Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_41Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
326Start:
4225681End:
4226006Strand:
->A01_LTR-Copia_41
GCTCTGATACCAAATATTGAAACTTAGTATCCGATTGTTCTCTGTGTATGCGAATGAAGATTAAGAATAACTCTCTTATATTAAGCTCTTAAGGCAAAACTCACTCAAAACCTTTTGTTCCTCAAACTCATACAATCACATCATAACTCGATGGATGTATATATATATAGCTAAACACAAATCCTAATCCTACTAGTAAAGATATGCTTATAGATAACTCCTAAAACATCTTTATCTTAATCCCCAACATTATCGGATTAGAACTTTGCTTAGCTTGGCCGGCAAGTCTTCACGCTTGATCCAATAACTTCATGCTTACTCCAACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_42Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
127Start:
4242272End:
4242398Strand:
+>A01_LTR-Copia_42
TGTATATATATGTAAATATAAATAGTAGAGGATCTCTATGTAATTAGTCTACTCCTAAACCCTACTCTCTATGTATATAAATACTCTACAAAGGCTCTAATAATATTATCACTTTCCATAATCTACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_43Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4356Start:
4242399End:
4246754Strand:
+>A01_LTR-Copia_43
TGGTATCAGAGCTTATGCTCCTAAACCTAGCAAAACTTTTCTAATCTCAAACTCAAGTCGTCATGAGTTCTTCCACCAACACCACCGAGGCAATCTCGCTCAACCCCAACACGCTGCTGCATATCAACATGTCAAACGTTTCTAAACTCACAAGCACCAACTACCTCATGTGGAGCTTGCAAGTTCATGCCCTCCTGGATGGTTATGCTCTCGCAAAGCACCTTGACAGTTCCCCTGTTGTCCCACCACCAACACTCACCACTGGAGATGATGTCACAGAGAACCCTGAGTTCGTATGCTGGAATCGCCAAGACAAACTCATTTACTCTGCTCTCCTTGGTGCCATAACTCAACCGATCCAGCCAACCGTGTCACGCACGACAACTGCGTCACAAATCTGGGAGAAGTTAGCTTCGATCTATGCCAAGCCAAGCCGTGGACATATCAAACAACTCAAAGATCAACTGAAGAACTACACTAAAGGTACTAAGTCCATTGACGAGTACCTTCAAGGCGCCGTCACCAAGTTTGATGAACTTGCACTCTTAGGCAAGCCTTATGATCATGAGGATCAAATTGAACTGCTACTTGGAGGCTTACCTGAGGAGTACAAGAATGTGGTTGATCAGATTGAAGGCAAAGACGTTGCTCCGAGTGTCACTGAGGTCCATGAACGCCTGTTGAACCATGAAGCAAAACTCCTTGCTGTTCGTGATACCACAGCATCGGTGATCCCTACATCGGCCAATGCGGTTCAACATCGACATAATTACTCCACCAACCGCAACAACAACAACAACAATAACAGGCGCTACAACAACAACTCCTACAACAGCGACACCACTCAGCAACGTTCGGATACACGCCCATTCAAACCTTACTTGGGTAAGTGTCAGTTCTGTAACACTCAGGGACACAGCGCCAGACGTTGTCCTCAGCTTCAGGGTCTCCAACCTGCTCTCAACCAACAAGCAACCAGTCCTTTCCGTCCTTGGCAGCCGCGTGCTAACCTCGCTATGAACTCGGGTTATCCAGCAGCGAACTGGCTCTTGGATTCTGGTGCTACCCACCATATCACCTCTGATCTCAACAACCTTGCTTTCCACAACCCGTATCAAGGAGGAGATGATGTCCTCATTGCTGATGGGTCAGGTCTACCCATAACCCATACTGGTTCATCTACTCTCTCAACCCCTACTCGCGATTTATCATTGAAAAACATTCTATGTGTTCCTCATGTTGATAAAAATCTCATCTCTGTATATCGTTTATGCAACACTAATGGTGTTTCGGTGGAATTTTTCCCTGCTGCATTTCAGGTGAAGGATCTCAGCACGGGGGTCCCATTGCTCCAAGGAAAGACTAAGAATGACTTGTATGAATGGCCGGTTCACAACTCCTATCCAATGGCCATGCTCACATCGTCCAACCCCAAAACATCTATCTCTTCGTGGCATTCTCGGCTCGGCCACCCTTCTTCTTCTATTTTAAACACTATTGTTTCTCAGTTTTCTCTTCCTATTGCTTCCAGTACTCAAAAACACTTGTCTTGTTCTGATTGTTTAATTAATAAGAGCCATAAACTGCCTTTCACAAACTCCTCTATTCTCTCATTTCGACCTCTTGAATACATTTTTAGTGATGTCTGGTCCTCACCAATTCTTTCAGTTGATAACTACAAGTACTATGTGGTTTTTATTGATCACTACTCGAGATATACATGGCTCTATCCTCTGAAACTAAAATCGCAGGTGAAAGAGGTGTTCATTGCTTACAAAGCACTGGTTGAAAACAAGTTTCAGACCTCCATTGGCACACTGTTCTCGGATAATGGGGGTGAATACATTGCCTTAAGAAGTTTTCTTTCTACTCACGGCATCACACACCTGACCTCACCGCCTCACACACCACAACACAATGGTCTCTCGGAGAGAAAACACCGCCATATTGTTGAGACTGGCCTTACCTTGCTGTCCACGGCATCGATACCAAAGAAATACTGGACGTTTGCCTTCTCTACGGCCGTGTACTTGATCAACCGTCTCCTCACCCCTACTCTCTCGATGCAATCGCCGTTTCAGATATTGTTTGGAGTAGCACCAAACTATGAGAAGCTGAGAGTGTTTGGGTGCTTATGCTTCCCTTGGTTGAGACCATACAATGCTCATAAGCTTCAAGACAAATCTCAACCTTGTGTCTTTCTTGGATATTCACCAACTCAGAGTGCTTACTTCTGTCTTGATCGCACTACAAACCGCATATATACATCTCGCCATGTCCAGTTTGTCGAGACATTGTTTCCATTCCAAGAAAAAGTACCGGTTAGTGATCCACAACCCACGAGCACACCTCCTGCTCCAGCCTCTGTTGCTACAACGATTCCGGTCAACAATGTCATGCCACAGCAACAAATGGGACCCGTGCCTGAGACTCTTCACCCCACTGCTCCTCCTCCACCGCAACCTCAGGTATTACCTTCTCACTCTTCACCTACATCATCTTCTTCCTCCTCAGAGCCCACTGCTCTTTCTCAAAATGAATCACAAACCCCGATTCAGCCAAACCTTGCTCCTTCCAATGAGCCCACTGCTCAAGAACAAAATTAGTTGCAACCCCCAACTCAGCAAACACAACAAGAAAATATATCCCAAACACAATCACCCATGTCAGTTCAACCTATTGAACCAGAAAATCCAGCTCCTGAAAACCACCAAAATATCCATAAAATGAAAACCAGGGCCAAAAATAACATTACAAAACCTATCCAAAAGTTAACTCTTCATCTTGCAGGACCCAAGCATCAATCTCCAGAACCAACAACAATTATTCAAGCTATGAAAGACAAAAAGTGGCGAGATGCTGCCATTGCAGAGTTTGATGCACACATTGTCAATCACACGTGGGATCTTGAACCACCATCACCGGATCAAAATGTGATTGGATGCAGATGGCTCTTTACAACCAAGTATCTCTCTAATGGCCAGGAAGAACGTCGCAAAGGAAGACTTGTTGCCAAGGGATATACACAACGATATGGAGTAGATTATTCAGAAACATTCAGTCCTGTTATCAAGTCTACCACCATCAGACTTGTCATCGAAGTTGCAGTAACAAAATCATGGACCTTGAAACAGCTGGACATTAACAATGCATTCCTCCAGGGTGATCTCACTGAAGTCGTCTATATGATGCAGCCACCCGGTTTTGTTGATAAAGATCGTCCTGATCATGTCTGTCGCTTGAGGAAACCAATCTATGGTCTTAAGCAAGCCCCACGCTCGTGGTATCTCTCGCTCAGACATCATCTTCTCACTATCGGCTTTATAAACTCCACTGCTGATGCCTCGCTCTTTGTTCATACACATGGCCATATTGTCACATATGTTCTTGTATATGTTGATGATATACTTGTGACTGGAAGCGACCCTGCTGTTGTTCAACAAGTTCTACAATCTTTTGCTGAAAGATTCTCCATCAAAGACCCGGTTGATCTACACTACTTCTTGGGCATTGAAGCAGTTAGGACTCCTCAAGGACTCCATCTCATGCAAAGAAAATACGTCAATGATCTCCTCAGTAAACAGAACATGGTAGACGCCAAGCCAGTGTCGACTCCATTACCAACCTCACCGAAGTTGACACTTTCTGGTGGAACTCTTCTCACTGATGCGGCTCCTTATAGATCGCTTGTTGGTAGTCTCCAGTACTTGGCATTTACTAGACCGGACATCTCCTATGCTGTAACTCGTCTCTCACAATTCATGCATCAGCCGACTATGGAGCATTGGCAGGCAGCTAAACGTGTACTCAGATACCTTGCCGGTACTCGCAGTCATGGTATCTTCTTTCACAAGAACTCTCCACTGGCACTACATGCTTTTTCCGATGCAGACTGGGCCGGTGACACTGATGATTACGTCTCCACTAATGCCTACATCATTTATCTAGGACGAAACCCGATTTCTTGGTCATCTAAGAAACAGAATGGTGTTGCTCGCTCATCAACGGAAGCAGAATATCGAGCTGTTGCCAACACAGCTTCAGAGGTAACATGGCTTTGTTCCTTACTTTCTGATCTTCGCATCGACCTTCCCACTACACCGGTTATCTACTGTGACAATGTTGGTGCTACCTATCTCTGTGCCAACCCGGTTTTTCATTCTCGTATGAAACATATTGCATTGGACTATCACTTCACGCGTAACATGATACAAGCTGGCCAGTTGCGGGTTGCTCACGTTTCCACTAGAGATCAACTCGCAGACGCATTAACCAAACCACTCCCGAGGAATCATTTTCATCAAGCTTGCAGCAAGATTGGAGTGACTACAGCCCCTCCATCTTGAGGGGGCGTAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_44Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
127Start:
4246755End:
4246881Strand:
+>A01_LTR-Copia_44
TGTATATATATGTAAATATAAATAGTAGAGGATCTCTATGTAATTAGTCTACTCCTAAACCCTACTCTCTATGTATATAAATACTCTACAAAGGCTCTAATAATATTATCACTTTCCATAATCTACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_45Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
165Start:
4336827End:
4336991Strand:
->A01_LTR-Copia_45
ACTGGGAAAAGTGCCAATTTCGACCCAAACTATTTCAGTCGTGCCAAATACGACCCGAACAATTGATCAGTGCCAAATACGACCTCAACTCAATTATAATTCAAAAAAACTACCTGAACTTCTTAAAACGTGCTTAAATCTACATTGACTCTAACAGAAGTTAGT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_46Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
161Start:
4337035End:
4337195Strand:
->A01_LTR-Copia_46
AAAGTGCCAATTTCGACCCCAACACTCTTAATCGTGCCAAATAAGACCCGAACAAATAGTCAGTGCCAAAAACGACCTCAACTCAATTATAATTTAAAAAAAAATTATCCAATTTTTTCTAAAACGTGTCTAAATCTACATTAACTCTAACAGACGTTAAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_47Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
162Start:
4338021End:
4338182Strand:
+>A01_LTR-Copia_47
ACTAACTTCTGTTAGAGTCAATGTAGATTTAGGCACGTTTTAAGAAGTTCGGGTAGTTTTTTTGAATTATAATTGAGTTGAGGTCGTATTTGGCACTGATCAATTGTTCGGGTCGTATTTGGCACGACTGAAATAGTTTGGGTCGAAATTGGCACTTTTCCC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_48Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
223Start:
4408216End:
4408438Strand:
->A01_LTR-Copia_48
TGAAGAAGATAACGTTTTATTCAAAGTTTCTTGCTTGATTACAATGGTTACATAACATCTGAATATATAGTAAAGCTGAGAGACCAACTAGGGAACAGCTCAGCATGTGACAGCACATAGCTTTAAGGAATCAAATCTGTTACACAGCTGTGTGACGTGAGCTGGAGCAGCCGTACGGAGACCGTAGTTTGGCGTCATCTGCTTTGGTCCTCTGTTACCGTTG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_49Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1640Start:
4408526End:
4410165Strand:
->A01_LTR-Copia_49
CACCCCCGCAAACTTGTGGTGGGAGCTGCCACAACACCAAGTTTGTCCCTCAGTCTACAGAAGGGCTGTTGCGCAAGGGACTTAGTGAAGATATCAGCCAGTTGTTGAGCCGCTGGAATCTGATTCACAACCAAAGCACCTAACGCCACTCGTTCGCGAACATAATGAAAATCTGTGTCAAAGTGTTTTGAACGAGTGTGAAGAGCTGGGTTCGCAGTTAGGTAGACTGCAGACAAATTATCACAGAATAGCTGAGGAGTGTCCGGAAGCGAAATACCCATTTCACCGAGGAGAGATGCCAACCACTTTAACTCAGTTGCAGTAATCGAGAGAGTACGGTACTCAGCTTCTGTGGACGATCGTGAGACCGTAGGATGGCGTTTTGCTGACCAGGAGATGATATTGGAACCGAGGAAGGTGCACATTCCTCCAGTTGATCGTCGAGTCTCTCGACACCCTGCCCAGTCGCTATCACTGAAACCATAGAGTAGAAATCCTGTCTTTGCATTTATCGTAAGACCTAGGTGAGACGTGCCCTTTAAGTAACGCAGTATGCGGCGAAGGTTGTGAAAATCTGCCACTGTCGGAGCATGCATCTTCTGACAGACGTAGTTAACTGCAAACTGACTGTCCGGTCGCGTTAGTGTCAGATACTGAAGCTTACCAGCGAGGCTCCGAAAGTAAGTAGGTTCATCAAACAGTTTATCTTGACCAACAACACGATCAAGCTGAAGAGGCAGAGGAGTAGAAGTAGAATCACAACCCGCCATGCCAGCTGTTTCAAGTAGATCCTGAGTGTACTTCTCTTGGCATAAGAACAGACCCTCTGAATAATTCTGGACTTGAATGCCAAGGAAGTAATGGACTGGACCCATATCTTTCATGCGGAAAGTTCCGTTAAGGGTAATCATCAGCCTTTTGATCAATTCTTCATTGTTCCCCGTCAGTAGCATATCGTCGACGTACAAAAGCAAGTAGATAACATCTCTGCCATGAAGATAGACGAACAGAGAAGGGTCACCATGTGTACATTTGAAGCCAAACTCGAGCAAGAATGTACTAAACTTGTCGAACCAAGCTCGTGGTGACTGTCGCGGACCATATATTGATTTACGAAGCTTATAGACGTAATGTGGTCGAGTCTTGTCTTCAAATCCCGGGGGTAGCTTCATGTAGACTGTCTCTTTGAGATCCCCGTGGAGATAGGCACTTTCAACATCTAACTGACGGATGTTCCAACCTTTGACGGAGGCAATATGAAGAACAGAGCGTATTGTTGCAGTGCGAACAACGGGGCTATAGGTCTCAACAAAATCAACACCCTCTTCTTGTTGGTTTCCTCTTGCCACCAGACGCGACTTGCGGTTCTTCAAGCTACCATCAGCGTTAAATTGAGACTTAAAAACCCATCCACAGCTTATCGGTGCAGCGTTCTCTTCAGGAGGGACTAGGTCCCATGTATGAGTGACTTCCATGTTATTAATTTCTTTTCCCATGGAAGCTGTCCATTTTGGATCTTTCAGAGCCGCAACCACTGACTTCGGCTCAGGATAACCGTTCTTGACACTCATTAGTACGTAACGCGGGTTGGGTTTCCTGATACCATCCTTTCCTCTAGTGACCATAGGATGAACAGGAGC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_50Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
2252Start:
4410402End:
4412653Strand:
->A01_LTR-Copia_50
TCTCATATGGAAACGTTTTCTCATCAAACAGGACATGTCTACTGACGTAGACTCTAGCAGTAGGTGGATGCAAACATCTATAACCTTTGTATTTTTCACTGTATCCAAGAAAAACACAGTGTAGACTCTTTGGATCAAACTTGTTCTTCCCGTAAAGACGAAGAAAGGGGTAACAACTGCTCCCAAACACGCGGAGGCTCGTGTAGACAGGCTGTGTGCCGACAAGCACTTCATAAGGACTGATATTACGAGGGAGAGTCGACGTAGGAAGCAAGTTCAAAAGATATACAGCAGTGAGAAACGCATCAACCCAAAGTTGCTGAGGTACTTTGCTCTGGAACATGAGAGACAAACCGAGTTCAGTCACATGTCGATGCTTCCTCTCAGCAACGCCATTTTGCTGAGGGGTATGAGGACATGACATGTGATGCTTGATGCCACAAGAAGATAGATACTGAGTGAACTGATTACTTGTAAATTCTCCACCTCCATCACTTTGAAAAATTTTAATATCTGATTCTAACTGATGTTCCACTGATTTCTTAAAGCTCAAGAACACGGAAAAGAAATCTGATTTCATTCTCAAAGGGTACAACCAAGTGTATCTTGAAAAATGATCGACAAACACAGCATAAAACCTGAACCCTTGAGTCGACGCAACGGGAGAAGGACCCCATAGGTCACAATGTACTCGTTCTAATGGTTTGGTTGCTACAAACGCTGAAGTAGAAAAAGGTAAACGACTAGATTTTCCAAGCTGACACGCCTCACAGAACGAAGAGCTGGATTTATTCAAGACGATGGCTTTATTCTGAGATAGACGCTGGAGAACTTTATGATGAGGATGACCGAGCCTCAAGTGCCAAACATCATCAGGTGCGGCTTGCTGTCTGTGAGAAAAGAAAGCCATGAACTGCAGGTTCTCCAAGACGTATAGATTCTTCTGCCTAGTACCTCTGGTGAGAGGTTGCCTTGTCTGTTTGTCCTTCACAACAACACTATCAGCATCAAACTCAATAGTACAGGGATAATCAGAAGTGAGTTTCGAGACAGATAACAGAGATTTCGTTATAGACGGACAAACAAGAACATCATTGAGCTTTATGTTACCTTGAAGACTAGGCAACACTGCAGTACCAACATGTGAGATAGGGAGATAATCACCATTACCAACAAGGACAGTGTCATCACCTCTGTAGGTCTGAGCCGACTGCAAGTGAGCGCTATCATTAGTGATGTGAGCTGTAGCACCAGAGTCAGCACACCACTCGTGACCAGGCACCGCGGAAAGCTCTTGACCTCTGTAAGCAGCTAAAGCGTTGTGATACTCTTCTGCTTGAAACGAGTGGTCAAAACGCTTGTAACACTTGTAGGCTGGATGACCAAACTTGTTGCAGATCTGACATGTTGGTCTGTTCTCTGAAGAAGAAGAACCACGGCCCGAACCTTGACTGATTTGTTGATGAAAGCCTCTGCCTTGAGTCGAGTAACCACCACGACCACGAGAGGATCCTCTACTCGAGCCGCGACCCCTGTTTGAGTAGCTCCCTCTGTTACCGTAAAAGGCTTGATTCGTAGCGACGTCAGAAGAAGTCTCGTAAGCAGCAAGCTTGTCGTGGAAACCGATAAGTTTGAAGACAACATCGTCGAAGTTCGGACCAGGGAACACATCCATGGAGCTCTCTATCACAGTCGTGATAGACTCATATTCACGACCCAGTCCACGAAGAACACCATAGATCTTCTCGTGCTCAGACAGAGGAGCTCCGATTGAGTCGAGTTGGTCGCAAATCAACTTCATTTCGGAGATGTATTCCGATAGAGATTTACCGCCCTTCTGAGTAGACTGAAGACGACTCTGAAGCTCGAGCTTGCGAGTAGGAGAGACACGGTTGTACTTCTGACCAAGATACACCCACAACTCCTGCGACGAGCGAAGACCATAGACACATTTGATGACGTCTTCAGAGAGAGATCCAACGAGCCACGCCATGATACGTTGATCGGTGCGAATCCATTTAGCGTAGGCAGGGTTCGGAGTCTCGACATCTTCTTCACCGGTACGGACAGTAAGGGTCAGAGAGGGCCGGGGTTCAGAGCCATTGACGTAGCCGAGAAGAGATTGGCTGTTTAAGAACTGTTCGAACTGAAACTTCCAAGAGAGGTAATTTTTGTCATTTAGCTTGAGAGTAACGCAGTGGGCGATGGTTAAAGGAGAAGTAAACGGATCACCATCCATGGTTCTGATACCA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_51Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
223Start:
4412683End:
4412905Strand:
->A01_LTR-Copia_51
TGAAGAAGATAACGTTTTATTCAAGGTTTCTTGCTTGATTACAATGGTTACATAACATCTGAATATATAGTAAAGCTGAGAGACCAACTAGGGCACAGCTCAGCATGTGACAGCACATAGTTTTAAGGAATCAAATCTGTTACACAGCTGTGTGACGTGAGCTGGAGCAGCCGTACGGAGACCGTAGTTTGGCGTCATCTGCTTTGGTCCTCTGTTACCGTTG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_52Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
201Start:
4634340End:
4634540Strand:
+>A01_LTR-Copia_52
TGGATAAGCTTCAATAAAAATAGCTTAGGATACAAGTTATTCATTAAGGAAAGTAGAATAACTTATAGATTAGGATAAAGATAAGATTCCTAGTCTCAATTGTATTAGGACAAGTTAAGAGCTCCTATATAAAGAGATCTATAATGTAAGTTGATCTCATAAGTTAAGAAAGAAATAAAACGAAGGTACTGTTTTATTAAG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_53Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4137Start:
4634575End:
4638711Strand:
+>A01_LTR-Copia_53
CTAGATTTGGTATCAGAGCTCCAGGTTATTGTGAGTGCAATGGCTGATACGAAAGCATTGACAGATATGAAAGCACTAGGAAGAAGAGAAGACGTTCCGCGTGCAGTAGTCTGTCCGATGCTCAACTCGTCCAACTATACCGTTTGGGCGAAGAGGATGAAAGTCCTACTAAAAGTTCATAAGGCTTGGGAGACAATCGATCCTGGTACAGATGAAGAAGAGAAGAATGATATCGCAACTGCACTTCTGTTTCAGTCAATACCTGAAAGCTTGATCTTACAGGTAGGAGATGATGACTCCCCTAAAGTTATTTGGGAAGCCATTAAAACCAGAAACCTTGGTGCCGAACGCGTGAAAGAAGCTCGTCTACAAACCTTAATGAATGAGTTCGACCGTCTAAGAATGAATGACTCGGACACCATTGATACTTTCTCTGGAAAGATATCTGAGCTTGCATCAAAAGCAGCCTCGTTAGGTCAAAACATCGATGAACCTAAAGTCGTGAAGAAATTTCTGAATAGCTTACCTCGGAAATTTATTCACATGACTGCATCTTTGGAGCAGTTGCTAGACTTAAATAAAACTCCTTTTGAAGATATTATTGGGAGACTTAAAGCTTATGAAGAACGCATTAAAGATGAAACATCGTATGATCAACAAAGCAACCTTCTATTCTCAAGTTCAGAGAGCTCGTCTGATCAGAACTCGAGAGGACAAGGGAGAGGATCAAATCGCGGTCGTGGTCGAGGAAACAGAGGAAGAGGACGCGGGAAAAGCAGTTCCGGTGAGTGGAACAAAGAAAAGAGGGACTACTCGCAAATCACCTGCTTTAACTGCAAGAAGAAAGGCCACTTTAAATCAGTTTGCCCTGAGAAGAAAGAAGAAAATCAAGAACTCAACAAGACCGAAACAGAGAATGCAGATGTTGCGCTCTATCTACATGAAATAGTTTTCCTTAATGAAGAAAAGGTGCTACCAAAAACACTTGAACCGAGCAAGAGAGAAGAAGGAATGTGGTACTTAGACAATGGCGCAAGTAATCACATGACTGGTGAGAAATCTTTCTTTTCAGAACTCAATGAAAACATTAAAGGAAGGGTAAAGTTTGGAGATGGTTCATGTGTGGAGATAAATGGCAAAGGATCAATCCTCTTTGAAGCAAGAACAAGGGAACAAAAGCTACTGACTGATATATATTACATACCTGAGTTGAAAAGTAATATAATCAGTTTGGGTCAAGCAACGGAACAAGGCTGCGACGTTAGAATGAAGGATAACTATCTAACGGTGCGAGATCCAAGTGGGAAATTATTGACAAAAGTACTAAGGGCTTCTAACAGACTCTATAAAGTCTTTCTCAAGGTTGGAAGCCCTATCTGTCTACTCACAAAGATCAAAGAGGAACCGTGGAGATGGCACGCCAGACTCGGACACATCAACTTCAAAACCATAAGGAACATGTCGGCTCAACAGATGGTAGAAGGATTGCCCGAGATTACAGAAGTAAAGCAAATTTGTAACTCTTGCTTGGTTGGCAAGCAAACAAGAAAATAGTTTCCCTCTACAACGTCTTTCAGAGCGACTCGTGCACTAGAGTTGTTACACGCAGATCTCTGTGGCCCAATTTCTCCTGCAACGCCATCACATAACAGATATACCTTTGTTATAATTGATGATCACACAAGGTACATGTGGTCTATCTTGTTAAGAGAGAAGAGTGATGCTTTTGAGAGATTTAAGATGTTTAAGAACCTTGTGGAGAAGGATGTCGATAAGAAAATATTAACGCTTCGTACAGACAGAGGAGGTGAGTTCACTTCTAAGGAGTTTCAGGATTACTGCAATAAAGAAGGCATCAAGCGTCAGCTAACAGCTCCTTACACACCGCAGCAAAACGGTGTGGTTGAAAGGAGAAACCGTACGCTAATGGAGATGACAAGGAGCATGTTAAAAGCAATGAATGTTCCAAACTACATGTGGGGTGAATCCGTTCGTCACACAACTTATCTTATCAACCGTGTGCCTACTAGGGCTTTAAAGAATCAAACGCCATATGAAAGCTTGAAGGGAAGAAAGCCTAGTATAGGCCACATAAGGGTTTTTGGATGCGTTGCACACGCAAAAGTGGACTCTGTTCACTTAAAGAAGTTAGACGATCGATCACATACCCTTGTTCATCTTGGCATCGAGCCTGGCTAGAAAGCCTATCGACTCTATAATCCCAACACTAAAAGGATTATAGTAAGCCGAGACGTAATCTTTGACGAGAAACAAGCTTGGGGTTGGAAGGGAGCTGATGAAGAAGACAAACGTCCTGGTGGCTTTCACATGACGTGGGGATCAATACTCGATGAAGGGAGTGGTCCGTTTGTGTTAGGCTCACATCAAGAAGAAGAAGTTGCCGCAGACAGCGATCAACAAGATGATCCAGAGCCAACACAAGAAGAAGAAACTAATGATCAGAACTCAACTCAAGCAACAAGACGTTCAACACGTCAGACAAACAAACCAAGCTACCTTGAAGATTACATTCTATTTGCAGAGTTAGAATGTGAGATGTTGCTACTCTCTATCAACGATGAACCTATCAATTTTCAAGAAGCCAAAGCTGACAAGAGGTGGACAAACGCCTGTGAAGATGAAATCGATTCTATCTACAAGAATAATACATGGAAACTAATAGACAAGCCAGCCGGTGTAAAGATCATTGGTCTCAAGTGGGTTTTCAAACTTAAGAGAAACGCAGACGGATCAATCAACAAATTCAAGGCTCGACTTGTAGCAAAAGGATATGTACAAGAGCATGGAATTGATTTCGATGAAGTTTTTGCTCCAGTGGCTCGACTAGAGACTATAAGGTTTCTAATTGGTTTGGCTGCAGCAAATAAATGGGAAATCCATCACCTAGACGTCAAGACAGCTTTCTTGCACGGAGAGTTAAATGAAGATGTCTATGTATCACAGCCTGAAGGGTTTGAAAAGAAGGGAGAAGAGCATAAAGTTTTCAAACTCTCAAAGGCTTTATATGGTTTAAAGCAAGCTCCGCGTGCTTGGAATACAAAGCTCGACCAGATTCTAAAGAAGCTGAAGTTCAAGAAGTGCACAAAAGAGAGTTCAGTGTATCGAAAGGAAGATGGAGATAGACTACTTATTGTAGCTATATATGTGGATGATCTATTTGTTACCGGGAACTCTATCAAGGCAATTAAGGACTTCAAAGTGGCAATGTCTCAACAGTTTGAGATGTCCGACTTGGGTATATTAACATATTACCTAGGTATGGAAGTAAAACAGAGTTCACAAGGCATCACAATCAAGCAAGAAGCATATGCACTACGGATACTAAAGGAAGCTGGCATGGACGATTGCAATTCAACTCATATACCGATGGAGTTTGGTCTACAACTTTCCAAGGCACTAGATGAACCAGAGATCGATGCAACCTTATACAGAAGAAGGATAGGATGCTTGAGATATCTAATGCATTCCAGACCAGACTTGGCATTCGCTATTGGAATTCTCAGCAAGTATATGCATTCACCGCTCAAGGCTCATGGTGACGCATTAAAACAAGTACTGAGGTATCTGAAAGGAACTCACGGGTATGGACTGGTGTTTAAGTGTAGTGGATCTCAGAAACTCATTGGATACAGCGACAGTAGCCATAACACAGATCCAGACGATGGTAGAAGCACGACAGGACACTTGTTCTGTTTCGGAGATACACCTATAACTTGGTGTTCAGAAACAAGACACAGTGGCTCTATCCTCTTGTGAAGCTGAATTCATGGCGGCAACAGAAGCTGCAAAGCAAGCCATATGGCTTCAAGATCTTTTGAGCGAGATCACCGGAAGAAAGACTGAGAAGACATTGATCCGTGTAGACAATAAATCAGCCATAGCATTAGCCAAGAACCCAGTGTTTCATCGTCGAAGCAAGCACATTCAGAAACGTTTTCACTTTATCAGAGAGTGTGTAGAGAGAGATCTTATTGACGTGGAGCATGTACCCGGAACAGAGCAGAAAGCGGACATCTTAACTAAAGCATTAGCAAAGATCAAGTTCAAGGAGATGAGGGAGAAGATACAAGTTCAAGACCTAAGTGAAAATGCTTTGAAGCTTAGAAGGGAGAATGT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_54Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
201Start:
4638714End:
4638914Strand:
+>A01_LTR-Copia_54
TGGATAAGCTTCAATAAAGATAGCTTATGATACAAGTTATTCATTAAGGAAAGTAGAATAACTTATAGATTAGGATAAAGATAAGATTCCTAGTCTCAATTGTATTAGGACAAGTTAAGAGCTCCTATATAAAGAGATCTATAATGTAAGTTGATCTCATAAGTTAAGAAAGAAATAAAACGAAGGTACTGTTTTATTAAG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_55Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4167Start:
4653878End:
4658044Strand:
+>A01_LTR-Copia_55
TGGTATCAGAGCATAGCTCTTTTTGATCCTTCTCCTCTGTTCGAATTTCTTTTTCCTTTCTCACGTTTGTTATCTCACCACTGTCTCGTCTGCAATGGCACAAGTTGCGCAAGTTGAGCGAGCTTTTGGAGTAACAAACATAAAAACGCACATTCCTATTGTGCTAGATTTAGACGTTTTCAATTACGACGCTTGGAGGGAATTGTTCCAAACCCACTGCCTCACGTTCGACCTATTGGGGCATATTGACGGTTCCTCTACTCCTACCGGAGACGATGATACCCCATGGCTGAAGCGCGATGGACTGGTGAAACTTTGGATCTACGGAACGTTGGCCCCGCCGCTTTTCAAATCATCCTTCAAAACAGGAGGAACAGCCAGGGACATTTGGCTTCGGATTGAAAACCAGTTCCGCAACAACAAAGAATCTCGGGCGATTCAGCTTGATAATGATCTTCGCACCAAGGAGATTGGAGATCAGACGATTCAGAAATACTCTCAGGAACTGAAATCCATCGCTGATCTCTTGGAGAATGTCGACGCTCCAGTCAGTGACAAGACGCTAGTAATGTATTTACTAAATGGTCTCAATGAGAAGTTTGACCATATCATAAACGTCATCAAACATCAGAAACCTTTCCCAAGTTTCGAGGAGGCTCGCAATATGCTGGAGCTAGAGGAGACTCGACTGAAAAAGACTACCAAGACGTCAGCTAGCCACACTGACACTTCGTCGTCTTCAACGGTTCTGATCACAACACACCGTGATGCTAAAACTGACACTCAACCACGCAATCAGGGAAGAAACAACAGAGGTAACAGACGCGGTAACAGAGGTCGAGGCAGGAACAACTACGGCTACAACAGACCTCAGTACATGTCTTGGAATGGTCCGCAACAATACTGGAATGGAGCCTACAACAATTGGCAGCAATACCCTACTCCACCATGGATGGCTTACCCCTCTGCACCTGCTTCTCACGGCATGTTCCAGACGCGACCATCAACACCTCAACAACAAGAAGCTCACATGGTTCAGCCGACCCGAGACTTTCAGGATATGTTCAGTACCATGAGCTTGGCGGAACCTACATCAAACTGGTATATGGACTCGGGTGCCTCATCTCACATCTCATCATCACCAGGTAACCTCCAGTCTGTTGTTAACTTGCGCACCGGAAACTCAATCGTTGTTGGTAATGGATCTAAAATTCCTATACACTGTTCCGGAAACACTTCTGTTCCTACTAAGTCCAGACCTTTACACCTCCAAAATGTTCTGGTCGCACCTGAAATTGTTAAAAATCTTATATCTGTCCGTCGTTTTACAAAAGATAACTGGTGCTCTGTCGAATTTGATCCATTTGGTTTTTCTGTGAAGGACCTTCAGACACGGAAAACCATTCTCCGCAGTAACAGCTCAGGCGATCTTTACTCCCTTCCATCGCCTCTCCATCAAGCTCACACTGCTCTTGTTGCTGTTTCGCCTACTTTATGGCATAAGCGTCTTTCACACGCAAATAATGAGGCTATACGCTCTCTTGTTTCTTCTTGTTCTATCAATTGTAATAAGGAAAGCTTGCAATTTTGCAATGCTTGCCAATTGGGTAAACATCTCAAACTCTCATTTTCGAAATCTCTTAATAAAAGCTCTCAGCCGTTTGAACTGATTCACTCTGACCTCTGGACTTCACCCATTCCTAGTCTTAGTGGTATTCGTTATTATGTGCTGTTTCTAGATGATTTCTCACATTATCTTTGGGTTTACCCTATGCGACAGAAGAGTGAAACGTTCTCTAAATTCTTACACTTCTCTTCTTATGTTCAGAAACAACATGGAAAAACAATTAAATCACTTCAATGTGATAATGGAGGGGAGTACAACAATTCTCAATTTCAAAAACATTTTTCTGAAAATGGGATTGTTTTTCGGTTCTCTTGTCCTCATACCTCGCAACAAAACGGTAAAGCCGAGAGGATGATAAGAACCATCAATAACTCTATTCGTTGCCTTCTTTTTCAGGCCCAGATGTCACCAGCATATTGGGTTGAAGCTCTTCATGTTGCAGCCCACAACACAAATATCCTTCCTTCTTCTGCAACAGAACGTAAAACACCTTACTCCATTCTGTTTGGTCATCCCCCGACATACGACAGTTTGCGTGTGTTCGGTTGCCTATGTTTTCCAAACCTAAACCACTCAAATCTTCACAAACTCTCTCCTAGATCGACACCTTGTCTGTTTCTAGGATATCCATCAAATCACAGAGGCTATCGGTGTCTTGATCTCAGGACAAACCGAATCATAATCTCTCGTCATGTCATCTTTGACGAGACGACCTTTCCGGCTGCTCAGAAACAATCCTCTCCATCCAATTCGTACAACTTCCTGGATGGTTCTGACTATACTTCACCGATGTTTCAATCAATCCTGCAGTCACAAACTATTCCTGTTGCTGGTACAAATTCCCCAGTAGCGCCCACTGCCTCTGAAACACAACCTCTTGCTCCTGTTGCATTACCAACAGCTCCTGCTCCTGTCCAGCGAATGACTACTCGAGGTCAGTCTGGCATCGTTAAACCTAAAAAGATTTTTAGCCTTTACAGCTCTTCAGTTTCTCGAATTCCTACAACTCATCAAAAAGCTTTGTTAGATCCAAATTGGAAACCATCAATGTTTGAAGAGTACGATGCTCAAATTAAAAATAAGACATGGAGGCTGGTTCCAAGGCCTAAAGGTGCTAACATTATTAATTCAATGTGGTTGTACAAGCACAAGTTTGATGCAGATGGAACTCCAACTCGTCACAAATCGCGGCTGGTGGCTAATGGCAAGACACAGGAGGAGGGCGTCGACTATGCTGAGACTTTCAGCCCTGTTGTCAAGCCGGCGACAATAAGGTCTGTTCTGGATATCGCTTTAAATCATGGATGGTCGATAAGGCAACTGGACGTAAAGAACGCCTTCCTCCATGGTACAATCGAAGAAGATATCTACATGCATCAGCCTCCAGGCTTTGTTGATAAGACAAAACCCCACTATGTATGCAAGCTGGAGAAAGCATTATATGGCCTCAAGCAGGCTCCAAGAGCCTGGAATGCCAGAATGAGTCAATACCTACATCGACTTGGTTTTCTAACATCAAAATCCGATGCCTCTCTTTTCGTTTACAAAAATAAAAGGGATCTTGCATACTTACTTTTATATGTAGACGACATAATCTTAACAGGTTCCAGCCCCGCTTTGATCCAGCGGATCACAGACAGTCTCAAAACAGAGTTTCCAATGTCAGATATGGGGACATTAAGCTACTTTCTCGGTATCAAAGTCGATCACAACAAAGCCGGTCTTTTCTTGTCTCAGCGTCAATATGCAACGGACATCATTGAGAGAGCAGGCATGTCCGATTGCAAACCAATCTCAACTCCAGCAGACGTCAATGCAAAGTTATCAGCTGAAGGTGGGGAACGTGTAAGCAATCCAACAGCATACAGAAGCCTAGCAGGAGCACTTCAATATCTGACCTTCACACGGCCAGACATTACCTATGCAGTTCAACAAGTATGTCTCTTCATGCATGATCCACGCCAAGCACATCTCACTGCTCTGAAACGGATTATCAGATATGTGCAAGGGACAAAGGACCATGGCTTGCAGATGTACCGATCGCAAAACTCTTCATTGACAGCTTACTCCGATGCTGACTGGGCCGGATGTCCAGACACTCGCCGCTCCACTTCAGGCTACTGTGTTTACCGAGGTAACAACTTGATATCGTGGTCATCGAAACGTCAAGACACAGTATCACGATCAAGTGCCGAGGCCGAATACAGAGGTGTCGCAAACACAGTCGCAGAAACATGCTGGATCAGAAACTTGCTTCTTGAGCTTCATCAACCGGTTTCCAAGGCAACTCTGATCTTCTGCGACAACATCAGTTCAGTATATCTGTCCGCCAACCCTGTAAAGCATCAGCGGACCAAGCATGTGGAACTCGATATTCATTTTGTCAGAGAAAAAGTGGCTCTCGGACAAGTAAAGGTACTGCACGTTCCGTCCTCTTCGCAGTACGCGGATATCTTCACCAAAGGACTCCCTTCATCACTGTTCTTGGAGTTTCGCTCCAGTCTAACCGTCCGTTCACCTACCGATTCGACTGAGGGAGG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_56Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
263Start:
4665083End:
4665345Strand:
+>A01_LTR-Copia_56
TGTTGGGATAAGCTTGAGTTAGCTTGGAGATCAAGCTAAATATATAAATAGGAAAGTCCTTGATAATTAGGAGTTATCTAGTTATCCTATGTCTTGTGTTGTTAGGACTTTATATTTATATATATATGGAGATGTCAAAGTGTGAGATAACATATGAGTTGTGTGATTGAGAGAGCTTAAGTTTTGAGGAGTTTCTTAAGCCTTAATAAGAGAGTATTCTTATTGAATTTGTGATCCTTGATTCATACGTTTGTGATTCTACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_57Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4169Start:
4665346End:
4669514Strand:
+>A01_LTR-Copia_57
CTTGGTATCAGAGCATTCTAGGCGAGATACATAAACGTGTGTGACTGATTTATTTCTGCAAACATGAGTGACGTAAAAGATGAAGACGAAGCAATCTCTAAAGGAACCGGACCATCCACCATAAAGTTTCCCATGTTAAATTCATCAAACTACACTGTATGGGCTATGCGGATGAAGATTGCCCTCAAGGTTAACAAAGTATGGGAAGTCATTGACCCAGGAACCAAACACGAAGAGAAGAACAACTTGGCAATAGCCTTGCTGTTCCAATCAATCCCCGAAGCCTTGACATTACAAGTTGGTGACCTTGATACAGGAAAAGCAGTATGGGAAGCCATTAAAGCGAGGCATGTTGGAGCTGAACGTGTGAGAGAAGCAAGACTGCAAACATTAATGGCGGAGTTTGATAGACTAAAGATGAAGGACACTGACACGATTGATACTTTTGTTGGAAAACTATCCGAAATCTCTTCAAAGTCTGCATCGTTGGGAGAAATATTAGAAGAACCAAAGCTTGTAAAGAAGTTCTTGAAGAGCTTACCAAGAAAAAAATATATTCACATTGTAGCATCTCTTGAGCAGGTTCTTGATCTGAATACTACTAGCTTCGAAGATATCGTCGGGAGATTGAAAGCTTACGAAGAGAGGATATGTGAAGATGAGGAAGAACAAACTGACGATCAAGAAAAACTAATGTATGTTAACTCCACGACAGAATCTCACCAAGAGAATTATGGCGGAACCAGAGGAAGAGGTCGCGGAGGACGAAACGGATGGAGAGGAAGAGGCCGCAGACGCTACGGCAACTTCCATACGCAGAGAGAAGCGTACAGACAAGGTCAAAACAGAGACACATCGCATATAACTTGTTTTAGATGCGATAAGACTGGACATTATGCACAAGACTGTCCCGACAGATTACTGAAACTTCAAGAGACCACAGAGAAGAAAGATGAAGAAACTCACGAAGCTGACGAGTTGATGATGCATGAAGTGGTTTATCTTAACGAACAGAAGGTAAATCCAATGATTTTCGAGAGCGAACAAGACACAAAGAACGTATGGTATCTTGATAACGGAGCGAGTAATCATATGAGTGGAGATCGTATGTTCTTCGTGACTCTTGATGAGAATGTAACAGGAAAAGTTCGCTTTGGTGATGATTCACGCATCGACATAAAAGGAAAAGGATCTGTTCGTTTTATATTTGATGGAGGCGAGAAGAAGATTTTAAAAGATGTCTACTACACACCGGGTTTAAGGAGCAACATTGTCAGTTTAGGACAAGCAACGGAAGCTGGATGCGAGGTAAGAATGAAAGACAACGAACTCCTTCTCTTTGACAGACAGGGTTACCTAATGGTCAAAACAACACGCTCAAGGAATCGTCTGTATAAGGTTGCTCTACAAGCTGATACAGTTCAACTTCTTCAAGTCTCCACAAGCTCGGAGTCTTCTAAGTGGCATGCTCGTCTTGGCCATGTTAACATGGATACAATGAAACTGATGATCAATAAAGAACTGGTCGAAGGAATTCCTCATATCGAGGTAAAGAAAGAAACCTGTGTAGGCTGCTTGCTTGGCAAGCAAGCTCGTGTACCCTTCCCAAAAACAACTCTGTTCCGAGCCACTCAACCGCTGGAATTAGTTCATGGAGACCTATGCGGACCGATTACACCCATCACACCTGGACAGAAACGTTATGTTTTTGTCCTAATAGACGACTACTCTCGATATATGTGGATAATCTTGTTAAAGGAGAAGAGTGAAGCTTTCGAAAAGTTTAAACACTTCAAGAAGATAGCAGAACTTGAAACCAGAGCTGTAATAAAAACGTTCAGGACAGATAGAGGTGGAGAATTCGTGTCTCACGAATTCAATCTATACTGCGATAAGAATGGAATCTCGAGACACCTAACAGCTCCATACTCTCCTCAACAAAACGGAGTTGTTGAGCGACGTAATCGAACCTTGCTCGAGATGACGAGAAGCATACTTAAACATATGAATGTTCCAAGTTGGCTATGGGGGGAAGCAACAAGACACGCCACTTATTTGATAAACCGTATTGCCACAAGATCACTAACCGGTGAAACTCCATATGAAGCTCTACGAAAGAAGAAACCAAACTTGAAGCATCTGAAGGTATTTGGCTGTGTATGTTACGCTAGAACAGAGGTTGCAGGGAGGAAGAAGCTCGACGATCGATCCAGATTTCTTGTACACTTGGGTACAGAACCCGGATCTAAAGCTTACCGCTTAATTGATCCCGTGAGTAAAAGGATTGTGGTGAGCCGAGATGTTGTATTTGATGAAAGTAAAGCTTGGATATGGAACGTGAGTGACCAGATAAGAGAACCTAACTCGTTCTCTATTGACGTTCGAGGTTTTGACGACAATGACAAAACAAAACCTGGAGCTACTATCGATGAACCTGAAAACGAAACAGAGTATGAAGCAGAGGATGATGGAGACAACAACGATGAAGAAGACGATGGAGAACATACACAACTAAGGAGATCATCGAGGATAAGCTCAAAACCGGCATACCTTGACGATTACGTTCTTCTTGCAGAAGCTGAAGGAGAGAGACTATTGATGGTTCTAAACGAAGAACCTTGGGACTACAATGAAGCTAAGGAACTTAAGGTTTGGGTTGATGCGTGCAAGGATGAAATCTTTTCAATAGAAAAGAATAAAACTTGGAGTCTCGTTGATCTTCCATTGGGAGTAAAGCCTATCGGCCTGAAGTGGATCTTTAAAGTAAAAAGGAATGCGGATGGAAGCATTAGTAAATTCAAAGCACGATTGGTCGCAAAAGGCTATGTTCAAAGACACGGAGTTGATTATGACGAAGTCTTTGCGCCGGTCGCTCGTATTGAAACCATCCGGTTGGTTATTGCTATAGCAGCATCAAATGGATGGGAGATCCACCATCTTGACGCCAAGACAGCTTTCCTTCATGGCGAGCTAAAGGAGGACGTGTACGTTACCCAACCTGAAGGTTTCATAGTCGAAGGAAAAGAAAATAAAGTGTACAAACTGAAGAAGGCGTTGTACGGGTTGAGACAAGCACCTAGGGCTTGGAATGTGAAGCTGAATGGGATACTCCGGGAACTTGGCTTTACTAGGTGTCCTAAGGAACCTTCACTGGATCGAAAAGACGAAAGGAAAGGCATTCTCATTATCGTGGTCTATGTGGACGACCTTCTTGTTACAGGTTCCTCGGTTTAAGCAATCCTAGAGTTCAAGAAAGAAATGTCAAGAAAGTTTGAGATAAGTGATCTAGGGAAGCTAACCTATTACTTGGGTACTGAAGTACTACAAACAGAGGAAGGTATCGTGTTGCGGCAAGATAGATATGCGATTAAAATCCTGGAGGAAGCTGGAATGAATGAATGTAACTTAACTCATGTTCATATGGATGTCAACGTGAAACTTTCAAGATCAGCACAAGAAAGGAGCATCAACGAGCGTGATTATAGAAGAAGCATAGGCTGTCTTCGCTACCTGCTCCATACTCGACCTGATCTCTCATATAGTGTTGGCGTGCTAAGTCGTTACATGCAGGAACCGAAGGAGTCTCATGGAGCAGCATTGAAGCAAATTCTTAGATATCTACGAGGAACAACTTCACTAGGTCTTCGCTACTCAAGATCAAGGAAGCAAGAGATAAGAGGCTATAGTGATAGCTCACATAATGTAGATATAGATGATGGAAGGAGCACGCATGGTCATGTGTTCTATCTTGATGAAAGCCCTATCACTTGGTGCTCACAGAAACAAGAGATTGTTGCGCTCTCATCATGCGAAGCTGAGTTCATGGCAGCAACTGAGGCAGCCAAGCAAGCCGTGTGGCTTCAGGAGTTACTTAGCGAGGTTGTTGGACGAGATATTGTCAAGGTCGCCATTCGGGTTGATAACAAATCAGCCATCGCCTTGACCAAAAACCCTGTCTTCCACGGACGAAGTAAGCACATTCATAGGCGTTTCCACTTCATAAGAGAATGTGTAGAGAGTGAGCAGATTGAAGTTGAGCACATCCCGGGAACTGAGCAAAAGGCCGACATATTGACAAAGTCACTTGGAAGGCTAAAGTTTAAAGAGATGAGAAGTTTGATTGGAGTTCAAAATGTTGGAGAAAATGAATTCAAGCTTAAAGGGGAGAA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_58Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
263Start:
4669515End:
4669777Strand:
+>A01_LTR-Copia_58
TGTTGGGATAAGCTTGAGTTAGCTTGGAGATCAAGCTAAATATATAAATAGGAAAGTCCTTGATAATTAGGAGTTATCTAGTTATCCTATGTCTTGTGTTGTTAGGACTTTATATTTATATATATATGGAGATGTTAAAGTGTGACATAACATATGAGTTGTGTGATTGAGAGAGCTTAAGTTTTGAGGAGTTTCTTAAGCCTTAATAAGAGAGTATTCTTATTGAATTTGTGATCCTTGATTCATACGTTTGTGATTCTACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_59Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
149Start:
4769699End:
4769847Strand:
+>A01_LTR-Copia_59
TGGGATTAGGATAAATATAAAGTTTCCTATATTGTTGGGATTTAGACGATTTATGTATTTCCTTTTCCTAGCTAGGTTATGCTAAAGATGTTGTATATAAACACCTCTTGGTGAATGAATAAAGGACACACAATTCTACATTATATTCA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_60Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4551Start:
4769848End:
4774398Strand:
+>A01_LTR-Copia_60
TTATATGGTATCAGAGCTAAGATCTTACCAAAATTTCTTCTAAATCAAACTCATCAACGTTTGATCTAATTCTTCTTCTACTTCTAAATTCATCGTTCTAGATGTCTATTACTACTACTCCTACTTCCGCAACTACAGGCGTTCCTCCGGAGCTATCTCCTTATCACCTCCATCCATCCTATAACCCCGGGGTTCTTATCACATCTGTTCTTCTCACTCATGAAAATTACCAGGAGTGGTCGACAGAGCTTCGGAATTCTTTACAAGCTAAGCAGAAACTTGGCTTTATTGATGGAACAATATCAAAACCATCGGAGGATAGTCCTGATTTAGCACGGTGGCTGGCAGCAAATTCAATGATCGTCGGATGGATTCGTACGTCGATTGATTCAAAAGTTCGTTCGACGGTGGCACACGTACCGGATGCTCATAAACTATGGGAATCTTTGAGACTGCGTTTCTCTGTCAAGAATGGGACTAGAGTTCATCAACTCCAGGATGCTATTACTAACTGCAAGCAGGATGGACAATCAGTTCTGGAATACTACGGCAGGCTCACGAAACTATGGGAGGAACTCCAGAATCTCAAAACCATACGTACGTGTACCTGTGCTGCGGCTGCTGATATTGAAAAAGACAAAGAAGATGCTCGAGTTCACAAGTTCCTCTTCGGGCTAGATGACTCACGCTTTATGTCTATTAGGTCACGGATCACAGACGAGGATCCTTTACCTGATCTTAACCTAGTCTACTCCAGAGTAGTTCGTGAGGAGCAGAACATGATCACAACTCGATCTACAGAACAACGAACCGATGCTTTAGGCTTCTCTGCTAAAAACGAGACCTCAAAGGATCTGTCGTTGTCGGTCAATAACTCTACACCTTCGCGCTCTAGGGATCCAGCTCGTACGTGCACACATTGTGGCAGGCCAGGGCATGATATTTCTGAGTGCTTTCTAGTACATGGGTTTCCCGAATGGTATCTTGAGAGACAAAACAACTCTACCTCGGGTACTCGTGGTGGACGTGGAGGACGTTCCAACTCAAACAGAGGCCGTGGCGGACGCGGTCGAGCAAATGCAACTCATGCATCAACTTCTATCAATGCTGATCAGATTGCTTCTTTGATCACGCTTCTACAAAACCAGCAGAGCAACCTCTCGTCCGAACGTTTGTCTGGTAAAACTACACTCACTGACGTTATTATTGACACAGGTGCATCGCACCACATGACCGGCGATCTCGCCCTACTACATGACGTACATGACATAGCTACTTCATCAGTTCTATGCCCTAATGGTCGTAACTCTCCGGCCACTAAACAGGGAACTTTGCGACTTAGCAAAGATTACATGTTGCATGATGTCCTATACGTGCCCGACTTTCATTGCACTCTCATCAGTGTTTCCAAATTATTAAAGCAAACGGGGTGTATCGCGATATTTACTGATACATTATGTGTTTTACAGGACCGTTTTTCGAGGACTCTGATTGGAGCAGGTGAAGAACGTGAGGGGGTGTACTACTTTACGGGAGTCAAAGTTGCACGAGTTCATGGGGCTACAAAGTCTTCAGATTCTTCAGTTCTGTGGCATCGTCGTCTTGGGCATCCGTCATACAAAATTCTATCTTCATTACCGGCTTTTAAATCCCTTATTATAGATTTTTCTGATTCTAGTCAATGCGATATTTGTTTTCAAGCTAAGCAAACTCGACGGGTTTTTCCCGATAGCCTTAATAAAGCTTCTGCACCTTTTGAACTTATTCATTGTGATGTTTGGGGACCATATCGCACACCAGCATCATGTGGTGCCGTATACTTTCTTACCATCGTTGATGATTTCTCTCGCGCAGTATGGACGTATTTGATGCTTGAAAAATCAGAAGTTGCTACTTTACTTAAGAACTTTTGTGCCATGTCGGAAAGGCAATTCGGACGTCCCGTTCGAATGATTCGCACGGATAATGGAACAGAGTTTACAGTCCTTCGGAAATATTTTCAGGAGCAGGGGATTGTACATCAAACTTCTTGCATTGATACACCACAACAAAATGCTCGTGTGGAACGGAAACACAGGCATATACTTAATGTGGCTCGTGCTTGCCTCTTCCAAGCACACCTTCCTTCCACGTTTTGGGGAGAAAGTATTTTAGCAGCTGCTCATCTTATTAACCGTACTCCTACAAAAGTTTTAGATGGCAAAACGCCATATGAAGTGCTTCACGGTAAACCTCCAGTCTTTGATCAACTTCGCGTTTTTGGATGTCTTGCATATGCACATAGGCGTGCGCGAGATAAAGATAAATTTGGGGCTAGGAGTCGCAAGTGTTTGTTTGTTGGTTACCCCTTTGGCAAGAAAGCATGGAGACTCTATGATCCAGAAACAAATGAATTCTTCATAAGCCGCGATGTTCTTTTCTTCGAAGACAAGTTTCCAGGGCTTCCTGATACAGAGTATGTTACACCACCAGTTATGCAAGAGGACGTAATAGACGATTGGCTACTCCCGACGGTGACATCTAGGGGGAGCACGCCAGCATCGCCACCTATTCCCTCTCTTGTGCCAACAGACTCGTCCATTCCATCTACAACAACTCAAAATCCTACAAACGCTTCTCCTACTACTGAGACTCTACCTTCATCGACGTCTCCTACTTCTATACCTTCTGATCCACTGCCTTTGTCTCCAACTACATCTCCGACTCAGGCTGTGTTACCTACGACATCAACGTCAGAATCAGAACAGCCTGACCACACTAAATCTCCAGGTCTATTGGAAGTACTTGGTCGTGGTCATCGTGCTAAAAAGCCGTCCATTCTACTCAAAAATTTTGTTGCTCATACTACAGAATCTACAAACCCCTCTCACGTTCTATCTTCTTCTGATCAGAGTTCTCTTCCACCGGTCTCAGGTAAGACACTGTATCCTATCGCTGACTACTTGTCTTCCTCTGTTTTTTCAGAGAAACATCAGGCTTTTCTTGCTCAGATCACCTCGGATTATGTTCCTGCAACCTTTAATGAAGCTATCCTTGATGAACGCTTCAAAGGTGCTATGAAAACCGAGGTCACTGCCTTAGAAGACAATCATACTTGGGACGTCACTACTTTACCCCCGGGGAAGAAGGCCATTAGCTGCCAATGGCTTTATTCCAACAAATATCGAGCTGATGGTACAATAGAGCGACCCAAAGCTCGACTGGTGGCGCATGGAAATAGACAAAAGGAAGGTCGAGACTACAAAGATACATTTGCTCCTGTCGCAAAGATGAATACTGTTCGTTTTCTACTTAAGTTAGCAGCAGCAAAGCGTTGGGAGGTACATCAGATGGATGTTCACAATGCATTTTTACATGGGGACTTAGAGGAGGAAATCTACATGGAATTACCACCAGGCTTCCGATCTTCTGATCCATCCAAAGTCTGCAGGCTTCGCAAATCACTCTATGGTTTGAAACAATCTCCTAGGTGTTGGTTTTCAAAGCTCAGTACTACACTTCTTGCCTTTGGTTTTACTCAGAGTTATGAAGACTATTCTCTTTTCTCACTTATCCAAGGAAATATATGTCTTCACATACTCGTCTATGTCGATGACTTCATTATTGCAGGCAACGATATTTCTACGATTCAGCGGTTTAAAACCTACCTTAACAAGCACTTCAAGATGAAAGATTTGGGAAAAATCAAGTACTTCCTTGGTCTCGAAGTTGCTAGAGGACCTGAGGGTATTTTTGTGTCACAGAGAAAATATGCTTTAGACATTGTTGCAGAATGTGGTCTCCTCGGTGCTAAACCATCTCCTGTCCCTACGGAGCTTAATCACAAGCTTCCATTGTCTAAAAGCCCGTGGCTTACTGATCCCGGCAAATATAGACGCCTAGTTGGTCGTCTCATCTATTTGACGTTTACTCGGCCTGAGCTAAGTTATATTGTTCATCTCCTTTCTCAGTTTATGCAAAGGCCTCGCGAAGATCATTGGCTGGCGGCCTTGAGGGTTGTACGTTACTTGAAAGGGACTCCGGACCAGGGTATTATGCTATCCTCTTCGTGTGATTTGCAGCTTACTGCTTACTGCGATGCTGATTGGTCTGCCTGTCCTATTACACGCCGGTCATTGAGTGCCTATGTGGTTCTCCTCGGTGATTCTCTTGTCTCTTGGAAGACAAAGAAGCAGCGTACTGTCTCGCGTTCATCTGCTGAAGCAGAATACCGGTCTATGGCTGATACTACGTGTGAGCTAAAGTGGCTTAAACGCCTGTTGGCTCAATTTGGTTTCTCTCATCCTCAACCAATGCGTATGTTTTGTGACAGTCAATCGGCCATTTACATCGCCAAGAACCCTGTCTTCCATGAAAGGACAAAACACGTTGAGAATGACTGTCATACAGTACGTGATGCTGTTCAATCCAAGCTTCTCACGACAGAACATATCTCTACTAAGCATCAACCTGCGGATCTCCTCACCAAGGCATTACCTACGCCTACATTTGATTACTTATTGTCCAAGTTAGGCATTCGGACACCGTCATTGCCAACTTGAGGGGGAGTAT