ID Class Order Superfamily Length Start End Strand View
A01_LTR-Copia_81 RetrotransposonsLTRLTR-Copia179668706856872480-
A01_LTR-Copia_82 RetrotransposonsLTRLTR-Copia262768726776875303-
A01_LTR-Copia_83 RetrotransposonsLTRLTR-Copia15068752976875446-
A01_LTR-Copia_84 RetrotransposonsLTRLTR-Copia32669841916984516-
A01_LTR-Copia_85 RetrotransposonsLTRLTR-Copia104269845516985592-
A01_LTR-Copia_86 RetrotransposonsLTRLTR-Copia68569861646986848-
A01_LTR-Copia_87 RetrotransposonsLTRLTR-Copia15669868236986978-
A01_LTR-Copia_88 RetrotransposonsLTRLTR-Copia167871059567107633-
A01_LTR-Copia_89 RetrotransposonsLTRLTR-Copia227371078227110094-
A01_LTR-Copia_90 RetrotransposonsLTRLTR-Copia99072492727250261-
A01_LTR-Copia_91 RetrotransposonsLTRLTR-Copia24272584257258666+
A01_LTR-Copia_92 RetrotransposonsLTRLTR-Copia411172586677262777+
A01_LTR-Copia_93 RetrotransposonsLTRLTR-Copia24272627787263019+
A01_LTR-Copia_94 RetrotransposonsLTRLTR-Copia8872893807289467-
A01_LTR-Copia_95 RetrotransposonsLTRLTR-Copia14672948427294987+
A01_LTR-Copia_96 RetrotransposonsLTRLTR-Copia11972951087295226+
A01_LTR-Copia_97 RetrotransposonsLTRLTR-Copia31074416307441939+
A01_LTR-Copia_98 RetrotransposonsLTRLTR-Copia26174733367473596+
A01_LTR-Copia_99 RetrotransposonsLTRLTR-Copia14882134218213568-
A01_LTR-Copia_100 RetrotransposonsLTRLTR-Copia14982136228213770-

< 5 6 7 8 9 > Total 876


Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1796

Start:

6870685  

End:

6872480

Strand:

-

>A01_LTR-Copia_81

GTATATTCCCTAATACTCCCCCTCAAGTTGGAGTGTGAAGGTTCGTAACACCCAACTTGGATAATAACAACTCAAACTGCGGTTTGCCAAGTGCCTTAGTCAAAATGTCGGCTAGCTGATCTTTAGTTCGCACATGCCGAGTAGAGATAAGACCAGCTTTAACAGCATCTCGAACACAATGACAATCACGTTCAATGTGTTTTGTTCTTTCATGAAAGACAGGATTGGCGGCAATGTGTATTGCAGCCTGATTGTCGCAAAAGAATGGCACCGGTTTGGTAACAGACACACCAAGATCCGTGACCAATGGAACTATCCATTTCATCTCTTTAGTTGCTTGAGCCATCGCTCGATACTCGGCCTCTGCAGACGAGAGTGAGACCGTATCCTGTTTCTTCGTTTTCCAGTCAATCGGGGATCCACCTAGTAAAACCACATACGAACTTAATGACCGACGAGATGCTGGACACGAACTCCAATCTGCATCACAATATATAGAGAGCTCTAGGTTGTCATTTGAACTCAGAAGAATTCCCTGACCCGGAGAACCTTTCAGGAAACGTACAACTCGCAATGCAGCACGCAAATGTTCTTCACGAGGAGACTTCATAAACTGCGAGAGTAAATGAATGGAGTAGCACAATTCTGGTCGCGTTATAGAGAGATATACCAGTCGACCAACAAGACGCCGATACACTTTCGGATCAGGAAGAAGAGGCGAGTTCTCAATGTGAAGCTTGTGATTTTGTTCAATAGGAGTGCCCACAGGTTTTGCACCAAGAAGACCAGCGTCTGCTACAACGTCCAACACATACTTTCGTTGAGATAGAAAAAATCCTTCTCCAGAACGAGCAACCTCAATACCCAAAAAATATTTTAACTTCCCTAAATCCTTCATGCGAAACTGCTTACCTAAGAACTCTTTGAACTTGGTCAGTCTCTCAATACTATTACTGGCGATGACTAGATCATCCACATAAACAAGCACACGAACTTCAACTGTTCCTTGAGAGTACGTAAACAATGAATAATCAGAATAGGATTGCACGAACCCAAACTTCTCAAGAGCCGAAGACAACTTTGTAAACCAACATCTTGGCGCTTGGCGAAGGCCATAAATAGCCTTACGCAGACGACACACTTTAGATGGATCTGGATGAGAAAAACCAGGCGGCATGCGCATATACACTTCTTCTTGAAGATCCCCATGTAGAAACGCATTATGGACATCCATTTGATGAACCTCCCAATTCTTAGCTGCCGCAATTCGTAGGAGACCCCTAACAGTAGCCATCTTAACCACCGGAGCAAACGTTTCATCAAAATCTTCACCTTCGACTTGTTTATTTCCACACGCCACTAGACGCGACTTGTGTCGTTGAATAGTTCCATCAGCATTATATTTGTCCTTGTATATCCATTGACAAGCTATGACTGTTTTGCCAGGCGGAAGAGTGGTAACATCCCATGTTCCTTGATCCTCATGAGCATCGATTTCTAGTTTCATCGAATCACGCCACACTTTCTCTTTAACAGCATCCCGATATCTCTTGGGTTCAACACCCGCTGTTACAGCTGCTAAGAATGCTTGATGCGAAGGTGAGAATGCATGATCAGATATATAATCAGCTAAAGGATACGGTGTTGTACCTGGAACGTTTGCCGAGGACGAAGACGAAGCACAGAGAGGAACGGGGTGTGTGTCTTCACTAAGCAGAGCATTGTAGTTGACGTAATCCTTGAGCTTTACAGACGGCACACGAACACGTTGTCCTCGTCCTAACAAGATTGGATCA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2627

Start:

6872677  

End:

6875303

Strand:

-

>A01_LTR-Copia_82

CCGTAGTGCTCCCCCTCTCTGGTAACACAGGAGATGATTCAAATAACCAGTCAGAATCACAGTAATCCGTAGATATTGGCGTTACTGATTGTACAGGCGATGCTTCAGGCAGATGCGCTAATGGAAACTCGTCTTCATAAAACACTACATCTCGAGAGATCAAAAATTCTTTCTTATCAATATCATAAACTTTCCATCCCTTCTGACCAAAAGGATACCCCACGAAGATACACTTACGACTACGTGACCCAAACTTGTCTTTGTCTCGAGACCTCAAGTGTGTGTAACACAAGCTGCCAAAAACTCTAAGGTGACTATACTGTGGTTCTTCTCCATATAATACTTGGTAAGGTGAAGAACTCTTGAGTACTTTCGTCGGAGTGCGATTGATTAGATGAGTTGCTGTCATTATAGCTTCACCCCAGAACTTTGTCGGTAAACTTCCTTGAAACAACAGCGCACGAGCTACATTCAGTATGTGACGATGCTTTCTTTCCACACGACCATTTTGTTGTGGCGTGCCGACACATGAGGTTTGATGTAGCACTCCATTCTCTCGAAAGAACTGTGATAAACACATAAACTCAGTACCATTATCTGATCTCACCATCTTAACAGGTTTACCGAACTGCTTCTCTGTCATTTTGCAGAAATTTTGCAACACTACTCGGACCTCTGACTTCTCACGCATAAGATATGTCCAGACCGCACGGGAATGATCATCAACTACGGTTAAAAAATAGACTGAACCACACGAAGCAGGAGTTCGATACGGTCCCCAAACATCACAGTGAATTAAGGCAAAACACTCATTCGATTTATTCATACTATCATAAAAAACTTCTCTAGTTTGCTTAGCCCTATAACATGTGTCACACGGACTTAGGGTAGCAAGTTTATTGGATGAAAACATAGGTAAAACTGATAAAACAGAAGAAGATGGATGTCCAAGTCTCTGGTGCCAACGCAGTTGATCAGCTGAAGTAACAACAGGAGAAGACACACGATGAACTCTAGCAGCCATGACATCCGTGAAGTAGTACACACCACCTCGTTCCTTACCGGCTCCAATCAGGGTCCTCGTAAAACGGTCCTGTAACAAACAAATTGTATAAGTTAGTAGAGCAAAGCAATGCGTCTGCTTCAACAATTTGGATACCGAAATCAAAGAACAATTTAAATTTGGCACAAACAAAACATGATCAAGCGTGATCTGATCAGTTAATGGGAACTGTCCCGTATGCGTAGCATAGGTCTTATTGCCATCCGCAAACCCGATAGGACAGGGAACAATACTCGTTGTGTTTATGAGAAACGATATATCTCCAGTCATGTGATGTGATGCTCCAGTGTCGAGTATCAAATCACCAAGTTTACTCTTACCAGACAACTTATCAGAGGAGGATGTTGATTTCTCGTTGATCATCTGTGTGAGAGTCCTCCATTGATCCTGCGTCAGTTCAGGAAAAGAGGATGCATTGGAAGTTGTCGCATGAGCTTTTGCTCCATTGTTTCTTGTTCTGTCATAACTTCCACGACCACGTCCTCCTCGAGACGCACCTCTGTTTCCACCACCACCTCTATTTGCTGAGCGATCTTCCCACCAATCCGGAAACCCGACCAGCTGCCAACACGTAGCTTTCTCATGCCCAGAGCGACCACAATTAGAACACTGAGCACTACGCTCTCGCCTCCCAGACTCTGTTCTTGGCGTTAGTTGATCAGATCCAAGCTCCTTCTTTGTCGCAAAGCCCACTGCGTTTTGTTGTGACTCTCTTTCTTTCACCGAATTGAGACGTTGTTCTTCTCTAATTAACTTGGCATAAACTTCACCAATGTCAAGAATAGCATCAGACGAGATAATGCCTTGACACATGCCTCCATAGCGAACTTGATCTAGCCCCATTACAAACTGATGAACCTTTTCTTCTTCTCTATCTTTTTCAAATTCTGCAACTGCAGAGCATGAACACGATGGAAGTGGCTTGTACATGTCTAGCTCCTCCCAAAGCTTTGACAAACGACCATAGTACTCAATAACAGACAGACCTTCCTGTCGACAAACCGCCAACTGTTCTTTCAAGTGATGAACGCGGACCTTGTTCCCAACTGAGAAACGCTTCCGAAGATTCTCCCACAACTTGCAGGAGTCTTGAACAAACGTGACAGTTGAGCGAACCCGTGGTTCGATCGAGGTACGAATCCACCCAACTATCATAGAGTTAACGGACAGCCAGAGCTCAAGGTTCGAATCAGTAGCTAGTGGCTTCGGTATGGTACCTTCAATGAACCCTAACTTCCGTTTTGCTCGAAGAGCATTAGTCATCTCGCTTGACCATTCATTATAGTTCTCTCCAGTTAACGTCACCGACGTAATCATTGCCCCTGGATTATCCGAAGCATGAAGAGAATACGGAGTGGAGGCCTCAACCCTTTTCTTAGACGAAGTGGAGCTTTTAGAAATCACCGATTCTTCGCCCCCTTCAACCATCTTTGACTTCTCTGAACTCGAACTTCAAATTCACAACCACGAACAAGCTTCAAAGATCCGAACTTCGAAACCTTGATGCAGCAGAGTAAAGAAAAATTTAGATCTCAGAAACTTTCTGCTCTGATACCATGTAAAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

150

Start:

6875297  

End:

6875446

Strand:

-

>A01_LTR-Copia_83

TGTAAATCTAGCACTCTAGATTCTGAAAAGACTTTCTTATTGAACAAGAATGTACAAGACAATGTATTTATACCAAAAGACTCGACAAAGAATTGTTAAATATTCTACACCGACTTTGAATGTTTCCTAAACAGAAATGGAAACATCCTA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

326

Start:

6984191  

End:

6984516

Strand:

-

>A01_LTR-Copia_84

CTCACCTTGTGGCAATCTACTTCAATGTGCTTGGTTCTCTCATGGAAGACTGAGTTGGAGGCTATGTGGATTGCTGCTTGGTTGTCACAATGCATGGTCATTGGTGTAGCTTGATCAATCTCCAAGTGCTTCAGGATCCCTTTGATCCACACCAACTCGTTGGTAAGCTTCAGCATGGCTCTATACTCAGCTTCTGCACTAGAACATGAAACCACCTTCTGCTTCTTACTCTTCCAAGTAACCAAGTTACCACCAATGAATGTGCAGTAGCCAGTAGTTGATCTCCTATCAGTCCTATCTCCTGCCCAATCTGCATCACAGTAGCC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1042

Start:

6984551  

End:

6985592

Strand:

-

>A01_LTR-Copia_85

ACTCCAAGATCTTGTGTTCCATTCAGGTACAAGAGCACTCTCTCCACCATGTGCCAGTGATGCTCCCTTGGAGCTTGCATATGCTGGCTCACCTGATTCACAGCAAAGCAAATATCAGGTCTAGTGATGGTCAAGTAGATGAGCTTACCCACTAGCTTTCTATAAAGCTTTGGATCATGAAAAGGCTTGCTATCTTCAAGCTCCCCCTCACGTGGCGCCTTGTACCCATCTTCCATGGGCATCTTGGCTGTCTTTCCTCCATAAGCACCTGCATCTTTCAAGAGATCAAGTGTATACTTCCTTTGAGAGATGAACAAACCTTCCTTGGCTCTACACAACTCAATGCCAAGAAAGTATTTCATCTCTCCCAAGTCTTTAATCTCAAAAACAGATTTGAGAAACTCCTTGGTAGCCTTGATACCATCATTATCACTACCAGTGATGATGATATCATCAACATACACAAGGAGAACAACAATACCCAAGGGAGAAGTGAGAGTGAAGAGAGTATGATCAAGCTCACTTTTGCGGAATCCTTTTCCATTCAAAGTAGTGCTCAGCTTGTGGTACCAAGCTCTAGGAGATTGCTTGAGACCATAGATAGCTTTCTTTAGTCTCAATACATTCCCTTTCTTCACCAGATGCTCAAGACCAGGTGGTGGATGCATGTAAACCTCATCTTCTAGCTCTCCTTGAAGAAAGGCATTCTTCACATCCATTTGCCAAAGATCCCACTCGAGATTCACAGCCAAAGAGAGCACAATCCTGATAGTATGGAAGCTTAGCAACTGGAGCAAATGTATCAATGTAGTCCTCTCCATATGTTTGAGTGAAACCTCTTGCAACAAGCCTTGTCTTGCGCCTATCTATCTCTCCATTTGGAAGATACTTGATGGTGAAGATCCATCTACTAGAAACAGCTCTCTTCCCTTTTGGCAATGCACTCTCATACCATGTCTCATTCTTGATCATAGCATCACTTTCAGCCTTAACTGAATCTCTCCACTCTTGTATCAGCATTGCCTCTTCATAGCTTCTTGGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

685

Start:

6986164  

End:

6986848

Strand:

-

>A01_LTR-Copia_86

CTGTTGCTCTATCTGAAGCCAAATCTTTCAGATCTTCTTGGTTCTTCTCTTCAAAATACCCTCTTTCCTCCACAAACTTCACTTCTCTAGAGATCATCACTCTCCTAGTGTCTTCATCATAGCACTTGTACCCTTTCTGGCTGGTAGAGTATCCAATAAACATAGCCTTGGAGCTCCTTGCTTCTAGCTTATTTCTCAACTCACCAGGAACCATTACATAGCATAAGCACCCAAAGACCTTGAGATGTGAGAGAACTGGCTTGTACTTGTTGAGCACCTCAAATGGCGACTTCCCTTGTAGCACAAGAGTAGGTGTCCTGTTGATCAAGTAGCAAGCAGTAACGACAGCATCACTCCAGAATCTCTTTGGGACATTGGCTTGAAACATCAAGGACCTAGCGACCTCCATCAAATGTCTGTTCTTCCTCTCAGCCACACCGTTTTGTTGAGGAGTGTATGGACAGCTAGTTTGGTGAAGAATCCCACTGCCAGATAGGTGTTGCTTGAATGCATTGCTTATGTACTCTCCTCCATTATCAGACCTGAAAACTTTAATCTTGGCATGATATTGGTTAATCACATAAGTTTGAAAGTTTCTAAATGCATCAAGCACCCTATCTTTGGTTGGAATTAAAGTTAACCAGGTGTATTTGGATTTTTCATCAATGAAAGTGACATAATACTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

156

Start:

6986823  

End:

6986978

Strand:

-

>A01_LTR-Copia_87

TCATCAATGAAAGTGACATAATACTTCTGATTTTCCCTAGATAAGCAGGGAGCTGTCCAAACATCCGAGTGAACAAGATCAAAGCAATTTTCATAAATAGTAGAAGAGTTTGGAAAAACAGTTTTACAATGCTTGCCTAAAATACAAGCTTCACAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1678

Start:

7105956  

End:

7107633

Strand:

-

>A01_LTR-Copia_88

TCTTACACACCCCCTCAAGACGGACGGCCATTCGAGAGTCCGATCTTGACTAGTAGAGAATCAAACCGTGTGCGAGGTAATGGCTTCGTCAGTGCGTCGGCAAGTTGATCAGCTGAGTTGACGTGAGATACGCGCAGTTCACCGCTTTGCACAAATTGTCGAACAAAATGATAGTCAAGAGCAAGATGTTTCATTCTGGAATGAAAGACCGGATTGGCAGCAAGGTATGTAGCGCCAATATTGTCACAGTAGATGACTGGTTTAGTAGGAGATGGGGCTTCAAGCTCGGACAGAAGAGACTGAAGCCAGCAGACTTCAGCTGTAGTGGATGCAAGAGACCGATACTCTGCTTCTGTTGATGATCGAGCTACACCAGTTTGTTTCTTAGATGACCAGGCAATAGGGTGACGACCAAGATAGACTATATAAGCACCAGTGGAAGTATAGTCGTCTCGGTTCCCAGCCCAATCCGCATCAGTGAACGCGTGAAGACTAGGAGTGTTGTGAGCTGGAAGAAAGATGCCGCGTGTGGTTGTGCCAGCAAGATAACGAAGGATGCGCTTGACTGCTTGCCAGTGGTCAGTGGTGGGCTTGTGCATGAACTGCGACAGCTTATTTACTGGGAAGGAGATGTCAGGCCGCGTCAATGAGAGATACTGGAGGCTGCCGACTACTGCTCGATATTCTGAAGGATCAGCCAAAGGAGTACCTGAAGACAACGTTAAAGTAGTGTTAGAACACATAGGTGTCTTGATTGAATGACAGTCAGCCATTTTTGTACGATGTAGAAGATCTAATATGTAACGACTTTGATTCAAGTGCATTCCCTCCTTTGTCCTAATTACTTCTATGCCAAGAAAGAACGACAAATCATCTAAATCTTTTAAAGAAAAACGTTGAGATAAGGATTCGATAAACCGGGATGTATGAGAGGGACTGTTTCCAGTGATGATCAAATCATCTACGTAGACAAGCATGTAGATGAGAACCCCATTCTTGTTGTAGATAAAGAGAGAGGCATCCGCTACTGAGTTCTTGAAACCAGACTGGAGAAGAAACGTGCGGAGCTCATTGTACCATGCCCGTGGGGCTTGTTTAAGTCCATAAATAGCCTTCCGGAGCTTACACACTGCAGTGGGATTATCTTTATCAATAAAACCTAGGGGTTGCATCATGTAGACATCTTCTTTGAGATGACCTTGAAGAAATGCATTGTTGACATCAAGTTGACGCAGGTTCCAATTTTTAGTAACTGCAATGCTGAGAATGGTCCTGATTGTGGCCGGCTTCACGACTGGACTAAATGTGTCATGATAATCGACACCTGGTCTTTGAGTGTAACCCTTGGCAACAAGTCTGGCTTTGTAGCGAGCTATGGAGCCATCTGCGTTTCTCTTTATGGTGAAGATCCACCTGCAACCTACAACATTAACATGATTAGCTGCTTCAGTGAGTGTTTCTAAATCCCATGAATGATTCCCTGTTTGAGCATCAAACTCATCACTCATAGCTTTGCGCCAATGGGGGCTCTTGAGGGCTTCAGCAACTGTTTTAGGAATCTGTTCCAAGAGCGAGGTAGTGGTAGTATGAAGGTTTAGTTTCTGGACTGGTTTCCGGGTACGAGTACTCGCACGAGTAGGTTGAGGAAGTTGGGTTGAAGGTGGTATAGATGGAGGAG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2273

Start:

7107822  

End:

7110094

Strand:

-

>A01_LTR-Copia_89

AATGGAAAAACCGATTCATGAAAAACTACATGACGCGAAGTATAAATCCGTTTTGTTTCTCTATCAAAACAGAAATAGGCACTCTGTGTTATTGAATAGCCTAGAAAGACACAAGGTGTCGATCGTGCATCAAGCTTGTTAGATGCATATGGTCTAAGCCATGGAAAACACAGGCAGCCAAAGATCCGAAGTTTTTCATAATTTGGAACATGTCCATGTAACTTTTGAAAAGGAGTTTGAAAATTTAAAACCGGAGTTGGCATTCTGTTTATAAGATAGACAGCCGTAGCAAATGCATAAGTCCAAAACGATTTAGGCATTGAAGCATGAGATAACAGAGCAAGACCAGTCTCGACTATATGTCGATGTCTACGCTCCGATATACCGTTATGTTCTGGAGTATGCGGCGGACTTGTCATATGAGAGATGCCATGAGAAGCTAAAAAGGATGCTAACGCTATATATTCTCCCCCATTGTCAGTGTATAGAGTTCTAAGTTTGGTTTGAAATCGATTTTCAACCAAGACTTTGAATCTAGTAAAAACATCAGACACTTGGGATTTTTGTTTCAATGGATATAACCATGTATAGCGTGTAAAATGATCTACAAAGATAACATAATACTTGAAACCATCTTCTGAAATTTGTGGAGATGTCCACACATCTGAAAAGACTATGTCAAGCGGAAAAGATGATCGCAAAGTAGAATTTTTAAAAGGCAACTTGTGCATTTTATTAATAGAGCAAGAAGTGCATGGAGAAGCCATTAAAACACTAGATGTAGTAGGTAACTGATAAATAGAAACTAGTTTTTGAAGAATTGGAAAAGCAGGATGACCAAGACGCGAGTGCCAATCAGACATAGTGGTCTTGACAGCTGAAGCAAATGCAAGAGAAGGAGGTTTAGAGGTTTTTGAAAGCGGCCATGCATAGGTACCATCTTTAGGCTTGCCCTCCAGACGAAGAGCCCCCGTCTGCAAGTCTCTCACCTGAAAGTAAGTTGGAGTAAACGTGACAGCAACCCCATTAGTTGAGCATAATTGAAACACAGAAATTAAGTTCTTTTGTAACGATGGAACACATAATACACTATTAAGAAAGAAAGGTTTTGTATAAGAAGGAAGAGATAAAGAACCAGTGTGGGAGATGTTGAGGCCTGACCCATCACCAAGTAAGACACCATCACCGCCACTGTAAGGATTGTGGAGAGACAGATTAGCCAAGTCAGATGTCATGTGGTGGGAAGCGCCACTATCAAAGAGCCATGTAGATGCATCAGACATGATTGGTTGATTCATCGGAGAAGGCATGATTGCTTGATTAGCTTGAGGATGCCACGCCAGGTTGAGTTGTTGAGAGTTCCAAGACTGTTGAGGTCGCATGGCAGTCGCTTGTGGTGGCGTTGCTGCACCTCGAACAAGACGGAACTGTGGACAATACTTGGCACTATGTCCTTGTGTGCCGCATGCTTGACATCTGCCAAGATAAGGTTTGTTAAACCTTGGTTGGAATGTGGCTTGATTCCCTCTGTTCTGCGAATAGTTGTTGTGATTGTTGTTGTTGTTCTTCCAGTGAGAGCGTGGTCTAGCATCAGTAGCGTGTGCCACAATCGGAGTCGCAGTAGAAGAGTCTTTACACATGAGCATGGCCTCGCGATTAATGAGTCTTTCGTATAGCTCAGTGAACGGGATCGTAGTGTCACGGCCGTTGATAGCATCAATCTCTGGTTTGTACTCCTCAGGGAGTCCATCAAGAATTCTCTCAGTAACATCTTCTGGATCCATTGGCTTGCCGAGCAAGGCTAGCTCATCAACCTTGGACTTAACTAGGCGCAGATATTCACTAATGGTCTTGGTACCTTTGACAGAAGATTCAATTTGCTTTTTGATCTGGCGCACATGACCACGAGTCGGAATACCAAAGGTAGACAGGAGAATAGTCCACACCTCTTTTGTTGTTGTTGCGCTGGAGACGACGGTCTGAACCGGTAAGGTGATCGCACCTATGATAGCGCTGTAGAGAAGCCGGTCTTGTCGCCTCCAAGGAGCAAACGCCGGGTTTGGTTGAGCCTCGCCATGAACATTAATAGTCTGAGCAGGTGCGGTGTTGTTATCATCAATAAAGTGATGAAGTTCATGACCCTCAAGAAGCGCACGGATCTGGCGACTCCACATCAGATAGTTCGTCGTGGTGAGTTTGGTCACGCTCGACATGTTGACCGAGAGCAGGGTGGTGCGTGGATCATCGGGATTGAACACAACCGTACGTTCAGC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

990

Start:

7249272  

End:

7250261

Strand:

-

>A01_LTR-Copia_90

TGAAACTCAAGAAGGAGTATATAGGCTTGAAAGAGACATTCGGTTGATCAATGAATGGAAAGGACCCGGATGGAGAGCCTTGGTCAAGACATCAGCATGTTGATTCGTCGTAGTAACATGATGAAGAGAGATGAATCCTTTCTTGACCTGATCGCGAATGGTATGACAATCAACCTCGATATGTTTCGTACGCTCATGGAACACATGGTTGTTAGCAATATGCATTGCCGACTTGTTATCACAGAAGAGTTTAGCTTGACCCGTGACTGCAACATGAAGATCAGTAAGAAGTTGTTGCAACCAGATCAATTCACAAGTCGTCATAGCCATACTACGATACTCTGCCTCAGTACTACTACGGCTGATAGTGCACTGCTTCTTTGATTTCCAGCTAATCAAAGAAGAACCCAAGTAGATGCAAAAACCAGTCACAGAGCGTCTTGTATCAGGACAGGTAGCCCAGTCAGCGTCAGAGAACGCATTCAAACACAACTCTGCATCAGCCGCATAGAACAATCCCTGGCCTGGATTAGACTTCAGATATCGCAGGACATGATGAGCCGCACGTAAGTGTACATCAGTAGGTGCTGAAAGAAACTGACTGAGACGATGAACAGCGAAGGTAATGTCAGGTCTTGTGATTGTTAAGTATAGGAGACGACCAACAAGTTCCCGATAAGATGTTATATCTTCCAGAGGAATACCAGTAGTGCTGCTCATCGGAACAGTAGGATCCAAAGGAACAGCACATGGTTTTGAAGCCAGGAAACCCGTATCAGCAAAAAGATCAAGAGCATACTTGCGTTGACACAAAGAGATCCCTGTAGAATTCCTTGCAATCTCCAAACCCAAGAAGAAACGAGCCTGACCTAAGTCTTTGATCTTAAAGGCGTGATGAAGAGTTTGCTTCAGGCGAAGGACAGCTTCATCATCATTCCCCGCAATCAGAATATCATCAACATAAACCAAAACAGCAGTGAAAGAGGTTCC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

242

Start:

7258425  

End:

7258666

Strand:

+

>A01_LTR-Copia_91

TGAAGCATATGACTTGGTCGTTGAGCAGTTCCGAGACTTGAGGGACGAGTTTGTTTCTGTTTTAGTTGTTTCTTGCTGAATAAGTCATCCTAATTATTAGGATCAGAGTAGCTAGACGTTGAGACTTTTACGCTAGTTTGTTATCTTCAGTTTCTATTTAAGCTTATGTAATTCCTCGTTTATGCAATAAGAAAACTATTCAGTTCATTTTCTTCTCTTAGTTTTGTGTTCTAAATACAACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4111

Start:

7258667  

End:

7262777

Strand:

+

>A01_LTR-Copia_92

AGTGGTATCAGAGCTCTTATCTTAATTGAGTAAACGAGCTGCTGTGAGAAACAAAAGAGAGATCAAAATGAGTGAGAAAGATAGGTCACTGAGCATTCCTAAGTTTGATGGTGACTATGAGCATTGGGCTATGCTCATGGAGAATTTGTTGAGATCCAAGGAATGGTGGGAACTCATCGAGACAGGAGTGTCTCAACCGGAGAGAAACGCGATCGTGACGGAGGCACAACAGACAGAAATCGCAGAACAGAAGCTGAAGGACTTGAAGGTGAAGAACTATCTCTTTGCATCTATTGACAAATCGATCTTGAAGACGATCGCAAAGAAGGATACTTCCAAAGATATCTCGGAGTCCATGAAGGTGAAGTATCAAGGCAACAAGAGGGTTCAAAGCGCTCAACTCCAGAGGCTACGAAGGAACTTTGAGGTGTTAGAGATGAAAGAAGGAGATACCATCACAGATTACTTCGCTAGAGTAATGATGGTAGCCAATGATATGAGGAATCTTGGAGAAGAGATGCCGGATGACAAGATTGTAGAGAAGATACTCAGGACACTTGTGGAAAAATTCACATACGTGGTGTGTGCGATTGAGGAATCCAAAGACATCAAGGAGCTCACGGTGGACGAGCTACAGAGTTCCCTACTGGTACACGAGCAGAATCTCAGTAAGCATGAGAATGGTGATGAACGAACACTGAAAATGGAGGGAAACAGAGGACGTGGTAGCTATGGAAGAGGAAGAGGAGGAGGTTACAGAGGAGGAAGAGGTGGTAGAGGAGGCTCCAGCTTCGACAAAAGCAATGTGGAGTGCTACAAATGTCACAAGTTAGGGCACTTCAAAAACGAGTGTCCTCTATGGGAGAGAGCAGCCAACTATGCTGAGTTGGAAGAAGACGTACTGCTGATGGCGATGGTGGATAAGAAGGAGGAGCTAGTGTGGTATCTAGACTCAGGATGCTCGAATCATATGTGCGGATCCAAAGGGTGGTTTGTCAGTCTGGATGAGAGTTTCAGACAACAAGTGAAGCTTGGTGATGATAGAAGAATGCAAGTAGAAGGAAGAGGAGACTTAAGATTGGAGATTGATGGTATTGTGCAAGTAATCTCCTCGGTCTACTTTGTGCCAGGGTTGAGAAACAATCTTCTAAGCGTGGGGCAGCTGCAACAGAAAGGCTTGAAGATCGTCATAGAAGACAACGAGTGCAGAGTTTGGCACAAACATCAGAAACGGATGATCATGCATTCAAAAATGTCTGTTAACCGTATGTTTGTCATCTTAGCTACGGTGATGGAGCCCAAGGAGTGTCTGGAGACAAATCAAGTGAGCATTACGGATGAGGCACCAGAGGAAACATGGCATAAGAGGTTTGGTCACCTTGGTCTCACCTCTCTAGCCAGTCTTGCGGAGAAAGACATGGTAACGGGTCTTCCTGCTATCGCCAAGACTGGAGCAGTCTGTGAAGTGTGCATGAAGGGGAAACAGAATCGAGCAAACATACCAAAACACAGTGAGTGGAGATCAAAGAAGAAACTGGAGCTGGTACACAGTGACATCTGCGGGCCTATCTCACCAACCTCAGAGAGTGGGAAGAGGTACATCATAAACTTTATTGACGACTTTAGTAGAAAATGTTGGACATATTTTCTCAGTGAGAAATCAGAGGCGTTAAGAGTGTTTAAGGAGTTTAAGGTGGCGGCTGAAAGAGAAACAGGAGAGTGGTTAGTATGTCTGAGAACCGATAGGGGTGGAGAGTACAACTCAAAGGCCTTCCAAGACTTCTGCGTTGACAACGGTATCAAGAGACAACTCACTGCGGCTTATACACCTCAGCAAAATGGCATCGCAGAAAGGAAGAACAGAAGCATTATGAACATGGTGAGGTGTATGTTATTTGGAATGAAAGTTCCACTGAGGTTCTGGCCTGAGGCGACGCAGTATGCAGTCCACATTCTGAACCGAAGTCCAACGGCAATACTGGGAGATGTCACTCCATCAGAGAAATGGAGCAAGCACAAACCGTCAGTAGAACATCTCCGAGTGTTTGGATGTCTAGCCTACGCCATGATCCCATATGAGAAGAGAACCAAGCTAGAAGAGAAGAGCGTTAAGTGCGTAATGTTTGGGGTTAGTAAGGAGTCAAAGGCGTACCGTCTCTATGATCCCACTACAAAGAAGATCATCATCAGTAAAGACGTAAGGTTCGATGAAGAAAAGATGTGGAATTGGGAAGAGAAACCGGATGAGGATGAAGTCTTGAAAGACATCGCTGAGACAGAAGAAGCGACAGAAGCTGTGGATACTGAGGCTGCGGGTAGAGAAGAACCACTAGAGACTCGCGGTGAAGAAGAAGAAGTTGCAGAAACCGATCAAACTGGTGAACAAGCAGTTACAAACGAAGAGACAAGAGCAGTTGGGTCAAACAGAGCTGGTAGAAACATACAAAGACCAACGTGGATGAAAGATTACGTCTGTGAAGGACTGAGTATGATCATTGAAGAAGGCGAGGCAGAGCTTATGGCTCTGTTCATTGGAGAAGACGATCCAGAGAAGTTTGAGGAAGCTATAAAAGAAGAGAAATGGAGGAAGGCGATGGAGGCAGAGATAAAGTCTATCAACGATAACAATACTTGGGAGTTGGTAGACTTGCCAGATGGTGCTAAGGTGATTGGTGTGAAATGGATTTTCAAAACCAAGTTCAACGAGAAAGGAGACATAGACAAGTTCAAGGCAAGGCTTGTAGCAAAGGGGTTTCATCAAACTCACGGCGTCGATTTTCATGAGGTCTTCGCACCTGTTGCAAGATGGGACACAATAAGGTTGATTCTTGGTTTGGCGGCTCAACAAGGGTGGATAGTCCAACAGCTTGACGTAAAGAGCGCGTTTCTTCACGGAGAGCTAAATGAGGACATGTACGTTGAGCAACCTAAGGGCTTTGAGTGCAGAGAAGAAGAAGGAAAGGTTTACAAGTTAAACAAAGCCTTGTATGGTCTGAGACAAGCTCCAAGAGTTTGGTATAGCAGGATTGAAGGTTACTTTGTCAAAGAAGGATTCCAGAAATGCTACTGCGAGCATACCTTGTTTGTGAAGACTGAGAAGGAAGGTATTCTTATCATTAGTCTTTATGTTGATGACTTGATATATACAAGTAATTCGGGTGAGCTCCTCAAGAGGTTTAAAGCCTCCATGGAAAACGAATTTGCCATGACTGATCTTGGACAGATGAAATACTTTCTCGGTGTGGAAGTTATTCAAGATGATCATGGCATTTTCGTTAGCCAAAAGAAGTATGCAGAGGACATGTTGAAGAAGTTCGGTATGGAGGAGTGCAATGCGGTGAGAAACCCAATGGTTCCTGGTAACAGACTAACCAAAGATGGAGATGGAACCAGCGTTGATCCTACTTCGTTCAAGCAGCTGGTGGGAAGTCTCAGATACTTAACCGCTACAAGGCCAGATCTCATCTACTCCGTCAACCTAGTGAGCAGATATATGGAGAAACCTGGAGAATCACATCTGTCGGCAGCAAAAAGGATCTTGAGGTATGTTCAAGGAACTCGAGAGTATGGTATTCAGTACAAAAGAGGTGGGGATGCGAGTCTAGTTGGCTATGTGGATAGCGACTATGCAGGTGATGAGGACGATAGAAAGAGTACTTCAGGGTATACCTTCATGTGGAGTGGTGGAGCAGTCTCATGGGCATCAAAGAAGCAACCTATTGTCACACTCTCCACTACGGAAGCAGAGTATGTGTCGGCAGCTTATGGGGCGTGTCAAGCTGTTTGGTTGAAGAATGTTCTCAGCGAAATTGGATTGGATCAAGAAGAAGGTATAACTATGTTCTGTGACAACAGCTCTGCAATCAAGCTTTCAAGGAATCCAGTGCTACATGGGAAGAGCAAGCATATCAGCGTAAGGTATCATTTCTTGCGTGAACTTGTCAGTGAAGGTGTGATCAATTTGGACTATTGTTCCACGTAAGAACAGATATCAGATATCATGACAAAGCCGGTGAAGTTAGACGTGTTCGAGAAGTTAAGGAAGATGTTAGGAGTTGGTCCGAAGGAAGAAGTAAACTGAAACAGAGTGTTTGCAGTTTAAGGGAGGGAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

242

Start:

7262778  

End:

7263019

Strand:

+

>A01_LTR-Copia_93

TGAAGCATATGACTTGGTCGTTGAGCAGTTCCGAGACTTGAGGGACAAGTTTGTTTTTGTTTTAGTTGTTTCTTGCTGAATAAGTCATCCTAATTATTAGGATCAGAATAGCTAGACGTTGAGACTTTTACGCTAGTTTATTATCTTCAGTTTCTATTTAAGCTTATGTAATTCCTCGTTTATGCAATAAGAAAACTATTCAGTTCATCTTCTTCTCTTAGTTTTGTGTTCTAAATACAACA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

88

Start:

7289380  

End:

7289467

Strand:

-

>A01_LTR-Copia_94

GTAGTTGGATGCACTCAGCTTAGCAATGTTTGCCATATCGACATGAAGGAGAGTGCTGGTGTTGGTGACAAGAGTGTCGGTGGTGTTG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

146

Start:

7294842  

End:

7294987

Strand:

+

>A01_LTR-Copia_95

ACGATCTCTCCATATGATTTGACTGCAGCAGATAACTCAGGAGCTGTGATCTCCCATCTGATTCTGAAGAGCAACAACTATGATGAGTGGGCTTGTGGTTTTCGCACAGCTCTTCGTTTAAGAAAGAAGTTCGGGTTCCTGGATGG

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

119

Start:

7295108  

End:

7295226

Strand:

+

>A01_LTR-Copia_96

AGATGTTCTCGGTATCTAATGGGCCGAGGAATCAGAAGATGAAGGCTGACTTAGCAACCTGCAAACAGAGTGGTATGTCTGGTGGAGGCATATTATGGGAAGCTCAACAAGATTTGGGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

310

Start:

7441630  

End:

7441939

Strand:

+

>A01_LTR-Copia_97

TGTTGAAGTAAGCTCGAAGAAAGCTTGAGTATCAAGCTATCCTAATCCTAAATAGTTTAGGATCTTTATGAGATAAGGATCAAAGTGTTTTTAGGAGTTATCTATTTACAAGTGTTTCCTTTTAGAATTAGGATATCTAAATTCTTATATAAACACAATGTCATGAGATGACATTATTGTGAGTTGTGTGATTGAGAGATTGTGGTTTTGAGTGAGTTTCCACAAAAATTAATAAGAAGAGTTAGTTCTTGTTATTCATTGAGTTCATACATACACCAAACTAGTTTGAGCAATATTGTGGTATCAGAGC

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

261

Start:

7473336  

End:

7473596

Strand:

+

>A01_LTR-Copia_98

CCGGACTTGTGGAAACTTAACATATTATTAGATGTTTAATATGTTAAGATAAACACGATAAAAAATTTAGAAAGAGGAAAATAAAATTTTCTATTTATATTATGTTTGTATTTTCTATATTTCACGTGTTAAAAGGGAATTAATTGTATTTTCATATGAATAGAGGTCTAATGGAAAAATATATAAGAAACATTGTGAGTTTTATGAGTAGTTTTTAAAGCTAATAAAAAAAATTTGTTCTTCTAAATTTTTGTGTTTCTA

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

148

Start:

8213421  

End:

8213568

Strand:

-

>A01_LTR-Copia_99

TTTCGATCCCAACTATTTCAGTCGTGCCAAATACGACCCGAACAATTGATCAGTGCCAAATACGACATCAACTCAATTATAATTCAAAAAAACTACCAGAACTTCTTAAAACGTGCCTAAATCTACATTGACTCTAACAGAAGTTAGT

Brassica rapa (Chiifu_V3.0)

ID:

A01_LTR-Copia_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

149

Start:

8213622  

End:

8213770

Strand:

-

>A01_LTR-Copia_100

TTTCGACCCAAACACTCTCAGTCGTGCCAAATAAGACCCGAACAAATGGTCAGTGCCAAAAACGACCTCAACTCAATTATATTTTAAGAAAAATTACCCAATTTTTTTAAAACGTGTTTAAATCTACATTAACTCTAACAGAAGTTAAT