ID Class Order Superfamily Length Start End Strand View
A05_LTR-Caulimovirus_41 RetrotransposonsLTRLTR-Caulimovirus61973703967371014-
A05_LTR-Caulimovirus_42 RetrotransposonsLTRLTR-Caulimovirus31598241799824493+
A05_LTR-Caulimovirus_43 RetrotransposonsLTRLTR-Caulimovirus625798244989830754+
A05_LTR-Caulimovirus_44 RetrotransposonsLTRLTR-Caulimovirus653998308619837399-
A05_LTR-Caulimovirus_45 RetrotransposonsLTRLTR-Caulimovirus27798374049837680-
A05_LTR-Caulimovirus_46 RetrotransposonsLTRLTR-Caulimovirus8771148219311483069+
A05_LTR-Caulimovirus_47 RetrotransposonsLTRLTR-Caulimovirus3331149505011495382+
A05_LTR-Caulimovirus_48 RetrotransposonsLTRLTR-Caulimovirus1331149539011495522+
A05_LTR-Caulimovirus_49 RetrotransposonsLTRLTR-Caulimovirus4761149551511495990-
A05_LTR-Caulimovirus_50 RetrotransposonsLTRLTR-Caulimovirus2011204611012046310+
A05_LTR-Caulimovirus_51 RetrotransposonsLTRLTR-Caulimovirus2811204697012047250+
A05_LTR-Caulimovirus_52 RetrotransposonsLTRLTR-Caulimovirus1171204828112048397+
A05_LTR-Caulimovirus_53 RetrotransposonsLTRLTR-Caulimovirus8481205000512050852+
A05_LTR-Caulimovirus_54 RetrotransposonsLTRLTR-Caulimovirus23081223456612236873+
A05_LTR-Caulimovirus_55 RetrotransposonsLTRLTR-Caulimovirus2391223755912237797+
A05_LTR-Caulimovirus_56 RetrotransposonsLTRLTR-Caulimovirus2801509444515094724+
A05_LTR-Caulimovirus_57 RetrotransposonsLTRLTR-Caulimovirus12021509569715096898+
A05_LTR-Caulimovirus_58 RetrotransposonsLTRLTR-Caulimovirus3141802752418027837+
A05_LTR-Caulimovirus_59 RetrotransposonsLTRLTR-Caulimovirus6001970956119710160+
A05_LTR-Caulimovirus_60 RetrotransposonsLTRLTR-Caulimovirus14881971059219712079+

< 3 4 5 6 7 > Total 37


Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

619

Start:

7370396  

End:

7371014

Strand:

-

>A05_LTR-Caulimovirus_41

AACGGACCGTCGTGTTGACAAAGTCTTATTGACAGACGAGGGTATGGTAATTTCCAAGTATTGGGAGCAATATGGGCATTACTCTAGCCTAGCTCAACCACCGTTAGGAAATTACCTCCCCACGAAAATCGTGTTGACAGCGTCGTATTGACAGAACCGCTTATGCTTAATTAATGCAACGGACAGAATCGGGACTTGCGACCGAAGATAGAAATCAAAGCTTATCAAAGATGAGATAAGTTCTGGAAAACTTGGGAGTTTAGAAGAACATTGGAGAGAGAAAATATAGAGAGAGGTTTTTATGAAATTATTAGATGATATTTCACAATGGGTATACACACATATATATAGTACAAGATAAGACGCTGACATAAGCGCTTACCTCAGCGATTACATCATCGCTTACATCACACGCTAGTAGCGATTACATCATCGCTTACATCATTATTCATTATACTTATTTTACATAATTAAACACACTTATCTTACATAATTATACATTGCATACGACTTTCTTAGTGGTCCATTTCGAACTCGATGATGTGTTTCTCACAACATCCGTAGTGATCGTCTGGACATTCGAACACATCTCCTGGATATTCGTACACATTCTCTGGCT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

315

Start:

9824179  

End:

9824493

Strand:

+

>A05_LTR-Caulimovirus_42

ATGGTATCAAAGCCTATAGTCTTGCGAAAAGGGTTGATAGAATCATGGTTTATCACTGATTGATTTAAGAAATCTGGAAAACAATTTCCTCATGATGACTAACTCAAATCCTACTTCGATTGAATCTCCTTTTGCTATTTCAACCTTACCCAGAAATAAAAGCCGTTCATCATCCTCTAATATAAATTCCCTATATGAAATCGAATATGTTCCGGACGACCAATTACCTGAAACTACCCTTCCCCTAGTAAACCCATATGAATACTTCGCAAAAAAATCCAGTGCCTTCTCCGTCAAAGGAGTTCGCGAGCTCAT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6257

Start:

9824498  

End:

9830754

Strand:

+

>A05_LTR-Caulimovirus_43

CCATCTTCCAGCCGAAAGGTGATGGAGTATGTCCAATCCAGCAGATTCTCGTCCTGTCAAGTTCCAGCCACCGAAGAAGAGCAGTTCATTTCTTTGAACATCCCGGAGAACTTACCCAGATTGTGGCAGCAGCAAGGCTATACTCACCTTCATTTTGGTGTAGTAAGAATTGGCTTGACCTTACATGCTAGAAAAGGTCTACCTGTCATAGCCCGAATTGCGTTGATAGACTCCCGATTAAAGTCATACCAGCAGGCTTGCATCGGAACAGTTCAAACAACATTAAATGCAGGGACAGTATTCGTTACACTGTTTCCAAACTTTAATGTCTCATTGCAAGATCCAAATCTGTTGAAGACGCTCAAGGTTCAGCTTCAACTAATCGGAGCACCTATGCAAGAGAAGACTGTAGTAGCCACGCTACATCACCAAATTGTTTACAGAATTCAAGATCACACTCTTGATCTTGTTCTGCCCTCATCAGATGAAGCACTATACCTCGAAGTCTCATCAGCATCTCAAGCGTCTAGCTCAATACAAATCTCTCGGCAGATCTCTCGCGAAGAACTACTCAAACGATTGCCAGAATCATGGGTGACAAGTTATGAGAAGCTTCATCAAGCTACCCAATCGCCTATACAATCCTCAGAAATCAGCTTTCACTCCCAAAAGGATGGAACGACGGAGATCAAATTTGAAAAGCCAAGATCGTCGTCCTTCAGAAAACAATTGTTCACACAATTCACCATCCAAGTCGATGAAGAAGACTTCCACGGCCCAGCACAAAAACAAGACATCCCGAAACCTTGTCGATTTGACAAAGATGGAAGAATAATCTATCCTTTTATTGATGAAGACGGACATTGCCGCTTTGACGTCTGCAACTGCACCGCCTGTTCAGAAACTTACGATGAATCCGATAATGAAAAACGAAGGCGGAGACGAAAGAAAAAAGACCCTCTCTACAAAAGGTACCTAGAAGGAGATCCTACTGTTGGTCCACTTGGAGATGACAAGTACGACTTCATAGTCGAATACTCTAGCCAAAAAGAATAAACTTAACAACAAATCATGATGATAGATCCCAACGACTTTCCTCCTCAAGAAGACTTCATCAAGGACAACATCGCTCATTGTCCAAAGATTCTCTCACAAGCCATCAATCCTTCGGGTCCCAACGAGATGAGTCAAGCAGAAAAAGTACTCAATTGGCAAACCGAGAACTCCCTCGCCCAAAATAGGCTATTATCAACAATCAATAATAAGGTTGATCAACTAGCAAATAGCTATAATAAGAGGTTCCAAAGCCTCCAAGGAGCCATCACAGAAATACATGGTCGGCTTAACAATCTCCATCAAGAAATGATGTCTATGGCGAAACACATGATGGTAGATACTAATCAATTCCGCAGCAAAGAAGCAGAGACGGCTAGTCTAAACAATCAGCTGAAAGATCTCCAAAGTAGCCTCGAGAGCATGGTTCGCAATCAACGACGATCTGAATATTTCAATCCTCTTGAAAGTGCCTCAATACCGACGTATCAAGGATCCTACTCTCCTGGATTTCTATCAGGATATAAAACCCCAAAATCAAGAAATCCACTACCGGGTTTTCTGTCCTCTGATGAAATCTTTACGTCTCGTTATGGCTCAACTTCAGCTGCATATCCAAAGACTAAACCAGTCCGATCAAAATCCCGACGCCAAAAGGACTCGGAATTCCAAGACAACCCATTCAAGAAACAAGCTCCAACTCCAGCTCTAACGTCATCTTCTAGTCACGATTCAGTCGACGAAAAGAAGAAGGGACACGACATCGGAATTATCGAATTCTCGATGACAAGTCTCCTCAACACCCTTGGTGATTCCTCAGCAATGATGACTAATCAATTACAGTCAGCACAAAAGGACCCTCAGTCCTCAAAAGAAGTTGCAAAAATCAAACATCTCTCAGACACAAGCTCTGACGAATACACAAGCGAATCTGAGGACGAATCACTGCCGAAGCAATTTACGATTGGTGAAACTTCCAACACTCCTAAACAAGAGCCAACATCAATGAAATCAACTCAAGCGGTGACAAATGAATTTTGAGCCTACTCAACAAGAAATGCCCAATAGGCATTTTTCTTCGAAGGTTATGGTCTTCACATTTGATGACATTCCTTTCAACAAATGGAATGATGTCTAGATGAATTCCATGCATGGATGAGTTCTGAAGCCATCACATCCCCACTGCATTTGGTAATTCAGCAATTCACTGCAAGACTATCTGGGCACTCAAAGAATGGTGGAACTCACTCGGAGAATATAGACAACATCAAGTCTATCAAACAACAATACCGTTACTTCTCGGAGAAATTCACAGAGAATTTATCGGTACTCCCACGCACCAAAAAGAACAGATACAAGAAGAGTTCTTCTCTGCAAAATGTTGCTCTCTCAAAAGAAGGATCTCGCTAAACATTTTGAAAGGCAGACACGAAGATATTACGCTCTCAACGGCCTCAACAATCCAAGCCTCAAGCACTCTATCTCTCTTCCATCGATGATATCTTAGTCAGCAGACTAAGCTGTACATCAGAGATCAAGGTCAAACCGTCGAAGAAATTTCCATCGGTCAGATCCAACAGTACGTTTTCAGAACGCTCGATAAGCTCTGCAAACAAAAGGAGTTCTGGATGGAATTCATGGATAGATCGAAACAATTAACGAAGATATGTGCAAGACCAGATCTATCAATCAAGTGTTCAAAGTCCAAGAAATCGTGTTCTTGCGACAATCATGAGAAGCGACGAAAATTCAAGAAGCGTCTCTCTAAGCATTCCTCCAAATTCAGACGTAAAGGATTTTTCCGAAAGAAAAGGAGTTTCAAGAAGTCAACAAAATGATTTCTATGTCGAAGAGAAGGACATTACGCAAAGAATTGTCCAAACAAGTCCACAAAGAAGAAGCAATATCTGATCAATTCAATCTCGGAGATCGCACCTGACATAGATCTCGAAGGCCATGATTTAGAGTCTGTTCTATCCTATGACAGCGACGACAACGACGCTATATGTGGCTACTCAGATTATGACGATTCATCCGAATCATCTCAAGATGAAGAAGAAGACTGTTGCTTCAAAATTACAAAAATGCCAAAACAAGACGAGATAAAGACTCCACATCTGCCAGTAACCATCCTCGATCCATCTTGTAAAGAAGATCCGGTTCATGTTATTGCATTCATAGACACAGGAGCTCACACCACTATATTAAATCCAAAAATCTTACTTCCATCTATGTGGCTACCTCATCAACAGGAGTTCCGTGTTGCAAACTCTGGATCATTAACCATCAGGCTCAAGTCCAAACCGATAACGATCGAGATTTTCCCAGGATGTTGCATCACTACTGAAGTACTTGGTTCCACAGCACCAGGAAAAGATTTAATTCTGGGATGGGATTCATATCACGCCTTCAAAAAGGCTTATGATATTTCAATTGAGTTACGAGGATTAAGATGGAAAGGCTCTTTCAAGGCTTTCACAACAATCCCATGTCTCTTCACAATAGAAGAAAAAATTTCTCAAGAATTCATGAAGATCAAAGAAGAGATGACTACAACATCGTGTGCAGAATCACACACAGATTTCCTCCAGAAATGTAGCAACCCCCTATGGCTAAATTCAGAATTCTTCGTATCACTGTCATTCAAGGAGAATGTTCTCACCACACCAACTAAAGCGAGTCATGCTGGAATGCCACCAACTCTACTGGATCAAGCAAACGATGAATGCGGCCAATTGGTAACCCAATGAATAGTCTCAGCGACAAATTCCCCATGGGCGTGCAAAGCATTCTACGTCAACAACCGTGCAGAACAAGCAAGAGGAAAACTCAGGCTACTCATTGACTATAAGCCACTCAATTAATATCTACAAGACATCAAGTTCCCATTGCCGAATAAAAAAGCACTTCTCCAACATTTGCAAGGAGCAACTATATTCTCAAAATTCGATCTTAAATCCGGATTTTGGCAACTTGGTGTTCATCCTGACGAAAGATACAAGACTGCTTTCTGTCTCCCAAATCGTCATCTTCAGTGGAATGTGTTACCGTTCGGCCTCAAGACCGCACCATCTCTGTTTCAACAAGCGATGCTTCGTATATTCAAGCCTCTACTTCACACAGCCTTGATATATATCGACGATATCATGTTATTTTCGTCAAACGAAAAGGATCACGTTCAACTCCTTCAACAATTCCAGAGTATTGTGAAGAAATTCGGAGTTATGCTCTCGGCCCGTAAGATGGTCATAGCCCAGCCCAACAACGATTTTCTTGGAATGCGAATTAAAGAAGGCAACTTCTCACCACAGGCACATCTTGCCACAACGCTCCTCGATTTCCCTGACGAAAATCTCACGAAGCGACAAATTCAGCAATTCCTTGGTGTAATCAATTATGTGAGTGACTTTATCCCGCGCCTGACGAGACCACTACAGAAAATGCTGACAAAGAATCCACCACAGTGGGCAAACCGACAAACTGAGGCGGTCAAAAGCCTAAAACTAGAGGTTCAGAAGCTACCACCTTTAAAGATTCCTTCCACAGGCACGCGCATACTGCAGACTGACGCGAGTGACAAATATTGGGGAGCCATTTTATTTGAAGAAATAAATGGAAAAGTCAAATCTGTGGATACAAAAGCGGACGCTTTAAAGAATCCGAAATGCATTATCACTCCACGTTCAGAGATATATAGCAGTCAAGAAGCTATCGAGAAGTTCAGTTTCATCTGATAGGACATAAATTTCGAATCGAAATGGATATGTCATCTTTTCCAAAGATGTTACAATTCTGGCAAATCGTCTCTCCAAAAAAACAGAAGGAATTGGTGGTAACCCACCCACATCAGATTATTAGATGGAGGAGTGGTTTTAAGTACGATTTGAACTCCGGTCTATTTACAGGCTCAAGAACACCTAGTTACGAGATGCTCAGTAGAGAATCCCAAAGAAAACATCATTGATGGCAAGGCTCTTCGCATAGAGTTACTATAATTTCACTCAACATGCCTGAAGAACCCAGAGAGCTCATCAACGAAAATCTCTAACACCACTCTCGCAACCAGATCTTCGCTACCAATCAATCATTCTGATCCAAGTATAACTCCGACAACCACTTATGCATCCAACCTAGGGATTCCATCCGACTATCCGATTGCACATCCTCTACAGAATCGAGACGCCTACATGCCTGAGGAAGTTCTCTGTTTCCTCTGGTACCTCTGCGCAAGCTACACTATAGGTATTACCTTTGATATTTCATGGTTATACCAATACATCAATGAGCAGTTCACCAAACGACAGCTAGGAAACAAAGAGTGCCTATCAACGTTCTTAACCTGGTTCGCACCACTCACCACTTGGAATGGTAAACTACGCAAGTCAGCCAAAGCAACAGGCTTGTCATTCAAGAAGTTGAAGACTCAAGGAGGTCCCAACCCGTTCTTCAATCCACACACCACATACTTCTTTCATCGCCCTGTTCAGGTAAACGACAAAACAGGAAAGGTCCATGCCCTACCAACTCTCATCCATCACAAAGACTACCAGCGAGGAGTCCGGCCAGACTTCAATCTAAATGACATCAAGCTATACGAAGACTTCCAGATCCATGCGTTCCGTCTAAGGTGCCACCCAGATGTTCCCAATCCCGTTTGTTCCAAATTGGATATACTACCAATCGATTATCAAATGGAGCTCGATGAAGATCTTCAGTTCTTCATGGAGAAACCTCTCGGAACGCCATATATTCCGACGACATCTCAGACAATCAAACAAGAACAACAGCAGCCAGAATGCCCGCCGGAATATTTTCAGGATGCACAAAACCCTAATGACGATGCAATGAACATCGACGAGATTGGAGAATGTTCAACATCGAAGAAAACAACAGTCCACGTAAGTCTTTCGAACTACCAGAAGAAGAGTACGAATGCCCAGATGATCACTATGGATGCTGCGAGAAACACATTATCGAGTTCGAGATAGACCACTGATAAGCAGCATTCTAAGTATGTTTAATTATGTAAAATAAGTGTGTTTTATAAAATAAGAATAATGATGTATGCATTACGTAAGCGATGATGTAATCGCATATGTATAACGCATGATGTAAGCGATGATGTAATCGCTATAATGGCTGAGGTAAGCGCTTATGTGAGCGACTTATCCTCCCGCTAAAAATGTCGGTGACCCCATTGTGAG

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6539

Start:

9830861  

End:

9837399

Strand:

-

>A05_LTR-Caulimovirus_44

GAGTCTTATTGACGGATTGAAGGGTTCGGCGATTTTCCAGGTAAAGGGAGCGATACAGGCACCTCTACGGCCTTTAGATCTAGCTCAACCACTGTTAGGAAAATCTCCTAGCCCCGCTAAAAGTCGTGTTGACAAAGTCGTGTTGATCGAATCGCCGATCTAAGTTACTGCATGTTTTTGGATCTTCGTCTTGCAAATGGGAGATAGGAATCAGAGCTTCTCAAAGATGAGATAAGATCTGGAAAACTAGAGAACTTTTAGAGAAACATAGAGAGAGAAACTTAGAGAGAGGTTTTTAGGAAATTATTTGATGATCTTTCACAATGGGGGTACACACATATTTATAGGGGAGGATAAGTCGCTGACATAAGCGCTACCTCAGCATTACAGCGATTACATCATCTACATCACGCTTACATGGATTACATAGCTTATAATGCACATCATTATTCTTTATTTTATAAAACACACTTATTTTACATAATTAAACATACTTAGAGTATGCTGCTTACTTCAGTGGTCTATCTCGAACTCGATAATGTGTTTCTCGCAGCATCCATAGTGATCATCTGGGCATTCGTACTCTTCTTCTGGTAGTTCGAAAGACTTACGTGGACTGTTGTTTTCTTCAATGTTGAACATTCCTTCCAATCTCGTCGATGTTCATTGCATCGTCATTAGGGTTTTGCGCATCCTGAAAAGTATTCCGGCGGGCATTCTGGCTGTTGTTGTTCTTGTTTGATTGTCTGAGATGTTGTGGAATATATGGCGTTCCAAGAGGTTTCTCCATGAAGAACTGAAGATCTTCATCGAGCTCCATTTGATAATCGATTGGATAGTATATCCAATTTGGAACAAACGGGATTGGGAACATCTGGGTGGCACCGTTAAGACGGAACGCATGGATCTGGAAGTCTTCGTATAGCTTGATGTCATTTAGATTGAAGTCTGGCCGGACTCCTCGCTGGTAGTCTTTGTGATGGATGAGAGTTGTAGGCATGACCTTTTCTGTTTGTCTTTACCTGAAAGGGCATGAAAGAAGTATGTGGTGTGTGGATTGAAGAACGGGTTGGGACCTCCTTGAGTCTTCAACTTCTTGAAGGACAAGCCTGTTGCTTTGGCTGACTTGCGTAGTTTACCATTCCAAGTGGTGAGTGGTGCGAACCAGGTTAAGAACGTTGATAGGCACTCTTTGTTTCCTAGCTGTCGTTTGGTGAACTGCTCATTGATGTATGGTACAACCATGAAATATCAAAAGTAGATACCATGTGTAGTAGCGCAGAAGGTACAGAGAGAAACAGAGGACTTCTTCATGGCATGTTGGCGTCTCGATTCTGTAGAGTGTGCGAATGGAAGTCAGGATGGAATCCCAAGGTTGGAGTTATAGTGGTTGTCCGGGTTCCGATATTCGAAGAATGATTGACTGGTAGCTGAAAATCTTGTTGCTGAGAGTGGTTAGCAGTATGTTTCGTTGATGAGCTCCTCGGGCGTACTTCAGGCATGTTGGAGGTGAAATTATAGTAACTCTTTGCAGAAGAAGCTTCCATATGTGTATTTCTTTTGGAGGATTCTACTGAGCATGTAAGCTAGAGTGTTCTTCGAGCCCTATTAAATAGACGGATTCAAAATCGTACTTCGAAAACCATTCGCTCCACTCAATAATTGTTGGTGTGGGACCATCTTTTGCTTAGAATTGTAACATCTTTGGAAAAGATGACATATCAATTTCGATTCGTAAATTTATGTCCTATCAGATGAAACTGGAACTTCTCAATAGCCTTTCTTGACTGTCAATATCTCTTGAACGTGGAGTGATAATGCATTTCAGATCTTTGAAAGCGTCCGCTTTTGTATCCACAGATTTGACCGTTTCCCATTTATTTCTTCAAATAAAATGGCTCCCCAATTTGTCACTCGCATCAGTCTGCATAATGCCGTCCTGTGGAAGGAATCTTTAAAGGTCGGTAGCTTCTGACCTCTAGTTTTAGGCTTTTGACCGCCTCAGTTTGTCGGTTTGCCCACTGTGGTGGATTCTTTGTCAGCATTTTCTGTAGTGGTCTCGTCAGGCGCGGGATAAAGTCACTCACATAATTGATTACACCAAGGAATTGCTGAATTTGTCGCTTCGTGAGATTTTCGTCAGGGAAATCGAGGAGCGTTGTGGCAAGATGTGCCTGTGGTGAGAAGTTGCCTTCTTTAATTCGCATTCCAAGAAAATCGTTGTTGGGCTGGGCTATGACCATCTTACGGGCCGAGAGCATAACTCCGAATTTCTTCACAATACTCTGGAATTGTTGAAGGAGTTGAACGTGATCCTTTTCGTTTGACGAAAATAACATGATATCGTCGATATATATCAAGGCTGTGTGAAGTAGAGGCTTGAATATACGAAGCATCGCTTGTTGAAACAGAGATGGTGCGGTCTTGAGGCCGAACGGTAACACATTCCACTGAAGATGACGATTTGGGAGACAGAAAGCAGTCTTGTATCTTTCGTCAGGATGAACACCAAGTTGCCAAAATCCGGATTTAAGATCAACTTTTGAAATATGTTGCTCCTTGCAAATGTTGGAGAAGTGCCTTTTTGTATTCGGAGGGAATCTTGAAGTCTTGAGAATTTTTAGTGGCTTTAGTCAATTAGTAGCCTGAGTTTTCCTCTTGCTTGTTCTGCACGGTTGTTGACGTAGAATGCTTTGCACGCCCATGGGGAATTTGTCGCTGAGACTATTCATTGGGTTACCAATTGGCCGCATTCATCGTTTGCTTGATCCAGTAGAGTTGGTGGCATTCCAGCATGACTCGCTTTAGTTGGTGTGGTGAGAACATTCTCCTTGAATGACAGTGATACGAAGAATTCTGAATTTAGCCATAGGGGGTTGCTACATTTCTGGAGGAAATCTGTGTGTGATTCTGCACACGATGTTGTAGTCATCTCTTCTTTGATCTTCATGAATTCTTGAGAAATTTTTTCTTCTATTGTGAAGAGACATGGGATTGTTGTGAAAGCCTTGAAAGAGCCTTTCCATCTTAATCCTCGTAACTCAATTGAAATATCATAAGCCTTTTTGAAGGCGTGATATGAATCCCATCCCAGAATTAAATCTTTTCCTGGTGCTGTGGAACCAAGTACTTCAGTAGTGATGCAACATCCTGGGAAAATCTCGATCGTTATCGGTTTGGACTTGAGCTCTGATGGTTAATGATCCAGAGTTTGCAACACGGAACTCCTGTTGATGAGGTAGCCACATAGATGGAGAGTAAGATTTTTGGATTTAGTATAGTGGTGTGAGCTCCTGTGTCTATGAATGCAATACATGAACCGGATCTTCTTCTACAAGATGGATCGAGGATGGTTACTGGCAGATGTGGAGTCTTTATCTCGTCTTGTTTTGGCATTTTTGTAATTTTGAAGCAACAGTCTTCTTCTTCATCTTGAGATGATTCGGATGAATCGTCATAATCTGAGTAGCCACATATAGCGTCGTTGTCGTCGCTGTCATAGGATAGAACAGACTCTAAATCATGGCCTTCGAGATCTATGTCAGGTGCGATCTCCGAGATTGAATTGATCAGATATTGCTTCTTCTTTGTGGACTTGTTTGGACAATTCTTTGCGTAATGTCCTTCTCTTCGACATAGAAATCATTTTGTTGACTTCTTGAAACTCCTTTTCTTTCGGAAAAATCCTTTACGTCTGAATTTGGAGGAATGCTTAGAGAGACGCTTCTTGAATTTTCGTCGCTTCTCATGATTGTCGCAAGAACACGATTTCTTGGACTTTGAACACTTGATTGATAGATCTGGTCTTGCACATATCTTCGTTAATTGTTTCGATCTATCCATGAATTCCATCCAGAACTCCTTTTGTTTGCAGAGCTTATCGAGCGTTCTGAAAACGTACTGTTGGATCTGACCGATGGAAATTTCTTCGACGGTTTGACCTTGATCTCTGATGTACAGCTTAGTCTGCTGACTAAGATAGTCATCGATGGAAGAGAGATAGATGTGCTTGAGGCTTGGATTGTTGAGGCCGTTGAGAGCGTAATATCTTCGTGTCTGCCTTTCAAAATGTTTAGCGAGATCCTTCTTTTGTAGAGAGCAACATTTTGCAGAGAAGAACTCTTCTTGTATCTGTTCTTTTTGGTGCGTGGGAGTACCGATAAATTCTCTGTGAATTTCTCCGAGAAGTAACGGTATTGTTGTTTGATAGACTTGATGTTGTCTATATTCTCCGAGTGAGTTCCACCATTCTTTGAGTGCTCCAGATAGTCTTGCAGTGAATTGCTGAATTACCAAATGCAGTGGGGATGTGATGGCTTCAGAACTCATCCATGCATGGAATTCATCTAGACGATCATTCCATTTGTTGAAAGGAATGTCATCAAATGTGAAGACCATAACCTTCGAAGAAAAATGCCTATTGGGCATTTCTTGTTGAGTAGGCTCAAAATTCATTTCGTCACCGCTTGAGTTGATTTCATTGATGTTTGGCTCTTGTTTAGGAGTGTTGGAAGTTTCACCAATCGTAAATTGCTTCGGCAGTGATTCGTCCTCAGATTCGCTTGTGTATTCGTCAGAGCTTGTGTCTGAGAGATGTTTGATTTTTGCAACTTCTTTTGAGGACTGAGGGTCCTTTTGTGCTGACTGTAATTGATTAGTCATCATTGCTGAGGAATCACCAAGGGTGTTGAGGAGACTTGTCATCGAGAATTCGATAATTCCGATGTCGTGTCCCTTCTTCTTTTCGTCGACTGAATCGTGACTAGAAGATGACGTTAGAGCTGGAGTTGGAGCTTGTTTCTTGAATGGGTTGTCTTGGAATTCCGAGTCCTTTTGGCGTCGGGATTTTGATCGGACTGGTTTAGTCTTTGGATATGCAGCTGAAGTTGAGCCATAACGAGACGTAAAGATTTCATCAGAGGACAGAAAACCCGGTAGTGGATTTCTTGATTTTGGGGTTTTATATCCTGATAGAAATCCAGGAGAGTAGGATCCTTGATACGTCGGTATTGAGGCACTTTCAAGAGGATTGAAATATTCAGATCGTCGTTGATTGCGAACCATGCTCTCGAGGCTACTTTGGAGATCTTTCAGCTGATTGTTTAGACTAGCCGTCTCTGCTTCTTTGCTGCGGAATTGATTAGTATCTACCATCATGTGTTTCGCCATAGACATCATTTCTTGATGGAGATTGTTAAGCCGACCATGTATTTCTGTGATGGCTCCTTGGAGGCTTTGGAACCTCTTATTATAGCTATTTGCTAGTTGATCAACCTTATTATTGATTGTTGATAATAGCCTATTTTGGGCGAGGGAGTTCTCGGTTTGCCAATTGAGTACTTTTTCTGCTTGACTCATCTCGTTGGGACCCGAAGGATTGATGGCTTGTGAGAGAATCTTTGGACAATGAGCGATGTTGTCCTTGATGAAGTCTTCTTGAGGAGGAAAGTCGTTGGGATCTATCATCATGATTTGTTGTTAAGTTTATTCTTTTTGGCTAGAGTATTCGACTATGAAGTCGTACTTGTCATCTCCAAGTGGACCAACAGTAGGATCTCCTTCTAGGTACCTTTTGTAGAGAGGGTCTTTTTTCTTTCGTCTCCGCCTTCGTTTTTCATTATCGGATTCATCGTAAGTTTCTGAACAGGCGGTGCAGTTGCAGACGTCAAAGCGGCAATGTCCGTCTTCATCAATAAAAGGATAGATTATTCTTCCATCTTTGTCAAATCGACAAGGTTTCGGGATGTCTTGTTTTTGTGCTGGGCCGTGGAAGTCTTCTTCATCGACTTGGATGGTGAATTGTGTGAACAATTGTTTTCTGAAGGACGACGATCTTGGCTTTTCAAATTTGATCTCCGTCGTTCCATCCTTTTGGGAGTGAAAGCTGATTTCTGAGGATTGTATAGGCGATTGGGTAGCTTGATGAAGCTTCTCATAACTTGTCACCCATGATTCTGGCAATCGTTTGAGTAGTTCTTCGCGAGAGATCTGCCGAGAGATTTGTATTGAGCTAGACGCTTGAGATGCTGATGAGACTTCGAGGTATAGTGCTTCATCTGATGAGGGCAGAACAAGATCAAGAGTGTGATCTTGAATTCTGTAAACAATTTGGTGATGTAGCGTGGCTACTACAGTCTTCTCTTGCATAGGTGCTCCGATTAGTGAAGCTGAACCTTGAGCGTCTTCAACAGATTTGGATCTTGCAATGAGACATTAAAGTTTGGAAACAGTGTAACGAATACTGTCCCTGCATTTAATGTTGTTTGAACTGTTCCGATGCAAGCCTGCTGGTATGACTTTAATCGGGAGTCTATCAACGCAATTCGGGCTATGACAGGTAGACCTTTTCTAGCATGTAAGGTCAAGCCAATTCTTACTACACCAAAATGAAGGTGAGTATAGCCTTGCTGCTGCCACAATCTGGGTAAGTTCTCCGGGATGTTCAAAGAAATGAACTGCTCTTCTTCGGTGGCTGGAACTTGACAGGACGAGAATCTGCTGGATTGGACATACTCCATCACCTTTCGGCTGGAAGATGG

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

277

Start:

9837404  

End:

9837680

Strand:

-

>A05_LTR-Caulimovirus_45

ATGAGCTCGCGAACTCCTTTGACGGAGAAGGCACTGGATTTTTTTGCGAAGTATTCATATGGGTTTACTAGGGGAAGGGTAGTTTCGGGTAATTGGTCGTCTGGAACATATTCAATTTCATATAGGGAATTTATATTAGAAGATGATGAACGGCTTTTATTTCTGGGTAAGGTTGAAATAGCAAAAGGAGAATCAATTGAAGTAGGATTTGAGGTAGACATCATGAGGAAATTGTTTTCCAGATTTCTTAAATCAATCAGTGATAAACAATGATTTT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

877

Start:

11482193  

End:

11483069

Strand:

+

>A05_LTR-Caulimovirus_46

AAGGAAAAAAATTCAAACTTAAATAAACTATTTGAGAAAGAAATTTATTCGGATTTACCAACTGCTTTTTGAAATCGAAAACAACATATTGTTGATTTACCTTATGATGAAAATTTTCTTGAAAATGAGATTCCCACAAAAGCTCGTCCAATTCAAATGAACTCAGATTTAGAAAAACATTGTAGAAAAAAAAATTCAGATCTTCTAGAAAAATGATTAATTTCAAAATCAAGATCCCCTAGGTCTCGTGCTGCTTTTTATGTAAATAAAAATTCTGAAATTGAAAGAAGAACCCCAAGATTAGTAATTAATTACAAACCTTTAAACACTGCTTTAAAAGTCGATTAGATATCCAATACCAAATAAAAGTATTTACTTCAAAGACTTTACTCAGCCCCCATATTCTCAAAGTTCGATCTAAAATCAGGATTTTGGCAAATTCAGATATCTGGAAATAATCGTTATAAAATAGCATTTACAGTCCCTTTTGGTAAGTACCAATGGAATGTAATGCCATTTGGTTTAAAAAATGCACCTTCTGAGTTTCAAAGAATCATGAATGATATATTCTCTAATTATTCTAAATTTTGCATTGTTTACATTGATGATATACTACTATTTTCACATTCAATTGATGAACCTTTCAAAAATCTCAAAATATTTTATTACGTTGCAAGAAAAAATGGTCTTGTTGTTTCCAAAACAAAAAATGTCTCTATTTCAAACTAAGATCAAAGTTTTAGGTCACTACATATCACAAGGTATGATAACCCCTATTGAAAGATCTTTAGAATTTGCAAATAAATTTCCAGACAAAATTATTGATAAAACTCAATTACAAAGGTTCCTTGGAGATCTCATTTATGTTTTGGATTTC

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

333

Start:

11495050  

End:

11495382

Strand:

+

>A05_LTR-Caulimovirus_47

AGTTTTAACATTTGCATAATGGTATCAAAGTCTACATGCTTGCGTTATGGTTGATAGAATCATTGTTTATAACTGATTGTTTTAAAAATCCTCGAAAACAGCTCTTTCATAAAATATCTACTTTCCATCCTTCATCCACTGATTCTCGGTTTACAATTTTCACTCTTCCTAAAAGTAAAAACCCTTCTTCCTCCTCTAATATTTATTTCTTATATATATGAAATCATGTTACGAGATCAACTACCTGAAACTATCCTTCCTCTGATAAATTCATACGAATAATTTACAAAAAAAGTCTAGCACCTTTTTGGTCAAGGACGTTCGTGAACTCAT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

133

Start:

11495390  

End:

11495522

Strand:

+

>A05_LTR-Caulimovirus_48

TCCTCTAACCAAAAAGTAATGGAGTATATCCAGTCCAAAAGATTCTCATCCTGCCAAGTTCCAGCCACATAACAGTTTATCTCTCTGAATATCCGGGAGAACCTACCTAGATTGTGGCAGCAACATGGTTATA

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

476

Start:

11495515  

End:

11495990

Strand:

-

>A05_LTR-Caulimovirus_49

TGGTTATAAGATCAAGAGTATGATCTTGAATTCGGTAGACGATCTTGTGATATAGGGTAGCTACTACACTTTTTTCTTGCATAGGTGCTCCGATTAGTCGAAGCTGAACCTTGAGCGTCTTTAAGAGATTTAGGTCTTGTAACAAAACATTAAAGTTTGGAAACAATGTTATGAATACCATTCCTGCATTTAATGTCGTTTGAACCGTTCCGATGCAAGCTTGTTGATATGACTTTAATCAAGAGTCGATTAAGTCTATTTCGGGCTATGAATGGTAGTTCTTTTCTTGCATATAAGGTCAAACCAATTCTTACTACACCAAAGTGAAGGTGAGTATAACCATATTGCTGCCACAATCTAGGTAGGTTCTCCGGGATGTTCAGAGAGATAAATTGTTCTTCTTCCGTGGTTAGAACTTGGCAGGATGAGAACTTGTTAGGCTGGACATACTCCATTACTTTCCGGTTGGAAGACGG

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

201

Start:

12046110  

End:

12046310

Strand:

+

>A05_LTR-Caulimovirus_50

GCTTTACAAAGGCATAGAGAAAAAAACTTTAAATATATTCATATTGGCTTGGTTCAAGTCGGCATAAAACCTCTTTCAAAAGAAGGGTTAAATACTTCAATATTAGCTATTTTAAGAGATACACGATTTAAAGTATTTGAAGATTCTTTGTTAAGCTCGGTTGAATCTAGTTTATGTACTGGACCAATTTCATTTGATTGC

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

281

Start:

12046970  

End:

12047250

Strand:

+

>A05_LTR-Caulimovirus_51

CAAAATCTGAGCCAACAAGTCCAACTTCTCTGCCATTACAGATAATCATGTTAAATGAATTAAATGTTTTAGAAAAAGATTTTCGATTGACAAAGAAGTTTTTAAGAGATGATTTCTACTTCTAAAAATAATAGTCAAAAAGGCTTTGGTTCTTCAAAATTTTTAAAAGAAAGAAATAACATTCAGAATGAATTTTATGATTATCTTCAAACACATAAGGTACAAATTTTATTTTTTAATTGGTTTGAAGATTATGCTTCTAAGAACAATATAAAATTTCC

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

117

Start:

12048281  

End:

12048397

Strand:

+

>A05_LTR-Caulimovirus_52

AAAACTAAGTGATTTCCAATGGTACAAAAACACATTTCTTACTAGAGTCTTACTCCGTCAGGATTCTAACCAACCTTTTTGGAAAGAAAAATTCCTAGCTGGCCTTCCTACTCTCTT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

848

Start:

12050005  

End:

12050852

Strand:

+

>A05_LTR-Caulimovirus_53

AAATTTGTTCAGATTTACCAACTGCTTTTTGGAATCGAAAACAACATATTGTTGATTTACCCTATGATGAAAATTTTCTTGAAAAAGAGATTCCCACAAAAGCTCGTCCAATTCAAATGAACTCAGAATTAGAAAAACATTGTAGAAAAGAAATTTCGGATCTTCTAGAAAAAGGACTAATTTCAAAATCAAGATCTCCTTGGTCTTGTGCTGCTTTTTATGTAAATAAAAATTCTGAAATTGAAAAAGGAACCCCAAGATTAGTAATTAATTACAAACCTTTAAACACTGCTTTAAAATGGATTAGATATCCAATACCAAATAAAAAAGATTTACCTCAAAGACTTTACTCTGTCCACATATTCTCAAAGTTTGATCTAAAATCAAGATTTTGGCAAATTCAGATATCTGAGAATGATCGTTATAAAACAGCATTTACAGTCCCTTTTGGTCAGTACCAATTGAATGTAATGCCATTTGGTTTAAAAATGCACCTTCTGAATTTCAAAGAATCATGAATGATATATTCTCTGATTATTCAAAATTTTGTATTATCTACATTGATGATATACTAATATTTTCACATTCTATTACATTCTATTGATGAACATTTCAAAAATCTCAAAACATTCTATTACGTTGCTAGAAAGAATGGTCTTGTTGTTTCAAAAACAAAAATGTCCCTATTTCAAACAAAGATCAGATTTTTAGGTCATTACATATCACAAGGTATGATAATCCCTATTAAAAATCTTTAGAATTTGAAGTAAATTCCCAGATAAAATTATTGATAAAACTCAATTACAAAGGTTCCTTGGAAGTCTCAATTATGTTTTAGATTTCTTTCC

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2308

Start:

12234566  

End:

12236873

Strand:

+

>A05_LTR-Caulimovirus_54

GTTTTCAAAACAAAGTTTTCGTGAACTCAGACTAATTTAAACCCCTTTAGGAAGATTCTTACCTTTCTGCAAAAAAATTGTTACTGTAGGTGTTCCAAGCAGAAATACCTGAAAGAGAAGTAAGACCGTTGGCAAGCCACAATCATGTCATCGTAAAATTGGTTAGTATCCTCCTAGTATGAGTTTAAATTTAAAATAAGTCATGTCATCCTCGTTTAGAAAACTCTTTAACCAAAACATGCATCAACTTCTGCATCATATACAATAATTAATTCAAGAGAAATTATGTTAAAATAAAATTTAATCAAGAAATAACAAAATATCATCTACCTCATATCCAGCCAGAACACATATATCAAACTGGAAATCTTTAAAACAGCTTATTAAATAAAAGAACATGAGCAAACCCCATATCTTCGAAATGAATTTGAAGAAATTAAACTATTATTTTCACTCGCTTTAGTCAAATACATGCAAAAAGGATTCAATTATATGTGTATTTTGATTTAATACAAATTGATAACCTTTATCAAGAACCAGAATTAGATTCACCAATACTTATGTTATTAAGAGATAAAACTTTGTTAAAGTTTGAAGATTCGCTCATTGTAGCAATGCTATCTATTTTTTACAACGGGGTAGTCTATTTTAATTGCGCTCCTACTTTTCAAGTAAGCTTATATGATCCAACTATACTCAAACTCTAACATTAAATCTTCATTTACCAGAAATTAAATTCCAAAATGAACGACATAGATATTTGTTACTCTTATCGAATTTATTTTAAACTTCAACTTTTGAATTTAAACCCAAGATGTTTATCACAAGAAGATAAAGGAGAAACAACAATTTTATCTGTTCATAGTAAAGATGATTCAACAACTACATACTACATGTACACAATTAAAAAGGGATGAAATAACTATTCCAGATCAATGGAAATTTGAAATTACTCAACCTCCTGGAAAGTTTGAAAAAACAAATATTTCAAAAATAATTGAACGAATGGATAGAAAAATATTACTACAATTAGGGTCATATATAAAATCTACTTCTACCCATAGTTAGTTCATATCATTCATGAGCTTCCATTTCAGAATATCGTACCGATCAATTTAGTGCAGATTCGAAAACAGAAAATGTAAACCAAAGTATTTGACAAGAAAATTAAATTAAATTTAAAGTACCCATAGATGAACCTGAACAAGGTATGTATCTACACCAATACATTTAAATATTTAAATGTCATAACAATAAATTTGAAATTGACCTACAATATATCAAAGACAACTTTTATTCAAAAGAAAATGAAGAAAAACATAACTGGTATTTCAAAACATTCTCTAATCAGAAAACTACTTAATTTAGAGAAAATTTATAGTTGCATAATATTAAAATAAATATATATTCCATTTTACATCATTTTAAACATATTTAATCACACATAATATCAATTCTCTATTTAAAATTAATACAAGTTCATCTCTCAGTCAAATATGGGAACAAGTAGATGTTAATAATATTAAATCAATTCATCCACCACTAAAATATTTAAAATAAATACTTTAAATCGACAAATAATAGCCACACCTTTAAAAACCAGAGCTAATAAATATGATAAAGACTCTGTAATTCTACAAGATATTAAATCATATATTAACAAAATAATTACCAAAGTAAATTATTATATACAATTTCTAAACAATTAGAAAACACAGAAAATAAAATAAATGCCAATTAAAATAACAACTGGATCAATTTAACCAAAGTAATCAACATTCATTTTCATTTGTAACCATACCAATCTTTAAGCCGATAACTAGACAAATCAAATTTCCTGAGAATGAAATTTTAAATCAATTTCTACTAGATTAGATAAATTAAACAAAAATAAATAAATGAATATTATAGATGCAGATGATAATGATTCTATTCAAACATCCTCACAATCAGAAAAAAATAATCAAGAAACTAATTGAACAAAAAATAAAATCTATAAGATGTTATTATCGACGACATACTCCACCTAATCTATTATTTTTAAAATACCATAAATATACTAATAATTTTTAAACTGGAGATGATATGTATGAATGGAATATTGATGGACGTTGAGAATATAAAATAATGAATTTAATTCAAGAAACGAGGAAGGCCGCTATAACATTTATTGTTAGAGATAATTCTAATAAACAAGCATATGTTATACTAGTAACATGATATAATGAAGCATTAAACAATTGGTGCGATAATTCACTAGATACAGGTATCCAAAATTCAATAATAAACCATGTTGAAATAAGAAGAA

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

239

Start:

12237559  

End:

12237797

Strand:

+

>A05_LTR-Caulimovirus_55

TAAAATACACAGATGACAAAAAAAACTAATCAAATATTATTCAAAGAAGAAAAAAATATAAACCAATAAATGCATAAAAATTAGTCCGTTAAAACTGTAAAAGAGCTGGACATAGATTCACATAATGCAAGATGAAAAAGAAAATAAACGAAATATTCCAAAATCAACCAGATATTCAAGAAATAAAAACTAAATTATTAATATTAGAATTTGAATTATCAGAAGATACTGATAGTGAT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

280

Start:

15094445  

End:

15094724

Strand:

+

>A05_LTR-Caulimovirus_56

ATCAAAGAAGAAACTGCCAAAATATCATGTGCCGATTCTCACTCGGAATTTCTCACCAAATGCTTTTTACCTCTTTGGAAAAATGAAGACTTCTTTGTATCCGTACCATAAGAAAAATGAAGACATCAACCCAACAAAGGCAAGCCACCCAAGCATGGATCCAGATCACTGCAATCTCGCACTTGAAGAAGTTGATAAACTGCTGAATGAAGATCTCATTGAGAAGACCACTTCACCATGGGCATGTGAAGCTTTTATGTCAACAAAATAACAGAGCAAG

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1202

Start:

15095697  

End:

15096898

Strand:

+

>A05_LTR-Caulimovirus_57

GACATCATGTGTTGCTTCTCACTCAAAATTCCTTACCGAATGTCCTTCACCTCTTTGGAAAAATCCAGACTTCTTCTTATCTTTGCGCTTCAAGAAGAATGAAGACATCAAACCAAAAAAAGGCAAGCCACCCATGCATGAATCCATATCACAACAATCTTGCACTTGAAGAAGTTGATCAACTACTGAAAGAAGATCTCATTGAGCTTTTTATGTCAACAAAAGAGCAAAGCATATTCGAGGAAAACTGAGACTGGTCATCAACTATCAACCACTAAATAACTTTCTTGCAGATGACAAGTTTCTTTTACCAAAATGAGAAATATTTTTCCAAAGATTACCCCAGACAAAAGTATTCTCCAAATTTTGTTTAAAAGCGAATTGTTGGCAGTTAGGAATCAAACTAGAAGACAAGCATAAGACATGTTTCGATGACCGCTATTACCACTGGAAGGTCATGATATTTGGTCTAAAGATAGCCCTTTCACTATTCCAGAAGGCCATGATCAAGATGTTTGAGCCAATCCTCTCAAATGCCTTAGTATATATTGACGACATTCTGATTTTTCTCTAGACATTGACTCTCATACTCGCCTACTAAAAATATTTCATGATATCATACAACAATATGGTATCATGCTCTTGGAAAAGAAAATGGTCATTTCCTTGGCATGCATATTTCAGAGTGTCACTCAGCCCCACATTGCAATACAACTTAGTGAGTTTCCAGATAAAAAGTTGTCTTTCAAACAAATTTAGTAATTCCTTGGAATTGTTAACTACATGACGAACTTCATACATCATCTCGCAAAACCTTGGTAAATCCTTTCAGCTAAACTTAAAAAGGACGCTCCTCCATGGAATCAGAAGTATACTGAAGCAGTGAAAAAACTCAAGAAGATTTCAAAGACACTTCCATCACTAAAAATACTATCCAATGGTAAAAGAATCCTTCAAATGGATGCCAGTGATTGCTATTGGGGTGTTGTCCTACTAGAAGAAGATGAAAAAGGAAACAACACATTTGTGGTTATAAGAGTGGTGTTTTCAAAGAAGAATAAAAACACTATCACTCCAAGTACAAAGAAATTCTTGAAATAAAAAGAAGAAATGAAAAGTTTGAATTTCATCGGGCGAACCATCATTTTCTTATTGAAATGGACATGTCATCTTTTCCAAAGATAATGCATTTCAAACTGAAG

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

314

Start:

18027524  

End:

18027837

Strand:

+

>A05_LTR-Caulimovirus_58

TATCAAGGAACAATCACACCTATTTCAAGATCAATTGAATTCGCAGATAAATTTCCTGACGAATTAAGAGAAAAGACCCAGTTACAAAGATTTTTAGGATGTCTAAACTATGTTTCAGACTTCTTACCCAATCTTAGGAAAACAATTCAACCATTATTTCAACGGTTACAAAATAATCCAAAACCATGGACTAATCAACATACCCTTTTAGTCAAACAAGTTAAGCAAAAGGTTAAAACTCTTCCATGCCTTTCCATACCAAATCCTGAAGCTGACATGATAGTTGAAACTGATGCTTCAGAAATAGGTTATGG

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

600

Start:

19709561  

End:

19710160

Strand:

+

>A05_LTR-Caulimovirus_59

AGGTGTTCCAGGCAGCAAGTCCTAAAAAATGCAGTAAGCCCGTTTGAAGCCGCAATTGTGTCGACATAGAACAGGTTAGTATTCCTTTGGTATGAGTTCTAGTTTAGATTAAGTCATGGCGTCTTCGTTTAGGAAACTTTTAAATCAAAACATGCATCAACTTCTGCATCATATGCAACAATTAATTCAAGAGAAATTATGTCAAAAGTAACATCTTTTAATCAAGAAATATCAAAAGATCAGTTACCCCATATCAACCCAGAACATATATATCAAATAGGAACTTTTGATTTTAAAACTCCTTATTAAATAAAAGAACATGAGAAAACTTATCTTTTCAAAACGAATTTGAAGAAATTAAACTATTATCATCAATAGCTTTAGATAAATATAGACACAAAGGATTTAATTAAGTCCATTTTGGTCTAACACAAATTTATATAAAAAAAATAATAAGAACTGGAATATATTCACCAATACTTATGTTACTAAGAGATAAAACTCTACTAAAATTTGAAGACTCGCTTGTCGGAGCAGTTCAATCCAATTTATGCAATGGACAGTATATTTTAATTGTGCTCCTAATTTCCAAGTAAGTTT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1488

Start:

19710592  

End:

19712079

Strand:

+

>A05_LTR-Caulimovirus_60

AATTTAAATTTCAAAATGAAAGATATGAATATTTATTACTCTACCGAGTCTAATTTAAACAATCAACTTCAGAATTTAATCCAAGATGTTTATTACAAGATAATAAAGGAGAAACAACAATTTTAGCCGTCATAGTAAATATACTCCAACAGACACACACACACACACCTAAACAATTAAAATGTGATGAAATAACTATTCCAGATCAATGAAAAATTGAAATTACTCAACGCCTAAAAGTTTTGAACAACAAAAATATTTCAAAAATAATTGACCAAAGAGACTGAAATATATTATTACAATTCGGATCTTATAGAGATCCACTTCCACCTAGACTTAGTTCATATAATTCAAGAGCCTTTTCTGAATATTGTACTGGTCAATCTAATGCAGATTTGGAAACAGAAAGTGTAAACCAAAATATTAGACAAGACAATTCAATTAGATTTAAAGCACCCGTAGCTGAACCGAAACAAAATATATATCCAGTTTTTCCTACACCATCAAATTTTAATCAATAAATGTCATAAAAATATTAAATTGATAAGCAATATATTAAAGAATGCTTTTTTTCAAAAGAAAACAAGAAAAACGTAACTGGTATTTTAAAACACTTTTTAAACAACAAAATATTGAATTTAGAGAAAATGGTATAATTGTATGATATTAAAAAAAACAAATATTCTGTTTTTATATGGTTTGAAACTTATACAATCACACATAATATCAAATATCCATTTAGAACAATAAATTAATAAAATTGAATTAATTCATACACCATTAAAATATTTAAAAATAAATACATCAAATCGACAAATAATAGCCATAAGTTTTAAAAAATGAGCCGATAAAGGTGATAGAGACCCGGTAGTCTTACAAGATATTAAAGTAATATATCAACAAAATAATAATCTAAACTATTTATTGTACACAATTTATAAACAAATAGACAACATAGACAATAAACTAAATAATAATGAAAATAATAAAATAAATCAATTTAACCAAAATACTCAACATCCATTTTCATCTACAACTTCTCGAATCTTTAAACCGATAATAACTCAAATTAATTTTTCTGAGAATGAAATCCTAAAATCAGTTGCGACCAGATTAGATAAACTAGATAAAAATAAAGGAATAAATATAATAGACGAAAATGATAATAAATCTATCCAAACATCCTCACAGTCAGAAAATGATAGTCAAAAAATAAATCGAATAAAAAATAAAATAATGAGATCTAATAAACCTTATTATCAACAACATACTCCACCCGATCTACTATTTGAAGAACACCATAAATATTCTAATAATGTATATAATGGAGAAAATATATATGAATGGAATATTGATGGATGCTCAGAATCTGAAATAATGAATTTCAAAAAATGGGAATGGCCATGATAGCACTTAAAGCTAGAGGTATTACTGATAAACAAGCATATGTCATGTTAATATCTGGATTTAATGGAGCATTACAAAATT