TBGR-Browse-Bju-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
A03_LINE_41	Retrotransposons	LINE	LINE	83	33443734	33443816	+
A03_LINE_42	Retrotransposons	LINE	LINE	115	37278946	37279060	+
A03_LINE_43	Retrotransposons	LINE	LINE	91	38113580	38113670	+
A03_LINE_44	Retrotransposons	LINE	LINE	103	39786026	39786128	+
A04_LINE_45	Retrotransposons	LINE	LINE	96	666824	666919	+
A04_LINE_46	Retrotransposons	LINE	LINE	96	673656	673751	+
A04_LINE_47	Retrotransposons	LINE	LINE	83	1280903	1280985	+
A04_LINE_48	Retrotransposons	LINE	LINE	107	1924319	1924425	-
A04_LINE_49	Retrotransposons	LINE	LINE	83	3115889	3115971	-
A04_LINE_50	Retrotransposons	LINE	LINE	83	3198703	3198785	+
A04_LINE_51	Retrotransposons	LINE	LINE	92	9070691	9070782	+
A04_LINE_52	Retrotransposons	LINE	LINE	87	15462831	15462917	+
A04_LINE_53	Retrotransposons	LINE	LINE	83	18722499	18722581	-
A04_LINE_54	Retrotransposons	LINE	LINE	83	18753031	18753113	-
A04_LINE_55	Retrotransposons	LINE	LINE	90	19343936	19344025	-
A04_LINE_56	Retrotransposons	LINE	LINE	109	20711919	20712027	-
A04_LINE_57	Retrotransposons	LINE	LINE	104	21243987	21244090	-
A04_LINE_58	Retrotransposons	LINE	LINE	83	22984283	22984365	+
A04_LINE_59	Retrotransposons	LINE	LINE	109	23089932	23090040	+
A04_LINE_60	Retrotransposons	LINE	LINE	110	24714128	24714237	+

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_41

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

33443734

End:

33443816

Strand:

+

>A03_LINE_41

TCCGCTACTTGTTATCTATGTATCGTCTGTCAAAAATTGAAAATGGTAATAATAATTTAACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_42

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

115

Start:

37278946

End:

37279060

Strand:

+

>A03_LINE_42

TAGTTATGTTGTTTAATTTCATTTTTTTGCATTCCGCTACTTGTTAACTGTGTAACTTCTGTCACAAATTCGAAAATTGGTATAATAATTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_43

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

91

Start:

38113580

End:

38113670

Strand:

+

>A03_LINE_43

TGCTTCATCCGCTTCTCGTTTCCTTTGTATTTCTGTTAAAAATTGAAAATTTGGTAATAATATCTTAATATTTTTACCAAAAAATAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_44

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

103

Start:

39786026

End:

39786128

Strand:

+

>A03_LINE_44

TTTAGTTTTTTTGGTTTAGTTTTCCGATTCTTGTTTTCTCTGTAATTCTGTCAAAAAAAAAAATGGTAATAATATCTTAACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_45

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

96

Start:

666824

End:

666919

Strand:

+

>A04_LINE_45

TGTTGTTTACTTACCCGCTACTAGTCTTCTATTGTAATGTCTGTCAAAAACGAAAAATTGGTATAATATTTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_46

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

96

Start:

673656

End:

673751

Strand:

+

>A04_LINE_46

TGTTGTTTACTTACCCGCTACTAGTCTTCTATTGTAATGTCTGTCAAAAACGAAAAATTGGTATAATATTTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_47

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

1280903

End:

1280985

Strand:

+

>A04_LINE_47

TCTGTTACCTGTTTACTGTGTAACGTCTGTCTCAAATTCGAAAATTGGTATAATAATTTAATATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_48

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

1924319

End:

1924425

Strand:

-

>A04_LINE_48

TTTTTTTTCTTTTTGTAAATGTTAAATTTTATACCAATTTTTATTGTGACAGAAGTTACGTAGAACATAAGTAGCGAAATGAAAAAAAATATAAATCTAAAGCAACA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_49

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

3115889

End:

3115971

Strand:

-

>A04_LINE_49

TTTTTTTTTTTTTGGTAAAATGTTAGATATTATTATCAGATTTTTAATTTTGATAGAAGTTATAGAGATTTAAAATACAGAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_50

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

3198703

End:

3198785

Strand:

+

>A04_LINE_50

TCCGCTACTAGTAATCTTTATAACTTCTGTCTCAAATTTGAAAATTGGTATAATATTTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_51

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

92

Start:

9070691

End:

9070782

Strand:

+

>A04_LINE_51

CTTTCGTCCGCTTCTTGTCTCTATTGTATTTCTGTCGAAACCTTGAAAAACTTGGTAATAATATCTTTACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_52

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

87

Start:

15462831

End:

15462917

Strand:

+

>A04_LINE_52

TTCAATCTGCTACTTGTTTCCTGTGTAACTTCTGTTACAAAAGAAAATTTAGTATAAAATTTAACATTTACACCAAAAAAAAAAGAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_53

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

18722499

End:

18722581

Strand:

-

>A04_LINE_53

TTTTTTTTTTGGTGTAAATGTTAAATTTTATACCAAATTTTCTTTGCGACAGAAGTTACATAGGAAACAAGTAGCGGATCGAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_54

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

18753031

End:

18753113

Strand:

-

>A04_LINE_54

TTTTTTTTTTGGTGTAAATGTTAAATTTTATACCAAATTTTCTTTGCGACAGAAGTTACATAGGAAACAAGTAGCGGATCGAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_55

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

90

Start:

19343936

End:

19344025

Strand:

-

>A04_LINE_55

TTGTTTTTTTTTGGTAAAAATGTTAAATTTTTATACCATTTTCAGATCTTTTGACAGACTTTACACAGACACTAGTAACAGAGCAAAGTA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_56

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

20711919

End:

20712027

Strand:

-

>A04_LINE_56

TTTTTATTTTTTGGTAAAATGTTAAATTTTATACCATGAGTTTTCATTTTTTACAGACATCACAGGGAAACACTGGTAGCAGACAATGCAAGAAATTAAACTAACAACA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_57

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

21243987

End:

21244090

Strand:

-

>A04_LINE_57

TTTTTTTTTTTGGTAAAATATTAAATATTATACCAAATTTTTAGTTTTTGACAGAAATTACAAAAATAACAAATAGCAGAACGCAGAAAATAAACTAAACAATA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_58

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

22984283

End:

22984365

Strand:

+

>A04_LINE_58

TCCGCTACTTGTTTACACTGTAACGTCTGTCAAAAATTGAAAATCGGTAATAATATTTAACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_59

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

23089932

End:

23090040

Strand:

+

>A04_LINE_59

TGTTGTTTAGTTTAATTTCTTGCATCTTCTGCTCCTTGTATCCTTGTAGTTCTGTCTAAAACTTGAAAATGGTAATAAAGCTTTAACATTGTTACCCAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A04_LINE_60

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

110

Start:

24714128

End:

24714237

Strand:

+

>A04_LINE_60

TTGTGTTTAGTTTATTTATGTTTCATCCGCTACTAGTTTTCTGTGTGCTGTCTGTAAAAAAAATTGAAAACTTGGTATAATAATTTAATATTTTACCAAAAAAAAAAGAA