATGCTGATTGGTCTGCCTGTCCTATTACACGCCGGTCATTGAGTGCCTATGTGGTTCTCCTCGGTGATTCTCTTGTCTCTTGGAAGACAAAGAAGCAGCGTACTGTCTCGCGTTCATCTGCTGAAGCAGAATACCGGTCTATGGCTGATACTACGTGTGAGCTAAAGTGGCTTAAACGCCTGTTGGCTCAATTTGGTTTCTCTCATCCTCAACCAATGCGTATGTTTTGTGACAGTCAATCGGCCATTTACATCGCCAAGAACCCTGTCTTCCATGAAAGGACAAAACACGTTGAGAATGACTGTCATACAGTACGTGATGCTGTTCAATCCAAGCTTCTCACGACAGAACATATCTCTACTAAGCATCAACCTGCGGATCTCCTCACCAAGGCATTACCTACGCCTACATTTGATTACTTATTGTCCAAGTTAGGCATTCGGACACCGTCATTGCCAACTTGAGGGGGAGTAT