ID Class Order Superfamily Length Start End Strand View
A04_LTR-Caulimovirus_21 RetrotransposonsLTRLTR-Caulimovirus187733114063313282-
A04_LTR-Caulimovirus_22 RetrotransposonsLTRLTR-Caulimovirus59833132843313881+
A04_LTR-Caulimovirus_23 RetrotransposonsLTRLTR-Caulimovirus83365119186512750-
A04_LTR-Caulimovirus_24 RetrotransposonsLTRLTR-Caulimovirus33396030919603423+
A04_LTR-Caulimovirus_25 RetrotransposonsLTRLTR-Caulimovirus173696034289605163+
A04_LTR-Caulimovirus_26 RetrotransposonsLTRLTR-Caulimovirus372696193409623065+
A04_LTR-Caulimovirus_27 RetrotransposonsLTRLTR-Caulimovirus13671190039911901765-
A04_LTR-Caulimovirus_28 RetrotransposonsLTRLTR-Caulimovirus3701190177011902139-
A04_LTR-Caulimovirus_29 RetrotransposonsLTRLTR-Caulimovirus26941190223511904928-
A04_LTR-Caulimovirus_30 RetrotransposonsLTRLTR-Caulimovirus20541190490611906959+
A04_LTR-Caulimovirus_31 RetrotransposonsLTRLTR-Caulimovirus8491190694911907797+
A04_LTR-Caulimovirus_32 RetrotransposonsLTRLTR-Caulimovirus13111190784311909153-
A04_LTR-Caulimovirus_33 RetrotransposonsLTRLTR-Caulimovirus3231190916111909483-
A04_LTR-Caulimovirus_34 RetrotransposonsLTRLTR-Caulimovirus1141190949111909604-
A04_LTR-Caulimovirus_35 RetrotransposonsLTRLTR-Caulimovirus4731190960011910072+
A04_LTR-Caulimovirus_36 RetrotransposonsLTRLTR-Caulimovirus3811191019011910570+
A04_LTR-Caulimovirus_37 RetrotransposonsLTRLTR-Caulimovirus6101191060711911216+
A04_LTR-Caulimovirus_38 RetrotransposonsLTRLTR-Caulimovirus3171191121711911533+
A05_LTR-Caulimovirus_39 RetrotransposonsLTRLTR-Caulimovirus37273646117364982+
A05_LTR-Caulimovirus_40 RetrotransposonsLTRLTR-Caulimovirus532273649877370308+

< 2 3 4 5 6 > Total 37


Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1877

Start:

3311406  

End:

3313282

Strand:

-

>A04_LTR-Caulimovirus_21

GGATTTGTTTGGGATATTTGGGTTGGGTTGGGTTGAGAAGAGGTATAGATTTGGATATAGTTTGGATTGCTGTTTTGGCTTGATTTGTAATTTGGAAATATTTTTGGATACCTGCAAGGGAACATCTGTCAAGGTTATATTTTTCCCACCATTTGACTCTGAATTCCCGGAGGAGAGAATAAGGCATGTCTTGGAGAGCGATAGCAAGGGTAAAATGCCATGAACATATCCATGGGATGCCCATGTCAATATGAAACCAAATTCTGTTTAGAGGCCCAACTGGTTGATCAAATACGTGTTTCTTGTAGAATGGGTAGGAGGTCTTGAGTACTTGGTCGGGGTAGATCGGATCTGCTGGTCCGTACCAGTACCACCATTCGTTGAACCATCCCGATATCGTCTTTGTGCAGTTTTGATCAAAACTGAAGAACCAAGAGTGGTCATAGGGTCTGAGTAAAAAGGCTCGGAAAAAGGCATTTTTGTAATCGGTATAGGTGTAGCCGTCGATATGATAGCCTGGGATAGAAAAAGGTTTTGTTGTATGATGATGTATAAAACCAAGGTCTTGGGTAGAACAAATTCGCAGGAATTTGCAGGTTGAATAGTTGATGAGGTTTGGGTTCGTCTTGTCTTTGTAATGGGTGATTTCTATAGATTTAGAGTCTACTAGAATATACTCATAAAAGGATTGGTTTTTGGTTATGTTATCTGTTGGCCAGGGACTGTCCTCGTAGAAGACTCGATTGATGAAGGTTTTGAGTTGGGTAAGGTTTACTGGTTTAGTGTATGGGGTCGTCATAAGGTGTTGCTTATAAGGTTTGGTGTAGTAGACTGGTTTAGTGTTTGGAGTAGTGTTTGAGGTTGTGTTTGGGGTTGCTGTAGATGATTGTGTTTCCGTTTTTGATGACTTTTCAGAGACTGCTTTTGAATAAGATAGAGGAGGATATTCAGCTAATGCTGAGTAAGGGTTTGGAGTTAAAGTCCTTCCTTGGAGATGTGGTTGGTTTTTGATATAATCCGTTGCTGTCATCTGCTTTTTCATCTTCTAGTCACTCATTTTGAATATCTTGTTGTTGTTGATTATCTGTGGATTTTCCCTGCAAATATTCTCTTGTTAGAAAGTCGGGTAAAGAATTTTTTTTCTCCTTTAATATATTGAATATCGAAATCGAAAACGGATAATATTGCTTGCCATCTAGCAAATATTTGTTTTGATACTAAGTTTTTGACATCTTTTTGCAATATTTCTTTTGCTGATTTGCAATCTACTCGCAATAAAAAAATTTTGTTTATTAAGTCGTCTTGGAATTTTGAGGTACAATTAACAATTGAGAGAACTTCTTTCTTAACTGTTGAATAATGCTTTTGTGGTCCTAACCAGACTCCTGAATGGAATCGAACTATAGATTCTTGTTTTGATTGTGGTAATTTTTGCTTAAGAATTCCTCCATAACCTATTTCTGAAGCATCAGTTTCAACTATCATGTCAGCTTCAGGATTTGGTATGGAAAGGCATGGAAGAGTTTTAACCTTTTGCTTAACTTGTTTGACTAAAAGGGTATGTTGATTAGTCCATGGTTTTGGATTCTTTTGTAACCGTTGAAATAATGGGTGAATTATTTTCCTAGATTGGGTAAGAAGTCTGAAACATAGTTTAGGCATCCCAAAAATCTTTGTAATTTGGTCTCTTCTCTTAATTCGTCAGGAAATTTATCTGCGAATTCAATTGATCTTGAAATAGGTGTGATTGTTCCTTGATATATATTATGTCCTAAAAATCTTAATTTTGTTTGGAATAAAGAAATTTTCTTGGCTGATATAACTAATCCATGTTTTTTAACTATATTGAGGAATGCATTTAAGTGACTAAGTTGGTC

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

598

Start:

3313284  

End:

3313881

Strand:

+

>A04_LTR-Caulimovirus_22

ACCTGCAAATTCCTGCGAATTTGTTCTACCCAAGACCTTGGTTTTATACATCATCATACAACAAAACCTTTTTCTATCCCAGGCTATCATATCGACGGCTACACCTATACCGATTACAAAAATGCCTTTTTCCGAGCCTTTTTACTCAGACCCTATGACCACTCTTGGTTCTTCAGTTTTGATCAAAACTGCACAAAGACGATATCGGGATGGTTCAACGAATGGTGGTACTGGTACGGACCAGCAGATCCGATCTACCCCGACCAAGTACTCAAGACCTCCTACCCATTCTACAAGAAACACGTATTTGATCAACCAGTTGGGCCTCTAAACAGAATTTGGTTTCATATTGACATGGGCATCCCATGGATATGTTCATGGCATTTTACCCTTGCTATCGCTCTCCAAGACATGCCTTATTCTCTCCTCCGGGAATTCAGAGTCAAATGGTGGGAAAAATATAACCTTGACAGATGTTCCCTTGCAGGTATCCAAAAATATTTCCAAATTACAAATCAAGCCAAAACAGCAATCCAAACTATATCCAAATCTATACCTCTTCTCAACCCAACCCAACCCAAATATCCCAAACAAATCC

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

833

Start:

6511918  

End:

6512750

Strand:

-

>A04_LTR-Caulimovirus_23

GGACAGAAATCTAAAACATAATTGAGACTTCCAAGGAACCTTTGTAATTGAGTTTTATCAACAATTTTATCTGGGAATTTATTTGAAAATTCTAAAGATCTTTCAAAAGGAGTTATCATACCTTGTGATATGTAGTGACCTAAAAATCTGATCTTTGTTGAAATAGGGACATTTTTGTTTTGGAAACAACAAGACCATTCTTTCTAGCAACGTAATAGAATGTTTTGAGATTTTTGAAATGTTCATCAATAGAATGTGAAAATCTAGTATATCATCAATGTAGACAATGCAAAATTTTGAATAATCAGAGAATATATCATTCATGATTCTTTGAAATTCAGAAGGTGCATTTTTAAACCAAATGGCATTACATTCTATTGGTACTGACCAAAAGAGACTGTAAATACTGTTTTATAACGATCATTCTCAGATATCTGAATTTGCCAAAATCCTGATTTTAGATCAAACTTTGAGAATATGTGGGCAGAGTAAAATCTTTGAAGTAAATCTTTTTATTTGGTATTGGATATCTAATCCATTTTAAAGCAGTGTTTAAAGGTTTGTAATTAATTACTAATCTTGGGGTTCCTCTTTCAATTTCAGAGTTTTTATTTACTTAAAAAACAGCACAAGACCAAGGAGATCTTGATTTCGAAATTAGTCATTTTTCTAGAAGATCCAAAATTTCTTTTCTACAATGTTTTTCTAATTTTGAGTTCATTTGAATTGGACGAGGTTTTGTGGGAATATCTTTTTCAAGAAAATTTCATAAGGTAAATCAATAATATGTTGTTTTCGATTCCAGAAAGCAGTTGGTAAATCTGAACAAATTT

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

333

Start:

9603091  

End:

9603423

Strand:

+

>A04_LTR-Caulimovirus_24

GCAAGTCTGAGAATAATGGTATCATAGTCTAATTCTCAGAATTGCGTTATGATAGATCGAATCCTTGTTTATCACTGATTGTTTTAAAAAATTTGGAAAACATCCTCTCATAATGTCTACCTCAAACCTTACATTCATTGATTCTCAGTTTGCAATTTCTATTTTCCCTAGAATTAAAAGCCGTTCTTCCTCTTCAAAAATAGATTCTCTATATGAAATCGAGTATGTTCCGGGCGACCAACTACCCGAAACAACCCTTCCCCTTGTAAACCCATATGAATATTTTACAAAAAAACCTAGCGCCTTTTCTGTTAAAGGTGTTCATGATCTCAT

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1736

Start:

9603428  

End:

9605163

Strand:

+

>A04_LTR-Caulimovirus_25

CCTTCATCAAGTCGGAAAGTCATGGAATATGTCCAGTCCAGCAAATTCTCGTCTTGTCAAGTTCCAGCCACAGAAGAAGAGCAATTCATTTCTCTAAACATCCCAGAAACCCTAGCTAGGTTATGGCAGCAACAGGGCTATACTCATCTTCACTTTGGTGTAGTAAGAATTGGTTTAACCTTACATGCGAGGAAAGGTTTACCTGTCATTGCTCGTATAGCTTTAATCGACTTTCGATTAAAGTTTTACCAGCAAGCGTGCATTGGAACGGTTCAAACAACATTAAACGCAGGAACAATATTTATAACACTGTTTCCAAACTTTAATGTTTCTTTACAAGACCCAAATCTCTTAAAGACGCTTAAAGTTCAACTTCAACTGGTCGGAGCATCTATGCAAGAAAAAAGTGTAGCAGCTACCTTGCATCATCAAATAGTCTACCGAATTCAAGACCACGCACTTGATCTTGTACTTCCCTCGTCAGACGAAGCACTATACTTCGAAGTTACTTCTGCATCTCAAGCGCCAAACTCGATCCAAATCCCTCGACAAATTTCTCGTGAAGAACTGTTGTGCCGACTACCGGAGTCATGGGTAACAAGTTACGAGAAGCTTCATCAAGCTACTCAGTCACCCATTCAATCATCTGAAGTCAGCTTTCACTCTCGAAATGATGGAACAACCGAGATCAAATTCGAAAAACTCCGATCATCTTTCCGAAAGTAGTTGTTCACTCAGTTCGCAATACAGATTGATGAACGAAGCTTCCACGGTCCAGCAAAAGAACAAAATCCTAAACCAAGTTCTTTTGAAAAGGATGGAACTGTGATCTATCCTTTCAAAGACAAAGACGGACATTGCTACTTCGATGTTTGTTCATGTGCTGCTTGTGATGAAGCAAGCTACAGCTACGAATCTTATGAAGATATTCGCATACGTCGAAGAAAAAAGAAAGATCCACTCGACAAAAGATATCTCGAGGGAGATACTTCTGTTGGACCACTTGGTGAAGGAAAGTATGACTTTATAGTTCAATACTCAGACAAGAAGGAAGAACCAAGGCAACAGAGTATGATGATCAACCCCAACGACTTCCCGCCACAAAAATAATTTTTAAAGAACAATGTTGCACATTGCCCACAAATTCTTTCTCAAGCCGTGGACTCTTCTGGTCCCAGCCAGTTAAGTCAAGCAGAGAAGGTCCTCAACTGGCAAACAGAAAATTCACTTGCGCAAAATCAACTCTTATCGACCATAAATCATAAGGTTGATCAATTGGCGTAAGAATACAATGGCAGATTACTCAGCCTCCAAAAATCGATCACTGAGATACACAGACGACTAGGCAATCTCCATCAAGAAATGATGACCATGGCAAAACATATGATGGCAAACACAACTCAATTTCGCAACAAAGAAGCAGAGACAACTAGTCTTAAATATCAGTTACGAGATCTCCAAAGATGTCTAGAGAGTATGGTTCAAAACCAGCAAACTAATGCGTACTTTGATCCCCTCGGAGGCACACCTTCAAGCATACCAATGTATCAAGGATCCTACTCACATGGCTTCCTTTTTGGTCAACAAACTCAAAAAACAAGATCCACAGTTTCGAGCTTTCTATCCTCTGATGAAGTCTTTACGTCTCGCTATGGTTCGACTTCAACCAACTATCATACCAAGATGACTCGATCCAAGCCCCAACGCTCAAAGGAGTCGGAATTTGAAGTTAACCC

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3726

Start:

9619340  

End:

9623065

Strand:

+

>A04_LTR-Caulimovirus_26

TATACCTCTCCTCCATCGACAATTATCTTAGTCAGCAGACTAAGCTATACATCAGAGATCAAGGACAAACAATAGAAGAAATTTCCATTGGACAAATACAGCAATATGTCTTCAGAACGCTGGATAAACTCTGCAAACAAAAAGAATTCTGGACGGAATTTATGGATAGATCAAAGCAACTATCAAAGATATATTCCCGACCGGATCTATCAATCAAGTGTTCTAAGTCCAAGAAATCTTGTTCGTGCGACCTACAAGAAAAACATCGAAGATTCAAAAAACGATTCTCTAGGCGCCCTGACAGATTCAGACGCAAGAGATTCTTTCGGAAGAAACGAGGCTTAAGGAAATCAACAAAATGCTTTCTATGTCGAAAGGAAGGACATTTTGCAAAAAGCTGTCCGAACAAGTCAGCTAAAAAGAAGCAGTACTTAATCAATTCAATATCTGAAATAACACCAGATATTGATCTTGAAGGCCACGATTTAGAATCAGTTCTATCTTTTGATAGTGACGACAACAATGCTATTTGTGGTTACTCAGATTATGACAACTCTTCTGACTCATCTGCCGAAGAAGAAAATGATTGCTGCTTCAAAATTACAAAAATGCCGCGACATGACGACATACAAACTCCTCATCTACCAGTGATGATTTTCGACCCATCTGGCCAAGAAGACCCGGTTTGCACCATTGCATTCATAGACACCGGAGCCCACACAACGATCATTAATCCCAAGATTCTTTCTCCGTCGATGTGGCTACCTCATCAGCAAGAATTTCGAGTCGCTAACTCAGGTTCACTGACAATAAAGCTCAAGTCAAAACCTATCAGAATCGAGCTTTTCCCCGGTTGTCATATTACTACGGAAGTCCTTGGTTCTACGGCACCTGGAAAAGATCTAATACTAGGATGGGATTCATATTATGCCTTCAAGAAAAAATTCGATATCTCTATCGAACCGCACATATTAAAATGGAAAAGTCTCTTCAAAGCATTCACGTCAATCCCACGACTTTTCGCAATTAAAGGATTAATCTCTCAAGAATTTACAAAGATCAAGGAGAAGTTGACGAAGATTTCTTGTGCAAGACTCTCATACATAATTCCTCCAGAAATGCAATATTAAACTCAGAGTTCTTTGTTTCTTTGCCATTCAAAGAAAATATACAAACCACCCCAACTAAAACAAGTCATGCAGGAATGCCACCAACCCTACTACAACAAGCGAATGAAGACTGCGACCAGCTAGTACAACAAGGAGTAGTCTCTGCAACCAACTCACCATGGGCATGCAAAGCTTTTTACGTTAACAATCGTGCAGAACAAGCAAGAGGGAAGCTAAGACTAGTTATCGACTACAAACCACTGAATCAGTATCTACAAGACATCAAATTTCCGCTACCAAACAAAATGGCGCTTCTTCAACATCTTCAAGGGGCAACTATTTTCTCAAAATTTGATCTTAAGTCAGGATTCTGGCAACTTGGTGTTCGTCCTGAAGAAAGATACAAAACTGCGTTCTGTCTTCCTAATCGTCATCTTCAGTGGAACGTCTTACCTTTTGGACTCAAGACCGCAACATCATTATTCCAGCAAGCGATGCTTCGTATATTCAAGCCTCTACTTCATACGTCTTTAATTTATATTGATGACATACTGCTGTTCTCGTCTACCGAAACCGAGCACATTCAGCTTCTTCAGCAATTTCAAAGCATTGTCATTCAATATGGAATCATGCTTTCGGCCCGAAAAATGGTCATAGCCCCGCCCAAAATCGACTTCCTTGGAATGCAAATCACAGATGGCAACTTTACGCCTCAGGCCCATCTGGCTACAACGCTCTTAGATTTTCCCGACGAAAATCTCACAAAGCGACAAGTCCAACAATTCCTCGGTGTAATCAATTATGTTAGCGACTTTATCCCCCAACTCTCGCAACTGACAAGACCGCTACAGAAAATGTTGACGAAGAATCCACCACAATAGACAAACCGACAAACTGAAGCTGTCAGAAGCCTGAAAATAGAGGTGCAGAAGCTATCGCCTTTAAAGATTCCCTCCACTGGAACACGCATTTTACAGACTGACGCGAGTGACAAATATTGGGGAGCCATTTTATTCGAAGAATTAAATGGAAAACGTCAAATCTGTGGATATAAAAGTGGACGCTTTAAAGAATCCGAGATGCATTATCACTCTACTTTCAAAGAAATACTGGCCGTCAAAAGGGCCATCGAGAAGTTCGAGTTCCATCTGATAGGACACCGATTTCGCATCGAAATGGACATGTCATCTTTCCCGAAGATGTTAAAATTCAAACAGAAGATGATCCCACATCAGCAATTATTACGATGGAACGAATGGTTCTCAAAGTACGATTTCGAATCCGTCTATTTAAAGGGCTCAAAGAATACTCTCGCAGATATGCTCAGTAGAAGTCCAGTAAAAGAAATACAAATAATGGAGAGCTCTTCCACAAAAAGCTACTATGACTTCGCCTCAAACATGCCCGACGATGCTCATTCGCTTATCGACAAAGAAACCCTACAGGAGCACCTCCGCAACAAGATTTTTTTCTATCAATCCGTCATCATGTCAAGATACGGATCCCATAATCATCTTATTTCACCTATGAGAATTCACCCGGACTACCCGTTCGCTCATCTCTACAGAATCGAAAACGCTTATTTACCAAAAGAAGTTCTCTGTTTTCTCTGGTACCTCTGCTCGCTCTACACTATTGGCATAACCTTTGATATTCAATGGTTATATCAGTATATCAACATGCAACTCACCAACTCTCAACGAGGTCACAAGGAATGTCTTGCAACATTTCTGACATGGTTCGCGCCATTATCAGCCTGGAACGGTAAGTTAAGGAAATCAGCGAAAGCAACAGGCTTATCATTTAAGAAGTTAAAAAGTCAAGGAGGTCTCAACCCTTTCTTCAACCCTCACACAATATACTTCTTCCACCGCCCTGTTCAAGTCAACAAAAAAACCGGCAAAGTCCACACACTGCCTACTCTCATTCACCACAACGACTACCAACGAGGAGTCAGACCAGATTTCAACCTCAACGACAACAAGCCATTTGAAGACTTTCAAACTTATGCGTTCCGCCTCAACAGTGCCACACAATCATTTCCCAGTCCTTCGTTCCAAATTGGTTCTATTACCCAATAGACTACCAAATGAGCCTCGACGAAGATCTGCAATTCTACTTGGATAAGAGTGACAAACCACAAGTGGTTAAACGCGCACAGAAGAAAGAGAAACGTAACTCTGAGTCCCAAGAATGCCCGCCAGAATACTTTCAAGACGCCCAGCTCCCAGACGACTCTATGAACATCGATGAGGTTGGAAGAATGTTCAACATTGATATCAACGACGACTCACAGCAGCCTCAAGAGAAAGAGCCAGAGAATGTGTACGAATATCCAAGAGATGTGTTCGAATGTCCAGACGATCACTACGGATGTTGTGAAAAACACATCATCGAGTTCGAAAAGGACCACTAAGCAAGTCGTCTGCAATGTATAATTATGTAAGATAAGTGTGTTTTATTATGTAAAATAAATATAATGAATAATGATGTAAGCGATGATGTAATCGCTACTAGAGTGTGATGTAAGCGATGATGTAATCGCTGAGGTAAGCGCTTATGTCAGCGCCCTATCTTGTACTATAAATATGTGTGTACCCCCTTTGTGAAATATCAT

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1367

Start:

11900399  

End:

11901765

Strand:

-

>A04_LTR-Caulimovirus_27

ATCATTTATTGATGGAGATAGCCTAGTCGACCGTGTATATCAGTGATCGATTTTTGAAGGCTGAGTAATCTGCTGTTGTATTCTTCTGCCAATTGATCAACCTTATGATTTATGGTCGATAAGAGTTGATTTTGTGCCAGTGAATTTTCTGTTTGCCAGTTGAGAACCTTCTCCGCTTGACTTAACAGGCTAGGACCAGATGAGTCCACGGTTTTAGAAAGAATTTTTGGGCAATGTGCAACATTGTTCTTAAAAAATTCTTCTTGTGGCGGGAAGTCTTTGGGGTTGATCATCATGATCTGCTGCCTTGGTTCATCCTTCTCTTCACAGTATTGAACTATAAAGTCGTACTTTCCTTCACCAAGTGGACCAACAGATGTGTCTCCTTCGAGATATTTTTTGTAGAGTGGGTCCTTCTTCTTTCTTCGACGTATGCGAATATCTTCATCAGATTCGTAGCTGTAACTTGCTTCATCACAAGTAGCACATGAACAAACATCGAAGTAGCAATGTTCGTCTTTGTCTTTGAAAGGATAGATCACAGTTCCATCCTTTTCAAAAGAACTTGGTTTTGGATTTTGTTCTTTTGCTGGACCGTGGAAGCTTCGTTCATCAATCTGTATTGCGAACTGAGTGAACAACTGCTTTCGGAAAGATGATCGGGGTTTTTCGAATTTGATCTCGGTTGTTCCATCATTTCGAGAGTGAAAGCTGACTTCAGATGATTGAATGGGTGATTGAGTAGCTTGATGAAGCTTTTCGTAACTTGTTACCCATGACTCCGGTAGTCGGCGCAACAGTTCTTCACGAGAAATTTGTCGAGGGATTTATATCGAGTTTGGCGCTTGAGATGCTGAAGTGACTTCGAGGTATAGTGCTTCGTCTGACGAGGGAAGTACAAGATCAAGTGCGTGGTCTTGAATTCGGTAGACTATTTGATGATGCAAGGTAGCTGCTACACTTTTTTCTTGCATAGGTGCTCCGACTAGTTGAAGTTGAACTTTAAGCGTCTTTAAGAGATTTGGATCTTGTAAAGAAACATTAAAGTTTGGAAACAGTGTTATAAATACTGTTCCTGCTTTTAATGTTGTCTGAACCGTTCCAATGCATGCTTGCTGGTAGGACTTTAATCGAGAGTCGATTAAAGCTATACGAGCAATGACAGGTAAACGTTTTCTCGCATGTAAGGTTAACCCAATTCGTACTACACCAAAGTGAAGATGAGTATAGCCTTGTTGCTGCCATAACCTATGTAGGTTTTCTGGGATGTTTAGAGAAATAAATTGCTCTTCTTCTGTAGCTGGAACTTGACAAGACAAGAATTTGCTGTACTGGACATATTCCATGACTTTCCGACTTGATGAAGG

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

370

Start:

11901770  

End:

11902139

Strand:

-

>A04_LTR-Caulimovirus_28

ATGAGATCTCGAACACCTTTAACAAAAAAGGCGCTAGGCTTTTTTGTAAAATATTCATATGGGTTTACAAGGGGAAGGGTTGTTTCGGGTAGTTGGTCGCCTGGAACATATTCGATTTCATATAGGGAATCTATTTTTGAAGAGGAAGAACGGCTTTTACTACGAGGGAAAGTAGAAATTGCAAACTGAGAATCAATGGATGTAGGATTTGAGGTAGGCATTATGAGAGGATGTTTTCCAAATTTCTTAAAACAATCAGTGATAAACAAGGATTCGATCTATCATAACGCAAGTCTGAGAATCAGGCTCTGATACCATTATGCCGAGCATCAAACGGACCGTCGTGTTGACAAAGTCTTATTGACAGTCG

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2694

Start:

11902235  

End:

11904928

Strand:

-

>A04_LTR-Caulimovirus_29

AGCATCAAACGGACCGTCGTGTTGACAAAGTCTTATTGACAGTCGAGGGTATGGTAATTTCCAAGTATTGGGAGCAATCTGGGCACTACTCTAGCCTAGCTCAACCACTTTTAGGAAATTACCTCCCCACGAAGATCGTGTTGACAGTGTCGTATTGACAGAACCGCTTATGCTTTAATTAATGCAACGGACAGAATCGGGACTTGCGATTGAAGATAGAAATCAAAGCTTATCAAAGATGAGATAAGTTCTGGAAAACTTAGGAATTTAGAAGAACATTGGAGAGAGAAAATATAGAGAGAGGTTTTTATGAAATTATTAGATGATATTTCACAAAGGGGGTACACACATATTTATAGTACAAGATAGGGCGCTGACATAAGCGCTTACTTCAGCGATTACATCATCGCTTACATCACACTTTAGTAGCGATTACATCATCGCTTACATCATTATTCATTATACTTATTTTACATAATAACACACTTATCTTACATAATTAAACATTGCAGACGACTTGCTTAGTGGTCCATTTCGAACTCGATGATGTGTTTCTCACAACATCCGTAGTGATCATCTGGACATTCGAATACATCTCCTGGATATTCGTACACATTCTCTGGCTCTTTCTCCTGAGGCTGCTGTGAGTCGTCGTTGATATCAATGTTGAACATTCTTCCAACCTCATCGATGTTCATAGAGTCGTCTGGGAGCTGGGCGTCTTGAAAATATTCTGGCGGGCATTCCTGGGACTCAGAGTTACGCTTCTCTTTCTTCTGCGCTCGTTTAACCACTTGTGGTTCGTCACTCTTATCCAAGTAGAATTGCAGATCTTCGTCGAGACTCATTTGGTAGTCTATTGGGTAATAGAACCAGTTCGGGACGAAGGGAATGGGAAATGATTGTGTGGCACTGTTGAGGCGGAACGCATGAGTTTGAAAGTCTTCAAATGGCTTGTTGTCGTTGAGGTTGAAATCTGGTCTGACTCCTCGTTGGTAGTCATTGTGGTGAATGAGAGTAGGCAGTGCGTGGACTTTACCGGTTTTTTTGTTGACTTGAACAGGGCGATGGAAGAAATATATCGTGTGAGGGTTGAAGAAAGGGTTGAGACCGCCTTGACTTTTTAACTTCTTGAATGATAAACCTGTTGCTTTCGCTGATTTCCTTAACTTACCGTTCCAGGCAGATAATGGCGCCAACCAGGTCAGAAATGTTGCAAGGCATTCCCTGTGACCTCGTTGAGAGGTGGTGAGTTGCGTGTTGATATACTGATATAACATTGAATATCAAAGGTTATGCCAATAGTGTAGATCGAGCAGAGGTACCAGAGAAAACAAAGAACTTCTTTTGGTAAGTAAGCGTTTTCGATTCTGTAGAGATGAGCGAACGGGTAGTCCGGGTGAATTCCCATAGGTGAAATAAGATGATTATGGGATCCGTATCTTGACATGATGATGGATTGATAGGCAAAGATCTTGTTGCGGAGGTGCTCCTGTAGGGTTTCTTTGTTGATAAGCGAATGAGCGTCGTCGGGTATGTTTGAGGCGAAGTCATAGTAGCTTTTTGTGGAAGAGCTTTCCATTATTTGTATTTCTTTTACTGGACTTCTGCTGAGCATATCTGCGAGAGTATTTTTTGAGCCCTTTAAATAGACGGATTCGAAATCGTATTTTGAGAACCATTCGCTCCATCGTAATAATTGCTGATGCGGGACCATCTTCTGCTTGAATTGTAACATCTTCGGAAAAGATGACATGTCCATTTCGATGCGAAATCGGTGTCCTATCAGATGGAACTCGAACTTCTCGATGGCCTTTTTGACGGCCAGTATTTCTTTGAAAGTAGAGTGATAATGCATCTCGGAATCTTTAAAGCGTCCACTTTTATATCCACAGATTTGACGTTTTCCATTTATTTCTTCGAATAAAATGGCTCCCCAATATTTGTCACTCGCGTCAGTCTGTAAAATGCGTGTTCCAGTGGAGGGAATCTTTAAAGGCGGTAGCTTCTGCACCTCTACTTTTAGGCTTCTGACAGCTTTGGTTTGTCGGTTTGTCCAATTTGGTGGATTCTTCGTTAGCATTTTCTGTAGGGGTCTTGTCAGCTGCGAAAGTTGCGGGATAAAGTCGCTAACATAATTGATTACACCGAGGAATTGTTGGACTTGTCGTTTTGTGAGATTTACGTCGGGAAAATCTAAGAGCATCGTAGCCAGATGGGCCTGAGGCGTAAAGTTGCCATCTTTGATTTGCATTCCAAGGAAGTCGATTTTGGGCTGGGCTATGACCATTTTTCGGGCCGAAAGCATGATTCCATATTGAATGACAATTTTTTGAAATTGCTGAAGAAGCTGAATGTGCTCGGTTTTGGTAGACGAGAACAACAGTATGTCATCAATATAAATTAAAGCCGTATGAAGTAGAGGCTTGAATATACGAAGCATCGCTTGTTGGAATAATGATGGTGCGGTCTTGAGTCCGAAAGGTAAGACGTTCCACTGCAGATGACGATTAGGAAGACAGAACGCAGTTTTGTATCTTTCTTCAGGATGAACGTCAAGTTGCCAGAATCCCGACTTAAGATCAAATTTTGAGAAAATAGTTGCCCCTTGAAGATGTTGAAGAAGCGCCATTTTGTTTGGTAGCGGAAATTTGATGTCTTGTAGATACTGATTCAGTGGTTTGTAGTCGATGA

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2054

Start:

11904906  

End:

11906959

Strand:

+

>A04_LTR-Caulimovirus_30

ATTCAGTGGTTTGTAGTCGATGAAATGATGACTATGGCAAAACATATGATGGGAAACACAACTCAATTTCACAACAAAGAAGCAGAGACAACTAGTCTTAAATATCAGTTACGAGATCTCCAAAGATGTCTAGAAAGTATGGTTCAAAACCAGCAAACTAATGCGTACTTTGATCCCCTCGTAGGCACACCTTCAAGCATACCAATGTATCAAGGATCCTACTCACCTGGCTTCCTTTTTGGTCAACAAACTCAAAAAACAAGATCCCCAGTTCTGAGCTTTCTATCCTCTTATGAAGTCTTTACGTCTCGCTATGGTTCGACTTCAACCAACTATCATACCAAGACGACTCGATCTAAGCCCCGACGCTCAAAGGAGTCGGAATTTCAAGTCAACCCAAGTAAGAAACCGACTCTTACATCTTCCTCCAGTCATGAGTCAGTTGATGACAGCAAAATGAAAGGAAAGGACATTGGAATAATCGAATTTTCAATGGCCAACCTGCTCAATAACCTTAGTGAGATTCCGGAGTTGCCTGTTCAAAAGGATCAACAACCCTTATCTTCTCGACAGATCACAAAATTTAGTCACTATTCAGACACAAATTCCAGTGACTATGAAACCGAATCAAATGATAGTTCCCTACCGAGACAATTCGCGATCAGAGAAGGATCAAGCACTCCAAAGAAAGAGCCAGATATCAACGAAGTCTATTCCAGCGACGAAGAAATGAACTATGCGCCTCTAAATCAACCTCCAAATCAAGAGATTCCAACGAAGCAATTTTCTTCAAAAATTATGGTGTTCACTTTTGATGATATACCATTTGAAAAATGGAATGATCGTCTCGACTAGTTTCATGCGTGGATGAATTCTGAAGCTATCACATCCCCTTTGCAATTGGTGATCCAACAATTCACAGCAAGACTATCTGGAGCTCTTAAAGAATGGTGGAATTCACTCGGCGAATATAGACAGCAGCAAGTATATCAAACAACAATCCATTGCTTCTGAAGAAATCCACAGAGAATTCATTGGTACACCTCACGACATCAAAAGAGCAACTACAAGAGAATTTTCTCAGCAAAGTGTGTTCATTAGAAGAAAGACTCTTCAAAACACTTTGAAAGAGCAGACGAGAAGGATACTATTCTGCCTTGAAGGCCTCAACAATCCGCAAGCTGAAGCACTATACCTCTCCTCCATCGACAGATTATCTTAGTCAGCAGACTAAGCTATACATCAGAGATCAAGGACAAACAATAGAAGAAATTTCCATTGGACAAATACAGCAATATGTCTTCAGAACGCTGGATAAACTCTGCAAACAAAAAGAATTCTGGACGGAAGTTTATGGATAGATCAAAGCAACTATCAAAGATATTTCCCGACCGGATCTATCAATCAAGTGTTCTAAGTCCAAGAAATCTTGTTCGTGCGACCTCACAAGAAAAACATCGAAGATTCAAAAAAGATTCTCTAGAGCGCCCCGACAGATTCAGAGCAAGAGATTCTTTCGGAAGAAACGAGGCTTAAGGAAATCAACAAAAATGCTTTCTATGTCGAAAGGAAGGACATTTTGCAAAAAACTGTCCGAACAAGTCAGCCAAAAAGAAGCAGTACTTAATCAATTCAATATCTGAAATAACACCAGATATTGATCTTGAAGGCCACGATTTAGAATCAGTTCTATCTTTTGATAGTGACGACAACAGATGCTATTTGTGGTTACTCAGATTATGACAACTCTTCTGACTCATCTGCCGAAGAAGAAAATGATTGCTGCTTCAAAATTACAAAAATGCCGCGACATGACGACATACAAACTCCTCATCTACCAGTGATGATTTTCGACCCATCTGGCCAAGAAGACCCGGTTTGCACCATTGCATTCATAGACACCGGAGCCCACACAACGATCATTAATCCCAAGATTCTTTCTCCGTCGATGTGGCTACCTCATCAGCAAGAATTTCGAGTCGCTAACTCAGGTTCACTGACAATAAAGCTCAAGTCAAAACCTATCAGAATCGAGCTTTTCCCCGGTTGTCANG

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

849

Start:

11906949  

End:

11907797

Strand:

+

>A04_LTR-Caulimovirus_31

CGGTTGTCANGACAACAATGCTATTTGTGGTTACTCAGATTATGACAACTCTTCTGACTCATCTGCCGAAGAAGAAAATGATTGCTGCTTCAAAATTACAAAAATGCCGCGACATGACGACATACAAACTCCTCATCTACCAGTGATGATTTTCGACCCATCTGGCCAAGAAGACCCGGTTTGCACCATTGCATTCATAGACACCGGAGCCCACACAACGATCATTAATCCCAAGATTCTTTCTCCGTCGATGTGGCTACCTCATCAGCAAGAATTTCGAGTCGCTAACTCAGGTTCACTGACAATAAAGCTCAAGTCAAAACCTATCAGAATCGAGCTTTTCCCCGGTTGTCATATTACTACGGAAGTCCTTGGTTCTACGGCACCTGGAAAAGATCTAATACTAGGATGGGATTCATATTATGCCTTCAAGAAAAAATTCGATATCTCTATCGAACCGCACATATTAAAATGGAAAAGTCTCTTCAAAGCATTCACGTCAATCCCACGACTTTTCGCAATTAAAGGATTAATCTCTCAAGAATTTACAAAGATCAAGGAGAAGTTGACGAAGATTTCTTGTGCAAGACTCTCATACATAATTCCTCCAGAAATGCAATATTAAACTCAGAGTTCTTTGTTTCTTTGCCATTCAAAGAAAATATACAAACCACCCCAACTAAAACAAGTCATGCAGGAATGCCACCAACCCTACTACAACAAGCGAATGAAGACTGCGACCAGCTAGTACAACAAGGAGTAGTCTCTGCAACCAACTCACCATGGGCATGCAAAGCTTTTTACGTTAACAATCGTGCAGAACAAGCAAGAGGGAAGCTAAGACTAGTT

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1311

Start:

11907843  

End:

11909153

Strand:

-

>A04_LTR-Caulimovirus_32

TTGAAGGCTGAGTAATCTGCTGTTGTATTCTTCTGCCAATTGATCAACCTTATGATTTATGGTCGATAAGAGTTGATTTTGTGCCAGTGAATTTTCTGTTTGCCAGTTGAGAACCTTCTCCGCTTGACTTAACAGGCTAGGACCAGATGAGTCCACGGTTTTAGAAAGAATTTTTGGGCAATGTGCAACATTGTTCTTTAAAAATTCTTCTTGTGGCGGGAAGTCTTTGGGGTTGATCATCATGATCTGCTGCCTTGGTTCATCCTTCTCTTCAGAGTATTGAACTATAAAGTCGTACTTTCCTTCACCAAGTGGACCAACAGATGTGTCTCCTTCGAGATATTTTTTGTAGAGTGGGTCCTTCTTCTTTCTTCGACGTATGCGAATATTTTCATCAGATTCGTAGCTGTAACTTGCTTCATCACAAGTAGCACATGAACAAACATCGAAGTAGCAATGTCCGTCTTTGTCTTTGAAAGGATAGATCACAGTTTCATCCTTTTCAAAAGAACTTGGTTTTGGATTTTGTTCTTTTGCTGGACCGTGGAAGCTTCGTTCATCAATCTGTATTGCGAACTGAGTGAACAACTGCTTTCGGAAAGATGATCGGGGTTTTTCGAATTTGATCTCGGTTGTTCCATCATTTCGAGAGTGAAAGCTGACTTCAGATGATTGAATGGGTGATTGAGTAGCTTGATGAAGCTTTTCGTAACTTGTTACCCATGACTCCGGTAGTCGGCGCAACAGTTCTTCACGAGAAATTTGTCGAGGGATTTTTATCGAGTTTGGCGCTTGAGATGCTGAAGTGACTTCGAGGTATAGTGCTTCGTCTGACGAGGGAAGTACAAGATCAAGTGCGTGGTCTTGAATTCGGTAGACTATTTGATGATGCAAGGTAGCTGCTACACTTTTTTCTTGCATAGGTGCTCCGACTAGTTGAAGTTGAACTTTAAGCGTCTTTAAGAGATTTGGATCTTGTAAAGAAACATTAAAGTTTAGAAACAGTGTTATAAATACTGTTCCTGCATTTAATGTTGTCTGAACCGTTCCAATGCATGCTTGCTGGTAGGACTTTAATCGAGAGTCGATTAAAGCTATACGAGCAATGACAGGTAAACCTTTTCTCGCATGTAAGGTTAACCCAATTCGTACTACACCAAAGTGAAGATGAGTATAGCCTTGTTGCTGCCATAACCTAGGTAGGTTTTCTGGGATGTTTAGAGAAATAAATTGCTCTTCTTCTGTAGCTGGAACTTGACAAGACGAGAATTTGCTGGACTGGACATATTCCATGACTTTCCGACTTGATGA

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

323

Start:

11909161  

End:

11909483

Strand:

-

>A04_LTR-Caulimovirus_33

ATGAGATCTCGAACACCTTTAACAGAAAAGGCGCTAGGCTTTTTTGTAAAATATTCATATGGGTTTACAAGGGGAAGGGTTGTTTCGGGTAGTTGGTCGCCTGGAACATATTCGATTTCATATAGGGAATCTATTTTTGAAGAGGAAGAACGGCTTTTACTACGAGGGAAAGTAGAAATTGCAAACTGGGAATCAATGGATGTAGGATTTGAGGTAGACATTATGAGAGGATGTTTTCCAGATTTCTTAAAACAATCAGTGATAAACAAGGATTCGATCTATCATAACGCAAGTCTGAGAATCAGGCTCTGATACCATTATTT

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

114

Start:

11909491  

End:

11909604

Strand:

-

>A04_LTR-Caulimovirus_34

TTTTACTGGACTTCTGCTGAGCATATCTGCGAGAGTATTCTTTGAGCCCTTTAAATAGACGGATTCGAAATCGTATTTTGAGAACCATTCGCTCCATCGTAATAATTGCTGATG

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

473

Start:

11909600  

End:

11910072

Strand:

+

>A04_LTR-Caulimovirus_35

TGATGACCATGGCGAAACAAATGATGGCAAAGACAACCCAATTTCACAACAAAGAAGCAGAGACAACTAGTCTTAAATATCAGTTATGAGATCTCCAAAAATGTCTAGAAAGCATGGTTCAAAACCAGCAAGCTAATGCGTACTTTGATCCCCTTGGCGGCACACCTTCAAGCATACCAATGTACCAAGGATCCTACTCACCTGGCTTCCTTTTTGGTCAACAAACACAAAAAACAAGATCCTCGGTTCCGAGCTTTCTGTCCTCTGATGAAGTCTTTACATCTCGTTATGGTTCGACTTCAACCAACTATCATACCAAGACGACTCGATCCAAGCCTCGACGTTCAAAAGAATCGGAATTTCAAGTCAACCCTAGTAAGAAACCGACTCTTACATCTTCCTCCAGCCATGAGTCAGCAGAAGACAGCAAAAGAGAAAAAAAAAGGACATTGGAATAATCGAATTTTTCAATG

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

381

Start:

11910190  

End:

11910570

Strand:

+

>A04_LTR-Caulimovirus_36

ATGAAACCGAATCGAATGATAGTTCCTACCAAGACAATTTGCAATCGAGAAGGTCAAGTACTCAAAGAAAGAGCCAGATATCAACGAAGTCTATTCCAGCGACGAAGAGATGAAATATGCGCCTCCAAATCAACCTCCAAATCAAGAGATTCCAACGAAGCAATTTTCTTTCAAAAATTATGGTGTTCACTTTTGATGATATACCATTTGAAATGGAATGATCGTCTCGACGAGTTTCATGCGTGGATGAATTCTGAAGCTATCACATCCCCTTTGCAATTGGTGATCCACAGTTTACAGCAAGACTATCTGGAGCCCTTAAAGAATGGTGGAATTCACTTGGCGAATATAGACAGCAGCAAGTATATCAAACAACAATAC

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

610

Start:

11910607  

End:

11911216

Strand:

+

>A04_LTR-Caulimovirus_37

TCGACAGATTCAGACGCAAGAGATTCTTTCGGAAAAAATGAGGCTTAAGGAAATCAACAAAATGCTTTCTATGTCGAAAGGAAGGACATTTTGCAAAAAACTGTCCAAACAAGTCAGCTAAAAAGAAGCAGTACTTAATCAATTCAATATCTGAAATAGCACCAGATATTGATCTCGAAGGCCACGATTTAGAATCAGTTCTATCTTATGATAGTGACGACAACGATGCTATTTGTGGCTTCTCAGATTATGACAACTCGTCTGATTCATCTGCAGAAGAAGAAAATGATTGCTGCTTCAAAATTACAAAAATATCGCGACATGACGACATACAAACTCCTCATCTACCAGTGATGATTTTAGACCCATCTGGTCAAGAAGAACCGGTTCGCGCCATCGCATTCATAGACACCGGAGCCCACACAACGATCATTAATCCCAATATTCTTTCTCCGTCGATGTGGCTACCTCACCAGCAAGAATTTCGAGTCGCTAACTCAGGGTCATTAACAATAAAGCTCAAGTCAAAACCTATCAGAATCGAGCTCTTCCCCGGTTGTCATATTACTACAGAAGTCCTTGGCTCTACGGCGCCTGGAAAAGATCTAAT

Brassica juncea (Tumida_V1.5)

ID:

A04_LTR-Caulimovirus_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

317

Start:

11911217  

End:

11911533

Strand:

+

>A04_LTR-Caulimovirus_38

AATTTCATAAAAACTTCTCTCTATATTTTCTCTCTCCAATGTTCTTCTAAATTCCTAAGTTTTCCAGAACTTATCTCATCTTTGATAAGCTTTGATTTCTATCTTCAATCGCAAGTCCCGATTCTGTCCGTTGCATTAATTAAAGCATAAGCGGTTCTGTCAATACGACACTGTCAACACGATCTTCGTGGGGAGGTAATTTCCTAAAAGTGGTTGAGCTAGGCTAGAGTAGTGCCCAGATTGCTCCCAATACTTAGAAATTACCATATCCTCGACTGTCAATAAGATTTTGTCAACACGACGGTCTGTTTGATGCT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

372

Start:

7364611  

End:

7364982

Strand:

+

>A05_LTR-Caulimovirus_39

CTCGTCTGTCAATAAGACTTTGTCAACACGACGGTCCGTTTACCGCTTGGCATAATGGTATCAGAGCCTAATTCTCAGACTTGCGTTATGATAGATAGAATCCTTGTTTATCACTGATTGTTTTAAGAAATCTGGAAAATATCCTCTCATAATATCTACCTCAAACCCTACATCCATTGATTCTCAGTTTGCAATTTCTACTTTCCCTAGAAGTAAAAACCGTTCTTCCTCTTCAAAAATAGATTCCCTATATGAAATCGAGTATGTTCCGGGCGACCAACTACCCGAAACAACCCTTCCCCTTGTAAACCCATATGAATATTTTACAAAAAAGCCTAGCGCCTTTTCTGTTAAAGGTGTTCGTGATCTCAT

Brassica juncea (Tumida_V1.5)

ID:

A05_LTR-Caulimovirus_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

5322

Start:

7364987  

End:

7370308

Strand:

+

>A05_LTR-Caulimovirus_40

CCTTCATCAAGTCGTAAAGTCATGGAATATGTCCAGTCCAGCAAATTCTCGTCTTGCCAAGTTCCAGCTACGGAAGAAGAGCAATTCATTTCTCTAAACATCCCAGAAAACCTGCTTAGGTTATGGCAGCAACAAGGCTATACTCATCTTCACTTTGGTGTAGTAAGAATTGGTTTAACCTTACATGCGAGGAAAGGTTTACCTGTCATTGCTCGAATAGCTTTAATCGACTCTCGATTAAAGTCTTACCAGCAAGCGTGCATTTGAACGGTTCAAACAACATTAAATGCATGAACAGTATTCATAACACTGTTTCCAAACTTTAATGTTTCTTTACAAGACCCAAATCTCTTAAAGACGCTTAAAGTTCAACTTCAACTGATCGGAGCACCTATGCAAGAAAAAAGTATAGCAGCTACCTTGCATCATCAAATAGTCTACCGAATTCAAGACCACGCACTTGATCTTGTACTTCCCTCGCAGACGAAGCGCTATACCTCGAAGTCACGTCCGCATCTCAAGCGCCAAACTCGATCCAAATCCCTCGACAAATTTCTCGTGAAGAACTGTTGCGCCGACTACCGGAGTCATGGGTAACAAGTTACGAGAAGCTTCATCAAGCTACCCAGTCACCCATTCAATCGTCTGAAGTCAACTTTCACTCTCGAAATGATGGAACAACAGAGATCAAATTCGAAAAACCCCGATCATCTTTCCGGAAGCAGTTGTTCACTCAGTTCGCAATACAGATTGATGAACGAAGCTTCCACGGTCCAGCAAAAGAACAAAATCCTAAACCAAGTTCTTTTGAAAAGGATGAAACTGTGATCTATCCTTTCAAAGACAAAGATGGACATTGCTACTTCGATGTTTGTTCATGTGCTGCTTGTGATGAAGCAAGCTACAGCTACGAATCTGATGAATACATTCGCATACGTCGAAGAAAAAAGAAGGACCCACTCTACAAAAGATATCTCGAAGGAGACACCTCTGTTGGTCCACTTGGTGAAGGAAAGTACGACTTTATAGTTCAATACTCTGACAAGAAGGAAGAACCAAGGCAGCAGATCATGATGATCAACCCCAACGACTTCCCGTCACAAGAAGAATTTTTAAAGAACAATGTTGCACATTGCCCAAAAATTCTCTCAAGCCGTGGACTCTTCTTGTCCCAGCCAGTTAAGTCAAGCAGAGAAGGTCCTCAACTGGCAAACAGAAAATTCACTTGCGCAAAATCAACTCTTATCGACCATAAATCATAAGGTTGATCAAATGGCGGAAGAATACAATGTCAGATTACTCAGCCTCCAAAATTCGATCAATGAGATACACGGACGACTGAGCAATCTCCATCAAGAAATGATGACTATGGCAAAACATATGATGGGAAACACAACTCAATTTCACAACAAAGAAGCAGAGACAACTAGTCTTAAATATCAGTTACGAGATCTCCAAAGATGTCTAGAAAGTATGGTTCAAAACCAGCAAACTAATGCGTACTTTGATCCCCTCGTAGGCACACCTTCAAGCATACCAATGTATCAAGGATCCTACTCACCTGGCTTCCTTTTTGGTCAACAAACTCAAAAAACAAGATCCCCAGTTCTGAGCTTTCTATCCTCTTATGAAGTCTTTACGTCTCGCTATGGTTCGACTTCAACCAACTATCATACCAAGACGACTCGATCTAAGCCCCGACGCTCAAAGGAGTCGGAATTTCAAGTCAACCCAAGTAAGAAACCGACTCTTACATCTTCCTCCAGTCATGAGTCAGTTGATGACAGCAAAATGAAAGGAAAGGACATTGGAATAATCGAATTTTCAATGGCCAACCTGCTCAATAACCTTAGTGAGATTCCGGAGTTGCCTGTTCAAAAGGATCAACAACCCTTATCTTCTCGACAGATCACAAAATTTAGTCACTATTCAGACACAAATTCCAGTGACTATGAAACCGAATCAAATGATAGTTCCCTACCGAGACAATTCGCGATCAGAGAAGGATCAAGCACTCCAAAGAAAGAGCCAGATATCAACGAAGTCTATTCCAGCGACGAAGAAATGAACTATGCGCCTCTAAATCAACCTCCAAATCAAGAGATTCCAAAGAAGCAATTTTCTTCAAAAATTATGGTGTTCACTTTTGATGATATACCATTTGAAAAATGGAATGATCGTCTCGACTAGTTTCATGCGTGGATGAATTCTGAAGCTATCACATCCCCTTTGCAATTGGTGATCCAACAATTCACAGCAAGACTATCTGGAGCTCTTAAAGAATGGTGGAATTCACTCGGCGAATATAGACAGCAGCAAGTATATCAAACAACAATACCATTGCTTCTTGGAGAATCCATAGAGAATTCATTGGTACACCCACACACCAGAAAGAGCACCTACAAGAAGAATTCTTCTCAGCAAAGTGCTGTTCATTGAGAAAGAAAGATCTTCCAAAACACTTTGAAAGAGAGACACGAAGATACTACGCGCTGAATGGCCTTAACAATCCGAGCCTGAAGCACTATACCTCTCCTCCATCGACGATTATCTTAGTCAGCAGACTAAGCTATACATCAGAGATCAAGGACAAACAATAGAAGAAATTTCCATTGGACAAATACAGCAATATGTCTTCAGAACGCTGGATAAACTCTGCAAACAAAAAGAATTCTGGACGGAGTTTATGGATAGATCAAAGCAACTATCAAAGATATGTTCCCGACCGGATCTATCAATCAAGTGTTCTAAGTCCAAGAAATCTTGTTCGTGCGACCCACAAGAAGAACATCGAAGATTCAAAAAATGATTCTCTAAGCGCCCCGACAGATTCAGATGCAAGAGATTCTTTCGGAAGAAACGAGGCTTAAGGAAATCAAAAAAATGCTTTCTATGTCGAAAGGAAGGACATTTTGCAAAAAACTGTCCGAACAAGCCAGCCAAAAAGAAGCAGTACTTAATCAATTCAATATCTGAAATAGCACCAGATATTGATCTTGAAGGCCACGATTTAGAATCAGTTCTATCCTATGATAGTGACGACAACGATGCTATTTGTGGTTACTCAGATTATGACAACTCTTCTGACTCATCTGCCGACGAAGAAAATGACTGCTGCTTCAAAATTACAAAAATGCCGCGACATGACGACATACAAACTCCTCATTTACCAGTGATGATTTTCGACCCATCTGGTCAAGAAGACCGGGTTCGCGCCATTGCATTCATAGACACCGGAGCCCACACAACGATTATTAATCCCAAGATTCTTTCTCTGTCGATGTGGCTACCTCATCAGCAAGAATTTCGAGTCGCTAACTCAGGTTCACTGACAATAAAGCTCAAGTCAAAACCTATCAGAATCGAACTTTTCCCCGGTTGTCATATTACTACGGAAGTCCTTGGCTCTACAGCACCTGGAAAAGATCTAATACTATGATGGGATTAATATTATGCCTTCAAGAAAAAATTCGATATCTCTATCAGACCGCACGGATTAAAATGGAAAAGTCTCTTCAAAGCCTTCACGTCAATTCCACGACTTTTCGCAATTGAAGGATTAATCTCTCAAGAATTTACAAAGATCAAGGAGAAGTTGACGGAGATTTCTTGTGCAGACTCTCATACAGAATTCCTCCAGAAATGCAATAACCCGCTGTGGTTAAACTCGGAGTTCTTTGTTTCTTTGCCATTCAAAGAAAATATACAAACCACCCAAACTAAAGCGAGTCATGCAGGAATGCCACCAACCCTACTGCAACAAGCGAATGAAGAATGCGACCAGCTAGTACAACAAGGAGTAGTCTCTGCAACCAACTCGCCATGGACATGCAAAGCTTTTTTACGTTAATAATCGTGCAGAACAAGCAAGAGGGAAGCTAAGACTAGTTATCGACTACAAACCGCTGAATCAGTATCTACAAGACATCAAATTTTCGCTACCAAACAAAATGGCGCTTCTTCAACATCTTCAAGGGGCAACTATTTTCTCCAAATTTGATCTTAAGTCGGGATTCTGGCAACTTGGTGTTCATCCTGAAGAAAGATACAAAACTGCGTTCTGTCTTCCTAATCGTCATCTTCAGTGGAACGTCTTACCTTTCGGACTCAAGACCGCACCATCATTATTCTAGCAAGCGATGATTCGTATATTAAAGCCTCTACTTCACACGGCCTTAATTTATATTGATGACATACTGCTATTCTCGTCTACCAAAACAGAGCATATTCAGCTTCTTCAGCAATTTCAAAGCATTATCATTCAATATGGAATCATGCTTTCGGCCCGAAAAATGGTCATAGCCCAGCCCAAAATCGACTTCCTTGGAATGCAAATCACAGATGGCAGCTTCACACCTCAAGCCCATCTTGCTACAACACTTTTAGATATTCCCGACGAAAATCTCACAAAGCGACAAGTCCAACAATTCCTGGGTGTAATCAATTATGTTAGCGATTTTATCCCGCAACTTTCGCAACTGAAAAGACCGCTACAGAAAATGCTGACGAAGAATCCACCACAATGGACAAAACGACAAACCGAAGCTGTCAGAAGCCTGAAGATAGAGGTGCAGAAGCTACCGCCTTTAGATTCCCTCCACTGGAACACGCATTTTACAGACTGACGCAAGTGACAAATATTAAGGAGCTACTTATTCGAAGAAATAAATGGGAAACGTCAAATCTGCGGATATAAAAGCGGACGCTTTAAAGATTCTGAGATGCATTATCACTCTACTTTCAAAGAAATACTGGCCGTCAAAAAGGCCATCGAGAAGTTAGAGTTCCATCTGATAGGACACCGATTTCGCATCGAAATGGACATGTCATCCTTTCCGAAGATGTTACAATTCAAACAGAAGATAGTCCCACATCAGCAATTATTACGCTGGAGCGAATGGTTCTCAAAGTACGATTTCGAATCCGTCTATTTAAAGGGCTCAAGAAACACTCTCGCAGATATGCTTAGTAGAAGTTCAGTAAAAGAAATACAAATAACGGAGAGTTCTTCCACAAAAAGTTACTACGACTTCTCCTCAAACATGCCCGACGATGCTCATTCGCTTATCGACAGAGAAACCATACATGAGCACCTCTGCAACAAAATTTTCTTCTATCAATCCATCATCCTGTCAAAATACGGAACCCATAATCAACTTATTTCGCCTACGGGGATTCACCCGGACTACCCATTCGCTCATCTCTACAGGATCGAAAACGTTTACATGCCAGAAGAAGTCCTCTGTTTTCTCTGGTACCTCTGCTCGATCTACACTATTGGCATAACCTTTGATATTCAATGGTTATATCAATATATCAACA