ID Class Order Superfamily Length Start End Strand View
Scaffold1102_LTR-Copia_17501 RetrotransposonsLTRLTR-Copia2946493065223-
Scaffold1102_LTR-Copia_17502 RetrotransposonsLTRLTR-Copia2607120671465-
Scaffold1102_LTR-Copia_17503 RetrotransposonsLTRLTR-Copia4628273083191-
Scaffold1102_LTR-Copia_17504 RetrotransposonsLTRLTR-Copia2309086591094+
Scaffold1102_LTR-Copia_17505 RetrotransposonsLTRLTR-Copia4299603796465+
Scaffold1102_LTR-Copia_17506 RetrotransposonsLTRLTR-Copia285197853100703+
Scaffold1102_LTR-Copia_17507 RetrotransposonsLTRLTR-Copia2491100704103194+
Scaffold1102_LTR-Copia_17508 RetrotransposonsLTRLTR-Copia530109731110260+
Scaffold1102_LTR-Copia_17509 RetrotransposonsLTRLTR-Copia803110806111608-

< 872 873 874 875 876 > Total 876


Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17501

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

294

Start:

64930  

End:

65223

Strand:

-

>Scaffold1102_LTR-Copia_17501

CCAGATTTTTATGAAAAACGAAATCACACTCTCCCCTTTTTAGCAACCTGGCTCTGATACCATATACACTTTTGTGTATTAGAGCATGATTCAAACAATCAGGGATAATCAGATGAAAAGATTAAAGAGATTAAGAGATTTTTAGAGAGAGAATAAAGAGAGAGAGACTCAAAACTCCATTAATTAATAACTGATGAGGTTTACAAGTATTAATAGAGAGAGCAACAAGGAAATTCGAAATGGATAAGCATGTGTAGTCAAAGGACAGGCTGGAACTCCTTTTGAATCACTTGG

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17502

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

260

Start:

71206  

End:

71465

Strand:

-

>Scaffold1102_LTR-Copia_17502

ACTTGGCTGTGCTTTCTCACATACTTGCACTAGTATAAAGGCAACTTCTCCTTTCCAGCATCATACAGGCTGTCAAAGTGATCCCTTATCCTTCCTTATCCTCCCTTATCCTCTTTGGTCGAGTTTCCTCTCTTCTCTTCACTAAGTTACCTTCTCATCCCATCAGATAACTTCCCCAAGTAGTTACTGTGGTTAAAATAAAGTTACCACAGTAAAACTCTAAAGTTACTGTCTCAGCCTCCTTGGTCTTCATCTCAATA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17503

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

462

Start:

82730  

End:

83191

Strand:

-

>Scaffold1102_LTR-Copia_17503

GAGTAAGAGATTATGAGACTAATGGAGAATCATAGTGATTAGAACTGTCTAACTTTCATTAATGAGATTAGGATACATTATATAGTGTGAGAGAGACTCTAGGGTTTCGACTACAAGCATGTAGAGTCAAAGGATAAGATAAGAATGCATTTGAACTATCCAATAGGAGTGACCGCGTGTGTGAGGCATCTTTGCTTTATGCCTTTTCCTTTCCAGCTAGAGACAGGCTGTCACACACTCCTTCTTCCTTTGGTAACGGTCTGATCCTTCAGGTGAGTGATCAGTGCTTCTTCTTATCACGGTAAGTCACTCAAGTAACTCTTGACTTAACCGCAGCTGAGGTAAGTGTGTACGGCCAAGTAGTACGGCCTTGTACGGCCTTGCCTTGTACGGACACACCTTACCCAACCTTCTCCATTCCTCCTAAGCTCCTTCTTAACCTCTCAAGACTTCTTCTCAACA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17504

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

230

Start:

90865  

End:

91094

Strand:

+

>Scaffold1102_LTR-Copia_17504

TAGTGTGTCATATCTAACAAAACCACAAGAGTGATTGTCTTGGTGTGTCATATCCAAGGGATTCACTTAGGAGTATCAAGGAGACCTCTCACATCTCTTTGTGTCACCATTCATTCCACAAACCTTGAAGCAGATTGAGTCTTTGATTCTCTGTTTGCAAGGATCTATCCCATTCCAACCATAGAAGCATCCTAGGAGTGTATTAAGTGATCATGTTCAGCACTTGCAGA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17505

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

429

Start:

96037  

End:

96465

Strand:

+

>Scaffold1102_LTR-Copia_17505

GAATCACTTTGTGAGAAGCTTTACTTTGGATACATAAAGTGCTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGCAGTTTGGATGAAGAAGGTATCCCAATTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGGACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTCGATACATAAACTGGTGGAGAATCGCCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTTGGAATAACACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCCCATAG

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17506

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2851

Start:

97853  

End:

100703

Strand:

+

>Scaffold1102_LTR-Copia_17506

GAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGTAGTTGAATAAATCTCGTAGGAATTGTGATGAAGAACTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATAACCAGGAAGTTGAATAAATCTCATAGGAGTTGGGATGAAGAAGTTATCCCACATTCAAATCAGGTGATTCCGGTTTCCCAGTTTGGGAATAGCATAGCTTCTTTGTCGTTCCAGTCAAACCTGGATGAATCACTTTGTGAGAAGCTTTACTTTGGATACATTAAATGGTGGAGAATCACCAGGAAGTTAAATAAATCTCATAGGATTTGGGACGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGATACATAAACTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAACTACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCACACTTTCAAATCAGGTGATTCCAGTCTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACGAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAACACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAAAAGCTTGATTAGGATACATAAAGTGGTGGAGAGTCACCAGGAAGTTGAATAAATCTCATAGGATTGGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGTAGAAACACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGTGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTTGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGGGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAAAACAGCTTCTTCGTCGTTTCAATCAAACCAGGATAAATCTCTTTGTGAGAAGCTTGATTTGAGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCATAGCTTCTTCGTCGTTCCAATCAATCCAGGATGAAACTCTTTGTGAGAAGCTTGATTTAGATACATAAA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17507

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2491

Start:

100704  

End:

103194

Strand:

+

>Scaffold1102_LTR-Copia_17507

CTTCGTCGTTCCAATCAATCCAGGATGAAACTCTTTGTGAGAAGCTTGATTTAGATACATAAACTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATTACCAGGAAGTTGAATAAATCTCATAGGAGTTGGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTTGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTTACTTTGGATACATAAAGTGGTGGAGAATCACCAGGAATTTGAATAAATCTCATAAGTTGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGAGAATCATAAGAAGTTGAATAAATCTCATAGGATTTGGGATGAAGAAATTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGGACAGCTTATTCGTCGTCCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGGATAAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGGGCAGCTTATTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTTGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCGGTTTCCCAGTTTGGGAATAGCACAGCTTCTTTGTCGTTCCAGTCAAACCTGGATGAATCACTTTGTGAGAAGCTTGACTTTGGATACATAAAGTGCTAGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGATGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGGACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTCGATACATAAACTGGTGGAGAATCGCCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAACACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTTACTTTGGATACATAAAGTGCTGGAGAATCACCAGGAAGTTGATTAAATCTCATAGCAGTTTGGATGAAGAAGTTATCCCTCTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGGACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATC

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17508

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

530

Start:

109731  

End:

110260

Strand:

+

>Scaffold1102_LTR-Copia_17508

AATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGATTAGCACAGCTTCTTCGTCGTTCCAATCAAACCTGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCTCTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAATCACCAGGAAGTTGAATAAATCTCATAGGAGTTGGCAAGAAGAAGTTATCCCACTTTCAAATCAGGTGATTCCAGTTTCCCAGTTTGGGAATAGCACAGCTTCTTCGTCGTTCCAATCAAACCAGGATGAATCACTTTGTGAGAAGCTTGATTTGGATACATAAAGTGGTGGAGAA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1102_LTR-Copia_17509

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

803

Start:

110806  

End:

111608

Strand:

-

>Scaffold1102_LTR-Copia_17509

TGTGCAAATATAGGGCGAGGTAGGGACATCAGGTCCGTACCATCAACCGTACGGATGAGCAGGCCGTACCACTTTACCCGGATTGACCCGAAATGGAGATGTGCAAACTTAGGGAGCAAGGAGGAATTATCTGAGCTTGTGACTGTTGGGAATGGATAAGAGAGGAGCTGGGCGTGACCTGTTGCTAGCTGGAAAGTAGCTGGTCAAAAGGTAAAGCACCTTTTGACCATGGAACACACAAGGCTCCATCTTATCCATCCATTTCAAACATGGGCAATCTGAACCATCCAAGCTTCTCTTACCAGATTCCTTTAGCCAATCAGAGACCATCACCAAGATTGTGAAGACCAGATCCAAGACTACATCTTAGCCATTCATTCTCAAGTCATTTTTAGCCATTAGATTAAGGGTTTATGATTGCAAACTTGTAAAGCCTATATAAAGGCTATGTGTGGACGTTTTAGTAACCCTTAAGTGAGTAAGGGGGTTTCCCCTCTCCTTCTCTAATCTGAAACACTAATCTTCAGTCTCTTATTCTTTCAGTCTCTCTAGTCTCTTAAGTCTCTTAATCTCTGTCCTTAAAGTCTCTCATACACTCATAAACACTCTCACCAATCTCTCTCTCTATATCACCTAGAACAAGCTCTAATCATTCTTTATTGAAGCTTATACACACACACATACTACCAGAGTAGAGATCTCTTTAAAAATCATATGGTATCAGAGCCAGGTTCATCAGAACCTGAGCTGTAGCTTCCGCACAACACAAGCTCTACCCTCAGCTAAAATCCAACCCTTGAAGA