Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_81Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1796Start:
6870685End:
6872480Strand:
->A01_LTR-Copia_81
GTATATTCCCTAATACTCCCCCTCAAGTTGGAGTGTGAAGGTTCGTAACACCCAACTTGGATAATAACAACTCAAACTGCGGTTTGCCAAGTGCCTTAGTCAAAATGTCGGCTAGCTGATCTTTAGTTCGCACATGCCGAGTAGAGATAAGACCAGCTTTAACAGCATCTCGAACACAATGACAATCACGTTCAATGTGTTTTGTTCTTTCATGAAAGACAGGATTGGCGGCAATGTGTATTGCAGCCTGATTGTCGCAAAAGAATGGCACCGGTTTGGTAACAGACACACCAAGATCCGTGACCAATGGAACTATCCATTTCATCTCTTTAGTTGCTTGAGCCATCGCTCGATACTCGGCCTCTGCAGACGAGAGTGAGACCGTATCCTGTTTCTTCGTTTTCCAGTCAATCGGGGATCCACCTAGTAAAACCACATACGAACTTAATGACCGACGAGATGCTGGACACGAACTCCAATCTGCATCACAATATATAGAGAGCTCTAGGTTGTCATTTGAACTCAGAAGAATTCCCTGACCCGGAGAACCTTTCAGGAAACGTACAACTCGCAATGCAGCACGCAAATGTTCTTCACGAGGAGACTTCATAAACTGCGAGAGTAAATGAATGGAGTAGCACAATTCTGGTCGCGTTATAGAGAGATATACCAGTCGACCAACAAGACGCCGATACACTTTCGGATCAGGAAGAAGAGGCGAGTTCTCAATGTGAAGCTTGTGATTTTGTTCAATAGGAGTGCCCACAGGTTTTGCACCAAGAAGACCAGCGTCTGCTACAACGTCCAACACATACTTTCGTTGAGATAGAAAAAATCCTTCTCCAGAACGAGCAACCTCAATACCCAAAAAATATTTTAACTTCCCTAAATCCTTCATGCGAAACTGCTTACCTAAGAACTCTTTGAACTTGGTCAGTCTCTCAATACTATTACTGGCGATGACTAGATCATCCACATAAACAAGCACACGAACTTCAACTGTTCCTTGAGAGTACGTAAACAATGAATAATCAGAATAGGATTGCACGAACCCAAACTTCTCAAGAGCCGAAGACAACTTTGTAAACCAACATCTTGGCGCTTGGCGAAGGCCATAAATAGCCTTACGCAGACGACACACTTTAGATGGATCTGGATGAGAAAAACCAGGCGGCATGCGCATATACACTTCTTCTTGAAGATCCCCATGTAGAAACGCATTATGGACATCCATTTGATGAACCTCCCAATTCTTAGCTGCCGCAATTCGTAGGAGACCCCTAACAGTAGCCATCTTAACCACCGGAGCAAACGTTTCATCAAAATCTTCACCTTCGACTTGTTTATTTCCACACGCCACTAGACGCGACTTGTGTCGTTGAATAGTTCCATCAGCATTATATTTGTCCTTGTATATCCATTGACAAGCTATGACTGTTTTGCCAGGCGGAAGAGTGGTAACATCCCATGTTCCTTGATCCTCATGAGCATCGATTTCTAGTTTCATCGAATCACGCCACACTTTCTCTTTAACAGCATCCCGATATCTCTTGGGTTCAACACCCGCTGTTACAGCTGCTAAGAATGCTTGATGCGAAGGTGAGAATGCATGATCAGATATATAATCAGCTAAAGGATACGGTGTTGTACCTGGAACGTTTGCCGAGGACGAAGACGAAGCACAGAGAGGAACGGGGTGTGTGTCTTCACTAAGCAGAGCATTGTAGTTGACGTAATCCTTGAGCTTTACAGACGGCACACGAACACGTTGTCCTCGTCCTAACAAGATTGGATCA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_82Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
2627Start:
6872677End:
6875303Strand:
->A01_LTR-Copia_82
CCGTAGTGCTCCCCCTCTCTGGTAACACAGGAGATGATTCAAATAACCAGTCAGAATCACAGTAATCCGTAGATATTGGCGTTACTGATTGTACAGGCGATGCTTCAGGCAGATGCGCTAATGGAAACTCGTCTTCATAAAACACTACATCTCGAGAGATCAAAAATTCTTTCTTATCAATATCATAAACTTTCCATCCCTTCTGACCAAAAGGATACCCCACGAAGATACACTTACGACTACGTGACCCAAACTTGTCTTTGTCTCGAGACCTCAAGTGTGTGTAACACAAGCTGCCAAAAACTCTAAGGTGACTATACTGTGGTTCTTCTCCATATAATACTTGGTAAGGTGAAGAACTCTTGAGTACTTTCGTCGGAGTGCGATTGATTAGATGAGTTGCTGTCATTATAGCTTCACCCCAGAACTTTGTCGGTAAACTTCCTTGAAACAACAGCGCACGAGCTACATTCAGTATGTGACGATGCTTTCTTTCCACACGACCATTTTGTTGTGGCGTGCCGACACATGAGGTTTGATGTAGCACTCCATTCTCTCGAAAGAACTGTGATAAACACATAAACTCAGTACCATTATCTGATCTCACCATCTTAACAGGTTTACCGAACTGCTTCTCTGTCATTTTGCAGAAATTTTGCAACACTACTCGGACCTCTGACTTCTCACGCATAAGATATGTCCAGACCGCACGGGAATGATCATCAACTACGGTTAAAAAATAGACTGAACCACACGAAGCAGGAGTTCGATACGGTCCCCAAACATCACAGTGAATTAAGGCAAAACACTCATTCGATTTATTCATACTATCATAAAAAACTTCTCTAGTTTGCTTAGCCCTATAACATGTGTCACACGGACTTAGGGTAGCAAGTTTATTGGATGAAAACATAGGTAAAACTGATAAAACAGAAGAAGATGGATGTCCAAGTCTCTGGTGCCAACGCAGTTGATCAGCTGAAGTAACAACAGGAGAAGACACACGATGAACTCTAGCAGCCATGACATCCGTGAAGTAGTACACACCACCTCGTTCCTTACCGGCTCCAATCAGGGTCCTCGTAAAACGGTCCTGTAACAAACAAATTGTATAAGTTAGTAGAGCAAAGCAATGCGTCTGCTTCAACAATTTGGATACCGAAATCAAAGAACAATTTAAATTTGGCACAAACAAAACATGATCAAGCGTGATCTGATCAGTTAATGGGAACTGTCCCGTATGCGTAGCATAGGTCTTATTGCCATCCGCAAACCCGATAGGACAGGGAACAATACTCGTTGTGTTTATGAGAAACGATATATCTCCAGTCATGTGATGTGATGCTCCAGTGTCGAGTATCAAATCACCAAGTTTACTCTTACCAGACAACTTATCAGAGGAGGATGTTGATTTCTCGTTGATCATCTGTGTGAGAGTCCTCCATTGATCCTGCGTCAGTTCAGGAAAAGAGGATGCATTGGAAGTTGTCGCATGAGCTTTTGCTCCATTGTTTCTTGTTCTGTCATAACTTCCACGACCACGTCCTCCTCGAGACGCACCTCTGTTTCCACCACCACCTCTATTTGCTGAGCGATCTTCCCACCAATCCGGAAACCCGACCAGCTGCCAACACGTAGCTTTCTCATGCCCAGAGCGACCACAATTAGAACACTGAGCACTACGCTCTCGCCTCCCAGACTCTGTTCTTGGCGTTAGTTGATCAGATCCAAGCTCCTTCTTTGTCGCAAAGCCCACTGCGTTTTGTTGTGACTCTCTTTCTTTCACCGAATTGAGACGTTGTTCTTCTCTAATTAACTTGGCATAAACTTCACCAATGTCAAGAATAGCATCAGACGAGATAATGCCTTGACACATGCCTCCATAGCGAACTTGATCTAGCCCCATTACAAACTGATGAACCTTTTCTTCTTCTCTATCTTTTTCAAATTCTGCAACTGCAGAGCATGAACACGATGGAAGTGGCTTGTACATGTCTAGCTCCTCCCAAAGCTTTGACAAACGACCATAGTACTCAATAACAGACAGACCTTCCTGTCGACAAACCGCCAACTGTTCTTTCAAGTGATGAACGCGGACCTTGTTCCCAACTGAGAAACGCTTCCGAAGATTCTCCCACAACTTGCAGGAGTCTTGAACAAACGTGACAGTTGAGCGAACCCGTGGTTCGATCGAGGTACGAATCCACCCAACTATCATAGAGTTAACGGACAGCCAGAGCTCAAGGTTCGAATCAGTAGCTAGTGGCTTCGGTATGGTACCTTCAATGAACCCTAACTTCCGTTTTGCTCGAAGAGCATTAGTCATCTCGCTTGACCATTCATTATAGTTCTCTCCAGTTAACGTCACCGACGTAATCATTGCCCCTGGATTATCCGAAGCATGAAGAGAATACGGAGTGGAGGCCTCAACCCTTTTCTTAGACGAAGTGGAGCTTTTAGAAATCACCGATTCTTCGCCCCCTTCAACCATCTTTGACTTCTCTGAACTCGAACTTCAAATTCACAACCACGAACAAGCTTCAAAGATCCGAACTTCGAAACCTTGATGCAGCAGAGTAAAGAAAAATTTAGATCTCAGAAACTTTCTGCTCTGATACCATGTAAAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_83Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
150Start:
6875297End:
6875446Strand:
->A01_LTR-Copia_83
TGTAAATCTAGCACTCTAGATTCTGAAAAGACTTTCTTATTGAACAAGAATGTACAAGACAATGTATTTATACCAAAAGACTCGACAAAGAATTGTTAAATATTCTACACCGACTTTGAATGTTTCCTAAACAGAAATGGAAACATCCTA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_84Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
326Start:
6984191End:
6984516Strand:
->A01_LTR-Copia_84
CTCACCTTGTGGCAATCTACTTCAATGTGCTTGGTTCTCTCATGGAAGACTGAGTTGGAGGCTATGTGGATTGCTGCTTGGTTGTCACAATGCATGGTCATTGGTGTAGCTTGATCAATCTCCAAGTGCTTCAGGATCCCTTTGATCCACACCAACTCGTTGGTAAGCTTCAGCATGGCTCTATACTCAGCTTCTGCACTAGAACATGAAACCACCTTCTGCTTCTTACTCTTCCAAGTAACCAAGTTACCACCAATGAATGTGCAGTAGCCAGTAGTTGATCTCCTATCAGTCCTATCTCCTGCCCAATCTGCATCACAGTAGCC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_85Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1042Start:
6984551End:
6985592Strand:
->A01_LTR-Copia_85
ACTCCAAGATCTTGTGTTCCATTCAGGTACAAGAGCACTCTCTCCACCATGTGCCAGTGATGCTCCCTTGGAGCTTGCATATGCTGGCTCACCTGATTCACAGCAAAGCAAATATCAGGTCTAGTGATGGTCAAGTAGATGAGCTTACCCACTAGCTTTCTATAAAGCTTTGGATCATGAAAAGGCTTGCTATCTTCAAGCTCCCCCTCACGTGGCGCCTTGTACCCATCTTCCATGGGCATCTTGGCTGTCTTTCCTCCATAAGCACCTGCATCTTTCAAGAGATCAAGTGTATACTTCCTTTGAGAGATGAACAAACCTTCCTTGGCTCTACACAACTCAATGCCAAGAAAGTATTTCATCTCTCCCAAGTCTTTAATCTCAAAAACAGATTTGAGAAACTCCTTGGTAGCCTTGATACCATCATTATCACTACCAGTGATGATGATATCATCAACATACACAAGGAGAACAACAATACCCAAGGGAGAAGTGAGAGTGAAGAGAGTATGATCAAGCTCACTTTTGCGGAATCCTTTTCCATTCAAAGTAGTGCTCAGCTTGTGGTACCAAGCTCTAGGAGATTGCTTGAGACCATAGATAGCTTTCTTTAGTCTCAATACATTCCCTTTCTTCACCAGATGCTCAAGACCAGGTGGTGGATGCATGTAAACCTCATCTTCTAGCTCTCCTTGAAGAAAGGCATTCTTCACATCCATTTGCCAAAGATCCCACTCGAGATTCACAGCCAAAGAGAGCACAATCCTGATAGTATGGAAGCTTAGCAACTGGAGCAAATGTATCAATGTAGTCCTCTCCATATGTTTGAGTGAAACCTCTTGCAACAAGCCTTGTCTTGCGCCTATCTATCTCTCCATTTGGAAGATACTTGATGGTGAAGATCCATCTACTAGAAACAGCTCTCTTCCCTTTTGGCAATGCACTCTCATACCATGTCTCATTCTTGATCATAGCATCACTTTCAGCCTTAACTGAATCTCTCCACTCTTGTATCAGCATTGCCTCTTCATAGCTTCTTGGA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_86Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
685Start:
6986164End:
6986848Strand:
->A01_LTR-Copia_86
CTGTTGCTCTATCTGAAGCCAAATCTTTCAGATCTTCTTGGTTCTTCTCTTCAAAATACCCTCTTTCCTCCACAAACTTCACTTCTCTAGAGATCATCACTCTCCTAGTGTCTTCATCATAGCACTTGTACCCTTTCTGGCTGGTAGAGTATCCAATAAACATAGCCTTGGAGCTCCTTGCTTCTAGCTTATTTCTCAACTCACCAGGAACCATTACATAGCATAAGCACCCAAAGACCTTGAGATGTGAGAGAACTGGCTTGTACTTGTTGAGCACCTCAAATGGCGACTTCCCTTGTAGCACAAGAGTAGGTGTCCTGTTGATCAAGTAGCAAGCAGTAACGACAGCATCACTCCAGAATCTCTTTGGGACATTGGCTTGAAACATCAAGGACCTAGCGACCTCCATCAAATGTCTGTTCTTCCTCTCAGCCACACCGTTTTGTTGAGGAGTGTATGGACAGCTAGTTTGGTGAAGAATCCCACTGCCAGATAGGTGTTGCTTGAATGCATTGCTTATGTACTCTCCTCCATTATCAGACCTGAAAACTTTAATCTTGGCATGATATTGGTTAATCACATAAGTTTGAAAGTTTCTAAATGCATCAAGCACCCTATCTTTGGTTGGAATTAAAGTTAACCAGGTGTATTTGGATTTTTCATCAATGAAAGTGACATAATACTT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_87Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
156Start:
6986823End:
6986978Strand:
->A01_LTR-Copia_87
TCATCAATGAAAGTGACATAATACTTCTGATTTTCCCTAGATAAGCAGGGAGCTGTCCAAACATCCGAGTGAACAAGATCAAAGCAATTTTCATAAATAGTAGAAGAGTTTGGAAAAACAGTTTTACAATGCTTGCCTAAAATACAAGCTTCACAA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_88Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1678Start:
7105956End:
7107633Strand:
->A01_LTR-Copia_88
TCTTACACACCCCCTCAAGACGGACGGCCATTCGAGAGTCCGATCTTGACTAGTAGAGAATCAAACCGTGTGCGAGGTAATGGCTTCGTCAGTGCGTCGGCAAGTTGATCAGCTGAGTTGACGTGAGATACGCGCAGTTCACCGCTTTGCACAAATTGTCGAACAAAATGATAGTCAAGAGCAAGATGTTTCATTCTGGAATGAAAGACCGGATTGGCAGCAAGGTATGTAGCGCCAATATTGTCACAGTAGATGACTGGTTTAGTAGGAGATGGGGCTTCAAGCTCGGACAGAAGAGACTGAAGCCAGCAGACTTCAGCTGTAGTGGATGCAAGAGACCGATACTCTGCTTCTGTTGATGATCGAGCTACACCAGTTTGTTTCTTAGATGACCAGGCAATAGGGTGACGACCAAGATAGACTATATAAGCACCAGTGGAAGTATAGTCGTCTCGGTTCCCAGCCCAATCCGCATCAGTGAACGCGTGAAGACTAGGAGTGTTGTGAGCTGGAAGAAAGATGCCGCGTGTGGTTGTGCCAGCAAGATAACGAAGGATGCGCTTGACTGCTTGCCAGTGGTCAGTGGTGGGCTTGTGCATGAACTGCGACAGCTTATTTACTGGGAAGGAGATGTCAGGCCGCGTCAATGAGAGATACTGGAGGCTGCCGACTACTGCTCGATATTCTGAAGGATCAGCCAAAGGAGTACCTGAAGACAACGTTAAAGTAGTGTTAGAACACATAGGTGTCTTGATTGAATGACAGTCAGCCATTTTTGTACGATGTAGAAGATCTAATATGTAACGACTTTGATTCAAGTGCATTCCCTCCTTTGTCCTAATTACTTCTATGCCAAGAAAGAACGACAAATCATCTAAATCTTTTAAAGAAAAACGTTGAGATAAGGATTCGATAAACCGGGATGTATGAGAGGGACTGTTTCCAGTGATGATCAAATCATCTACGTAGACAAGCATGTAGATGAGAACCCCATTCTTGTTGTAGATAAAGAGAGAGGCATCCGCTACTGAGTTCTTGAAACCAGACTGGAGAAGAAACGTGCGGAGCTCATTGTACCATGCCCGTGGGGCTTGTTTAAGTCCATAAATAGCCTTCCGGAGCTTACACACTGCAGTGGGATTATCTTTATCAATAAAACCTAGGGGTTGCATCATGTAGACATCTTCTTTGAGATGACCTTGAAGAAATGCATTGTTGACATCAAGTTGACGCAGGTTCCAATTTTTAGTAACTGCAATGCTGAGAATGGTCCTGATTGTGGCCGGCTTCACGACTGGACTAAATGTGTCATGATAATCGACACCTGGTCTTTGAGTGTAACCCTTGGCAACAAGTCTGGCTTTGTAGCGAGCTATGGAGCCATCTGCGTTTCTCTTTATGGTGAAGATCCACCTGCAACCTACAACATTAACATGATTAGCTGCTTCAGTGAGTGTTTCTAAATCCCATGAATGATTCCCTGTTTGAGCATCAAACTCATCACTCATAGCTTTGCGCCAATGGGGGCTCTTGAGGGCTTCAGCAACTGTTTTAGGAATCTGTTCCAAGAGCGAGGTAGTGGTAGTATGAAGGTTTAGTTTCTGGACTGGTTTCCGGGTACGAGTACTCGCACGAGTAGGTTGAGGAAGTTGGGTTGAAGGTGGTATAGATGGAGGAG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_89Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
2273Start:
7107822End:
7110094Strand:
->A01_LTR-Copia_89
AATGGAAAAACCGATTCATGAAAAACTACATGACGCGAAGTATAAATCCGTTTTGTTTCTCTATCAAAACAGAAATAGGCACTCTGTGTTATTGAATAGCCTAGAAAGACACAAGGTGTCGATCGTGCATCAAGCTTGTTAGATGCATATGGTCTAAGCCATGGAAAACACAGGCAGCCAAAGATCCGAAGTTTTTCATAATTTGGAACATGTCCATGTAACTTTTGAAAAGGAGTTTGAAAATTTAAAACCGGAGTTGGCATTCTGTTTATAAGATAGACAGCCGTAGCAAATGCATAAGTCCAAAACGATTTAGGCATTGAAGCATGAGATAACAGAGCAAGACCAGTCTCGACTATATGTCGATGTCTACGCTCCGATATACCGTTATGTTCTGGAGTATGCGGCGGACTTGTCATATGAGAGATGCCATGAGAAGCTAAAAAGGATGCTAACGCTATATATTCTCCCCCATTGTCAGTGTATAGAGTTCTAAGTTTGGTTTGAAATCGATTTTCAACCAAGACTTTGAATCTAGTAAAAACATCAGACACTTGGGATTTTTGTTTCAATGGATATAACCATGTATAGCGTGTAAAATGATCTACAAAGATAACATAATACTTGAAACCATCTTCTGAAATTTGTGGAGATGTCCACACATCTGAAAAGACTATGTCAAGCGGAAAAGATGATCGCAAAGTAGAATTTTTAAAAGGCAACTTGTGCATTTTATTAATAGAGCAAGAAGTGCATGGAGAAGCCATTAAAACACTAGATGTAGTAGGTAACTGATAAATAGAAACTAGTTTTTGAAGAATTGGAAAAGCAGGATGACCAAGACGCGAGTGCCAATCAGACATAGTGGTCTTGACAGCTGAAGCAAATGCAAGAGAAGGAGGTTTAGAGGTTTTTGAAAGCGGCCATGCATAGGTACCATCTTTAGGCTTGCCCTCCAGACGAAGAGCCCCCGTCTGCAAGTCTCTCACCTGAAAGTAAGTTGGAGTAAACGTGACAGCAACCCCATTAGTTGAGCATAATTGAAACACAGAAATTAAGTTCTTTTGTAACGATGGAACACATAATACACTATTAAGAAAGAAAGGTTTTGTATAAGAAGGAAGAGATAAAGAACCAGTGTGGGAGATGTTGAGGCCTGACCCATCACCAAGTAAGACACCATCACCGCCACTGTAAGGATTGTGGAGAGACAGATTAGCCAAGTCAGATGTCATGTGGTGGGAAGCGCCACTATCAAAGAGCCATGTAGATGCATCAGACATGATTGGTTGATTCATCGGAGAAGGCATGATTGCTTGATTAGCTTGAGGATGCCACGCCAGGTTGAGTTGTTGAGAGTTCCAAGACTGTTGAGGTCGCATGGCAGTCGCTTGTGGTGGCGTTGCTGCACCTCGAACAAGACGGAACTGTGGACAATACTTGGCACTATGTCCTTGTGTGCCGCATGCTTGACATCTGCCAAGATAAGGTTTGTTAAACCTTGGTTGGAATGTGGCTTGATTCCCTCTGTTCTGCGAATAGTTGTTGTGATTGTTGTTGTTGTTCTTCCAGTGAGAGCGTGGTCTAGCATCAGTAGCGTGTGCCACAATCGGAGTCGCAGTAGAAGAGTCTTTACACATGAGCATGGCCTCGCGATTAATGAGTCTTTCGTATAGCTCAGTGAACGGGATCGTAGTGTCACGGCCGTTGATAGCATCAATCTCTGGTTTGTACTCCTCAGGGAGTCCATCAAGAATTCTCTCAGTAACATCTTCTGGATCCATTGGCTTGCCGAGCAAGGCTAGCTCATCAACCTTGGACTTAACTAGGCGCAGATATTCACTAATGGTCTTGGTACCTTTGACAGAAGATTCAATTTGCTTTTTGATCTGGCGCACATGACCACGAGTCGGAATACCAAAGGTAGACAGGAGAATAGTCCACACCTCTTTTGTTGTTGTTGCGCTGGAGACGACGGTCTGAACCGGTAAGGTGATCGCACCTATGATAGCGCTGTAGAGAAGCCGGTCTTGTCGCCTCCAAGGAGCAAACGCCGGGTTTGGTTGAGCCTCGCCATGAACATTAATAGTCTGAGCAGGTGCGGTGTTGTTATCATCAATAAAGTGATGAAGTTCATGACCCTCAAGAAGCGCACGGATCTGGCGACTCCACATCAGATAGTTCGTCGTGGTGAGTTTGGTCACGCTCGACATGTTGACCGAGAGCAGGGTGGTGCGTGGATCATCGGGATTGAACACAACCGTACGTTCAGC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_90Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
990Start:
7249272End:
7250261Strand:
->A01_LTR-Copia_90
TGAAACTCAAGAAGGAGTATATAGGCTTGAAAGAGACATTCGGTTGATCAATGAATGGAAAGGACCCGGATGGAGAGCCTTGGTCAAGACATCAGCATGTTGATTCGTCGTAGTAACATGATGAAGAGAGATGAATCCTTTCTTGACCTGATCGCGAATGGTATGACAATCAACCTCGATATGTTTCGTACGCTCATGGAACACATGGTTGTTAGCAATATGCATTGCCGACTTGTTATCACAGAAGAGTTTAGCTTGACCCGTGACTGCAACATGAAGATCAGTAAGAAGTTGTTGCAACCAGATCAATTCACAAGTCGTCATAGCCATACTACGATACTCTGCCTCAGTACTACTACGGCTGATAGTGCACTGCTTCTTTGATTTCCAGCTAATCAAAGAAGAACCCAAGTAGATGCAAAAACCAGTCACAGAGCGTCTTGTATCAGGACAGGTAGCCCAGTCAGCGTCAGAGAACGCATTCAAACACAACTCTGCATCAGCCGCATAGAACAATCCCTGGCCTGGATTAGACTTCAGATATCGCAGGACATGATGAGCCGCACGTAAGTGTACATCAGTAGGTGCTGAAAGAAACTGACTGAGACGATGAACAGCGAAGGTAATGTCAGGTCTTGTGATTGTTAAGTATAGGAGACGACCAACAAGTTCCCGATAAGATGTTATATCTTCCAGAGGAATACCAGTAGTGCTGCTCATCGGAACAGTAGGATCCAAAGGAACAGCACATGGTTTTGAAGCCAGGAAACCCGTATCAGCAAAAAGATCAAGAGCATACTTGCGTTGACACAAAGAGATCCCTGTAGAATTCCTTGCAATCTCCAAACCCAAGAAGAAACGAGCCTGACCTAAGTCTTTGATCTTAAAGGCGTGATGAAGAGTTTGCTTCAGGCGAAGGACAGCTTCATCATCATTCCCCGCAATCAGAATATCATCAACATAAACCAAAACAGCAGTGAAAGAGGTTCC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_91Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
242Start:
7258425End:
7258666Strand:
+>A01_LTR-Copia_91
TGAAGCATATGACTTGGTCGTTGAGCAGTTCCGAGACTTGAGGGACGAGTTTGTTTCTGTTTTAGTTGTTTCTTGCTGAATAAGTCATCCTAATTATTAGGATCAGAGTAGCTAGACGTTGAGACTTTTACGCTAGTTTGTTATCTTCAGTTTCTATTTAAGCTTATGTAATTCCTCGTTTATGCAATAAGAAAACTATTCAGTTCATTTTCTTCTCTTAGTTTTGTGTTCTAAATACAACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_92Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
4111Start:
7258667End:
7262777Strand:
+>A01_LTR-Copia_92
AGTGGTATCAGAGCTCTTATCTTAATTGAGTAAACGAGCTGCTGTGAGAAACAAAAGAGAGATCAAAATGAGTGAGAAAGATAGGTCACTGAGCATTCCTAAGTTTGATGGTGACTATGAGCATTGGGCTATGCTCATGGAGAATTTGTTGAGATCCAAGGAATGGTGGGAACTCATCGAGACAGGAGTGTCTCAACCGGAGAGAAACGCGATCGTGACGGAGGCACAACAGACAGAAATCGCAGAACAGAAGCTGAAGGACTTGAAGGTGAAGAACTATCTCTTTGCATCTATTGACAAATCGATCTTGAAGACGATCGCAAAGAAGGATACTTCCAAAGATATCTCGGAGTCCATGAAGGTGAAGTATCAAGGCAACAAGAGGGTTCAAAGCGCTCAACTCCAGAGGCTACGAAGGAACTTTGAGGTGTTAGAGATGAAAGAAGGAGATACCATCACAGATTACTTCGCTAGAGTAATGATGGTAGCCAATGATATGAGGAATCTTGGAGAAGAGATGCCGGATGACAAGATTGTAGAGAAGATACTCAGGACACTTGTGGAAAAATTCACATACGTGGTGTGTGCGATTGAGGAATCCAAAGACATCAAGGAGCTCACGGTGGACGAGCTACAGAGTTCCCTACTGGTACACGAGCAGAATCTCAGTAAGCATGAGAATGGTGATGAACGAACACTGAAAATGGAGGGAAACAGAGGACGTGGTAGCTATGGAAGAGGAAGAGGAGGAGGTTACAGAGGAGGAAGAGGTGGTAGAGGAGGCTCCAGCTTCGACAAAAGCAATGTGGAGTGCTACAAATGTCACAAGTTAGGGCACTTCAAAAACGAGTGTCCTCTATGGGAGAGAGCAGCCAACTATGCTGAGTTGGAAGAAGACGTACTGCTGATGGCGATGGTGGATAAGAAGGAGGAGCTAGTGTGGTATCTAGACTCAGGATGCTCGAATCATATGTGCGGATCCAAAGGGTGGTTTGTCAGTCTGGATGAGAGTTTCAGACAACAAGTGAAGCTTGGTGATGATAGAAGAATGCAAGTAGAAGGAAGAGGAGACTTAAGATTGGAGATTGATGGTATTGTGCAAGTAATCTCCTCGGTCTACTTTGTGCCAGGGTTGAGAAACAATCTTCTAAGCGTGGGGCAGCTGCAACAGAAAGGCTTGAAGATCGTCATAGAAGACAACGAGTGCAGAGTTTGGCACAAACATCAGAAACGGATGATCATGCATTCAAAAATGTCTGTTAACCGTATGTTTGTCATCTTAGCTACGGTGATGGAGCCCAAGGAGTGTCTGGAGACAAATCAAGTGAGCATTACGGATGAGGCACCAGAGGAAACATGGCATAAGAGGTTTGGTCACCTTGGTCTCACCTCTCTAGCCAGTCTTGCGGAGAAAGACATGGTAACGGGTCTTCCTGCTATCGCCAAGACTGGAGCAGTCTGTGAAGTGTGCATGAAGGGGAAACAGAATCGAGCAAACATACCAAAACACAGTGAGTGGAGATCAAAGAAGAAACTGGAGCTGGTACACAGTGACATCTGCGGGCCTATCTCACCAACCTCAGAGAGTGGGAAGAGGTACATCATAAACTTTATTGACGACTTTAGTAGAAAATGTTGGACATATTTTCTCAGTGAGAAATCAGAGGCGTTAAGAGTGTTTAAGGAGTTTAAGGTGGCGGCTGAAAGAGAAACAGGAGAGTGGTTAGTATGTCTGAGAACCGATAGGGGTGGAGAGTACAACTCAAAGGCCTTCCAAGACTTCTGCGTTGACAACGGTATCAAGAGACAACTCACTGCGGCTTATACACCTCAGCAAAATGGCATCGCAGAAAGGAAGAACAGAAGCATTATGAACATGGTGAGGTGTATGTTATTTGGAATGAAAGTTCCACTGAGGTTCTGGCCTGAGGCGACGCAGTATGCAGTCCACATTCTGAACCGAAGTCCAACGGCAATACTGGGAGATGTCACTCCATCAGAGAAATGGAGCAAGCACAAACCGTCAGTAGAACATCTCCGAGTGTTTGGATGTCTAGCCTACGCCATGATCCCATATGAGAAGAGAACCAAGCTAGAAGAGAAGAGCGTTAAGTGCGTAATGTTTGGGGTTAGTAAGGAGTCAAAGGCGTACCGTCTCTATGATCCCACTACAAAGAAGATCATCATCAGTAAAGACGTAAGGTTCGATGAAGAAAAGATGTGGAATTGGGAAGAGAAACCGGATGAGGATGAAGTCTTGAAAGACATCGCTGAGACAGAAGAAGCGACAGAAGCTGTGGATACTGAGGCTGCGGGTAGAGAAGAACCACTAGAGACTCGCGGTGAAGAAGAAGAAGTTGCAGAAACCGATCAAACTGGTGAACAAGCAGTTACAAACGAAGAGACAAGAGCAGTTGGGTCAAACAGAGCTGGTAGAAACATACAAAGACCAACGTGGATGAAAGATTACGTCTGTGAAGGACTGAGTATGATCATTGAAGAAGGCGAGGCAGAGCTTATGGCTCTGTTCATTGGAGAAGACGATCCAGAGAAGTTTGAGGAAGCTATAAAAGAAGAGAAATGGAGGAAGGCGATGGAGGCAGAGATAAAGTCTATCAACGATAACAATACTTGGGAGTTGGTAGACTTGCCAGATGGTGCTAAGGTGATTGGTGTGAAATGGATTTTCAAAACCAAGTTCAACGAGAAAGGAGACATAGACAAGTTCAAGGCAAGGCTTGTAGCAAAGGGGTTTCATCAAACTCACGGCGTCGATTTTCATGAGGTCTTCGCACCTGTTGCAAGATGGGACACAATAAGGTTGATTCTTGGTTTGGCGGCTCAACAAGGGTGGATAGTCCAACAGCTTGACGTAAAGAGCGCGTTTCTTCACGGAGAGCTAAATGAGGACATGTACGTTGAGCAACCTAAGGGCTTTGAGTGCAGAGAAGAAGAAGGAAAGGTTTACAAGTTAAACAAAGCCTTGTATGGTCTGAGACAAGCTCCAAGAGTTTGGTATAGCAGGATTGAAGGTTACTTTGTCAAAGAAGGATTCCAGAAATGCTACTGCGAGCATACCTTGTTTGTGAAGACTGAGAAGGAAGGTATTCTTATCATTAGTCTTTATGTTGATGACTTGATATATACAAGTAATTCGGGTGAGCTCCTCAAGAGGTTTAAAGCCTCCATGGAAAACGAATTTGCCATGACTGATCTTGGACAGATGAAATACTTTCTCGGTGTGGAAGTTATTCAAGATGATCATGGCATTTTCGTTAGCCAAAAGAAGTATGCAGAGGACATGTTGAAGAAGTTCGGTATGGAGGAGTGCAATGCGGTGAGAAACCCAATGGTTCCTGGTAACAGACTAACCAAAGATGGAGATGGAACCAGCGTTGATCCTACTTCGTTCAAGCAGCTGGTGGGAAGTCTCAGATACTTAACCGCTACAAGGCCAGATCTCATCTACTCCGTCAACCTAGTGAGCAGATATATGGAGAAACCTGGAGAATCACATCTGTCGGCAGCAAAAAGGATCTTGAGGTATGTTCAAGGAACTCGAGAGTATGGTATTCAGTACAAAAGAGGTGGGGATGCGAGTCTAGTTGGCTATGTGGATAGCGACTATGCAGGTGATGAGGACGATAGAAAGAGTACTTCAGGGTATACCTTCATGTGGAGTGGTGGAGCAGTCTCATGGGCATCAAAGAAGCAACCTATTGTCACACTCTCCACTACGGAAGCAGAGTATGTGTCGGCAGCTTATGGGGCGTGTCAAGCTGTTTGGTTGAAGAATGTTCTCAGCGAAATTGGATTGGATCAAGAAGAAGGTATAACTATGTTCTGTGACAACAGCTCTGCAATCAAGCTTTCAAGGAATCCAGTGCTACATGGGAAGAGCAAGCATATCAGCGTAAGGTATCATTTCTTGCGTGAACTTGTCAGTGAAGGTGTGATCAATTTGGACTATTGTTCCACGTAAGAACAGATATCAGATATCATGACAAAGCCGGTGAAGTTAGACGTGTTCGAGAAGTTAAGGAAGATGTTAGGAGTTGGTCCGAAGGAAGAAGTAAACTGAAACAGAGTGTTTGCAGTTTAAGGGAGGGAT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_93Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
242Start:
7262778End:
7263019Strand:
+>A01_LTR-Copia_93
TGAAGCATATGACTTGGTCGTTGAGCAGTTCCGAGACTTGAGGGACAAGTTTGTTTTTGTTTTAGTTGTTTCTTGCTGAATAAGTCATCCTAATTATTAGGATCAGAATAGCTAGACGTTGAGACTTTTACGCTAGTTTATTATCTTCAGTTTCTATTTAAGCTTATGTAATTCCTCGTTTATGCAATAAGAAAACTATTCAGTTCATCTTCTTCTCTTAGTTTTGTGTTCTAAATACAACA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_94Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
88Start:
7289380End:
7289467Strand:
->A01_LTR-Copia_94
GTAGTTGGATGCACTCAGCTTAGCAATGTTTGCCATATCGACATGAAGGAGAGTGCTGGTGTTGGTGACAAGAGTGTCGGTGGTGTTG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_95Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
146Start:
7294842End:
7294987Strand:
+>A01_LTR-Copia_95
ACGATCTCTCCATATGATTTGACTGCAGCAGATAACTCAGGAGCTGTGATCTCCCATCTGATTCTGAAGAGCAACAACTATGATGAGTGGGCTTGTGGTTTTCGCACAGCTCTTCGTTTAAGAAAGAAGTTCGGGTTCCTGGATGG
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_96Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
119Start:
7295108End:
7295226Strand:
+>A01_LTR-Copia_96
AGATGTTCTCGGTATCTAATGGGCCGAGGAATCAGAAGATGAAGGCTGACTTAGCAACCTGCAAACAGAGTGGTATGTCTGGTGGAGGCATATTATGGGAAGCTCAACAAGATTTGGGA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_97Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
310Start:
7441630End:
7441939Strand:
+>A01_LTR-Copia_97
TGTTGAAGTAAGCTCGAAGAAAGCTTGAGTATCAAGCTATCCTAATCCTAAATAGTTTAGGATCTTTATGAGATAAGGATCAAAGTGTTTTTAGGAGTTATCTATTTACAAGTGTTTCCTTTTAGAATTAGGATATCTAAATTCTTATATAAACACAATGTCATGAGATGACATTATTGTGAGTTGTGTGATTGAGAGATTGTGGTTTTGAGTGAGTTTCCACAAAAATTAATAAGAAGAGTTAGTTCTTGTTATTCATTGAGTTCATACATACACCAAACTAGTTTGAGCAATATTGTGGTATCAGAGC
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_98Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
261Start:
7473336End:
7473596Strand:
+>A01_LTR-Copia_98
CCGGACTTGTGGAAACTTAACATATTATTAGATGTTTAATATGTTAAGATAAACACGATAAAAAATTTAGAAAGAGGAAAATAAAATTTTCTATTTATATTATGTTTGTATTTTCTATATTTCACGTGTTAAAAGGGAATTAATTGTATTTTCATATGAATAGAGGTCTAATGGAAAAATATATAAGAAACATTGTGAGTTTTATGAGTAGTTTTTAAAGCTAATAAAAAAAATTTGTTCTTCTAAATTTTTGTGTTTCTA
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_99Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
148Start:
8213421End:
8213568Strand:
->A01_LTR-Copia_99
TTTCGATCCCAACTATTTCAGTCGTGCCAAATACGACCCGAACAATTGATCAGTGCCAAATACGACATCAACTCAATTATAATTCAAAAAAACTACCAGAACTTCTTAAAACGTGCCTAAATCTACATTGACTCTAACAGAAGTTAGT
Brassica rapa (Chiifu_V3.0)
ID:
A01_LTR-Copia_100Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
149Start:
8213622End:
8213770Strand:
->A01_LTR-Copia_100
TTTCGACCCAAACACTCTCAGTCGTGCCAAATAAGACCCGAACAAATGGTCAGTGCCAAAAACGACCTCAACTCAATTATATTTTAAGAAAAATTACCCAATTTTTTTAAAACGTGTTTAAATCTACATTAACTCTAACAGAAGTTAAT